AT1G69710

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007387
Physical Location & Seq
Forward (+)
26222004 .. 26226664
4661 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G69710.2

Sequence Viewer

Length: 3126 bp
ATGTGCATTTTGGAGTTGAGACTCTTTGCAGCAGCTTCAATGGCTGATTCCTTGAGAACTAGTTTCTCTGAGAGAGACGTTGAACAGGCCATTACGTCACTTAAGAAAGGGTCTTACTTGTTGAAATATGGACGTAGAGGGAAGCCTAAGTTTTGTCCATTCCAGCTCACAAGTGACGAGTCTGCATTAGTATGGTACTCTGGCAAAGAAGAGAAGCAGATTAAACTGAGTCAAGTCCTGAGAATTGTTCCTGGACAACGCACGCCTACATTTAAGAGATATCCACGCCCCGAGAAAGAGTATCAGTCATTCTCCCTCATATGTCCTGACAGGTCGTTGGATTTGATATGTAAAGACAAAGATGAAGCAGAAGTTTGGGTTGTTGGTTTGAAGTCATTGATTACTCGGGTAAAAGTCTCCAAATGGAAAACCACTATTAAACCTGAGATCACTTCAGCGGAATGTCCAACCCCTCATGCACGAAGAGTGTCTCCATTTGTAACAATTCTTGATCAAGTTATTCAACCCTCTAATGAGACTTCTACACAAACTCGGTTGGGAAAAGTGTTTTCTGACATTGTTGCAATAACTGCACCCCCCAGTAACAATAATCAAACAGAAGCCAGTGGCAACCTCTTCTGTCCATTTTCTCCGACTCCAGCAAACGTAGAAAATTCAAATTTACGATTCTCGACCAATGACCCATTTCGGCTCAGTCTATCTAGCGCTGTGAGCACCTCTAGCCATGGTTCATATCACGAAGACTTTGATGCCTTAGGTGATGTTTTTGTCTGGGGTGAATCTATAAGTGATGGTGTACTTAGCGGTACTGGAAATTCATTGAACTCCACGACAGAGGATGCCCTTTTACCAAAAGCATTAGAATCAACAATAGTACTTGATGCCCAAAACATTGCATGTGGTAAATGTCATGCGGTTTTAGTTACTAAACAAGGAGAGATCTTCAGCTGGGGTGAGGGAAAAGGTGGAAAGCTAGGACATGGCTTAGAAACAGACGCCCAAAAACCAAAGTTCATTAGTAGTGTCAGAGGATTGGGTTTCAAATCTTTAGCCTGCGGAGATTTCCATACATGCGCTATTACTCAATCTGGTGATCTTTACAGTTGGGGTGATGGCACTCATAACGTCGATTTGCTTGGGCATGGGAATGAATCCAGCTGCTGGATTCCAAAGAGAGTGACTGGTGACTTACAGGGACTGTATGTATCAGATGTCGCTTGCGGTCCCTGGCATACAGCAGTAGTTGCATCATCAGGCCAGTTGTTTACGTTTGGAGATGGAACTTTTGGTGCTCTGGGTCATGGAGACCGGAGAAGCACAAGTGTTCCACGTGAAGTTGAAAGCCTAATTGGACTAATAGTAACAAAGGTTGCTTGTGGCGTTTGGCATACAGCTGCAGTGGTAGAAGTGACAAATGAAGCATCTGAGGCAGAAGTTGACTCTTCACGCGGGCAAGTCTTCACATGGGGGGATGGCGAGAAAGGCCAGCTTGGTCATGGTGACAATGATACAAAACTACTTCCCGAGTGTGTAATTTCATTGACGAATGAAAATATCTGCCAAGTTGCCTGCGGACATAGTCTCACTGTTTCTCGTACATCCAGAGGACATGTGTATACAATGGGTAGCACGGCTTATGGACAGCTTGGTAATCCTACCGCCAAGGGAAATTTTCCTGAACGTGTTGAAGGAGACATTGTAGAGGCTTCTGTGGAGGAGATTGCATGTGGTTCTTATCATGTTGCAGTTTTGACATCTAAATCAGAAATTTACACATGGGGAAAGGGATTAAATGGCCAGTTAGGCCATGGAAACGTTGAGAACAAAAGAGAACCTGCGGTTGTGGGTTTTCTGAGAGAAAAACAAGTGAAGGCTATAACATGTGGATCAAACTTTACTGCTGTGATTTGTGTTCACAAATGGGTACCTGGCTCTGAACATTCTCTATGTGCTGGTTGCCGCAATCCCTTCAACTTTAGAAGAAAACGCCACAACTGTTACAACTGTGGTCTGGTATTTTGTAAAGTATGCAGTAGTAGGAAGTCTCTGCGAGCTGCTCTGGCACCTGACATGAACAAACCATATCGAGTGTGTTACGGATGTTTCACCAAGCTGAAAAAGTCGAGAGAATCATCTCCTTCTACGCCAACTTCACGGACCAGAAAACTTTTGAACATGCGGAAATCGACAGATGTTTCAGAAAGAGACAGCTTAACTCAAAAGTTCCTCTCAGTGAACGCCAGACTATCGTCTGCTGACTCTTCATTGCATTACAGTGAAAGAAGGCACCACAGACGAGACTTAAAACCGGAAGTAAATAACAGTAATGTCTTCCCTTCCATGAATGGCAGTTTACAGCCCGTTGGTTCGCCATTTTCCAAAGGATCAACAGCTTTGCCTAAAATCCCCAAGAATATGATGGTTAAAATTCCTGGTTCCGGAATGAGCTCTCGCACAACATCCCCAGTTTCAGTAAAGTCAACTAGTCCACGTCGATCTTATGAAGTAGCAGCTGCAGAATCTAAACAATTAAAAGACAGTTTTAATCAAGATATGGCTGGTCTAAAGGAACAGGTAGAACAACTTGCTTCGAAAGCTCACCAACTTGAAGAGGAACTCGAAAAAACCAAAAGGCAGTTAAAAGTTGTGACTGCAATGGCAGCAGATGAAGCAGAGGAAAATAGATCTGCAAAGGAGGTTATAAGATCTCTAACCACTCAGTTGAAGGAAATGGCAGAAAAACAATCTCAAAAGGATAGTATTAGCACTAACTCAAAGCACACAGACAAAGAGAAATCAGAGACTGTAACTCAGACTAGTAACCAAACACATATAAGAAGCATGGTTTCTCAAGATAGTCAAAATGAGAACAATCTAACAAGTAAGAGCTTCGCTAATGGGCATAGGAAACAGAATGATAAACCAGAAAAGGTTGTGCAAGACGAACCAGGAGTGTATTTAACGTTGTTGTCTTTACCTGGTGGTGGTACTGAACTCAAGCGTGTTCGCTTCAGCCGGAAACAATTTACCGAAGAACAAGCGGAGAAGTGGTGGGGTGAAAATGGAGCTAAAGTGTGTGAGCGCCACAACATTCTAGTTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BRX BRX_N FYVE Mcp5_PH RCC1

Protein Analysis

1041

Amino Acids

114.14

Weight (kDa)

8.79

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_12 PF16457 15 - 121 4.2e-07 Pleckstrin homology domain
WD40_RLD PF25390 248 - 629 1.2e-78 RCC1-like domain
RCC1 PF00415 305 - 354 2e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 342 - 368 1.1e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 357 - 409 1.5e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 396 - 424 9.8e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 412 - 461 1.6e-14 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 478 - 524 2.1e-14 Regulator of chromosome condensation (RCC1) repeat
Alsin_RLD PF25384 478 - 587 8.1e-07 Alsin RCC1-like domain
RCC1 PF00415 530 - 578 4.2e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 566 - 594 4.7e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 583 - 630 2.1e-12 Regulator of chromosome condensation (RCC1) repeat
FYVE PF01363 634 - 700 5.3e-15 FYVE zinc finger
BRX_N PF13713 883 - 908 4.5e-08 Transcription factor BRX N-terminal domain
BRX PF08381 969 - 1023 1.7e-24 Transcription factor regulating root and shoot growth via Pin3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2723
Acc36I ACCTGC 1 cut(s) 1864
Acc65I GGTACC 1 cut(s) 1945
AccB1I GGYRCC 3 cut(s) 1945, 2083, 2307
AccB7I CCANNNNNTGG 1 cut(s) 1182
AccI GTMKAC 1 cut(s) 1637
AccII CGCG 1 cut(s) 1470
AccIII TCCGGA 1 cut(s) 2459
AclI AACGTT 2 cut(s) 1836, 2984
AclWI GGATC 2 cut(s) 1915, 2413
AcoI YGGCCR 1 cut(s) 1816
AcsI RAATTY 6 cut(s) 673, 679, 835, 1690, 1788, 2448
AcuI CTGAAG 3 cut(s) 438, 949, 3016
AcvI CACGTG 1 cut(s) 1352
AcyI GRCGYC 1 cut(s) 1017
AfaI GTAC 7 cut(s) 197, 819, 829, 897, 1618, 1947, 3010
AfeI AGCGCT 1 cut(s) 727
AfiI CCNNNNNNNGG 3 cut(s) 1182, 2459, 3005
AflII CTTAAG 1 cut(s) 101
AflIII ACRYGT 3 cut(s) 1630, 1702, 1901
AhlI ACTAGT 3 cut(s) 59, 2504, 2837
AjiI CACGTC 1 cut(s) 2513
AjnI CCWGG 6 cut(s) 250, 1247, 1948, 2452, 2968, 2998
AjuI GAANNNNNNNTTGG 2 cut(s) 1353, 1385
Alw21I GWGCWC 3 cut(s) 737, 1315, 2471
AlwI GGATC 2 cut(s) 1915, 2413
AlwNI CAGNNNCTG 3 cut(s) 1182, 1219, 2825
Ama87I CYCGRG 3 cut(s) 290, 405, 1544
Aor13HI TCCGGA 1 cut(s) 2459
Aor51HI AGCGCT 1 cut(s) 727
AoxI GGCC 5 cut(s) 87, 1276, 1504, 1816, 1825
ApeKI GCWGC 8 cut(s) 29, 32, 1179, 1415, 2075, 2531, 2534, 2681
ApoI RAATTY 6 cut(s) 673, 679, 835, 1690, 1788, 2448
Asp718I GGTACC 1 cut(s) 1945
AspLEI GCGC 3 cut(s) 728, 1097, 3105
AspS9I GGNCC 2 cut(s) 1244, 2178
AsuII TTCGAA 1 cut(s) 2612
AvaI CYCGRG 3 cut(s) 290, 405, 1544
AvaII GGWCC 2 cut(s) 1244, 2178
AxyI CCTNAGG 1 cut(s) 775
BalI TGGCCA 1 cut(s) 1818
BanI GGYRCC 3 cut(s) 1945, 2083, 2307
BanII GRGCYC 1 cut(s) 2471
BbrPI CACGTG 1 cut(s) 1352
BbsI GAAGAC 3 cut(s) 768, 1471, 2344
Bbv12I GWGCWC 3 cut(s) 737, 1315, 2471
BbvI GCAGC 8 cut(s) 41, 44, 1166, 1402, 2062, 2521, 2543, 2693
BccI CCATC 5 cut(s) 806, 1127, 1292, 1487, 2434
BceAI ACGGC 1 cut(s) 1668
BciT130I CCWGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
BclI TGATCA 1 cut(s) 511
BcuI ACTAGT 3 cut(s) 59, 2504, 2837
BfaI CTAG 7 cut(s) 60, 723, 741, 995, 2505, 2838, 3116
BfmI CTRYAG 2 cut(s) 1416, 2535
BfoI RGCGCY 2 cut(s) 729, 3106
BfrI CTTAAG 1 cut(s) 101
BfuAI ACCTGC 1 cut(s) 1864
BglI GCCNNNNNGGC 1 cut(s) 1824
BglII AGATCT 3 cut(s) 960, 2705, 2726
BisI GCNGC 9 cut(s) 30, 33, 1180, 1416, 1981, 2076, 2532, 2535, 2682
BlsI GCNGC 9 cut(s) 31, 34, 1181, 1417, 1982, 2077, 2533, 2536, 2683
BmcAI AGTACT 1 cut(s) 897
Bme1390I CCNGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
Bme18I GGWCC 2 cut(s) 1244, 2178
BmeT110I CYCGRG 3 cut(s) 290, 405, 1544
BmgBI CACGTC 1 cut(s) 2513
BmgT120I GGNCC 2 cut(s) 1244, 2178
BmiI GGNNCC 5 cut(s) 1246, 1947, 2085, 2309, 2458
BmrFI CCNGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
BmrI ACTGGG 2 cut(s) 594, 2480
BmsI GCATC 5 cut(s) 760, 850, 892, 1277, 1451
BmuI ACTGGG 2 cut(s) 594, 2480
BoxI GACNNNNGTC 1 cut(s) 2269
BpiI GAAGAC 3 cut(s) 768, 1471, 2344
BpmI CTGGAG 1 cut(s) 642
Bpu14I TTCGAA 1 cut(s) 2612
BpuEI CTTGAG 3 cut(s) 73, 2856, 3002
BsaAI YACGTR 1 cut(s) 1352
BsaHI GRCGYC 1 cut(s) 1017
BsaI GGTCTC 1 cut(s) 1320
BsaJI CCNNGG 4 cut(s) 745, 1247, 1683, 1828
BsaWI WCCGGW 3 cut(s) 1329, 2329, 2459
BsaXI ACNNNNNCTCC 6 cut(s) 1704, 1734, 3056, 3078, 3086, 3108
Bsc4I CCNNNNNNNGG 3 cut(s) 1182, 2459, 3005
Bse1I ACTGG 7 cut(s) 600, 624, 835, 1207, 1279, 1819, 2486
Bse21I CCTNAGG 1 cut(s) 775
Bse3DI GCAATG 3 cut(s) 912, 2285, 2682
BseAI TCCGGA 1 cut(s) 2459
BseBI CCWGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
BseDI CCNNGG 4 cut(s) 745, 1247, 1683, 1828
BseGI GGATG 5 cut(s) 865, 1498, 1619, 2126, 2480
BseLI CCNNNNNNNGG 3 cut(s) 1182, 2459, 3005
BseMI GCAATG 3 cut(s) 912, 2285, 2682
BseNI ACTGG 7 cut(s) 600, 624, 835, 1207, 1279, 1819, 2486
BseRI GAGGAG 1 cut(s) 1751
BseXI GCAGC 8 cut(s) 41, 44, 1166, 1402, 2062, 2521, 2543, 2693
BseYI CCCAGC 1 cut(s) 969
BsgI GTGCAG 1 cut(s) 576
Bsh1236I CGCG 1 cut(s) 1470
BshFI GGCC 5 cut(s) 89, 1278, 1506, 1818, 1827
BshNI GGYRCC 3 cut(s) 1945, 2083, 2307
BsiHKAI GWGCWC 3 cut(s) 737, 1315, 2471
BsiHKCI CYCGRG 3 cut(s) 290, 405, 1544
BsiSI CCGG 4 cut(s) 1330, 2330, 2460, 3037
BslFI GGGAC 2 cut(s) 1230, 1230
BslI CCNNNNNNNGG 3 cut(s) 1182, 2459, 3005
BsmBI CGTCTC 1 cut(s) 69
BsmFI GGGAC 2 cut(s) 1230, 1230
BsnI GGCC 5 cut(s) 89, 1278, 1506, 1818, 1827
Bso31I GGTCTC 1 cut(s) 1320
BsoBI CYCGRG 3 cut(s) 290, 405, 1544
Bsp119I TTCGAA 1 cut(s) 2612
Bsp1286I GDGCHC 3 cut(s) 737, 1315, 2471
Bsp13I TCCGGA 1 cut(s) 2459
Bsp143I GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
Bsp19I CCATGG 2 cut(s) 745, 1828
BspANI GGCC 5 cut(s) 89, 1278, 1506, 1818, 1827
BspEI TCCGGA 1 cut(s) 2459
BspFNI CGCG 1 cut(s) 1470
BspLI GGNNCC 5 cut(s) 1246, 1947, 2085, 2309, 2458
BspMAI CTGCAG 2 cut(s) 1420, 2539
BspMI ACCTGC 1 cut(s) 1864
BspPI GGATC 2 cut(s) 1915, 2413
BspT104I TTCGAA 1 cut(s) 2612
BspT107I GGYRCC 3 cut(s) 1945, 2083, 2307
BspTI CTTAAG 1 cut(s) 101
BspTNI GGTCTC 1 cut(s) 1320
BsrDI GCAATG 3 cut(s) 912, 2285, 2682
BsrI ACTGG 7 cut(s) 600, 624, 835, 1207, 1279, 1819, 2486
BssECI CCNNGG 4 cut(s) 745, 1247, 1683, 1828
BssMI GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
BssNAI GTATAC 1 cut(s) 1638
BssNI GRCGYC 1 cut(s) 1017
BssT1I CCWWGG 3 cut(s) 745, 1683, 1828
Bst1107I GTATAC 1 cut(s) 1638
Bst2UI CCWGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
Bst4CI ACNGT 9 cut(s) 1124, 1221, 1609, 2018, 2027, 2297, 2345, 2561, 2827
Bst6I CTCTTC 6 cut(s) 204, 478, 641, 1468, 2287, 2625
BstACI GRCGYC 1 cut(s) 1017
BstAFI CTTAAG 1 cut(s) 101
BstAPI GCANNNNNTGC 2 cut(s) 590, 1265
BstBAI YACGTR 1 cut(s) 1352
BstBI TTCGAA 1 cut(s) 2612
BstC8I GCNNGC 7 cut(s) 263, 1075, 1240, 1472, 1508, 1591, 2073
BstDSI CCRYGG 2 cut(s) 745, 1828
BstF5I GGATG 5 cut(s) 865, 1498, 1619, 2126, 2480
BstFNI CGCG 1 cut(s) 1470
BstH2I RGCGCY 2 cut(s) 729, 3106
BstHHI GCGC 3 cut(s) 728, 1097, 3105
BstKTI GATC 9 cut(s) 450, 514, 963, 1117, 1910, 2408, 2519, 2708, 2729
BstMBI GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
BstNI CCWGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
BstNSI RCATGY 6 cut(s) 921, 1095, 1634, 1749, 1905, 2200
BstPAI GACNNNNGTC 1 cut(s) 2269
BstSCI CCNGG 6 cut(s) 250, 1247, 1948, 2452, 2968, 2998
BstSFI CTRYAG 2 cut(s) 1416, 2535
BstUI CGCG 1 cut(s) 1470
BstV1I GCAGC 8 cut(s) 41, 44, 1166, 1402, 2062, 2521, 2543, 2693
BstV2I GAAGAC 3 cut(s) 768, 1471, 2344
BstX2I RGATCY 3 cut(s) 960, 2705, 2726
BstYI RGATCY 3 cut(s) 960, 2705, 2726
BstZ17I GTATAC 1 cut(s) 1638
Bsu36I CCTNAGG 1 cut(s) 775
BsuRI GGCC 5 cut(s) 89, 1278, 1506, 1818, 1827
BtgI CCRYGG 2 cut(s) 745, 1828
BtrI CACGTC 1 cut(s) 2513
BtsCI GGATG 5 cut(s) 865, 1498, 1619, 2126, 2480
BtsI GCAGTG 1 cut(s) 1425
BtsIMutI CAGTG 5 cut(s) 631, 1425, 1605, 2259, 2302
BveI ACCTGC 1 cut(s) 1864
Cac8I GCNNGC 7 cut(s) 263, 1075, 1240, 1472, 1508, 1591, 2073
CaiI CAGNNNCTG 3 cut(s) 1182, 1219, 2825
CfoI GCGC 3 cut(s) 728, 1097, 3105
Cfr13I GGNCC 2 cut(s) 1244, 2178
CseI GACGC 1 cut(s) 1025
CsiI ACCWGGT 1 cut(s) 2998
Csp6I GTAC 7 cut(s) 196, 818, 828, 896, 1617, 1946, 3009
CviQI GTAC 7 cut(s) 196, 818, 828, 896, 1617, 1946, 3009
DpnI GATC 9 cut(s) 449, 513, 962, 1116, 1909, 2407, 2518, 2707, 2728
DpnII GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
EaeI YGGCCR 1 cut(s) 1816
Eam1104I CTCTTC 6 cut(s) 204, 478, 641, 1468, 2287, 2625
EarI CTCTTC 6 cut(s) 204, 478, 641, 1468, 2287, 2625
Ecl136II GAGCTC 1 cut(s) 2469
Eco130I CCWWGG 3 cut(s) 745, 1683, 1828
Eco24I GRGCYC 1 cut(s) 2471
Eco31I GGTCTC 1 cut(s) 1320
Eco32I GATATC 1 cut(s) 281
Eco47I GGWCC 2 cut(s) 1244, 2178
Eco47III AGCGCT 1 cut(s) 727
Eco53kI GAGCTC 1 cut(s) 2469
Eco57I CTGAAG 3 cut(s) 438, 949, 3016
Eco72I CACGTG 1 cut(s) 1352
Eco81I CCTNAGG 1 cut(s) 775
Eco88I CYCGRG 3 cut(s) 290, 405, 1544
EcoICRI GAGCTC 1 cut(s) 2469
EcoRII CCWGG 6 cut(s) 250, 1247, 1948, 2452, 2968, 2998
EcoRV GATATC 1 cut(s) 281
EcoT14I CCWWGG 3 cut(s) 745, 1683, 1828
EcoT38I GRGCYC 1 cut(s) 2471
ErhI CCWWGG 3 cut(s) 745, 1683, 1828
Esp3I CGTCTC 1 cut(s) 69
FalI AAGNNNNNCTT 2 cut(s) 1494, 1526
FaqI GGGAC 2 cut(s) 1230, 1230
FauI CCCGC 1 cut(s) 1463
FauNDI CATATG 1 cut(s) 320
FbaI TGATCA 1 cut(s) 511
FblI GTMKAC 1 cut(s) 1637
Fnu4HI GCNGC 9 cut(s) 30, 33, 1180, 1416, 1981, 2076, 2532, 2535, 2682
FokI GGATG 5 cut(s) 872, 1505, 1606, 2133, 2467
FriOI GRGCYC 1 cut(s) 2471
Fsp4HI GCNGC 9 cut(s) 30, 33, 1180, 1416, 1981, 2076, 2532, 2535, 2682
FspBI CTAG 7 cut(s) 60, 723, 741, 995, 2505, 2838, 3116
GlaI GCGC 3 cut(s) 727, 1096, 3104
GluI GCNGC 9 cut(s) 30, 33, 1180, 1416, 1981, 2076, 2532, 2535, 2682
GsaI CCCAGC 1 cut(s) 973
GsuI CTGGAG 1 cut(s) 642
HaeII RGCGCY 2 cut(s) 729, 3106
HaeIII GGCC 5 cut(s) 89, 1278, 1506, 1818, 1827
HapII CCGG 4 cut(s) 1330, 2330, 2460, 3037
HgaI GACGC 1 cut(s) 1025
HhaI GCGC 3 cut(s) 728, 1097, 3105
Hin1I GRCGYC 1 cut(s) 1017
Hin6I GCGC 3 cut(s) 726, 1095, 3103
HinP1I GCGC 3 cut(s) 726, 1095, 3103
HincII GTYRAC 2 cut(s) 1459, 2502
HindII GTYRAC 2 cut(s) 1459, 2502
HpaII CCGG 4 cut(s) 1330, 2330, 2460, 3037
Hpy166II GTNNAC 9 cut(s) 818, 1287, 1459, 1638, 1936, 2257, 2375, 2502, 2510
Hpy8I GTNNAC 9 cut(s) 818, 1287, 1459, 1638, 1936, 2257, 2375, 2502, 2510
Hpy99I CGWCG 2 cut(s) 1151, 2517
HpyAV CCTTC 7 cut(s) 1703, 1885, 1999, 2169, 2298, 2367, 2740
HpyCH4III ACNGT 9 cut(s) 1124, 1221, 1609, 2018, 2027, 2297, 2345, 2561, 2827
Hsp92I GRCGYC 1 cut(s) 1017
HspAI GCGC 3 cut(s) 726, 1095, 3103
Kpn2I TCCGGA 1 cut(s) 2459
KpnI GGTACC 1 cut(s) 1949
Ksp22I TGATCA 1 cut(s) 511
Kzo9I GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
LmnI GCTCC 1 cut(s) 3086
Lsp1109I GCAGC 8 cut(s) 41, 44, 1166, 1402, 2062, 2521, 2543, 2693
LweI GCATC 5 cut(s) 760, 850, 892, 1277, 1451
MabI ACCWGGT 1 cut(s) 2998
MaeI CTAG 7 cut(s) 60, 723, 741, 995, 2505, 2838, 3116
MalI GATC 9 cut(s) 449, 513, 962, 1116, 1909, 2407, 2518, 2707, 2728
MboI GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
MflI RGATCY 3 cut(s) 960, 2705, 2726
MhlI GDGCHC 3 cut(s) 737, 1315, 2471
MlsI TGGCCA 1 cut(s) 1818
MluNI TGGCCA 1 cut(s) 1818
MlyI GAGTC 6 cut(s) 15, 188, 238, 649, 1454, 2273
MmeI TCCRAC 3 cut(s) 318, 491, 677
Mox20I TGGCCA 1 cut(s) 1818
MroI TCCGGA 1 cut(s) 2459
MscI TGGCCA 1 cut(s) 1818
MslI CAYNNNNRTG 3 cut(s) 190, 1167, 2295
Msp20I TGGCCA 1 cut(s) 1818
MspA1I CMGCKG 5 cut(s) 458, 969, 1179, 1415, 2534
MspCI CTTAAG 1 cut(s) 101
MspI CCGG 4 cut(s) 1330, 2330, 2460, 3037
MspR9I CCNGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
MvaI CCWGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
MvnI CGCG 1 cut(s) 1470
NcoI CCATGG 2 cut(s) 745, 1828
NdeI CATATG 1 cut(s) 320
NdeII GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
NlaIV GGNNCC 5 cut(s) 1246, 1947, 2085, 2309, 2458
NmuCI GTSAC 7 cut(s) 96, 173, 1198, 1205, 1429, 1520, 2668
NspI RCATGY 6 cut(s) 921, 1095, 1634, 1749, 1905, 2200
NspV TTCGAA 1 cut(s) 2612
PciI ACATGT 2 cut(s) 1630, 1901
PfeI GAWTC 8 cut(s) 47, 687, 800, 884, 1172, 1186, 2150, 2540
PflFI GACNNNGTC 1 cut(s) 1599
PflMI CCANNNNNTGG 1 cut(s) 1182
PfoI TCCNGGA 1 cut(s) 250
PkrI GCNGC 9 cut(s) 31, 34, 1181, 1417, 1982, 2077, 2533, 2536, 2683
PleI GAGTC 6 cut(s) 15, 187, 237, 649, 1454, 2273
PmaCI CACGTG 1 cut(s) 1352
PmlI CACGTG 1 cut(s) 1352
PpsI GAGTC 6 cut(s) 15, 187, 237, 649, 1454, 2273
Ppu21I YACGTR 1 cut(s) 1352
PscI ACATGT 2 cut(s) 1630, 1901
PshAI GACNNNNGTC 1 cut(s) 2269
PsiI TTATAA 1 cut(s) 2723
Psp124BI GAGCTC 1 cut(s) 2471
Psp1406I AACGTT 2 cut(s) 1836, 2984
Psp6I CCWGG 6 cut(s) 250, 1247, 1948, 2452, 2968, 2998
PspCI CACGTG 1 cut(s) 1352
PspFI CCCAGC 1 cut(s) 969
PspGI CCWGG 6 cut(s) 250, 1247, 1948, 2452, 2968, 2998
PspN4I GGNNCC 5 cut(s) 1246, 1947, 2085, 2309, 2458
PspPI GGNCC 2 cut(s) 1244, 2178
PstI CTGCAG 2 cut(s) 1420, 2539
PstNI CAGNNNCTG 3 cut(s) 1182, 1219, 2825
PsuI RGATCY 3 cut(s) 960, 2705, 2726
PsyI GACNNNGTC 1 cut(s) 1599
PvuII CAGCTG 4 cut(s) 969, 1179, 1415, 2534
RsaI GTAC 7 cut(s) 197, 819, 829, 897, 1618, 1947, 3010
RsaNI GTAC 7 cut(s) 196, 818, 828, 896, 1617, 1946, 3009
RseI CAYNNNNRTG 3 cut(s) 190, 1167, 2295
SacI GAGCTC 1 cut(s) 2471
SatI GCNGC 9 cut(s) 30, 33, 1180, 1416, 1981, 2076, 2532, 2535, 2682
Sau3AI GATC 9 cut(s) 447, 511, 960, 1114, 1907, 2405, 2516, 2705, 2726
Sau96I GGNCC 2 cut(s) 1244, 2178
ScaI AGTACT 1 cut(s) 897
SchI GAGTC 6 cut(s) 15, 188, 238, 649, 1454, 2273
ScrFI CCNGG 6 cut(s) 252, 1249, 1950, 2454, 2970, 3000
SduI GDGCHC 3 cut(s) 737, 1315, 2471
SexAI ACCWGGT 1 cut(s) 2998
SfaNI GCATC 5 cut(s) 760, 850, 892, 1277, 1451
SfcI CTRYAG 2 cut(s) 1416, 2535
SfiI GGCCNNNNNGGCC 1 cut(s) 1824
SfuI TTCGAA 1 cut(s) 2612
SinI GGWCC 2 cut(s) 1244, 2178
SmiMI CAYNNNNRTG 3 cut(s) 190, 1167, 2295
SmlI CTYRAG 4 cut(s) 52, 101, 2871, 3017
SmoI CTYRAG 4 cut(s) 52, 101, 2871, 3017
SpeI ACTAGT 3 cut(s) 59, 2504, 2837
SspMI CTAG 7 cut(s) 60, 723, 741, 995, 2505, 2838, 3116
SstI GAGCTC 1 cut(s) 2471
StyD4I CCNGG 6 cut(s) 250, 1247, 1948, 2452, 2968, 2998
StyI CCWWGG 3 cut(s) 745, 1683, 1828
TaaI ACNGT 9 cut(s) 1124, 1221, 1609, 2018, 2027, 2297, 2345, 2561, 2827
TaqI TCGA 8 cut(s) 692, 1149, 2107, 2144, 2207, 2515, 2612, 2640
TatI WGTACW 2 cut(s) 817, 895
TauI GCSGC 1 cut(s) 1983
TfiI GAWTC 8 cut(s) 47, 687, 800, 884, 1172, 1186, 2150, 2540
TscAI CASTG 5 cut(s) 631, 1425, 1612, 2259, 2302
TseFI GTSAC 7 cut(s) 96, 173, 1198, 1205, 1429, 1520, 2668
TseI GCWGC 8 cut(s) 29, 32, 1179, 1415, 2075, 2531, 2534, 2681
Tsp45I GTSAC 7 cut(s) 96, 173, 1198, 1205, 1429, 1520, 2668
TspGWI ACGGA 2 cut(s) 2133, 2191
TspRI CASTG 5 cut(s) 631, 1425, 1612, 2259, 2302
Tth111I GACNNNGTC 1 cut(s) 1599
Van91I CCANNNNNTGG 1 cut(s) 1182
Vha464I CTTAAG 1 cut(s) 101
VpaK11BI GGWCC 2 cut(s) 1244, 2178
XapI RAATTY 6 cut(s) 673, 679, 835, 1690, 1788, 2448
XceI RCATGY 6 cut(s) 921, 1095, 1634, 1749, 1905, 2200
XcmI CCANNNNNNNNNTGG 3 cut(s) 1514, 1826, 2437
XmiI GTMKAC 1 cut(s) 1637
XspI CTAG 7 cut(s) 60, 723, 741, 995, 2505, 2838, 3116
ZrmI AGTACT 1 cut(s) 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.