Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008919

Physical Location & Seq

Genomic Coordinates Reverse (-)

31629601 .. 31632422

Gene Structure 2822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G334700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1179 bp

ATGGCAGAAAGGGACCTAGAAGGGAAGTTGCTGGGTTCAGCTGATCTCTTGAATATCATCAACGGAGATCATGAAAATAGGGCAAAACCGGTCACAAGTTCGCTCCCGATGAACGGTGGAAATGGCATTTACAGCTACTCCAAGAACTCCTACTACCAGAAACAATCTGCTGGAGTTGAGAGAGAAAAAATCATTGAGGAAATAAGAGAGAAGCTTGATATGAAAACACTGTCTTCTGTTTCAAACACCATTCGTCTTGCAGACTTGGGATGTGCCACTGGACAAAACACTTTCATGACTATTCAAACTATACTAGAAGCTATGCAACGCAAATACAAATCCCAAATATCCCAATCATGCCCGCATGATTATGATGATCAAATGCCTGAGTTTCAAGTCTTCTTTAACGACCTAGAGTCAAATGACTTCAATACCCTCTTCACCTCTCTCCCACAAGACCGGCAATATTTGGCAGCCGGCGTGCCGGGTTCCTTCCACGGCCGTTTATTTCCCGAGTCGTCTATTCACTTTGTGCACACCTCATTTTCTCTCCACTGGCTCTCCAAGTTGCCAGAAGAGCTGCAGAACAAAGCCTCTCCGGCCTGGAACAAAGGAAGGATCCACTACACGAGCGCCCCAAATGAAGTAATTGAGGCTTATGCTTGCCAGTTTGCGGAGGACATGGAGAGGTTTTTGAATGCGAGGGCTAAAGAACTTGTGCCTCAAGGAATGATGGTGATGATCATGACTGGCATTCCCAAAGGGATGCCTTATTCTCAAATTCCAACGGGTATGTTGTACGATTCTATATCGTCTAGCCTCATGGATATGGCCAAAGAGGGAATAATTGAAGAAGGGGAAGTGGACTCGTTCAACTTGGCATTTTATGCAGCCTCCCCAGAGGAGATGGCTGGGATAGTGGAGAAAAATGGGTGTTTCGGGATAGAGAGAATGGAGCTGACAAACCCAGCAGCATGGATGAAAGGTCCCGTTGACATACCAACTCTGGTGACGCATGTAAGGGCGGCGATGGAGGGAATGTTTTCCAGACACTTTGGAAGTCAGGTCATGGATGAATTGTTCGGAAGATTGACCCATAAACTTCTAGACATTTCCGACCTCATCAACTCCACATGCCAGGAGAAAGTTCAGTTGTTTGCTGTTCTTAAGCGTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_7

Protein Analysis

393

Amino Acids

44.01

Weight (kDa)

5.31

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68040
fragaria_vesca	FvH4_4g33400 FvH4_4g33400 FvH4_4g33400
malus_domestica	MD13G1019200.v1.1 MD16G1016900.v1.1 MD16G1017000.v1.1 MD16G1017100.v1.1
prunus_persica	Prupe.1G334700_v2.0.a1 Prupe.1G334700_v2.0.a1 Prupe.1G334700_v2.0.a1
pyrus_communis	pycom13g01630
rosa_chinensis	RchiOBHm_Chr4g0442671
rosa_laevigata	RLG00000005993
rosa_multiflora	Rmu_ssc0000204.1_g000027
rosa_roxburghii	Rroxscaffold_5G00383480
rosa_rugosa	Rorug04G0342000 Rorug04G0342100
rosa_samantha	Rh4BG407500 Rh4CG422900 Rh4DG401600
rosa_wichuraiana	Rw4G034100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	362, 674, 1025
AclWI	GGATC	2 cut(s)	613, 626
AcoI	YGGCCR	2 cut(s)	499, 831
AcsI	RAATTY	1 cut(s)	780
AdeI	CACNNNGTG	1 cut(s)	532
AfaI	GTAC	1 cut(s)	800
AfiI	CCNNNNNNNGG	2 cut(s)	113, 673
AflII	CTTAAG	1 cut(s)	1166
AgeI	ACCGGT	1 cut(s)	88
AgsI	TTSAA	8 cut(s)	52, 243, 305, 395, 430, 697, 851, 874
AhdI	GACNNNNNGTC	1 cut(s)	415
AjnI	CCWGG	2 cut(s)	602, 1137
AloI	GAACNNNNNNTCC	2 cut(s)	1064, 1096
AluBI	AGCT	6 cut(s)	41, 135, 214, 320, 580, 958
AluI	AGCT	6 cut(s)	41, 135, 214, 320, 580, 958
Alw21I	GWGCWC	1 cut(s)	537
Alw44I	GTGCAC	1 cut(s)	533
AlwI	GGATC	2 cut(s)	613, 626
Ama87I	CYCGRG	1 cut(s)	512
AoxI	GGCC	3 cut(s)	499, 600, 831
ApaLI	GTGCAC	1 cut(s)	533
ApeKI	GCWGC	4 cut(s)	473, 580, 890, 971
ApoI	RAATTY	1 cut(s)	780
AsiGI	ACCGGT	1 cut(s)	88
Asp700I	GAANNNNTTC	1 cut(s)	1042
AspLEI	GCGC	1 cut(s)	635
AspS9I	GGNCC	2 cut(s)	13, 986
AsuC2I	CCSGG	1 cut(s)	486
AsuHPI	GGTGA	3 cut(s)	433, 748, 1021
AvaI	CYCGRG	1 cut(s)	512
AvaII	GGWCC	2 cut(s)	13, 986
BaeGI	GKGCMC	1 cut(s)	537
BalI	TGGCCA	1 cut(s)	833
BamHI	GGATCC	1 cut(s)	618
BauI	CACGAG	1 cut(s)	628
BbsI	GAAGAC	2 cut(s)	225, 391
Bbv12I	GWGCWC	1 cut(s)	537
BbvI	GCAGC	4 cut(s)	485, 567, 902, 983
BccI	CCATC	3 cut(s)	727, 901, 1024
BceAI	ACGGC	2 cut(s)	486, 514
BciT130I	CCWGG	2 cut(s)	604, 1139
BclI	TGATCA	2 cut(s)	376, 741
BcnI	CCSGG	1 cut(s)	486
BfaI	CTAG	5 cut(s)	17, 314, 413, 816, 1106
BfmI	CTRYAG	1 cut(s)	581
BfoI	RGCGCY	1 cut(s)	636
BfrI	CTTAAG	1 cut(s)	1166
BglI	GCCNNNNNGGC	1 cut(s)	599
BisI	GCNGC	5 cut(s)	474, 581, 891, 972, 1026
BlsI	GCNGC	5 cut(s)	475, 582, 892, 973, 1027
Bme1390I	CCNGG	3 cut(s)	486, 604, 1139
Bme18I	GGWCC	2 cut(s)	13, 986
BmeRI	GACNNNNNGTC	1 cut(s)	415
BmeT110I	CYCGRG	1 cut(s)	512
BmgT120I	GGNCC	2 cut(s)	13, 986
BmiI	GGNNCC	4 cut(s)	14, 490, 620, 988
BmrFI	CCNGG	3 cut(s)	486, 604, 1139
BmsI	GCATC	1 cut(s)	756
BpiI	GAAGAC	2 cut(s)	225, 391
BpmI	CTGGAG	1 cut(s)	192
BpuEI	CTTGAG	1 cut(s)	708
BpuMI	CCSGG	1 cut(s)	486
BsaJI	CCNNGG	1 cut(s)	496
BsaWI	WCCGGW	1 cut(s)	88
BsaXI	ACNNNNNCTCC	6 cut(s)	122, 152, 545, 575, 1025, 1055
Bsc4I	CCNNNNNNNGG	2 cut(s)	113, 673
Bse118I	RCCGGY	3 cut(s)	88, 459, 476
Bse1I	ACTGG	4 cut(s)	283, 560, 667, 754
BseBI	CCWGG	2 cut(s)	604, 1139
BseDI	CCNNGG	1 cut(s)	496
BseGI	GGATG	4 cut(s)	275, 771, 984, 1078
BseLI	CCNNNNNNNGG	2 cut(s)	113, 673
BseMII	CTCAG	1 cut(s)	378
BseNI	ACTGG	4 cut(s)	283, 560, 667, 754
BseRI	GAGGAG	1 cut(s)	917
BseSI	GKGCMC	1 cut(s)	537
BseX3I	CGGCCG	1 cut(s)	499
BseXI	GCAGC	4 cut(s)	485, 567, 902, 983
BseYI	CCCAGC	3 cut(s)	31, 911, 967
Bsh1285I	CGRYCG	1 cut(s)	502
BshFI	GGCC	3 cut(s)	501, 602, 833
BshTI	ACCGGT	1 cut(s)	88
BsiEI	CGRYCG	1 cut(s)	502
BsiHKAI	GWGCWC	1 cut(s)	537
BsiHKCI	CYCGRG	1 cut(s)	512
BsiSI	CCGG	5 cut(s)	89, 460, 477, 485, 599
BslFI	GGGAC	2 cut(s)	26, 972
BslI	CCNNNNNNNGG	2 cut(s)	113, 673
BsmFI	GGGAC	2 cut(s)	26, 972
BsmI	GAATGC	2 cut(s)	703, 753
BsnI	GGCC	3 cut(s)	501, 602, 833
BsoBI	CYCGRG	1 cut(s)	512
Bsp1286I	GDGCHC	1 cut(s)	537
Bsp143I	GATC	5 cut(s)	43, 67, 376, 618, 741
BspACI	CCGC	3 cut(s)	362, 674, 1025
BspANI	GGCC	3 cut(s)	501, 602, 833
BspCNI	CTCAG	1 cut(s)	379
BspHI	TCATGA	3 cut(s)	70, 294, 744
BspLI	GGNNCC	4 cut(s)	14, 490, 620, 988
BspMAI	CTGCAG	1 cut(s)	585
BspPI	GGATC	2 cut(s)	613, 626
BspQI	GCTCTTC	1 cut(s)	570
BspTI	CTTAAG	1 cut(s)	1166
BsrFI	RCCGGY	3 cut(s)	88, 459, 476
BsrI	ACTGG	4 cut(s)	283, 560, 667, 754
BssAI	RCCGGY	3 cut(s)	88, 459, 476
BssECI	CCNNGG	1 cut(s)	496
BssMI	GATC	5 cut(s)	43, 67, 376, 618, 741
BssSI	CACGAG	1 cut(s)	628
Bst2BI	CACGAG	1 cut(s)	628
Bst2UI	CCWGG	2 cut(s)	604, 1139
Bst4CI	ACNGT	2 cut(s)	116, 231
Bst6I	CTCTTC	2 cut(s)	443, 570
BstAFI	CTTAAG	1 cut(s)	1166
BstAPI	GCANNNNNTGC	1 cut(s)	887
BstC8I	GCNNGC	4 cut(s)	362, 478, 482, 664
BstDEI	CTNAG	1 cut(s)	387
BstDSI	CCRYGG	1 cut(s)	496
BstF5I	GGATG	4 cut(s)	275, 771, 984, 1078
BstH2I	RGCGCY	1 cut(s)	636
BstHHI	GCGC	1 cut(s)	635
BstKTI	GATC	5 cut(s)	46, 70, 379, 621, 744
BstMBI	GATC	5 cut(s)	43, 67, 376, 618, 741
BstMCI	CGRYCG	1 cut(s)	502
BstMWI	GCNNNNNNNGC	4 cut(s)	132, 577, 599, 887
BstNI	CCWGG	2 cut(s)	604, 1139
BstNSI	RCATGY	2 cut(s)	1019, 1137
BstSCI	CCNGG	3 cut(s)	484, 602, 1137
BstSFI	CTRYAG	1 cut(s)	581
BstSLI	GKGCMC	1 cut(s)	537
BstV1I	GCAGC	4 cut(s)	485, 567, 902, 983
BstV2I	GAAGAC	2 cut(s)	225, 391
BstX2I	RGATCY	1 cut(s)	618
BstXI	CCANNNNNNTGG	1 cut(s)	975
BstYI	RGATCY	1 cut(s)	618
BstZI	CGGCCG	1 cut(s)	499
BsuRI	GGCC	3 cut(s)	501, 602, 833
BtgI	CCRYGG	1 cut(s)	496
BtgZI	GCGATG	1 cut(s)	1043
BtsCI	GGATG	4 cut(s)	275, 771, 984, 1078
BtsIMutI	CAGTG	3 cut(s)	227, 276, 553
Cac8I	GCNNGC	4 cut(s)	362, 478, 482, 664
CciI	TCATGA	3 cut(s)	70, 294, 744
CfoI	GCGC	1 cut(s)	635
Cfr10I	RCCGGY	3 cut(s)	88, 459, 476
Cfr13I	GGNCC	2 cut(s)	13, 986
CseI	GACGC	1 cut(s)	1021
Csp6I	GTAC	1 cut(s)	799
CspAI	ACCGGT	1 cut(s)	88
CviQI	GTAC	1 cut(s)	799
DdeI	CTNAG	1 cut(s)	387
DpnI	GATC	5 cut(s)	45, 69, 378, 620, 743
DpnII	GATC	5 cut(s)	43, 67, 376, 618, 741
DraIII	CACNNNGTG	1 cut(s)	532
DriI	GACNNNNNGTC	1 cut(s)	415
EaeI	YGGCCR	2 cut(s)	499, 831
EagI	CGGCCG	1 cut(s)	499
Eam1104I	CTCTTC	2 cut(s)	443, 570
Eam1105I	GACNNNNNGTC	1 cut(s)	415
EarI	CTCTTC	2 cut(s)	443, 570
EclXI	CGGCCG	1 cut(s)	499
Eco47I	GGWCC	2 cut(s)	13, 986
Eco52I	CGGCCG	1 cut(s)	499
Eco88I	CYCGRG	1 cut(s)	512
EcoO109I	RGGNCCY	2 cut(s)	13, 986
EcoRII	CCWGG	2 cut(s)	602, 1137
FaqI	GGGAC	2 cut(s)	26, 972
FauI	CCCGC	1 cut(s)	369
FbaI	TGATCA	2 cut(s)	376, 741
Fnu4HI	GCNGC	5 cut(s)	474, 581, 891, 972, 1026
FokI	GGATG	4 cut(s)	282, 778, 991, 1085
Fsp4HI	GCNGC	5 cut(s)	474, 581, 891, 972, 1026
FspBI	CTAG	5 cut(s)	17, 314, 413, 816, 1106
GlaI	GCGC	1 cut(s)	634
GluI	GCNGC	5 cut(s)	474, 581, 891, 972, 1026
GsaI	CCCAGC	3 cut(s)	35, 915, 971
GsuI	CTGGAG	1 cut(s)	192
HaeII	RGCGCY	1 cut(s)	636
HaeIII	GGCC	3 cut(s)	501, 602, 833
HapII	CCGG	5 cut(s)	89, 460, 477, 485, 599
HgaI	GACGC	1 cut(s)	1021
HhaI	GCGC	1 cut(s)	635
Hin6I	GCGC	1 cut(s)	633
HinP1I	GCGC	1 cut(s)	633
HincII	GTYRAC	1 cut(s)	994
HindII	GTYRAC	1 cut(s)	994
HindIII	AAGCTT	1 cut(s)	212
HinfI	GANTC	4 cut(s)	416, 515, 803, 866
HpaII	CCGG	5 cut(s)	89, 460, 477, 485, 599
HphI	GGTGA	3 cut(s)	433, 748, 1021
Hpy166II	GTNNAC	3 cut(s)	535, 865, 994
Hpy188I	TCNGA	2 cut(s)	1085, 1117
Hpy188III	TCNNGA	9 cut(s)	49, 71, 106, 295, 512, 745, 940, 1047, 1106
Hpy8I	GTNNAC	3 cut(s)	535, 865, 994
HpyAV	CCTTC	4 cut(s)	14, 502, 609, 848
HpyCH4III	ACNGT	2 cut(s)	116, 231
HpyCH4V	TGCA	5 cut(s)	260, 325, 535, 583, 890
HpyF10VI	GCNNNNNNNGC	4 cut(s)	132, 577, 599, 887
HpyF3I	CTNAG	1 cut(s)	387
HspAI	GCGC	1 cut(s)	633
KroI	GCCGGC	1 cut(s)	476
KroNI	GCCGGC	1 cut(s)	478
Ksp22I	TGATCA	2 cut(s)	376, 741
Kzo9I	GATC	5 cut(s)	43, 67, 376, 618, 741
LguI	GCTCTTC	1 cut(s)	570
LmnI	GCTCC	2 cut(s)	108, 955
Lsp1109I	GCAGC	4 cut(s)	485, 567, 902, 983
LweI	GCATC	1 cut(s)	756
MaeI	CTAG	5 cut(s)	17, 314, 413, 816, 1106
MaeIII	GTNAC	2 cut(s)	91, 1009
MalI	GATC	5 cut(s)	45, 69, 378, 620, 743
MboI	GATC	5 cut(s)	43, 67, 376, 618, 741
MboII	GAAGA	6 cut(s)	225, 391, 430, 587, 863, 1098
MflI	RGATCY	1 cut(s)	618
MhlI	GDGCHC	1 cut(s)	537
MlsI	TGGCCA	1 cut(s)	833
MluCI	AATT	4 cut(s)	648, 780, 846, 1076
MluNI	TGGCCA	1 cut(s)	833
MlyI	GAGTC	3 cut(s)	425, 524, 860
MmeI	TCCRAC	2 cut(s)	809, 1140
Mox20I	TGGCCA	1 cut(s)	833
MroNI	GCCGGC	1 cut(s)	476
MroXI	GAANNNNTTC	1 cut(s)	1042
MscI	TGGCCA	1 cut(s)	833
MseI	TTAA	2 cut(s)	405, 1167
MslI	CAYNNNNRTG	3 cut(s)	293, 369, 827
Msp20I	TGGCCA	1 cut(s)	833
MspA1I	CMGCKG	1 cut(s)	41
MspCI	CTTAAG	1 cut(s)	1166
MspI	CCGG	5 cut(s)	89, 460, 477, 485, 599
MspR9I	CCNGG	3 cut(s)	486, 604, 1139
Mva1269I	GAATGC	2 cut(s)	703, 753
MvaI	CCWGG	2 cut(s)	604, 1139
MwoI	GCNNNNNNNGC	4 cut(s)	132, 577, 599, 887
NaeI	GCCGGC	1 cut(s)	478
NciI	CCSGG	1 cut(s)	486
NdeII	GATC	5 cut(s)	43, 67, 376, 618, 741
NgoMIV	GCCGGC	1 cut(s)	476
NlaIV	GGNNCC	4 cut(s)	14, 490, 620, 988
NmuCI	GTSAC	2 cut(s)	91, 1009
NspI	RCATGY	2 cut(s)	1019, 1137
PagI	TCATGA	3 cut(s)	70, 294, 744
PciSI	GCTCTTC	1 cut(s)	570
PctI	GAATGC	2 cut(s)	703, 753
PdiI	GCCGGC	1 cut(s)	478
PdmI	GAANNNNTTC	1 cut(s)	1042
PfeI	GAWTC	1 cut(s)	803
PinAI	ACCGGT	1 cut(s)	88
PkrI	GCNGC	5 cut(s)	475, 582, 892, 973, 1027
PleI	GAGTC	3 cut(s)	424, 523, 860
PpsI	GAGTC	3 cut(s)	424, 523, 860
PpuMI	RGGWCCY	2 cut(s)	13, 986
Psp5II	RGGWCCY	2 cut(s)	13, 986
Psp6I	CCWGG	2 cut(s)	602, 1137
PspFI	CCCAGC	3 cut(s)	31, 911, 967
PspGI	CCWGG	2 cut(s)	602, 1137
PspN4I	GGNNCC	4 cut(s)	14, 490, 620, 988
PspPI	GGNCC	2 cut(s)	13, 986
PspPPI	RGGWCCY	2 cut(s)	13, 986
PsrI	GAACNNNNNNTAC	2 cut(s)	137, 169
PstI	CTGCAG	1 cut(s)	585
PsuI	RGATCY	1 cut(s)	618
PvuII	CAGCTG	1 cut(s)	41
RsaI	GTAC	1 cut(s)	800
RsaNI	GTAC	1 cut(s)	799
RseI	CAYNNNNRTG	3 cut(s)	293, 369, 827
SapI	GCTCTTC	1 cut(s)	570
SaqAI	TTAA	2 cut(s)	405, 1167
SatI	GCNGC	5 cut(s)	474, 581, 891, 972, 1026
Sau3AI	GATC	5 cut(s)	43, 67, 376, 618, 741
Sau96I	GGNCC	2 cut(s)	13, 986
SchI	GAGTC	3 cut(s)	425, 524, 860
ScrFI	CCNGG	3 cut(s)	486, 604, 1139
SduI	GDGCHC	1 cut(s)	537
SfaNI	GCATC	1 cut(s)	756
SfcI	CTRYAG	1 cut(s)	581
SinI	GGWCC	2 cut(s)	13, 986
SmiMI	CAYNNNNRTG	3 cut(s)	293, 369, 827
SmlI	CTYRAG	2 cut(s)	723, 1166
SmoI	CTYRAG	2 cut(s)	723, 1166
Sse9I	AATT	4 cut(s)	648, 780, 846, 1076
SsiI	CCGC	3 cut(s)	362, 674, 1025
SspI	AATATT	1 cut(s)	467
SspMI	CTAG	5 cut(s)	17, 314, 413, 816, 1106
StyD4I	CCNGG	3 cut(s)	484, 602, 1137
TaaI	ACNGT	2 cut(s)	116, 231
TasI	AATT	4 cut(s)	648, 780, 846, 1076
TauI	GCSGC	1 cut(s)	1028
TfiI	GAWTC	1 cut(s)	803
Tru1I	TTAA	2 cut(s)	405, 1167
Tru9I	TTAA	2 cut(s)	405, 1167
TscAI	CASTG	3 cut(s)	234, 283, 560
TseFI	GTSAC	2 cut(s)	91, 1009
TseI	GCWGC	4 cut(s)	473, 580, 890, 971
Tsp45I	GTSAC	2 cut(s)	91, 1009
TspDTI	ATGAA	7 cut(s)	87, 125, 236, 283, 657, 995, 1089
TspGWI	ACGGA	1 cut(s)	78
TspRI	CASTG	3 cut(s)	234, 283, 560
Vha464I	CTTAAG	1 cut(s)	1166
VneI	GTGCAC	1 cut(s)	533
VpaK11BI	GGWCC	2 cut(s)	13, 986
XapI	RAATTY	1 cut(s)	780
XbaI	TCTAGA	1 cut(s)	1105
XceI	RCATGY	2 cut(s)	1019, 1137
XmnI	GAANNNNTTC	1 cut(s)	1042
XspI	CTAG	5 cut(s)	17, 314, 413, 816, 1106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.