Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0007387

Physical Location & Seq

Genomic Coordinates Forward (+)

4285998 .. 4289966

Gene Structure 3969 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g06590.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3087 bp

ATGTTTCGACAATTATTCCTGGCCAGCGTACTGGCTGCTCTCGAAAGAAGCTTACATGGAAGATTTGTTCTTTGGTGGCTTCACCAATTACCTTCCAAAGATATTTATAAACATCACTGCGGCTTTTCTTTGCAGGCAATATTTCAGCGGTATCCACGGCCTGAAAAGGAGTATCAGTCATTTTCGCTTCTATACAACGACAGGTCCTTGGACTTGGTGAGTAAATTTGCTACATATATTCAAGGATCATTGATGCAACTGCAATTACCACCCCCTGCTGGACAGATATGTAAAGACAAAGATGAAGCTGAAGTTTGGTTTGTTGGTCTTAAGGCAATAATCACTCGAGGTAATTACCGGAACTGGAGAAGCGAACCAAGATCGGAGGGCACATCAATAGATAGCCCCCATGCTCGGACTCGACGACGTTCTCCAACAGTGACACCATTCAGCATTGGGGATCCAAGAGATACTGAGGGAGTTTCTTTGGAGAATATCCCACAGAGTAGATTAGGACGAGCATTCGCTGACATAATATCTTATACTGCCACTGCCACCCCCAAGAATGCCATACAAGCCGAATCAGTCTCAAATGCATCGTTATCACCTGTATCTGTGGATAACTCCAATGGTCGAAATTCTGCATCTGAAGCATTTCGGGTTAGTTTATCTAGTGCTGTAAGCTCATCTAGTCAAGGTTCTTGTCAAGATGATTTTGATGCTTTAGGAGATGTTTTTATTTGGGGCGAAGGTATTGGTGGTGGAGTACTGGGAGGCGGTGTGGATAGAGTAGGGAGCTCATATGGTTCCAGGACGGATGCTTTTCTGCCTAAGGTATTGGAATCAACAGTGGTCGTAGATGTTCACGGAATTGCTTGTGGTGCCAGACATGCTGTTCTGGTCACCAAGCAAGGGGAAATCTTCAGCTGGGGAGAGGAGTCAGGAGGCAGGCTTGGTCACGGTGTCGATACAGATGTTTCCCACCCAAAGCTCATTGAGACTCTTAGTGGGATGAATGTTGAATTAGTGGCATGTGGGGAATATCACACTTGTGCTGTTACACTTTCTGGAGATCTCTATACATGGGGTGATGGTACTCATCATTTTGGCCTGCTTGGGCATGGAAGTGAAGTTAGTCACTGGATTCCCAAAAAGGTATGTGGTCACTTGGAAGGTATCCACATATCCTATATCGCTTGTGGACCGTGGCATACAGCTGCTGTGACATCAGGTGGCCAGTTATTTACCTTTGGGGATGGAACTTTTGGTGCCTTAGGGCATGGGGATCATAGTAGCACAAGTACGCCACGGGAGGTGGAAACTTTGAGAGGGCTAAGAACAACAAGGATTGCTTGTGGTATTTGGCACACTGCTGCAGTTGTTGAAGTAGTGAATGAATCGTCTAGCCCCGAGACTACTAGTAACTCTTCATATGGGAAGCTTTACACTTGGGGTGATGGTGATAAAGGCCGACTTGGACATGGTGATGAACAATCTAAGCTAGTTCCTGAACGCGTAGCTGCATTGGTTGATAAAAATATGTGTCAAGTAGCCTGTGGCCATAATCTCACAGTTGGCCTTACAACCTTAGGACAGGTATATACAATGGGAAGTGCTGCTTATGGACAGCTTGGCAATCCTTCAGCTGACGGGAAAGTTCCCACTCTGGTCGAGGGTGAAATTGCAGATAGTTTTGTAGAAGAAATTGCATGCGGTTCTTATCATGTTGCAGTTTTGACTTCCAAGACTGAGGTTTATACTTGGGGAAGGGGTTCGAATGGGCAACTAGGCCACGGAGACAATGATCATAGATATACGCCTACCCCTGTTGATTGTATGAAGGATAAGCAAGTAAAGAGTGTAGCATGTGGTCCAAACCTAACGGCGGTCATTTGTCTTCATAAATGGGTATCAAGTGCTGACCATTCTGTTTGCTCTGATTGTCACAATCCCTTTGGTTTCAGAAGAAAACGTCACAATTGTTACAACTGTGGGCTAGTCTTCTGCAAAGCATGCAGCAGTAAGAAATCTCTGAAAGCTGCCTTGGCTCCAAATACAAACAAGCCATATCGGGTGTGCGACGAGTGTTATAGTAAACTGAAGAAGGCTGCAGAAGCCAGTTCTGCTTTGCGAAGTCCAATAAGAAGTGGAAATATGCGTCCTAAATCCAATGAGGTGACAGATAAAGAAAATCTGATCCCTATGTTACGGGCAACACTCTCCAGACTCTCTTCTTTCGGCACAAACAACCATGGCGAAAGCAAGCAGCTTAAGCAAGAAAGAAAACCAGAAGTGCGTGATAATCGTGTCTTCCCAGTGTTGAATGGACAGTTGCAGTTAGGGGGTTTTAATTTGACAAGAGCATCAACTCCTCCCACTGCAGATTCGGAAAAAGTTGTTTCGCCTTCTATTCCTGCCTCTAAAAAGGCTTCTCGGTATACATCTCCTGTTTCAGGAAAGTCAAGTCCACGCCGGTCTTCTGAAGAAATCATTCTTGAGGATTCAAAGCTTATAAATGGAAGTTTAAGCCAAGAAATCGTACAATTAAGGACACAGGTAGAAGGCCTTACTCTCAAATCCCAGCATCTTGAAGCTGAACTTCAACGCACATCAAAGAAATTGAAGGAGGTCTCTGCAATAGCCACAGATGAAACTGAAAAACGCAAATCTGCAAAAGAAGTTATTAAGTCTCTAACTGCTCAGTTGAAGGAGATGTCCGAAAGAATGCCTGAAGGGCAGATGAGTCATTGCAATACAGGTTCTATTTCGCATGCAATCAGCTTTGGGAACCAGTTATCCAAAGAGCCCTCTCTGTCAAACATAAATACTTCGCAAACTTTGTCCAATGGCAATTCAATGGATCGAATCCTAACTAATGGGACTAAATCACCAACTGGAAAGTCCGAGCGGGTGCTACAAGACGAACCTGGTGTATATATAACTCTAAGCTCCTTGCCAGACGGCAGTAATGAACTCAGGCGTGTTCGCTTCAGTCGGAGACATTTCACTGAAGAAGCAGCAGAGAGATGGTGGGCTGAAAATGGGGCAAAGTTATGTGAGCGGCACAATATAAAAGGTGCAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRX BRX_N FYVE PH_12 RCC1

Protein Analysis

1029

Amino Acids

111.8

Weight (kDa)

8.34

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69710 AT1G69710
fragaria_vesca	FvH4_4g31540 FvH4_4g31540
malus_domestica	MD13G1073700.v1.1 MD16G1075000.v1.1
prunus_persica	Prupe.1G272300_v2.0.a1 Prupe.1G272300_v2.0.a1 Prupe.1G272300_v2.0.a1 Prupe.1G272300_v2.0.a1 Prupe.1G272300_v2.0.a1
pyrus_communis	pycom13g06590
rosa_chinensis	RchiOBHm_Chr4g0440051
rosa_laevigata	RLG00000006210
rosa_roxburghii	Rroxscaffold_5G00380990
rosa_rugosa	Rorug04G0323700 Rorug04G0323800 Rorug04G0323900 Rorug04G0324000 Rorug04G0324000
rosa_samantha	Rh4AG374500 Rh4BG386900 Rh4CG401400 Rh4DG381100
rosa_wichuraiana	Rw4G032040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	108, 2513
AccB1I	GGYRCC	2 cut(s)	881, 1268
AccBSI	CCGCTC	2 cut(s)	2908, 3061
AccI	GTMKAC	1 cut(s)	2438
AccII	CGCG	1 cut(s)	1515
AciI	CCGC	7 cut(s)	120, 148, 777, 1713, 1886, 2908, 3061
AclWI	GGATC	6 cut(s)	253, 455, 468, 1293, 2191, 2868
AcoI	YGGCCR	3 cut(s)	21, 1234, 1558
AcsI	RAATTY	2 cut(s)	224, 637
AcuI	CTGAAG	9 cut(s)	330, 669, 907, 1626, 2120, 2502, 2751, 2974, 3030
AfaI	GTAC	5 cut(s)	30, 768, 1096, 1303, 2541
AfiI	CCNNNNNNNGG	5 cut(s)	278, 414, 912, 1885, 2453
AflII	CTTAAG	2 cut(s)	329, 2270
AflIII	ACRYGT	1 cut(s)	1513
AhlI	ACTAGT	1 cut(s)	1418
AjnI	CCWGG	3 cut(s)	18, 809, 2926
AjuI	GAANNNNNNNTTGG	2 cut(s)	2027, 2059
AleI	CACNNNNGTG	1 cut(s)	1050
AloI	GAACNNNNNNTCC	4 cut(s)	51, 83, 2780, 2812
Alw21I	GWGCWC	1 cut(s)	800
Alw26I	GTCTC	7 cut(s)	592, 992, 1406, 1791, 2635, 2694, 2992
AlwI	GGATC	6 cut(s)	253, 455, 468, 1293, 2191, 2868
AlwNI	CAGNNNCTG	1 cut(s)	1220
Ama87I	CYCGRG	2 cut(s)	345, 1409
AoxI	GGCC	9 cut(s)	21, 158, 1108, 1234, 1468, 1558, 1576, 1789, 2563
ApoI	RAATTY	2 cut(s)	224, 637
Asp700I	GAANNNNTTC	3 cut(s)	654, 1771, 2490
AspS9I	GGNCC	3 cut(s)	204, 1202, 1871
AsuII	TTCGAA	1 cut(s)	1775
AvaI	CYCGRG	2 cut(s)	345, 1409
AvaII	GGWCC	3 cut(s)	204, 1202, 1871
AxyI	CCTNAGG	3 cut(s)	831, 1273, 1588
BaeGI	GKGCMC	1 cut(s)	392
BaeI	ACNNNNGTAYC	2 cut(s)	960, 993
BalI	TGGCCA	3 cut(s)	23, 1236, 1560
BamHI	GGATCC	1 cut(s)	460
BanI	GGYRCC	2 cut(s)	881, 1268
BanII	GRGCYC	2 cut(s)	800, 2808
BbsI	GAAGAC	4 cut(s)	1889, 1993, 2302, 2469
Bbv12I	GWGCWC	1 cut(s)	800
BccI	CCATC	4 cut(s)	1085, 1250, 1451, 3021
BceAI	ACGGC	3 cut(s)	173, 1899, 2977
BciT130I	CCWGG	3 cut(s)	20, 811, 2928
BciVI	GTATCC	2 cut(s)	162, 1187
BclI	TGATCA	1 cut(s)	1804
BcoDI	GTCTC	7 cut(s)	592, 992, 1406, 1791, 2635, 2694, 2992
BcuI	ACTAGT	1 cut(s)	1418
BfaI	CTAG	7 cut(s)	672, 690, 1404, 1419, 1502, 1787, 1997
BfmI	CTRYAG	3 cut(s)	1374, 2109, 2379
BfrI	CTTAAG	2 cut(s)	329, 2270
BfuI	GTATCC	2 cut(s)	162, 1187
BglI	GCCNNNNNGGC	1 cut(s)	2734
BglII	AGATCT	1 cut(s)	1072
BmcAI	AGTACT	1 cut(s)	768
Bme1390I	CCNGG	3 cut(s)	20, 811, 2928
Bme18I	GGWCC	3 cut(s)	204, 1202, 1871
BmeT110I	CYCGRG	2 cut(s)	345, 1409
BmgT120I	GGNCC	3 cut(s)	204, 1202, 1871
BmiI	GGNNCC	6 cut(s)	462, 808, 883, 1270, 2049, 2789
BmrFI	CCNGG	3 cut(s)	20, 811, 2928
BmrI	ACTGGG	2 cut(s)	779, 2309
BmsI	GCATC	7 cut(s)	243, 605, 653, 709, 808, 2372, 2593
BmuI	ACTGGG	2 cut(s)	779, 2309
BpiI	GAAGAC	4 cut(s)	1889, 1993, 2302, 2469
BpmI	CTGGAG	3 cut(s)	385, 1089, 2206
Bpu14I	TTCGAA	1 cut(s)	1775
BpuEI	CTTGAG	1 cut(s)	2516
BsaI	GGTCTC	1 cut(s)	2635
BsaJI	CCNNGG	7 cut(s)	155, 207, 1205, 1307, 1792, 2043, 2251
BsaWI	WCCGGW	1 cut(s)	357
BsaXI	ACNNNNNCTCC	4 cut(s)	161, 191, 765, 795
Bsc4I	CCNNNNNNNGG	5 cut(s)	278, 414, 912, 1885, 2453
Bse118I	RCCGGY	1 cut(s)	2472
Bse1I	ACTGG	9 cut(s)	36, 368, 774, 1145, 1237, 2118, 2315, 2791, 2899
Bse21I	CCTNAGG	3 cut(s)	831, 1273, 1588
Bse3DI	GCAATG	1 cut(s)	2746
BseBI	CCWGG	3 cut(s)	20, 811, 2928
BseDI	CCNNGG	7 cut(s)	155, 207, 1205, 1307, 1792, 2043, 2251
BseGI	GGATG	3 cut(s)	823, 1017, 1261
BseLI	CCNNNNNNNGG	5 cut(s)	278, 414, 912, 1885, 2453
BseMI	GCAATG	1 cut(s)	2746
BseMII	CTCAG	4 cut(s)	465, 1740, 2714, 2989
BseNI	ACTGG	9 cut(s)	36, 368, 774, 1145, 1237, 2118, 2315, 2791, 2899
BseRI	GAGGAG	2 cut(s)	950, 2361
BseSI	GKGCMC	1 cut(s)	392
BseYI	CCCAGC	2 cut(s)	927, 2580
Bsh1236I	CGCG	1 cut(s)	1515
BshFI	GGCC	9 cut(s)	23, 160, 1110, 1236, 1470, 1560, 1578, 1791, 2565
BshNI	GGYRCC	2 cut(s)	881, 1268
BsiHKAI	GWGCWC	1 cut(s)	800
BsiHKCI	CYCGRG	2 cut(s)	345, 1409
BsiSI	CCGG	2 cut(s)	358, 2473
BslFI	GGGAC	1 cut(s)	2893
BslI	CCNNNNNNNGG	5 cut(s)	278, 414, 912, 1885, 2453
BsmAI	GTCTC	7 cut(s)	592, 992, 1406, 1791, 2635, 2694, 2992
BsmFI	GGGAC	1 cut(s)	2893
BsmI	GAATGC	3 cut(s)	521, 571, 2730
BsnI	GGCC	9 cut(s)	23, 160, 1110, 1236, 1470, 1560, 1578, 1791, 2565
Bso31I	GGTCTC	1 cut(s)	2635
BsoBI	CYCGRG	2 cut(s)	345, 1409
Bsp119I	TTCGAA	1 cut(s)	1775
Bsp1286I	GDGCHC	3 cut(s)	392, 800, 2808
Bsp143I	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
Bsp19I	CCATGG	1 cut(s)	2251
BspACI	CCGC	7 cut(s)	120, 148, 777, 1713, 1886, 2908, 3061
BspANI	GGCC	9 cut(s)	23, 160, 1110, 1236, 1470, 1560, 1578, 1791, 2565
BspCNI	CTCAG	4 cut(s)	466, 1741, 2713, 2988
BspFNI	CGCG	1 cut(s)	1515
BspLI	GGNNCC	6 cut(s)	462, 808, 883, 1270, 2049, 2789
BspMAI	CTGCAG	3 cut(s)	1378, 2113, 2383
BspPI	GGATC	6 cut(s)	253, 455, 468, 1293, 2191, 2868
BspT104I	TTCGAA	1 cut(s)	1775
BspT107I	GGYRCC	2 cut(s)	881, 1268
BspTI	CTTAAG	2 cut(s)	329, 2270
BspTNI	GGTCTC	1 cut(s)	2635
BsrBI	CCGCTC	2 cut(s)	2908, 3061
BsrDI	GCAATG	1 cut(s)	2746
BsrFI	RCCGGY	1 cut(s)	2472
BsrI	ACTGG	9 cut(s)	36, 368, 774, 1145, 1237, 2118, 2315, 2791, 2899
BssAI	RCCGGY	1 cut(s)	2472
BssECI	CCNNGG	7 cut(s)	155, 207, 1205, 1307, 1792, 2043, 2251
BssMI	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
BssNAI	GTATAC	1 cut(s)	2439
BssT1I	CCWWGG	3 cut(s)	207, 2043, 2251
Bst1107I	GTATAC	1 cut(s)	2439
Bst2UI	CCWGG	3 cut(s)	20, 811, 2928
Bst4CI	ACNGT	7 cut(s)	439, 850, 962, 1206, 1573, 1991, 2331
Bst6I	CTCTTC	2 cut(s)	1432, 2236
BstAFI	CTTAAG	2 cut(s)	329, 2270
BstAPI	GCANNNNNTGC	1 cut(s)	2013
BstBI	TTCGAA	1 cut(s)	1775
BstC8I	GCNNGC	8 cut(s)	25, 135, 950, 1112, 1711, 2014, 2264, 2772
BstDSI	CCRYGG	5 cut(s)	155, 1205, 1307, 1792, 2251
BstEII	GGTNACC	1 cut(s)	901
BstENI	CCTNNNNNAGG	1 cut(s)	2451
BstF5I	GGATG	3 cut(s)	823, 1017, 1261
BstFNI	CGCG	1 cut(s)	1515
BstKTI	GATC	8 cut(s)	248, 383, 463, 1075, 1288, 1807, 2199, 2863
BstMAI	GTCTC	7 cut(s)	592, 992, 1406, 1791, 2635, 2694, 2992
BstMBI	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
BstNI	CCWGG	3 cut(s)	20, 811, 2928
BstNSI	RCATGY	6 cut(s)	893, 1035, 1713, 1869, 2016, 2774
BstPI	GGTNACC	1 cut(s)	901
BstSCI	CCNGG	3 cut(s)	18, 809, 2926
BstSFI	CTRYAG	3 cut(s)	1374, 2109, 2379
BstSLI	GKGCMC	1 cut(s)	392
BstUI	CGCG	1 cut(s)	1515
BstV2I	GAAGAC	4 cut(s)	1889, 1993, 2302, 2469
BstX2I	RGATCY	2 cut(s)	460, 1072
BstXI	CCANNNNNNTGG	1 cut(s)	31
BstYI	RGATCY	2 cut(s)	460, 1072
BstZ17I	GTATAC	1 cut(s)	2439
Bsu36I	CCTNAGG	3 cut(s)	831, 1273, 1588
BsuI	GTATCC	2 cut(s)	162, 1187
BsuRI	GGCC	9 cut(s)	23, 160, 1110, 1236, 1470, 1560, 1578, 1791, 2565
BtgI	CCRYGG	5 cut(s)	155, 1205, 1307, 1792, 2251
BtsCI	GGATG	3 cut(s)	823, 1017, 1261
BtsI	GCAGTG	4 cut(s)	115, 549, 1368, 2376
BtsIMutI	CAGTG	9 cut(s)	115, 444, 549, 855, 1138, 1368, 2322, 2376, 3006
Cac8I	GCNNGC	8 cut(s)	25, 135, 950, 1112, 1711, 2014, 2264, 2772
CaiI	CAGNNNCTG	1 cut(s)	1220
Cfr10I	RCCGGY	1 cut(s)	2472
Cfr13I	GGNCC	3 cut(s)	204, 1202, 1871
CseI	GACGC	1 cut(s)	2147
CsiI	ACCWGGT	1 cut(s)	2926
Csp6I	GTAC	5 cut(s)	29, 767, 1095, 1302, 2540
CviQI	GTAC	5 cut(s)	29, 767, 1095, 1302, 2540
DpnI	GATC	8 cut(s)	247, 382, 462, 1074, 1287, 1806, 2198, 2862
DpnII	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
EaeI	YGGCCR	3 cut(s)	21, 1234, 1558
Eam1104I	CTCTTC	2 cut(s)	1432, 2236
EarI	CTCTTC	2 cut(s)	1432, 2236
Ecl136II	GAGCTC	1 cut(s)	798
Eco130I	CCWWGG	3 cut(s)	207, 2043, 2251
Eco147I	AGGCCT	1 cut(s)	2565
Eco24I	GRGCYC	2 cut(s)	800, 2808
Eco31I	GGTCTC	1 cut(s)	2635
Eco47I	GGWCC	3 cut(s)	204, 1202, 1871
Eco53kI	GAGCTC	1 cut(s)	798
Eco57I	CTGAAG	9 cut(s)	330, 669, 907, 1626, 2120, 2502, 2751, 2974, 3030
Eco81I	CCTNAGG	3 cut(s)	831, 1273, 1588
Eco88I	CYCGRG	2 cut(s)	345, 1409
Eco91I	GGTNACC	1 cut(s)	901
EcoICRI	GAGCTC	1 cut(s)	798
EcoNI	CCTNNNNNAGG	1 cut(s)	2451
EcoO109I	RGGNCCY	1 cut(s)	204
EcoO65I	GGTNACC	1 cut(s)	901
EcoRII	CCWGG	3 cut(s)	18, 809, 2926
EcoT14I	CCWWGG	3 cut(s)	207, 2043, 2251
EcoT22I	ATGCAT	1 cut(s)	598
EcoT38I	GRGCYC	2 cut(s)	800, 2808
ErhI	CCWWGG	3 cut(s)	207, 2043, 2251
FalI	AAGNNNNNCTT	8 cut(s)	1336, 1368, 1458, 1490, 1603, 1635, 2583, 2615
FaqI	GGGAC	1 cut(s)	2893
FauI	CCCGC	1 cut(s)	2901
FauNDI	CATATG	2 cut(s)	802, 1432
FbaI	TGATCA	1 cut(s)	1804
FblI	GTMKAC	1 cut(s)	2438
FokI	GGATG	3 cut(s)	830, 1024, 1268
FriOI	GRGCYC	2 cut(s)	800, 2808
FspBI	CTAG	7 cut(s)	672, 690, 1404, 1419, 1502, 1787, 1997
GsaI	CCCAGC	2 cut(s)	931, 2584
GsuI	CTGGAG	3 cut(s)	385, 1089, 2206
HaeIII	GGCC	9 cut(s)	23, 160, 1110, 1236, 1470, 1560, 1578, 1791, 2565
HapII	CCGG	2 cut(s)	358, 2473
HgaI	GACGC	1 cut(s)	2147
HindIII	AAGCTT	3 cut(s)	49, 1439, 2507
HpaII	CCGG	2 cut(s)	358, 2473
Hpy166II	GTNNAC	5 cut(s)	865, 1202, 2096, 2439, 2468
Hpy188III	TCNNGA	9 cut(s)	41, 707, 942, 1068, 1508, 2223, 2454, 2495, 2588
Hpy8I	GTNNAC	5 cut(s)	865, 1202, 2096, 2439, 2468
Hpy99I	CGWCG	3 cut(s)	426, 429, 2084
HpyCH4III	ACNGT	7 cut(s)	439, 850, 962, 1206, 1573, 1991, 2331
HpyCH4IV	ACGT	2 cut(s)	427, 1972
HpySE526I	ACGT	2 cut(s)	427, 1972
Ksp22I	TGATCA	1 cut(s)	1804
Kzo9I	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
LmnI	GCTCC	3 cut(s)	795, 2053, 2954
LweI	GCATC	7 cut(s)	243, 605, 653, 709, 808, 2372, 2593
MabI	ACCWGGT	1 cut(s)	2926
MaeI	CTAG	7 cut(s)	672, 690, 1404, 1419, 1502, 1787, 1997
MaeII	ACGT	2 cut(s)	427, 1972
MalI	GATC	8 cut(s)	247, 382, 462, 1074, 1287, 1806, 2198, 2862
MbiI	CCGCTC	2 cut(s)	2908, 3061
MboI	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
MfeI	CAATTG	1 cut(s)	1978
MflI	RGATCY	2 cut(s)	460, 1072
MhlI	GDGCHC	3 cut(s)	392, 800, 2808
MlsI	TGGCCA	3 cut(s)	23, 1236, 1560
MluI	ACGCGT	1 cut(s)	1513
MluNI	TGGCCA	3 cut(s)	23, 1236, 1560
MlyI	GAGTC	5 cut(s)	412, 947, 994, 2220, 2752
MmeI	TCCRAC	2 cut(s)	458, 2975
Mox20I	TGGCCA	3 cut(s)	23, 1236, 1560
Mph1103I	ATGCAT	1 cut(s)	598
MroXI	GAANNNNTTC	3 cut(s)	654, 1771, 2490
MscI	TGGCCA	3 cut(s)	23, 1236, 1560
MseI	TTAA	6 cut(s)	330, 2271, 2349, 2525, 2546, 2685
MslI	CAYNNNNRTG	3 cut(s)	1050, 1125, 1485
Msp20I	TGGCCA	3 cut(s)	23, 1236, 1560
MspA1I	CMGCKG	4 cut(s)	148, 927, 1217, 1646
MspCI	CTTAAG	2 cut(s)	329, 2270
MspI	CCGG	2 cut(s)	358, 2473
MspR9I	CCNGG	3 cut(s)	20, 811, 2928
MunI	CAATTG	1 cut(s)	1978
Mva1269I	GAATGC	3 cut(s)	521, 571, 2730
MvaI	CCWGG	3 cut(s)	20, 811, 2928
MvnI	CGCG	1 cut(s)	1515
NcoI	CCATGG	1 cut(s)	2251
NdeI	CATATG	2 cut(s)	802, 1432
NdeII	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
NlaIV	GGNNCC	6 cut(s)	462, 808, 883, 1270, 2049, 2789
NmuCI	GTSAC	9 cut(s)	439, 901, 956, 1136, 1163, 1222, 1943, 1973, 2176
NsiI	ATGCAT	1 cut(s)	598
NspI	RCATGY	6 cut(s)	893, 1035, 1713, 1869, 2016, 2774
NspV	TTCGAA	1 cut(s)	1775
OliI	CACNNNNGTG	1 cut(s)	1050
PaeI	GCATGC	3 cut(s)	1713, 2016, 2774
PaeR7I	CTCGAG	1 cut(s)	345
PceI	AGGCCT	1 cut(s)	2565
PcsI	WCGNNNNNNNCGW	1 cut(s)	421
PctI	GAATGC	3 cut(s)	521, 571, 2730
PdmI	GAANNNNTTC	3 cut(s)	654, 1771, 2490
PfeI	GAWTC	7 cut(s)	581, 842, 1144, 1397, 2384, 2501, 2865
PfoI	TCCNGGA	1 cut(s)	809
PleI	GAGTC	5 cut(s)	412, 946, 994, 2220, 2751
PpsI	GAGTC	5 cut(s)	412, 946, 994, 2220, 2751
PpuMI	RGGWCCY	1 cut(s)	204
PsiI	TTATAA	2 cut(s)	108, 2513
Psp124BI	GAGCTC	1 cut(s)	800
Psp5II	RGGWCCY	1 cut(s)	204
Psp6I	CCWGG	3 cut(s)	18, 809, 2926
PspEI	GGTNACC	1 cut(s)	901
PspFI	CCCAGC	2 cut(s)	927, 2580
PspGI	CCWGG	3 cut(s)	18, 809, 2926
PspN4I	GGNNCC	6 cut(s)	462, 808, 883, 1270, 2049, 2789
PspPI	GGNCC	3 cut(s)	204, 1202, 1871
PspPPI	RGGWCCY	1 cut(s)	204
PspXI	VCTCGAGB	1 cut(s)	345
PstI	CTGCAG	3 cut(s)	1378, 2113, 2383
PstNI	CAGNNNCTG	1 cut(s)	1220
PsuI	RGATCY	2 cut(s)	460, 1072
PvuII	CAGCTG	3 cut(s)	927, 1217, 1646
RsaI	GTAC	5 cut(s)	30, 768, 1096, 1303, 2541
RsaNI	GTAC	5 cut(s)	29, 767, 1095, 1302, 2540
RseI	CAYNNNNRTG	3 cut(s)	1050, 1125, 1485
SacI	GAGCTC	1 cut(s)	800
SaqAI	TTAA	6 cut(s)	330, 2271, 2349, 2525, 2546, 2685
Sau3AI	GATC	8 cut(s)	245, 380, 460, 1072, 1285, 1804, 2196, 2860
Sau96I	GGNCC	3 cut(s)	204, 1202, 1871
ScaI	AGTACT	1 cut(s)	768
SchI	GAGTC	5 cut(s)	412, 947, 994, 2220, 2752
ScrFI	CCNGG	3 cut(s)	20, 811, 2928
SduI	GDGCHC	3 cut(s)	392, 800, 2808
SexAI	ACCWGGT	1 cut(s)	2926
SfaNI	GCATC	7 cut(s)	243, 605, 653, 709, 808, 2372, 2593
SfcI	CTRYAG	3 cut(s)	1374, 2109, 2379
Sfr274I	CTCGAG	1 cut(s)	345
SfuI	TTCGAA	1 cut(s)	1775
SinI	GGWCC	3 cut(s)	204, 1202, 1871
SlaI	CTCGAG	1 cut(s)	345
SmiMI	CAYNNNNRTG	3 cut(s)	1050, 1125, 1485
SmlI	CTYRAG	4 cut(s)	329, 345, 2270, 2495
SmoI	CTYRAG	4 cut(s)	329, 345, 2270, 2495
SpeI	ACTAGT	1 cut(s)	1418
SphI	GCATGC	3 cut(s)	1713, 2016, 2774
SseBI	AGGCCT	1 cut(s)	2565
SsiI	CCGC	7 cut(s)	120, 148, 777, 1713, 1886, 2908, 3061
SspI	AATATT	1 cut(s)	141
SspMI	CTAG	7 cut(s)	672, 690, 1404, 1419, 1502, 1787, 1997
SstI	GAGCTC	1 cut(s)	800
StuI	AGGCCT	1 cut(s)	2565
StyD4I	CCNGG	3 cut(s)	18, 809, 2926
StyI	CCWWGG	3 cut(s)	207, 2043, 2251
TaaI	ACNGT	7 cut(s)	439, 850, 962, 1206, 1573, 1991, 2331
TaiI	ACGT	2 cut(s)	430, 1975
TaqI	TCGA	9 cut(s)	7, 42, 346, 421, 634, 966, 1671, 1775, 2863
TatI	WGTACW	1 cut(s)	766
TauI	GCSGC	2 cut(s)	123, 3064
TfiI	GAWTC	7 cut(s)	581, 842, 1144, 1397, 2384, 2501, 2865
Tru1I	TTAA	6 cut(s)	330, 2271, 2349, 2525, 2546, 2685
Tru9I	TTAA	6 cut(s)	330, 2271, 2349, 2525, 2546, 2685
TscAI	CASTG	9 cut(s)	122, 444, 556, 855, 1145, 1375, 2322, 2383, 3013
TseFI	GTSAC	9 cut(s)	439, 901, 956, 1136, 1163, 1222, 1943, 1973, 2176
Tsp45I	GTSAC	9 cut(s)	439, 901, 956, 1136, 1163, 1222, 1943, 1973, 2176
TspDTI	ATGAA	9 cut(s)	318, 1028, 1410, 1419, 1503, 1853, 1889, 2664, 2985
TspGWI	ACGGA	3 cut(s)	830, 882, 1809
TspRI	CASTG	9 cut(s)	122, 444, 556, 855, 1145, 1375, 2322, 2383, 3013
Vha464I	CTTAAG	2 cut(s)	329, 2270
VpaK11BI	GGWCC	3 cut(s)	204, 1202, 1871
XagI	CCTNNNNNAGG	1 cut(s)	2451
XapI	RAATTY	2 cut(s)	224, 637
XceI	RCATGY	6 cut(s)	893, 1035, 1713, 1869, 2016, 2774
XhoI	CTCGAG	1 cut(s)	345
XmiI	GTMKAC	1 cut(s)	2438
XmnI	GAANNNNTTC	3 cut(s)	654, 1771, 2490
XspI	CTAG	7 cut(s)	672, 690, 1404, 1419, 1502, 1787, 1997
ZrmI	AGTACT	1 cut(s)	768
Zsp2I	ATGCAT	1 cut(s)	598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.