Prupe.1G272300_v2.0.a1

Transcription factor BRX N-terminal domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
27901035 .. 27907994
6960 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G272300.1

Sequence Viewer

Length: 3096 bp
ATGGCTAGTCCTCAGAGAAGCGGTCCTGTCGAAAGGGATATCGAGCAGGCCATAACAGCACTTAAGAAAGGTGCAACTTTGTTAAAATATGGGCGCAGAGGGAAGCCAAAGTTCTGTCCATTCCGGCTTTCTAATGATGAGTCTTTATTGATATGGTACTCTGGCAAAGAAGAAAAACACCTTAAACTCAGTCATGTTTCAACAATTATTCCTGGCCAGCGTACAGCAATATTTCAGCGGTATCCACGACCTGAAAAGGAGTATCAATCATTTTCACTCCTATACAACGATAGGTCCTTGGACTTGATATGTAAAGACAAGGATGAAGCTGAAGTTTGGTTTGTTGGTCTTAAAGCACTAATGAGTCGAGGTAACTACCGAAACTGGAGAAGTGAATCAAGATTGGACAGCACATCACTAGATAGTCCCCATACTCGTACTCGACGAAGTTCTCCATCAGTCACACCATTTGATGTAGGAGATACTGAGGGAGTGCCTTTGGAGAATATCCCACAGAGTAGATTAGGAAAGGCATTTGCTGACATAATTACATATACTGCAACCCCCAAGAGTGCCACTCAAATTGAATCAGTTTCTAATTCCTCATTATCACCTGCATCTGTAGATAATTCAAATGGTCGAAGTTCTGCTGCAGCTGAAGGTTTTCGAGTTAGTTTATCTAGTGCTGTAAGCTCGTCAAGTCAAGGTTCTTGTCAAGATGATTTTGATGCATTAGGAGATGTTTTCATTTGGGGTGAAGGTATTGGTGGTGGAGTACTAGGAGGTGGTGTAGATAGAGTAGGCTGTTCATATGGTTTCAGGACAGATGCTCTTCTGCCTAAGGTACTGGAATCAACCGTGGTCGTAGATGTTCATGGAATTGCATGTGGCGCCAGACATGCGGTGCTGGTCACCAAGCAAGGTGAAATCTTCAGTTGGGGAGAGGAGTCAGGAGGCAGGCTTGGGCATGGGGTAGAGGCAGATGTTTCCCACCCAAAGCTCGTTGACACTCTTAGTGGCATTAATGTTGAATTAGTGGCATGCGGGGAATATCACACTTGTGCTGTTACACTTTCTGGAGATCTTTATACATGGGGTGATGGTACTCATAATTTTGGTCTGCTTGGGCACGGAAGTGAAGTTAGTCATTGGATACCCAAAAAGGTAAGTGGTCACATGGATGGTATACATGTATCCTATATCGCTTGCGGACCATGGCATACAGCTGCTGTGACATCAGCTGGCCAGTTATTTACCTTTGGGGACGGTTCTTTCGGTGCCTTGGGCCATGGGGATCATAGTAGCACAAATACTCCACGGGAGGTGGAAACTTTGGGAGGGCTAAGAACAACAAGGGTTGCTTGCGGTGTTTGGCACACTGCTGCAGTTGTTGAAGTAACAAATGAATTATCTAGTCCTGAGACTTCTAGTAACTCTTCATCTGGAAATCTGTACACCTGGGGGGATGGAGATACAGGCCAACTTGGACATGGTGATCAAGAATCTAGACTAGTTCCTGAATGCGTAGCTGCATTGGTTGATAAACATATTTGTCAGGTAGCATGTGGCCATAATCTCACAGTTGCCCTTACAACCTCAGGACAAGTATATACAATGGGAAGTGCTGCTTATGGACAGCTTGGCAGTCCTTTAGCTGATGGGAAAGTTCCCACTCTGGTTGAGGGTAAAATTGCAGATAGTTTTGTTGAAGATATTGCCTGTGGTTCTTATCATGTTGCAGTTTTGACTTCCAAGACAGAGGTTTTTACTTGGGGAAGGGGTTCAAATGGGCAACTAGGCCATGGAGACAATGATCATAGAAATACACCTACCCTTGTAGATTGTATAAAGGATAAGCAAGTAAAGAGTGTAACATGTGGTCCAAATATTACAGCGGTCATTTGTCTTCATAAATGGGCATCTAGTGCTGACCATTCTGTTTGCTCTGGTTGTCATAATCCCTTTGGTTTCAGAAGAAAACGTCATAATTGTTACAATTGTGGACTAGTCTTCTGCAAAGCATGCAGCAGCAAGAAATCTCTGAAAGCGGCCTTAGCTCCAAATATGAACAAGCCATATCGGGTGTGTGATGAGTGTTATGCTAAACTAAAGAAGGCCGCAGAAACTAGTTCTGCTTTGCGAAGTCCTACAATTAAAAGTGGAAATATACGTCATAAAGCCAATGATGTGGCAGATAGAGACACTCTGGTCCCTATGTTACGAGCAACACTCTCCAGACTCTCATCTTTTGGCTCAACCAACCAGAGTGAAAGCAAGTATCCAAAGCAAGACAGAAAACCAGAAGTGCATGATACTCGTGTCTTTCCCATGCTGAATGGACAGTTGCAGTTAGGGGGCTTTAATTTGACAAAAGCATCAACTTCTCTCACTGGAGATTCAGAAAAAATTATATCAGCTTCAATTCCTGCTTCCAGAAAGGCTTCTCGGTTTACGTCTCCTGTTTCAGGAAAGTCAAGCCCACGTCGGTCTTCTGATGATATTCTTGCGGATTCCAAGCTTATAAATGGAAGTTTGAGCCAAGAAATCATAAACTTAAGGACACAGGTAGAAGACCTTACTTCCAAATCCCAATATCTTGAAGCTGAACTGCAAAGAACATCAAAGAAATTGAAGGAGGTATCTGCAATAGCTGCAGATGAAGCTGAAAAATGCAAATCTGCAAAGGAAGTTATTAAGTCTCTAACTGCTCAGTTGAAGGACATGGCTGAAAGAATGCCAGAAGGACAGATCGGCAGCTGCAATTCAGGTTCTATGGCTGGCCATGCAATCAATTTTGCAGACCAGCTATCCAAAGATAGCCATCTGACAAACATAACTACTCCAGACTTGTCCAATGGCAATTCAATGGATCGAATCTTAGCTAATGGAACTAAAGGACAAACTGGAAAGGCAGAGCGGGTGCTACAAGATGAGCCTGGTGTATATATAACTTTATGCTCCTTGCCAGATGGTGGTAATGAACTCAGACGTGTTCGCTTCAGTCGGAGACATTTCACTGAAGAAGCAGCAGAGAGATGGTGGGCTGAAAATGGGGCCAAGTTATGTGAGCGGCACAATATAAAAAGTGCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1032

Amino Acids

111.06

Weight (kDa)

7.72

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2522
AarI CACCTGC 1 cut(s) 622
AasI GACNNNNNNGTC 1 cut(s) 2207
Acc36I ACCTGC 1 cut(s) 622
AccB1I GGYRCC 2 cut(s) 890, 1277
AccB7I CCANNNNNTGG 1 cut(s) 2972
AccBSI CCGCTC 2 cut(s) 2917, 3070
AccI GTMKAC 1 cut(s) 1186
AclWI GGATC 2 cut(s) 1302, 2877
AcoI YGGCCR 4 cut(s) 214, 1243, 1567, 2779
AcuI CTGAAG 5 cut(s) 351, 678, 916, 2983, 3039
AcyI GRCGYC 1 cut(s) 891
AfaI GTAC 7 cut(s) 158, 223, 439, 777, 846, 1105, 1454
AfiI CCNNNNNNNGG 2 cut(s) 2465, 2972
AflII CTTAAG 2 cut(s) 62, 2554
AflIII ACRYGT 3 cut(s) 1189, 1874, 2989
AhlI ACTAGT 3 cut(s) 1510, 2005, 2126
AjiI CACGTC 2 cut(s) 2483, 2990
AjnI CCWGG 3 cut(s) 211, 1457, 2935
AleI CACNNNNGTG 2 cut(s) 1059, 1134
Alw26I GTCTC 6 cut(s) 1415, 1800, 2193, 2460, 2703, 3001
AlwI GGATC 2 cut(s) 1302, 2877
AlwNI CAGNNNCTG 1 cut(s) 1229
ArsI GACNNNNNNTTYG 2 cut(s) 1256, 1288
AseI ATTAAT 1 cut(s) 1023
Asp700I GAANNNNTTC 3 cut(s) 663, 1780, 2440
AspLEI GCGC 2 cut(s) 96, 893
AspS9I GGNCC 7 cut(s) 23, 294, 1211, 1285, 1880, 2209, 3054
AsuHPI GGTGA 6 cut(s) 603, 767, 904, 935, 1109, 1505
AvaII GGWCC 5 cut(s) 23, 294, 1211, 1880, 2209
AxyI CCTNAGG 2 cut(s) 840, 1597
BaeGI GKGCMC 1 cut(s) 1131
BaeI ACNNNNGTAYC 2 cut(s) 2304, 2337
BalI TGGCCA 4 cut(s) 216, 1245, 1569, 2781
BanI GGYRCC 2 cut(s) 890, 1277
BauI CACGAG 1 cut(s) 2316
BbsI GAAGAC 4 cut(s) 1898, 2002, 2481, 2577
BccI CCATC 8 cut(s) 463, 1094, 1175, 1460, 1652, 2829, 2963, 3030
BcgI CGANNNNNNTGC 2 cut(s) 2297, 2331
BciT130I CCWGG 3 cut(s) 213, 1459, 2937
BciVI GTATCC 4 cut(s) 252, 1146, 1204, 2289
BclI TGATCA 2 cut(s) 1495, 1813
BcoDI GTCTC 6 cut(s) 1415, 1800, 2193, 2460, 2703, 3001
BcuI ACTAGT 3 cut(s) 1510, 2005, 2126
BfmI CTRYAG 4 cut(s) 621, 651, 1383, 2652
BfoI RGCGCY 1 cut(s) 894
BfrI CTTAAG 2 cut(s) 62, 2554
BfuAI ACCTGC 1 cut(s) 622
BfuI GTATCC 4 cut(s) 252, 1146, 1204, 2289
BglII AGATCT 1 cut(s) 1081
BmcAI AGTACT 1 cut(s) 777
Bme1390I CCNGG 3 cut(s) 213, 1459, 2937
Bme18I GGWCC 5 cut(s) 23, 294, 1211, 1880, 2209
BmgBI CACGTC 2 cut(s) 2483, 2990
BmgT120I GGNCC 7 cut(s) 23, 294, 1211, 1285, 1880, 2209, 3054
BmiI GGNNCC 4 cut(s) 892, 1279, 2211, 3055
BmrFI CCNGG 3 cut(s) 213, 1459, 2937
BmsI GCATC 5 cut(s) 626, 718, 817, 1928, 2384
BpiI GAAGAC 4 cut(s) 1898, 2002, 2481, 2577
BplI GAGNNNNNCTC 4 cut(s) 562, 594, 2214, 2246
BpmI CTGGAG 5 cut(s) 406, 1098, 2218, 2412, 2826
Bpu10I CCTNAGC 1 cut(s) 2053
BsaBI GATNNNNATC 1 cut(s) 2820
BsaHI GRCGYC 1 cut(s) 891
BsaJI CCNNGG 8 cut(s) 297, 858, 1214, 1281, 1288, 1316, 1458, 1801
BsaXI ACNNNNNCTCC 4 cut(s) 774, 804, 1297, 1327
Bsc4I CCNNNNNNNGG 2 cut(s) 2465, 2972
Bse1I ACTGG 5 cut(s) 389, 852, 1246, 2395, 2908
Bse21I CCTNAGG 2 cut(s) 840, 1597
Bse8I GATNNNNATC 1 cut(s) 2820
BseBI CCWGG 3 cut(s) 213, 1459, 2937
BseDI CCNNGG 8 cut(s) 297, 858, 1214, 1281, 1288, 1316, 1458, 1801
BseGI GGATG 3 cut(s) 328, 1186, 1471
BseJI GATNNNNATC 1 cut(s) 2820
BseLI CCNNNNNNNGG 2 cut(s) 2465, 2972
BseMII CTCAG 7 cut(s) 26, 202, 477, 1410, 1611, 2723, 2998
BseNI ACTGG 5 cut(s) 389, 852, 1246, 2395, 2908
BseRI GAGGAG 1 cut(s) 959
BseSI GKGCMC 1 cut(s) 1131
BshNI GGYRCC 2 cut(s) 890, 1277
BsiSI CCGG 1 cut(s) 124
BslFI GGGAC 3 cut(s) 411, 1277, 2195
BslI CCNNNNNNNGG 2 cut(s) 2465, 2972
BsmAI GTCTC 6 cut(s) 1415, 1800, 2193, 2460, 2703, 3001
BsmBI CGTCTC 1 cut(s) 2460
BsmFI GGGAC 3 cut(s) 411, 1277, 2195
BsmI GAATGC 2 cut(s) 1526, 2739
Bsp1286I GDGCHC 1 cut(s) 1131
Bsp1407I TGTACA 1 cut(s) 1452
Bsp143I GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
Bsp19I CCATGG 3 cut(s) 1214, 1288, 1801
BspCNI CTCAG 7 cut(s) 25, 201, 478, 1411, 1610, 2722, 2997
BspLI GGNNCC 4 cut(s) 892, 1279, 2211, 3055
BspMAI CTGCAG 3 cut(s) 655, 1387, 2656
BspMI ACCTGC 1 cut(s) 622
BspPI GGATC 2 cut(s) 1302, 2877
BspQI GCTCTTC 1 cut(s) 837
BspT107I GGYRCC 2 cut(s) 890, 1277
BspTI CTTAAG 2 cut(s) 62, 2554
BsrBI CCGCTC 2 cut(s) 2917, 3070
BsrGI TGTACA 1 cut(s) 1452
BsrI ACTGG 5 cut(s) 389, 852, 1246, 2395, 2908
BssECI CCNNGG 8 cut(s) 297, 858, 1214, 1281, 1288, 1316, 1458, 1801
BssMI GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
BssNAI GTATAC 1 cut(s) 1187
BssNI GRCGYC 1 cut(s) 891
BssSI CACGAG 1 cut(s) 2316
BssT1I CCWWGG 5 cut(s) 297, 1214, 1281, 1288, 1801
Bst1107I GTATAC 1 cut(s) 1187
Bst2BI CACGAG 1 cut(s) 2316
Bst2UI CCWGG 3 cut(s) 213, 1459, 2937
Bst4CI ACNGT 4 cut(s) 859, 1268, 1582, 2343
Bst6I CTCTTC 2 cut(s) 837, 1441
BstACI GRCGYC 1 cut(s) 891
BstAFI CTTAAG 2 cut(s) 62, 2554
BstAPI GCANNNNNTGC 3 cut(s) 1925, 2022, 2651
BstAUI TGTACA 1 cut(s) 1452
BstC8I GCNNGC 9 cut(s) 48, 218, 959, 1042, 1207, 1243, 1363, 2023, 2779
BstDSI CCRYGG 5 cut(s) 858, 1214, 1288, 1316, 1801
BstEII GGTNACC 1 cut(s) 910
BstENI CCTNNNNNAGG 1 cut(s) 2463
BstF5I GGATG 3 cut(s) 328, 1186, 1471
BstH2I RGCGCY 1 cut(s) 894
BstHHI GCGC 2 cut(s) 96, 893
BstKTI GATC 6 cut(s) 1084, 1297, 1498, 1816, 2751, 2872
BstMAI GTCTC 6 cut(s) 1415, 1800, 2193, 2460, 2703, 3001
BstMBI GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
BstMWI GCNNNNNNNGC 9 cut(s) 56, 890, 899, 1925, 2022, 2054, 2651, 2660, 2783
BstNI CCWGG 3 cut(s) 213, 1459, 2937
BstNSI RCATGY 7 cut(s) 888, 902, 1044, 1193, 1566, 1878, 2025
BstPI GGTNACC 1 cut(s) 910
BstSCI CCNGG 3 cut(s) 211, 1457, 2935
BstSFI CTRYAG 4 cut(s) 621, 651, 1383, 2652
BstSLI GKGCMC 1 cut(s) 1131
BstV2I GAAGAC 4 cut(s) 1898, 2002, 2481, 2577
BstX2I RGATCY 1 cut(s) 1081
BstXI CCANNNNNNTGG 1 cut(s) 2188
BstYI RGATCY 1 cut(s) 1081
BstZ17I GTATAC 1 cut(s) 1187
Bsu36I CCTNAGG 2 cut(s) 840, 1597
BsuI GTATCC 4 cut(s) 252, 1146, 1204, 2289
BtgI CCRYGG 5 cut(s) 858, 1214, 1288, 1316, 1801
BtrI CACGTC 2 cut(s) 2483, 2990
BtsCI GGATG 3 cut(s) 328, 1186, 1471
BtsI GCAGTG 1 cut(s) 1377
BtsIMutI CAGTG 3 cut(s) 1377, 2388, 3015
BveI ACCTGC 1 cut(s) 622
Cac8I GCNNGC 9 cut(s) 48, 218, 959, 1042, 1207, 1243, 1363, 2023, 2779
CaiI CAGNNNCTG 1 cut(s) 1229
CfoI GCGC 2 cut(s) 96, 893
Cfr13I GGNCC 7 cut(s) 23, 294, 1211, 1285, 1880, 2209, 3054
Csp6I GTAC 7 cut(s) 157, 222, 438, 776, 845, 1104, 1453
CspCI CAANNNNNGTGG 4 cut(s) 565, 600, 1660, 1695
CviQI GTAC 7 cut(s) 157, 222, 438, 776, 845, 1104, 1453
DinI GGCGCC 1 cut(s) 892
DpnI GATC 6 cut(s) 1083, 1296, 1497, 1815, 2750, 2871
DpnII GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
DrdI GACNNNNNNGTC 1 cut(s) 2207
DseDI GACNNNNNNGTC 1 cut(s) 2207
EaeI YGGCCR 4 cut(s) 214, 1243, 1567, 2779
Eam1104I CTCTTC 2 cut(s) 837, 1441
EarI CTCTTC 2 cut(s) 837, 1441
Eco130I CCWWGG 5 cut(s) 297, 1214, 1281, 1288, 1801
Eco32I GATATC 1 cut(s) 40
Eco47I GGWCC 5 cut(s) 23, 294, 1211, 1880, 2209
Eco57I CTGAAG 5 cut(s) 351, 678, 916, 2983, 3039
Eco81I CCTNAGG 2 cut(s) 840, 1597
Eco91I GGTNACC 1 cut(s) 910
EcoNI CCTNNNNNAGG 1 cut(s) 2463
EcoO109I RGGNCCY 1 cut(s) 294
EcoO65I GGTNACC 1 cut(s) 910
EcoRII CCWGG 3 cut(s) 211, 1457, 2935
EcoRV GATATC 1 cut(s) 40
EcoT14I CCWWGG 5 cut(s) 297, 1214, 1281, 1288, 1801
EcoT22I ATGCAT 1 cut(s) 733
EgeI GGCGCC 1 cut(s) 892
EheI GGCGCC 1 cut(s) 892
ErhI CCWWGG 5 cut(s) 297, 1214, 1281, 1288, 1801
Esp3I CGTCTC 1 cut(s) 2460
FalI AAGNNNNNCTT 4 cut(s) 1345, 1377, 1612, 1644
FaqI GGGAC 3 cut(s) 411, 1277, 2195
FauI CCCGC 2 cut(s) 1037, 2910
FauNDI CATATG 1 cut(s) 811
FbaI TGATCA 2 cut(s) 1495, 1813
FblI GTMKAC 1 cut(s) 1186
FokI GGATG 3 cut(s) 335, 1193, 1478
GlaI GCGC 2 cut(s) 95, 892
GsuI CTGGAG 5 cut(s) 406, 1098, 2218, 2412, 2826
HaeII RGCGCY 1 cut(s) 894
HapII CCGG 1 cut(s) 124
HhaI GCGC 2 cut(s) 96, 893
Hin1I GRCGYC 1 cut(s) 891
Hin6I GCGC 2 cut(s) 94, 891
HinP1I GCGC 2 cut(s) 94, 891
HincII GTYRAC 1 cut(s) 1006
HindII GTYRAC 1 cut(s) 1006
HindIII AAGCTT 1 cut(s) 2516
HpaII CCGG 1 cut(s) 124
HphI GGTGA 6 cut(s) 603, 767, 904, 935, 1109, 1505
Hpy166II GTNNAC 5 cut(s) 1006, 1187, 1455, 2003, 2451
Hpy188I TCNGA 8 cut(s) 15, 1973, 2043, 2401, 2494, 2826, 2987, 3006
Hpy8I GTNNAC 5 cut(s) 1006, 1187, 1455, 2003, 2451
Hpy99I CGWCG 2 cut(s) 447, 2487
HpyAV CCTTC 7 cut(s) 653, 752, 1770, 2107, 2626, 2710, 2735
HpyCH4III ACNGT 4 cut(s) 859, 1268, 1582, 2343
HpyCH4IV ACGT 5 cut(s) 1981, 2170, 2453, 2482, 2989
HpyF10VI GCNNNNNNNGC 9 cut(s) 56, 890, 899, 1925, 2022, 2054, 2651, 2660, 2783
HpySE526I ACGT 5 cut(s) 1981, 2170, 2453, 2482, 2989
Hsp92I GRCGYC 1 cut(s) 891
HspAI GCGC 2 cut(s) 94, 891
KasI GGCGCC 1 cut(s) 890
Ksp22I TGATCA 2 cut(s) 1495, 1813
Kzo9I GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
LguI GCTCTTC 1 cut(s) 837
LmnI GCTCC 2 cut(s) 2062, 2963
LweI GCATC 5 cut(s) 626, 718, 817, 1928, 2384
MaeII ACGT 5 cut(s) 1981, 2170, 2453, 2482, 2989
MalI GATC 6 cut(s) 1083, 1296, 1497, 1815, 2750, 2871
MbiI CCGCTC 2 cut(s) 2917, 3070
MboI GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
MfeI CAATTG 1 cut(s) 1996
MflI RGATCY 1 cut(s) 1081
MhlI GDGCHC 1 cut(s) 1131
MlsI TGGCCA 4 cut(s) 216, 1245, 1569, 2781
MluNI TGGCCA 4 cut(s) 216, 1245, 1569, 2781
Mly113I GGCGCC 1 cut(s) 891
MlyI GAGTC 4 cut(s) 149, 373, 956, 2232
MmeI TCCRAC 1 cut(s) 2984
Mox20I TGGCCA 4 cut(s) 216, 1245, 1569, 2781
Mph1103I ATGCAT 1 cut(s) 733
MroXI GAANNNNTTC 3 cut(s) 663, 1780, 2440
MscI TGGCCA 4 cut(s) 216, 1245, 1569, 2781
MseI TTAA 9 cut(s) 63, 83, 183, 351, 1023, 2154, 2361, 2555, 2694
MslI CAYNNNNRTG 3 cut(s) 1059, 1134, 1179
Msp20I TGGCCA 4 cut(s) 216, 1245, 1569, 2781
MspA1I CMGCKG 6 cut(s) 238, 656, 1226, 1241, 1895, 2757
MspCI CTTAAG 2 cut(s) 62, 2554
MspI CCGG 1 cut(s) 124
MspR9I CCNGG 3 cut(s) 213, 1459, 2937
MunI CAATTG 1 cut(s) 1996
Mva1269I GAATGC 2 cut(s) 1526, 2739
MvaI CCWGG 3 cut(s) 213, 1459, 2937
MwoI GCNNNNNNNGC 9 cut(s) 56, 890, 899, 1925, 2022, 2054, 2651, 2660, 2783
NarI GGCGCC 1 cut(s) 891
NcoI CCATGG 3 cut(s) 1214, 1288, 1801
NdeI CATATG 1 cut(s) 811
NdeII GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
NlaIV GGNNCC 4 cut(s) 892, 1279, 2211, 3055
NmuCI GTSAC 4 cut(s) 460, 910, 1172, 1231
NsiI ATGCAT 1 cut(s) 733
NspI RCATGY 7 cut(s) 888, 902, 1044, 1193, 1566, 1878, 2025
OliI CACNNNNGTG 2 cut(s) 1059, 1134
PaeI GCATGC 2 cut(s) 1044, 2025
PaqCI CACCTGC 1 cut(s) 622
PciI ACATGT 2 cut(s) 1189, 1874
PciSI GCTCTTC 1 cut(s) 837
PcsI WCGNNNNNNNCGW 1 cut(s) 442
PctI GAATGC 2 cut(s) 1526, 2739
PdmI GAANNNNTTC 3 cut(s) 663, 1780, 2440
PfeI GAWTC 7 cut(s) 395, 587, 851, 1502, 2396, 2510, 2874
PflMI CCANNNNNTGG 1 cut(s) 2972
PleI GAGTC 4 cut(s) 148, 372, 955, 2232
PluTI GGCGCC 1 cut(s) 894
PpsI GAGTC 4 cut(s) 148, 372, 955, 2232
PpuMI RGGWCCY 1 cut(s) 294
PscI ACATGT 2 cut(s) 1189, 1874
PshBI ATTAAT 1 cut(s) 1023
PsiI TTATAA 1 cut(s) 2522
Psp5II RGGWCCY 1 cut(s) 294
Psp6I CCWGG 3 cut(s) 211, 1457, 2935
PspEI GGTNACC 1 cut(s) 910
PspGI CCWGG 3 cut(s) 211, 1457, 2935
PspN4I GGNNCC 4 cut(s) 892, 1279, 2211, 3055
PspPI GGNCC 7 cut(s) 23, 294, 1211, 1285, 1880, 2209, 3054
PspPPI RGGWCCY 1 cut(s) 294
PstI CTGCAG 3 cut(s) 655, 1387, 2656
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 1 cut(s) 1081
PvuII CAGCTG 4 cut(s) 656, 1226, 1241, 2757
RsaI GTAC 7 cut(s) 158, 223, 439, 777, 846, 1105, 1454
RsaNI GTAC 7 cut(s) 157, 222, 438, 776, 845, 1104, 1453
RseI CAYNNNNRTG 3 cut(s) 1059, 1134, 1179
SapI GCTCTTC 1 cut(s) 837
SaqAI TTAA 9 cut(s) 63, 83, 183, 351, 1023, 2154, 2361, 2555, 2694
Sau3AI GATC 6 cut(s) 1081, 1294, 1495, 1813, 2748, 2869
Sau96I GGNCC 7 cut(s) 23, 294, 1211, 1285, 1880, 2209, 3054
ScaI AGTACT 1 cut(s) 777
SchI GAGTC 4 cut(s) 149, 373, 956, 2232
ScrFI CCNGG 3 cut(s) 213, 1459, 2937
SduI GDGCHC 1 cut(s) 1131
SfaNI GCATC 5 cut(s) 626, 718, 817, 1928, 2384
SfcI CTRYAG 4 cut(s) 621, 651, 1383, 2652
SfoI GGCGCC 1 cut(s) 892
SinI GGWCC 5 cut(s) 23, 294, 1211, 1880, 2209
SmiMI CAYNNNNRTG 3 cut(s) 1059, 1134, 1179
SmlI CTYRAG 2 cut(s) 62, 2554
SmoI CTYRAG 2 cut(s) 62, 2554
SpeI ACTAGT 3 cut(s) 1510, 2005, 2126
SphI GCATGC 2 cut(s) 1044, 2025
SspDI GGCGCC 1 cut(s) 890
SspI AATATT 2 cut(s) 231, 1888
StyD4I CCNGG 3 cut(s) 211, 1457, 2935
StyI CCWWGG 5 cut(s) 297, 1214, 1281, 1288, 1801
TaaI ACNGT 4 cut(s) 859, 1268, 1582, 2343
TaiI ACGT 5 cut(s) 1984, 2173, 2456, 2485, 2992
TaqI TCGA 7 cut(s) 30, 42, 367, 442, 640, 667, 2872
TaqII GACCGA 1 cut(s) 2475
TatI WGTACW 2 cut(s) 775, 1452
TauI GCSGC 3 cut(s) 2051, 2120, 3073
TfiI GAWTC 7 cut(s) 395, 587, 851, 1502, 2396, 2510, 2874
Tru1I TTAA 9 cut(s) 63, 83, 183, 351, 1023, 2154, 2361, 2555, 2694
Tru9I TTAA 9 cut(s) 63, 83, 183, 351, 1023, 2154, 2361, 2555, 2694
TscAI CASTG 3 cut(s) 1384, 2395, 3022
TseFI GTSAC 4 cut(s) 460, 910, 1172, 1231
Tsp45I GTSAC 4 cut(s) 460, 910, 1172, 1231
TspGWI ACGGA 1 cut(s) 1146
TspRI CASTG 3 cut(s) 1384, 2395, 3022
Van91I CCANNNNNTGG 1 cut(s) 2972
Vha464I CTTAAG 2 cut(s) 62, 2554
VpaK11BI GGWCC 5 cut(s) 23, 294, 1211, 1880, 2209
VspI ATTAAT 1 cut(s) 1023
XagI CCTNNNNNAGG 1 cut(s) 2463
XbaI TCTAGA 1 cut(s) 1505
XceI RCATGY 7 cut(s) 888, 902, 1044, 1193, 1566, 1878, 2025
XcmI CCANNNNNNNNNTGG 1 cut(s) 1487
XmiI GTMKAC 1 cut(s) 1186
XmnI GAANNNNTTC 3 cut(s) 663, 1780, 2440
ZrmI AGTACT 1 cut(s) 777
Zsp2I ATGCAT 1 cut(s) 733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.