AT1G70290

Alpha,alpha-trehalose-phosphate synthase (UDP-forming)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
26470795 .. 26474833
4039 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G70290.2

Sequence Viewer

Length: 2571 bp
ATGGTGTCAAGATCTTGTGCTAATTTTCTAGACTTATCATCTTGGGACCTTTTAGATTTTCCTCAAACTCCACGAACTCTTCCACGCGTCATGACTGTTCCGGGAATCATCACCGACGTAGACGGTGATACAACCTCCGAAGTAACTTCTACCTCCGGTGGTTCACGTGAGAGGAAGATCATTGTAGCTAACATGTTACCACTCCAATCTAAAAGAGATGCAGAAACTGGTAAATGGTGTTTTAACTGGGACGAAGACTCTCTCCAGTTACAACTTAGAGATGGGTTCTCTTCAGAAACAGAGTTTCTCTACGTTGGATCACTTAACGTAGACATCGAAACTAACGAACAAGAAGAAGTTTCACAGAAGCTTTTAGAGGAATTTAACTGCGTTGCAACGTTTTTGTCTCAAGAGTTGCAAGAAATGTTCTATCTTGGTTTCTGTAAACATCAGTTATGGCCACTCTTTCATTACATGCTTCCAATGTTTCCTGATCATGGTGATCGTTTTGATCGACGTCTATGGCAAGCTTATGTATCAGCCAACAAGATATTTTCAGATAGAGTTATGGAAGTTATCAACCCTGAGGATGATTACGTTTGGATTCAAGATTATCATCTTATGGTTCTTCCTACTTTCTTGAGGAAACGTTTTAATAGGATCAAACTCGGTTTCTTCCTTCATAGTCCGTTTCCTTCTTCAGAGATTTACCGCACATTGCCTGTTCGTGACGAGATTTTGAGAGGTTTGTTGAATTGTGATCTCATTGGTTTCCATACGTTTGATTACGCGAGGCATTTCTTGTCTTGTTGTAGTAGAATGCTTGGTCTTGATTACGAGTCTAAGCGCGGTCACATAGGTCTTGATTACTTTGGTAGGACTGTGTATATCAAAATACTTCCTGTTGGTGTTCATATGGGTAGATTGGAGTCTGTTTTGAGTCTTGATTCTACTGCGGCGAAGACGAAAGAGATTCAAGAACAGTTTAAAGGGAAGAAGCTTGTTCTTGGTATCGATGATATGGATATATTTAAAGGGATAAGCTTAAAGCTTATAGCAATGGAACATCTCTTTGAGACTTATTGGCATTTGAAAGGGAAAGTTGTTCTTGTTCAGATAGTGAACCCTGCAAGATCTTCTGGTAAAGATGTTGAAGAAGCGAAGAGGGAGACGTATGAGACTGCGAGGAGGATCAATGAGCGTTACGGTACTTCTGACTATAAGCCGATAGTTTTGATCGATCGTCTTGTTCCACGTTCTGAGAAAACCGCGTATTATGCTGCAGCAGATTGTTGCTTAGTGAATGCAGTGAGAGATGGTATGAACTTAGTTCCTTATAAGTATATCGTCTGCAGGCAGGGGACTCGAAGTAATAAGGCCGTTGTGGATTCATCGCCTCGCACAAGCACTCTTGTCGTGTCTGAGTTTATTGGATGCTCACCTTCTTTGAGTGGTGCCATTAGGGTGAATCCATGGGATGTGGATGCTGTTGCTGAAGCGGTAAACTCGGCTCTTAAAATGAGTGAGACTGAGAAGCAACTACGGCATGAGAAACATTATCATTATATTAGCACTCATGATGTTGGTTATTGGGCAAAGAGCTTTATGCAGGATCTTGAGAGAGCGTGCCGAGATCATTATAGTAAACGTTGTTGGGGGATTGGTTTTGGTTTGGGGTTCAGAGTTTTGTCACTCTCTCCAAGTTTTAGGAAGCTATCTGTGGAACACATTGTTCCAGTTTATAGAAAAACACAGAGAAGAGCTATATTTCTTGATTATGATGGTACTCTTGTTCCTGAAAGCTCCATTGTTCAAGATCCAAGCAACGAGGTTGTCTCTGTTCTGAAAGCTCTCTGTGAAGATCCGAATAACACGGTGTTTATTGTTAGTGGAAGAGGTAGAGAGTCTCTGAGCAATTGGCTATCTCCTTGTGAAAATCTTGGAATAGCAGCTGAACATGGATACTTCATTAGATGGAAGAGCAAAGATGAGTGGGAGACTTGTTATTCGCCTACGGATACAGAGTGGAGGTCAATGGTGGAACCGGTTATGAGATCGTATATGGAGGCAACAGATGGGACGAGTATAGAGTTTAAAGAAAGTGCTTTGGTGTGGCACCATCAAGACGCAGATCCTGACTTTGGATCATGTCAAGCTAAGGAGATGCTTGATCATCTAGAGAGTGTTCTCGCCAATGAGCCTGTGGTTGTCAAGAGAGGTCAACACATCGTTGAAGTCAAACCACAAGGTGTAAGCAAAGGTCTAGCTGCGGAGAAAGTAATCCGAGAAATGGTAGAACGCGGGGAGCCACCGGAAATGGTGATGTGCATAGGAGACGATAGATCAGACGAAGACATGTTTGAGAGCATATTAAGCACAGTGACAAATCCGGAACTTCTTGTGCAGCCAGAGGTTTTTGCATGCACGGTTGGAAGAAAACCAAGCAAAGCTAAATACTTCTTGGACGATGAAGCCGACGTGCTTAAGCTCCTAAGAGGTCTTGGAGACTCATCATCGAGCTTAAAACCTAGTTCTTCTCACACACAAGTTGCATTTGAAAGCATCGTTTAA

Protein Analysis

856

Amino Acids

97.56

Weight (kDa)

5.6

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_20 PF00982 58 - 250 3.2e-71 Glycosyltransferase family 20
Glyco_transf_20 PF00982 251 - 502 3e-95 Glycosyltransferase family 20
Trehalose_PPase PF02358 552 - 786 8.9e-89 Trehalose-phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1338
AatII GACGTC 1 cut(s) 520
AccB1I GGYRCC 2 cut(s) 1454, 2115
AccI GTMKAC 2 cut(s) 120, 330
AccII CGCG 5 cut(s) 87, 791, 849, 1271, 2301
AccIII TCCGGA 1 cut(s) 2389
AciI CCGC 7 cut(s) 712, 849, 956, 1269, 1499, 2270, 2301
AclI AACGTT 3 cut(s) 398, 649, 1648
AclWI GGATC 8 cut(s) 325, 668, 1199, 1620, 1811, 1856, 2126, 2152
AcoI YGGCCR 1 cut(s) 458
AcsI RAATTY 1 cut(s) 380
AcuI CTGAAG 3 cut(s) 276, 684, 1515
AcvI CACGTG 1 cut(s) 167
AcyI GRCGYC 1 cut(s) 517
AdeI CACNNNGTG 1 cut(s) 2249
AfaI GTAC 2 cut(s) 1210, 1786
AfiI CCNNNNNNNGG 3 cut(s) 497, 2141, 2290
AflII CTTAAG 1 cut(s) 2483
AflIII ACRYGT 3 cut(s) 85, 192, 2355
AgeI ACCGGT 1 cut(s) 2044
AgsI TTSAA 8 cut(s) 608, 754, 977, 1093, 1154, 1814, 2234, 2558
AjiI CACGTC 1 cut(s) 2479
AlwI GGATC 8 cut(s) 325, 668, 1199, 1620, 1811, 1856, 2126, 2152
AlwNI CAGNNNCTG 2 cut(s) 227, 2135
Aor13HI TCCGGA 1 cut(s) 2389
AoxI GGCC 2 cut(s) 458, 1377
ApeKI GCWGC 5 cut(s) 1280, 1283, 1949, 2267, 2404
ApoI RAATTY 1 cut(s) 380
ArsI GACNNNNNNTTYG 2 cut(s) 1990, 2022
AsiGI ACCGGT 1 cut(s) 2044
AspLEI GCGC 1 cut(s) 849
AspS9I GGNCC 1 cut(s) 46
AsuC2I CCSGG 1 cut(s) 102
AsuHPI GGTGA 6 cut(s) 103, 137, 512, 1431, 1477, 2332
AvaII GGWCC 1 cut(s) 46
AxyI CCTNAGG 1 cut(s) 585
BaeI ACNNNNGTAYC 2 cut(s) 1776, 1809
BalI TGGCCA 1 cut(s) 460
BanI GGYRCC 2 cut(s) 1454, 2115
BbrPI CACGTG 1 cut(s) 167
BbsI GAAGAC 3 cut(s) 261, 968, 2358
BbvI GCAGC 5 cut(s) 1267, 1295, 1961, 2254, 2416
BccI CCATC 6 cut(s) 275, 1310, 1775, 1968, 2069, 2127
BceAI ACGGC 2 cut(s) 1364, 1559
BcgI CGANNNNNNTGC 4 cut(s) 1346, 1380, 1396, 1430
BciVI GTATCC 2 cut(s) 1955, 2011
BclI TGATCA 2 cut(s) 493, 2170
BcnI CCSGG 1 cut(s) 102
BfaI CTAG 4 cut(s) 29, 2177, 2264, 2529
BfmI CTRYAG 2 cut(s) 1281, 1351
BfrI CTTAAG 1 cut(s) 2483
BfuI GTATCC 2 cut(s) 1955, 2011
BglII AGATCT 2 cut(s) 11, 1133
BisI GCNGC 6 cut(s) 957, 1281, 1284, 1950, 2268, 2405
BlsI GCNGC 6 cut(s) 958, 1282, 1285, 1951, 2269, 2406
Bme1390I CCNGG 1 cut(s) 102
Bme18I GGWCC 1 cut(s) 46
BmgBI CACGTC 1 cut(s) 2479
BmgT120I GGNCC 1 cut(s) 46
BmiI GGNNCC 5 cut(s) 47, 1456, 2043, 2117, 2307
BmrFI CCNGG 1 cut(s) 102
BmrI ACTGGG 1 cut(s) 256
BmsI GCATC 4 cut(s) 208, 1424, 1474, 2154
BmuI ACTGGG 1 cut(s) 256
BpiI GAAGAC 3 cut(s) 261, 968, 2358
BplI GAGNNNNNCTC 2 cut(s) 1820, 1852
BpmI CTGGAG 1 cut(s) 248
Bpu10I CCTNAGC 1 cut(s) 2157
BpuEI CTTGAG 3 cut(s) 393, 661, 1637
BpuMI CCSGG 1 cut(s) 102
Bsa29I ATCGAT 2 cut(s) 1014, 1239
BsaAI YACGTR 1 cut(s) 167
BsaBI GATNNNNATC 1 cut(s) 615
BsaHI GRCGYC 1 cut(s) 517
BsaJI CCNNGG 1 cut(s) 1472
BsaWI WCCGGW 4 cut(s) 155, 2044, 2311, 2389
Bsc4I CCNNNNNNNGG 3 cut(s) 497, 2141, 2290
Bse118I RCCGGY 1 cut(s) 2044
Bse1I ACTGG 4 cut(s) 232, 251, 265, 1736
Bse21I CCTNAGG 1 cut(s) 585
Bse3DI GCAATG 2 cut(s) 716, 1065
Bse8I GATNNNNATC 1 cut(s) 615
BseAI TCCGGA 1 cut(s) 2389
BseCI ATCGAT 2 cut(s) 1014, 1239
BseDI CCNNGG 1 cut(s) 1472
BseGI GGATG 4 cut(s) 595, 1439, 1483, 1489
BseJI GATNNNNATC 1 cut(s) 615
BseLI CCNNNNNNNGG 3 cut(s) 497, 2141, 2290
BseMI GCAATG 2 cut(s) 716, 1065
BseMII CTCAG 5 cut(s) 576, 1251, 1413, 1521, 1901
BseNI ACTGG 4 cut(s) 232, 251, 265, 1736
BseRI GAGGAG 1 cut(s) 1201
BseXI GCAGC 5 cut(s) 1267, 1295, 1961, 2254, 2416
BsgI GTGCAG 1 cut(s) 2423
Bsh1236I CGCG 5 cut(s) 87, 791, 849, 1271, 2301
Bsh1285I CGRYCG 1 cut(s) 1243
BshFI GGCC 2 cut(s) 460, 1379
BshNI GGYRCC 2 cut(s) 1454, 2115
BshTI ACCGGT 1 cut(s) 2044
BshVI ATCGAT 2 cut(s) 1014, 1239
BsiEI CGRYCG 1 cut(s) 1243
BsiSI CCGG 5 cut(s) 101, 156, 2045, 2312, 2390
BslFI GGGAC 4 cut(s) 59, 263, 1375, 2092
BslI CCNNNNNNNGG 3 cut(s) 497, 2141, 2290
BsmBI CGTCTC 2 cut(s) 1163, 2328
BsmFI GGGAC 4 cut(s) 59, 263, 1375, 2092
BsmI GAATGC 2 cut(s) 825, 1309
BsnI GGCC 2 cut(s) 460, 1379
Bsp13I TCCGGA 1 cut(s) 2389
Bsp19I CCATGG 1 cut(s) 1472
BspACI CCGC 7 cut(s) 712, 849, 956, 1269, 1499, 2270, 2301
BspANI GGCC 2 cut(s) 460, 1379
BspCNI CTCAG 5 cut(s) 577, 1252, 1414, 1522, 1902
BspDI ATCGAT 2 cut(s) 1014, 1239
BspEI TCCGGA 1 cut(s) 2389
BspFNI CGCG 5 cut(s) 87, 791, 849, 1271, 2301
BspHI TCATGA 2 cut(s) 90, 1576
BspLI GGNNCC 5 cut(s) 47, 1456, 2043, 2117, 2307
BspMAI CTGCAG 2 cut(s) 1285, 1355
BspPI GGATC 8 cut(s) 325, 668, 1199, 1620, 1811, 1856, 2126, 2152
BspQI GCTCTTC 2 cut(s) 1753, 1973
BspT107I GGYRCC 2 cut(s) 1454, 2115
BspTI CTTAAG 1 cut(s) 2483
BsrDI GCAATG 2 cut(s) 716, 1065
BsrFI RCCGGY 1 cut(s) 2044
BsrI ACTGG 4 cut(s) 232, 251, 265, 1736
BssAI RCCGGY 1 cut(s) 2044
BssECI CCNNGG 1 cut(s) 1472
BssNI GRCGYC 1 cut(s) 517
BssT1I CCWWGG 1 cut(s) 1472
Bst4CI ACNGT 8 cut(s) 97, 125, 883, 984, 1208, 1876, 2380, 2428
Bst6I CTCTTC 6 cut(s) 84, 295, 1157, 1753, 1888, 1973
BstACI GRCGYC 1 cut(s) 517
BstAFI CTTAAG 1 cut(s) 2483
BstBAI YACGTR 1 cut(s) 167
BstC8I GCNNGC 4 cut(s) 528, 1355, 1627, 2422
BstDSI CCRYGG 1 cut(s) 1472
BstF5I GGATG 4 cut(s) 595, 1439, 1483, 1489
BstFNI CGCG 5 cut(s) 87, 791, 849, 1271, 2301
BstHHI GCGC 1 cut(s) 849
BstMCI CGRYCG 1 cut(s) 1243
BstMWI GCNNNNNNNGC 3 cut(s) 1277, 1543, 2373
BstNSI RCATGY 4 cut(s) 196, 478, 2359, 2424
BstSCI CCNGG 1 cut(s) 100
BstSFI CTRYAG 2 cut(s) 1281, 1351
BstUI CGCG 5 cut(s) 87, 791, 849, 1271, 2301
BstV1I GCAGC 5 cut(s) 1267, 1295, 1961, 2254, 2416
BstV2I GAAGAC 3 cut(s) 261, 968, 2358
BstX2I RGATCY 6 cut(s) 11, 1133, 1612, 1816, 1861, 2131
BstYI RGATCY 6 cut(s) 11, 1133, 1612, 1816, 1861, 2131
Bsu15I ATCGAT 2 cut(s) 1014, 1239
Bsu36I CCTNAGG 1 cut(s) 585
BsuI GTATCC 2 cut(s) 1955, 2011
BsuRI GGCC 2 cut(s) 460, 1379
BsuTUI ATCGAT 2 cut(s) 1014, 1239
BtgI CCRYGG 1 cut(s) 1472
BtgZI GCGATG 1 cut(s) 1377
BtrI CACGTC 1 cut(s) 2479
BtsCI GGATG 4 cut(s) 595, 1439, 1483, 1489
BtsI GCAGTG 1 cut(s) 1314
BtsIMutI CAGTG 2 cut(s) 1314, 2385
Cac8I GCNNGC 4 cut(s) 528, 1355, 1627, 2422
CaiI CAGNNNCTG 2 cut(s) 227, 2135
CciI TCATGA 2 cut(s) 90, 1576
CfoI GCGC 1 cut(s) 849
Cfr10I RCCGGY 1 cut(s) 2044
Cfr13I GGNCC 1 cut(s) 46
ClaI ATCGAT 2 cut(s) 1014, 1239
CseI GACGC 2 cut(s) 76, 2135
Csp6I GTAC 2 cut(s) 1209, 1785
CspAI ACCGGT 1 cut(s) 2044
CviQI GTAC 2 cut(s) 1209, 1785
DraI TTTAAA 3 cut(s) 988, 1033, 2095
DraIII CACNNNGTG 1 cut(s) 2249
EaeI YGGCCR 1 cut(s) 458
Eam1104I CTCTTC 6 cut(s) 84, 295, 1157, 1753, 1888, 1973
EarI CTCTTC 6 cut(s) 84, 295, 1157, 1753, 1888, 1973
Eco130I CCWWGG 1 cut(s) 1472
Eco47I GGWCC 1 cut(s) 46
Eco57I CTGAAG 3 cut(s) 276, 684, 1515
Eco72I CACGTG 1 cut(s) 167
Eco81I CCTNAGG 1 cut(s) 585
EcoO109I RGGNCCY 1 cut(s) 46
EcoT14I CCWWGG 1 cut(s) 1472
ErhI CCWWGG 1 cut(s) 1472
Esp3I CGTCTC 2 cut(s) 1163, 2328
FalI AAGNNNNNCTT 2 cut(s) 1092, 1124
FaqI GGGAC 4 cut(s) 59, 263, 1375, 2092
FauI CCCGC 1 cut(s) 2294
FauNDI CATATG 1 cut(s) 915
FbaI TGATCA 2 cut(s) 493, 2170
FblI GTMKAC 2 cut(s) 120, 330
Fnu4HI GCNGC 6 cut(s) 957, 1281, 1284, 1950, 2268, 2405
FokI GGATG 4 cut(s) 602, 1446, 1490, 1496
Fsp4HI GCNGC 6 cut(s) 957, 1281, 1284, 1950, 2268, 2405
FspBI CTAG 4 cut(s) 29, 2177, 2264, 2529
GlaI GCGC 1 cut(s) 848
GluI GCNGC 6 cut(s) 957, 1281, 1284, 1950, 2268, 2405
GsuI CTGGAG 1 cut(s) 248
HaeIII GGCC 2 cut(s) 460, 1379
HapII CCGG 5 cut(s) 101, 156, 2045, 2312, 2390
HgaI GACGC 2 cut(s) 76, 2135
HhaI GCGC 1 cut(s) 849
Hin1I GRCGYC 1 cut(s) 517
Hin6I GCGC 1 cut(s) 847
HinP1I GCGC 1 cut(s) 847
HincII GTYRAC 1 cut(s) 2222
HindII GTYRAC 1 cut(s) 2222
HindIII AAGCTT 5 cut(s) 368, 528, 998, 1042, 1049
HpaII CCGG 5 cut(s) 101, 156, 2045, 2312, 2390
HphI GGTGA 6 cut(s) 103, 137, 512, 1431, 1477, 2332
Hpy166II GTNNAC 8 cut(s) 121, 164, 331, 446, 1123, 1504, 1646, 2222
Hpy8I GTNNAC 8 cut(s) 121, 164, 331, 446, 1123, 1504, 1646, 2222
Hpy99I CGWCG 3 cut(s) 119, 519, 2480
HpyAV CCTTC 3 cut(s) 689, 705, 1452
HpyCH4III ACNGT 8 cut(s) 97, 125, 883, 984, 1208, 1876, 2380, 2428
HpyF10VI GCNNNNNNNGC 3 cut(s) 1277, 1543, 2373
Hsp92I GRCGYC 1 cut(s) 517
HspAI GCGC 1 cut(s) 847
Kpn2I TCCGGA 1 cut(s) 2389
Ksp22I TGATCA 2 cut(s) 493, 2170
LguI GCTCTTC 2 cut(s) 1753, 1973
LmnI GCTCC 3 cut(s) 1808, 2305, 2493
Lsp1109I GCAGC 5 cut(s) 1267, 1295, 1961, 2254, 2416
LweI GCATC 4 cut(s) 208, 1424, 1474, 2154
MaeI CTAG 4 cut(s) 29, 2177, 2264, 2529
MaeIII GTNAC 8 cut(s) 142, 195, 267, 728, 851, 1202, 1689, 2380
MfeI CAATTG 1 cut(s) 1915
MflI RGATCY 6 cut(s) 11, 1133, 1612, 1816, 1861, 2131
MlsI TGGCCA 1 cut(s) 460
MluCI AATT 4 cut(s) 22, 380, 754, 1915
MluI ACGCGT 1 cut(s) 85
MluNI TGGCCA 1 cut(s) 460
MlyI GAGTC 7 cut(s) 251, 848, 938, 949, 1357, 1913, 2501
MmeI TCCRAC 2 cut(s) 295, 2410
Mox20I TGGCCA 1 cut(s) 460
MroI TCCGGA 1 cut(s) 2389
MscI TGGCCA 1 cut(s) 460
MslI CAYNNNNRTG 1 cut(s) 1463
Msp20I TGGCCA 1 cut(s) 460
MspA1I CMGCKG 1 cut(s) 1952
MspCI CTTAAG 1 cut(s) 2483
MspI CCGG 5 cut(s) 101, 156, 2045, 2312, 2390
MspR9I CCNGG 1 cut(s) 102
MunI CAATTG 1 cut(s) 1915
Mva1269I GAATGC 2 cut(s) 825, 1309
MvnI CGCG 5 cut(s) 87, 791, 849, 1271, 2301
MwoI GCNNNNNNNGC 3 cut(s) 1277, 1543, 2373
NciI CCSGG 1 cut(s) 102
NcoI CCATGG 1 cut(s) 1472
NdeI CATATG 1 cut(s) 915
NlaIV GGNNCC 5 cut(s) 47, 1456, 2043, 2117, 2307
NmeAIII GCCGAG 2 cut(s) 1487, 1655
NmuCI GTSAC 4 cut(s) 728, 851, 1689, 2380
NspI RCATGY 4 cut(s) 196, 478, 2359, 2424
PaeI GCATGC 1 cut(s) 2424
PagI TCATGA 2 cut(s) 90, 1576
PciI ACATGT 2 cut(s) 192, 2355
PciSI GCTCTTC 2 cut(s) 1753, 1973
PcsI WCGNNNNNNNCGW 4 cut(s) 333, 342, 511, 2472
PctI GAATGC 2 cut(s) 825, 1309
PfeI GAWTC 6 cut(s) 105, 604, 947, 973, 1388, 1468
PfoI TCCNGGA 1 cut(s) 100
PinAI ACCGGT 1 cut(s) 2044
PkrI GCNGC 6 cut(s) 958, 1282, 1285, 1951, 2269, 2406
Ple19I CGATCG 1 cut(s) 1243
PleI GAGTC 7 cut(s) 251, 847, 937, 948, 1357, 1912, 2501
PmaCI CACGTG 1 cut(s) 167
PmlI CACGTG 1 cut(s) 167
PpsI GAGTC 7 cut(s) 251, 847, 937, 948, 1357, 1912, 2501
Ppu21I YACGTR 1 cut(s) 167
PpuMI RGGWCCY 1 cut(s) 46
PscI ACATGT 2 cut(s) 192, 2355
PsiI TTATAA 1 cut(s) 1338
Psp1406I AACGTT 3 cut(s) 398, 649, 1648
Psp5II RGGWCCY 1 cut(s) 46
PspCI CACGTG 1 cut(s) 167
PspN4I GGNNCC 5 cut(s) 47, 1456, 2043, 2117, 2307
PspPI GGNCC 1 cut(s) 46
PspPPI RGGWCCY 1 cut(s) 46
PstI CTGCAG 2 cut(s) 1285, 1355
PstNI CAGNNNCTG 2 cut(s) 227, 2135
PsuI RGATCY 6 cut(s) 11, 1133, 1612, 1816, 1861, 2131
PvuI CGATCG 1 cut(s) 1243
PvuII CAGCTG 1 cut(s) 1952
RsaI GTAC 2 cut(s) 1210, 1786
RsaNI GTAC 2 cut(s) 1209, 1785
RseI CAYNNNNRTG 1 cut(s) 1463
SapI GCTCTTC 2 cut(s) 1753, 1973
SatI GCNGC 6 cut(s) 957, 1281, 1284, 1950, 2268, 2405
Sau96I GGNCC 1 cut(s) 46
SchI GAGTC 7 cut(s) 251, 848, 938, 949, 1357, 1913, 2501
ScrFI CCNGG 1 cut(s) 102
SfaNI GCATC 4 cut(s) 208, 1424, 1474, 2154
SfcI CTRYAG 2 cut(s) 1281, 1351
SinI GGWCC 1 cut(s) 46
SmiMI CAYNNNNRTG 1 cut(s) 1463
SmlI CTYRAG 4 cut(s) 408, 640, 1616, 2483
SmoI CTYRAG 4 cut(s) 408, 640, 1616, 2483
SphI GCATGC 1 cut(s) 2424
Sse9I AATT 4 cut(s) 22, 380, 754, 1915
SsiI CCGC 7 cut(s) 712, 849, 956, 1269, 1499, 2270, 2301
SspMI CTAG 4 cut(s) 29, 2177, 2264, 2529
StyD4I CCNGG 1 cut(s) 100
StyI CCWWGG 1 cut(s) 1472
TaaI ACNGT 8 cut(s) 97, 125, 883, 984, 1208, 1876, 2380, 2428
TaqI TCGA 6 cut(s) 336, 514, 1014, 1239, 1366, 2516
TasI AATT 4 cut(s) 22, 380, 754, 1915
TauI GCSGC 1 cut(s) 959
TfiI GAWTC 6 cut(s) 105, 604, 947, 973, 1388, 1468
TscAI CASTG 2 cut(s) 1314, 2385
TseFI GTSAC 4 cut(s) 728, 851, 1689, 2380
TseI GCWGC 5 cut(s) 1280, 1283, 1949, 2267, 2404
Tsp45I GTSAC 4 cut(s) 728, 851, 1689, 2380
TspDTI ATGAA 7 cut(s) 458, 671, 902, 1337, 1380, 1957, 2484
TspGWI ACGGA 2 cut(s) 678, 2030
TspRI CASTG 2 cut(s) 1314, 2385
Vha464I CTTAAG 1 cut(s) 2483
VpaK11BI GGWCC 1 cut(s) 46
XapI RAATTY 1 cut(s) 380
XbaI TCTAGA 2 cut(s) 28, 2176
XceI RCATGY 4 cut(s) 196, 478, 2359, 2424
XcmI CCANNNNNNNNNTGG 1 cut(s) 2200
XmiI GTMKAC 2 cut(s) 120, 330
XspI CTAG 4 cut(s) 29, 2177, 2264, 2529
ZraI GACGTC 1 cut(s) 518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.