Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001202

Physical Location & Seq

Genomic Coordinates Forward (+)

11722401 .. 11724752

Gene Structure 2352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG143700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGGTTTTGTAAGCAATATTTGTGGCCACTTTTTTCACTACATGCTTCCCATGTGCCTGGACCACAGCAATCGCTTTGACAGGCTACTGTGGCAGGCTTATGTTTCTGCTAACAAGATATATGCCGATAAAGTCATGGAGGTGATTAATCCTGAAAATGATTATGTTTGGGTTCATGACTATCACCTTATGATTCTTCCCACTTTTTTGAGAAGGCGTTTTACGCGAGTTAAGCTTGGGTTTTTTCTACATAGTCCCTTCCCCTCATCAGAAATCTACAGGACTTTGCCTGTCAGAGATGAAATACTGAGAGCCCTGCTAAATGTAGATTTGATTGGTTTTCATACATTTGATTATGCTCGCCACTTTCTATCTTGCTGCAGTAGAATGCTTGGCCTTGATTATGAATCAAAGCGAGGTTACATTGGACTCGAATATTTTGGCCGCACAGTGTACGTTAAGATTCTGCCAGTAGGGATACACATGGGTCGACTTCAATCTGCTTTAAATCATCCCTCTTCTTCCATGAAGGCCAAAGAGATTCAGGAACAGTTTAAGGGGAAGAAGCTTATTGTTGGCGTGGATGACATGGACATATTCAAAGGGATCAGCCTAAAGTTATTGGCCATGGAACAACTTCTGCAGCAGCACCCAGAGTTGCGGGGCAAGGTAGTCCTGGTTCAAATTGTAAACCCTGCAAGGAGCACCGGGAAAGATGTTCAGGAAGCAAAAAAGGAAACATATTCAACGACCAGAAGGATAAATGAAGTTTTCGGCTTTCCAGGCTACGAACCAGTTGTTTTGATTGATCGCAACGTTCCTTTCCATGAGAAGACTGCCTATTACTCATTGGCTGAATGCTGCATTGTCAATGCTGTAAGGGATGGCATGAACCTAATCCCTTACAAGTATATTATTTGCAGGCAGGGGACTCCAAATATGGATAAAACTTTAGGAATTCCCTTGGATTCCCCTCATACAAGTACACTTGTTATTTCAGAGTTCATAGGTTGCTCACCATCTTTGAGTGGAGCAATAAGGGTGAACCCCTGGAACATTGAAGCTGTGGCTGATGCACTAAATGTGGCGATCACAATGCCTGATTTAGAAAAGCAGCTGCGGCATGAGAAACATTACAGGTATGTGAGCTCTCATGATGTGGCTTATTGGGCGCGCAGTTTTGTACAGGACTTGGAGCGAGCTTGCAAGGATCACTACAGAAAACGGTGTTGGGGAATTGGTTTTGGTCTGCAGTTTAGAATCTTGTCTCTTTCTCCAAGTTTTAGGAAGCTTTCCATTGACCATATCCTCTCTGCATATAAAAGGACAAATCGAAGGGCAATCTTCTTGGATTATGATGGAACAATAATGCCTGAAACTTCCATTGTTAAGACGCCAAGTCCTGAAGTCATTTCTGTTCTGAACAACCTTTGCAGTGACCCCAAGAACACTGTGTTTATAGTTAGTGGTAGGGGTCAAGACTCTCTTAGCGAATGGTTTTCTCAGTGTGAGAATCTTGGCATAGCAGCGGAGCATGGATACTTCATAAGATGGAGTAGGAAGTCCAATTGGGAAACGAGTTCCTTAGCAATAGATTTGGACTGGAAAAGAATTGCAGAACCTGTGATGAGTTTATACACAGAGGCAACCGATGGCTCCTACATAGAGAGCAAGGAGAGTGCCTTGGTATGGCACCATCTAGATGCTGATCCTGATTTTGGGTCCTGCCAGGCCAAGGAGATGTTGGATCATCTTGAAAATGTCCTTGCGAACGAGCCTGTAGTTGTTAAAAGGGGACAACATATTGTCGAAGTAAAGCCACAGGGAGTTACTAAAGGCTTGGTTGCAGAGAAAGTTCTCTCCATGATGATTGGTACAGGGAAAGCACCGGATTTTGTTTTGTGCATTGGGGATGATAGATCTGATGAGGACATGTTTGAAAGCATTTCGAGCACAGCCTATAGTTCATGTCAAAATGTACCTCCTGAGATCTTTGCATGCACTGTTGGCCAAAAACCAAGTAAAGCTAGGTACTACCTAGACGATACAGTTGATGTCATGACATTGCTTCACGGCCTCACTACTGATTCAAGTCTCAAGTCAAGGTGTAATGCAGAATTCGATCAAGTCTCTTTCGAGCATATTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

716

Amino Acids

81.54

Weight (kDa)

6.59

Isoelectric Point (pI)

48.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	6 - 399	4.5e-162	Glycosyltransferase family 20
Trehalose_PPase	PF02358	449 - 683	5.9e-88	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23870 AT1G60140 AT1G60140 AT1G60140 AT1G60140 AT1G60140 AT1G60140 AT1G70290 AT1G70290
fragaria_vesca	FvH4_4g34800 FvH4_4g34800 FvH4_4g34800 FvH4_4g34800 FvH4_4g34800 FvH4_4g34800 FvH4_4g34800 FvH4_5g05100 FvH4_5g05100 FvH4_5g05100 FvH4_5g05100 FvH4_5g05100 FvH4_5g05100 FvH4_5g05100 FvH4_5g05100 FvH4_5g05100
malus_domestica	MD00G1171800.v1.1 MD13G1089600.v1.1 MD14G1183700.v1.1 MD16G1089800.v1.1
prunus_persica	Prupe.1G256200_v2.0.a1 Prupe.5G176400_v2.0.a1
pyrus_communis	pycom06g15770 pycom13g07810 pycom14g15280 pycom16g07690
rosa_chinensis	RchiOBHm_Chr4g0444141 RchiOBHm_Chr7g0193901
rosa_laevigata	RLG00000004229 RLG00000004235 RLG00000005852
rosa_multiflora	Rmu_co8448227.1_g000001 Rmu_sc0012638.1_g000011
rosa_roxburghii	Rroxscaffold_3G00261720 Rroxscaffold_5G00384730
rosa_rugosa	Rorug04G0350400 Rorug07G0012500 Rorug07G0012600 Rorug07G0012700
rosa_samantha	Rh4AG411000 Rh4BG422400 Rh4CG436800 Rh4DG417700 Rh7BG140000 Rh7CG143700
rosa_wichuraiana	Rw4G035310 Rw7G011900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1692
AccI	GTMKAC	1 cut(s)	490
AccII	CGCG	2 cut(s)	226, 1174
AciI	CCGC	4 cut(s)	445, 661, 1120, 1529
AclI	AACGTT	1 cut(s)	816
AclWI	GGATC	4 cut(s)	614, 1218, 1703, 1755
AcoI	YGGCCR	4 cut(s)	25, 442, 624, 2008
AcsI	RAATTY	2 cut(s)	957, 2117
AcuI	CTGAAG	1 cut(s)	1425
AcyI	GRCGYC	1 cut(s)	1394
AfaI	GTAC	6 cut(s)	455, 985, 1185, 1876, 1980, 2033
AfiI	CCNNNNNNNGG	3 cut(s)	1689, 1718, 1735
AflIII	ACRYGT	1 cut(s)	1932
AgsI	TTSAA	8 cut(s)	497, 601, 683, 747, 1061, 1757, 1940, 2091
AhdI	GACNNNNNGTC	1 cut(s)	1398
AjnI	CCWGG	5 cut(s)	57, 675, 781, 1049, 1728
AjuI	GAANNNNNNNTTGG	2 cut(s)	1213, 1245
AluBI	AGCT	8 cut(s)	235, 568, 1064, 1117, 1149, 1202, 1291, 2027
AluI	AGCT	8 cut(s)	235, 568, 1064, 1117, 1149, 1202, 1291, 2027
Alw21I	GWGCWC	3 cut(s)	707, 1151, 1955
Alw26I	GTCTC	3 cut(s)	1272, 2099, 2134
AlwI	GGATC	4 cut(s)	614, 1218, 1703, 1755
AlwNI	CAGNNNCTG	1 cut(s)	1622
AoxI	GGCC	8 cut(s)	25, 394, 442, 531, 624, 1731, 2008, 2074
ApeKI	GCWGC	7 cut(s)	378, 643, 646, 861, 1114, 1117, 1526
ApoI	RAATTY	2 cut(s)	957, 2117
AseI	ATTAAT	1 cut(s)	147
Asp700I	GAANNNNTTC	1 cut(s)	636
AspLEI	GCGC	2 cut(s)	1174, 1176
AspS9I	GGNCC	2 cut(s)	61, 1722
AsuC2I	CCSGG	1 cut(s)	709
AsuHPI	GGTGA	4 cut(s)	154, 176, 1008, 1054
AvaII	GGWCC	2 cut(s)	61, 1722
BalI	TGGCCA	3 cut(s)	27, 626, 2010
BanI	GGYRCC	1 cut(s)	1692
BanII	GRGCYC	2 cut(s)	316, 1151
BarI	GAAGNNNNNNTAC	2 cut(s)	205, 237
BbsI	GAAGAC	1 cut(s)	839
Bbv12I	GWGCWC	3 cut(s)	707, 1151, 1955
BbvI	GCAGC	7 cut(s)	365, 655, 658, 848, 1104, 1126, 1538
BccI	CCATC	6 cut(s)	878, 1027, 1352, 1545, 1646, 1704
BceAI	ACGGC	1 cut(s)	2089
BcgI	CGANNNNNNTGC	2 cut(s)	1078, 1112
BciT130I	CCWGG	5 cut(s)	59, 677, 783, 1051, 1730
BciVI	GTATCC	2 cut(s)	471, 1532
BcnI	CCSGG	1 cut(s)	709
BcoDI	GTCTC	3 cut(s)	1272, 2099, 2134
BfaI	CTAG	3 cut(s)	1700, 2028, 2039
BfmI	CTRYAG	7 cut(s)	277, 379, 641, 1216, 1250, 1779, 1960
BfuI	GTATCC	2 cut(s)	471, 1532
BglII	AGATCT	2 cut(s)	1919, 1989
BisI	GCNGC	9 cut(s)	379, 445, 644, 647, 862, 1115, 1118, 1121, 1527
BlsI	GCNGC	9 cut(s)	380, 446, 645, 648, 863, 1116, 1119, 1122, 1528
Bme1390I	CCNGG	6 cut(s)	59, 677, 709, 783, 1051, 1730
Bme18I	GGWCC	2 cut(s)	61, 1722
BmeRI	GACNNNNNGTC	1 cut(s)	1398
BmgT120I	GGNCC	2 cut(s)	61, 1722
BmiI	GGNNCC	3 cut(s)	1657, 1694, 1723
BmrFI	CCNGG	6 cut(s)	59, 677, 709, 783, 1051, 1730
BmsI	GCATC	2 cut(s)	1063, 1693
BpiI	GAAGAC	1 cut(s)	839
Bpu10I	CCTNAGC	1 cut(s)	1585
BpuEI	CTTGAG	1 cut(s)	2081
BpuMI	CCSGG	1 cut(s)	709
BsaBI	GATNNNNATC	1 cut(s)	1707
BsaHI	GRCGYC	1 cut(s)	1394
BsaJI	CCNNGG	5 cut(s)	627, 963, 1049, 1683, 1734
BsaWI	WCCGGW	1 cut(s)	1888
Bsc4I	CCNNNNNNNGG	3 cut(s)	1689, 1718, 1735
Bse1I	ACTGG	3 cut(s)	470, 794, 1607
Bse3DI	GCAATG	1 cut(s)	2063
Bse8I	GATNNNNATC	1 cut(s)	1707
BseBI	CCWGG	5 cut(s)	59, 677, 783, 1051, 1730
BseDI	CCNNGG	5 cut(s)	627, 963, 1049, 1683, 1734
BseGI	GGATG	4 cut(s)	511, 589, 889, 1918
BseJI	GATNNNNATC	1 cut(s)	1707
BseLI	CCNNNNNNNGG	3 cut(s)	1689, 1718, 1735
BseMI	GCAATG	1 cut(s)	2063
BseMII	CTCAG	3 cut(s)	299, 1517, 1977
BseNI	ACTGG	3 cut(s)	470, 794, 1607
BsePI	GCGCGC	1 cut(s)	1172
BseXI	GCAGC	7 cut(s)	365, 655, 658, 848, 1104, 1126, 1538
Bsh1236I	CGCG	2 cut(s)	226, 1174
BshFI	GGCC	8 cut(s)	27, 396, 444, 533, 626, 1733, 2010, 2076
BshNI	GGYRCC	1 cut(s)	1692
BsiHKAI	GWGCWC	3 cut(s)	707, 1151, 1955
BsiSI	CCGG	2 cut(s)	708, 1889
BslFI	GGGAC	3 cut(s)	240, 943, 1809
BslI	CCNNNNNNNGG	3 cut(s)	1689, 1718, 1735
BsmAI	GTCTC	3 cut(s)	1272, 2099, 2134
BsmFI	GGGAC	3 cut(s)	240, 943, 1809
BsmI	GAATGC	2 cut(s)	393, 863
BsnI	GGCC	8 cut(s)	27, 396, 444, 533, 626, 1733, 2010, 2076
Bsp1286I	GDGCHC	4 cut(s)	316, 707, 1151, 1955
Bsp1407I	TGTACA	1 cut(s)	1183
Bsp143I	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
Bsp19I	CCATGG	1 cut(s)	627
BspACI	CCGC	4 cut(s)	445, 661, 1120, 1529
BspANI	GGCC	8 cut(s)	27, 396, 444, 533, 626, 1733, 2010, 2076
BspCNI	CTCAG	3 cut(s)	300, 1516, 1978
BspFNI	CGCG	2 cut(s)	226, 1174
BspHI	TCATGA	3 cut(s)	175, 1153, 2058
BspLI	GGNNCC	3 cut(s)	1657, 1694, 1723
BspMAI	CTGCAG	3 cut(s)	383, 645, 1254
BspPI	GGATC	4 cut(s)	614, 1218, 1703, 1755
BspT107I	GGYRCC	1 cut(s)	1692
BsrDI	GCAATG	1 cut(s)	2063
BsrGI	TGTACA	1 cut(s)	1183
BsrI	ACTGG	3 cut(s)	470, 794, 1607
BssECI	CCNNGG	5 cut(s)	627, 963, 1049, 1683, 1734
BssHII	GCGCGC	1 cut(s)	1172
BssMI	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
BssNI	GRCGYC	1 cut(s)	1394
BssT1I	CCWWGG	4 cut(s)	627, 963, 1683, 1734
Bst2UI	CCWGG	5 cut(s)	59, 677, 783, 1051, 1730
Bst4CI	ACNGT	7 cut(s)	90, 451, 552, 1227, 1453, 2005, 2050
Bst6I	CTCTTC	1 cut(s)	523
BstACI	GRCGYC	1 cut(s)	1394
BstAUI	TGTACA	1 cut(s)	1183
BstC8I	GCNNGC	7 cut(s)	96, 361, 923, 1174, 1200, 1204, 1999
BstDEI	CTNAG	5 cut(s)	308, 1487, 1503, 1585, 1986
BstDSI	CCRYGG	1 cut(s)	627
BstF5I	GGATG	4 cut(s)	511, 589, 889, 1918
BstFNI	CGCG	2 cut(s)	226, 1174
BstHHI	GCGC	2 cut(s)	1174, 1176
BstKTI	GATC	9 cut(s)	609, 811, 1092, 1213, 1711, 1750, 1922, 1992, 2125
BstMAI	GTCTC	3 cut(s)	1272, 2099, 2134
BstMBI	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
BstMWI	GCNNNNNNNGC	8 cut(s)	91, 223, 232, 783, 1120, 1169, 1950, 2007
BstNI	CCWGG	5 cut(s)	59, 677, 783, 1051, 1730
BstNSI	RCATGY	3 cut(s)	46, 1936, 2001
BstSCI	CCNGG	6 cut(s)	57, 675, 707, 781, 1049, 1728
BstSFI	CTRYAG	7 cut(s)	277, 379, 641, 1216, 1250, 1779, 1960
BstUI	CGCG	2 cut(s)	226, 1174
BstV1I	GCAGC	7 cut(s)	365, 655, 658, 848, 1104, 1126, 1538
BstV2I	GAAGAC	1 cut(s)	839
BstX2I	RGATCY	2 cut(s)	1919, 1989
BstXI	CCANNNNNNTGG	1 cut(s)	58
BstYI	RGATCY	2 cut(s)	1919, 1989
BsuI	GTATCC	2 cut(s)	471, 1532
BsuRI	GGCC	8 cut(s)	27, 396, 444, 533, 626, 1733, 2010, 2076
BtgI	CCRYGG	1 cut(s)	627
BtsCI	GGATG	4 cut(s)	511, 589, 889, 1918
BtsI	GCAGTG	1 cut(s)	1441
BtsIMutI	CAGTG	5 cut(s)	456, 1441, 1449, 1511, 2001
Cac8I	GCNNGC	7 cut(s)	96, 361, 923, 1174, 1200, 1204, 1999
CaiI	CAGNNNCTG	1 cut(s)	1622
CciI	TCATGA	3 cut(s)	175, 1153, 2058
CfoI	GCGC	2 cut(s)	1174, 1176
Cfr13I	GGNCC	2 cut(s)	61, 1722
CseI	GACGC	1 cut(s)	1402
Csp6I	GTAC	6 cut(s)	454, 984, 1184, 1875, 1979, 2032
CspCI	CAANNNNNGTGG	2 cut(s)	4, 39
CviQI	GTAC	6 cut(s)	454, 984, 1184, 1875, 1979, 2032
DdeI	CTNAG	5 cut(s)	308, 1487, 1503, 1585, 1986
DpnI	GATC	9 cut(s)	608, 810, 1091, 1212, 1710, 1749, 1921, 1991, 2124
DpnII	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
DraI	TTTAAA	1 cut(s)	507
DriI	GACNNNNNGTC	1 cut(s)	1398
EaeI	YGGCCR	4 cut(s)	25, 442, 624, 2008
Eam1104I	CTCTTC	1 cut(s)	523
Eam1105I	GACNNNNNGTC	1 cut(s)	1398
EarI	CTCTTC	1 cut(s)	523
Ecl136II	GAGCTC	1 cut(s)	1149
Eco130I	CCWWGG	4 cut(s)	627, 963, 1683, 1734
Eco24I	GRGCYC	2 cut(s)	316, 1151
Eco47I	GGWCC	2 cut(s)	61, 1722
Eco53kI	GAGCTC	1 cut(s)	1149
Eco57I	CTGAAG	1 cut(s)	1425
EcoICRI	GAGCTC	1 cut(s)	1149
EcoO109I	RGGNCCY	1 cut(s)	1722
EcoRI	GAATTC	2 cut(s)	957, 2117
EcoRII	CCWGG	5 cut(s)	57, 675, 781, 1049, 1728
EcoT14I	CCWWGG	4 cut(s)	627, 963, 1683, 1734
EcoT38I	GRGCYC	2 cut(s)	316, 1151
ErhI	CCWWGG	4 cut(s)	627, 963, 1683, 1734
FalI	AAGNNNNNCTT	2 cut(s)	1470, 1502
FaqI	GGGAC	3 cut(s)	240, 943, 1809
FauI	CCCGC	1 cut(s)	654
FblI	GTMKAC	1 cut(s)	490
Fnu4HI	GCNGC	9 cut(s)	379, 445, 644, 647, 862, 1115, 1118, 1121, 1527
FokI	GGATG	4 cut(s)	498, 596, 896, 1925
FriOI	GRGCYC	2 cut(s)	316, 1151
Fsp4HI	GCNGC	9 cut(s)	379, 445, 644, 647, 862, 1115, 1118, 1121, 1527
FspBI	CTAG	3 cut(s)	1700, 2028, 2039
GlaI	GCGC	2 cut(s)	1173, 1175
GluI	GCNGC	9 cut(s)	379, 445, 644, 647, 862, 1115, 1118, 1121, 1527
HaeIII	GGCC	8 cut(s)	27, 396, 444, 533, 626, 1733, 2010, 2076
HapII	CCGG	2 cut(s)	708, 1889
HgaI	GACGC	1 cut(s)	1402
HhaI	GCGC	2 cut(s)	1174, 1176
Hin1I	GRCGYC	1 cut(s)	1394
Hin6I	GCGC	2 cut(s)	1172, 1174
HinP1I	GCGC	2 cut(s)	1172, 1174
HincII	GTYRAC	1 cut(s)	491
HindII	GTYRAC	1 cut(s)	491
HindIII	AAGCTT	3 cut(s)	233, 566, 1289
HpaII	CCGG	2 cut(s)	708, 1889
HphI	GGTGA	4 cut(s)	154, 176, 1008, 1054
Hpy166II	GTNNAC	5 cut(s)	454, 491, 691, 986, 1045
Hpy188I	TCNGA	5 cut(s)	271, 296, 1000, 1422, 1924
Hpy8I	GTNNAC	5 cut(s)	454, 491, 691, 986, 1045
HpyAV	CCTTC	5 cut(s)	207, 268, 523, 750, 1329
HpyCH4III	ACNGT	7 cut(s)	90, 451, 552, 1227, 1453, 2005, 2050
HpyCH4IV	ACGT	2 cut(s)	456, 816
HpyF10VI	GCNNNNNNNGC	8 cut(s)	91, 223, 232, 783, 1120, 1169, 1950, 2007
HpyF3I	CTNAG	5 cut(s)	308, 1487, 1503, 1585, 1986
HpySE526I	ACGT	2 cut(s)	456, 816
Hsp92I	GRCGYC	1 cut(s)	1394
HspAI	GCGC	2 cut(s)	1172, 1174
Kzo9I	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
LmnI	GCTCC	5 cut(s)	702, 1031, 1195, 1531, 1661
Lsp1109I	GCAGC	7 cut(s)	365, 655, 658, 848, 1104, 1126, 1538
LweI	GCATC	2 cut(s)	1063, 1693
MaeI	CTAG	3 cut(s)	1700, 2028, 2039
MaeII	ACGT	2 cut(s)	456, 816
MaeIII	GTNAC	3 cut(s)	419, 1436, 1828
MalI	GATC	9 cut(s)	608, 810, 1091, 1212, 1710, 1749, 1921, 1991, 2124
MboI	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
MboII	GAAGA	6 cut(s)	188, 510, 513, 574, 844, 1336
MfeI	CAATTG	1 cut(s)	1567
MflI	RGATCY	2 cut(s)	1919, 1989
MhlI	GDGCHC	4 cut(s)	316, 707, 1151, 1955
MlsI	TGGCCA	3 cut(s)	27, 626, 2010
MluCI	AATT	6 cut(s)	684, 957, 1236, 1567, 1611, 2117
MluNI	TGGCCA	3 cut(s)	27, 626, 2010
MlyI	GAGTC	3 cut(s)	423, 925, 1475
MmeI	TCCRAC	1 cut(s)	1725
Mox20I	TGGCCA	3 cut(s)	27, 626, 2010
MroXI	GAANNNNTTC	1 cut(s)	636
MscI	TGGCCA	3 cut(s)	27, 626, 2010
MseI	TTAA	7 cut(s)	147, 231, 459, 506, 555, 1389, 1788
MslI	CAYNNNNRTG	2 cut(s)	140, 1701
Msp20I	TGGCCA	3 cut(s)	27, 626, 2010
MspA1I	CMGCKG	2 cut(s)	1117, 1529
MspI	CCGG	2 cut(s)	708, 1889
MspR9I	CCNGG	6 cut(s)	59, 677, 709, 783, 1051, 1730
MunI	CAATTG	1 cut(s)	1567
Mva1269I	GAATGC	2 cut(s)	393, 863
MvaI	CCWGG	5 cut(s)	59, 677, 783, 1051, 1730
MvnI	CGCG	2 cut(s)	226, 1174
MwoI	GCNNNNNNNGC	8 cut(s)	91, 223, 232, 783, 1120, 1169, 1950, 2007
NciI	CCSGG	1 cut(s)	709
NcoI	CCATGG	1 cut(s)	627
NdeII	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
NlaIV	GGNNCC	3 cut(s)	1657, 1694, 1723
NmuCI	GTSAC	1 cut(s)	1436
NspI	RCATGY	3 cut(s)	46, 1936, 2001
PaeI	GCATGC	1 cut(s)	2001
PagI	TCATGA	3 cut(s)	175, 1153, 2058
PauI	GCGCGC	1 cut(s)	1172
PciI	ACATGT	1 cut(s)	1932
PctI	GAATGC	2 cut(s)	393, 863
PdmI	GAANNNNTTC	1 cut(s)	636
PfeI	GAWTC	8 cut(s)	193, 407, 463, 541, 968, 1260, 1513, 2087
PkrI	GCNGC	9 cut(s)	380, 446, 645, 648, 863, 1116, 1119, 1122, 1528
PleI	GAGTC	3 cut(s)	423, 925, 1475
PpsI	GAGTC	3 cut(s)	423, 925, 1475
PpuMI	RGGWCCY	1 cut(s)	1722
PscI	ACATGT	1 cut(s)	1932
PshBI	ATTAAT	1 cut(s)	147
Psp124BI	GAGCTC	1 cut(s)	1151
Psp1406I	AACGTT	1 cut(s)	816
Psp5II	RGGWCCY	1 cut(s)	1722
Psp6I	CCWGG	5 cut(s)	57, 675, 781, 1049, 1728
PspGI	CCWGG	5 cut(s)	57, 675, 781, 1049, 1728
PspN4I	GGNNCC	3 cut(s)	1657, 1694, 1723
PspPI	GGNCC	2 cut(s)	61, 1722
PspPPI	RGGWCCY	1 cut(s)	1722
PsrI	GAACNNNNNNTAC	2 cut(s)	663, 695
PstI	CTGCAG	3 cut(s)	383, 645, 1254
PstNI	CAGNNNCTG	1 cut(s)	1622
PsuI	RGATCY	2 cut(s)	1919, 1989
PteI	GCGCGC	1 cut(s)	1172
PvuII	CAGCTG	1 cut(s)	1117
RsaI	GTAC	6 cut(s)	455, 985, 1185, 1876, 1980, 2033
RsaNI	GTAC	6 cut(s)	454, 984, 1184, 1875, 1979, 2032
RseI	CAYNNNNRTG	2 cut(s)	140, 1701
SacI	GAGCTC	1 cut(s)	1151
SalI	GTCGAC	1 cut(s)	489
SaqAI	TTAA	7 cut(s)	147, 231, 459, 506, 555, 1389, 1788
SatI	GCNGC	9 cut(s)	379, 445, 644, 647, 862, 1115, 1118, 1121, 1527
Sau3AI	GATC	9 cut(s)	606, 808, 1089, 1210, 1708, 1747, 1919, 1989, 2122
Sau96I	GGNCC	2 cut(s)	61, 1722
SchI	GAGTC	3 cut(s)	423, 925, 1475
ScrFI	CCNGG	6 cut(s)	59, 677, 709, 783, 1051, 1730
SduI	GDGCHC	4 cut(s)	316, 707, 1151, 1955
SfaNI	GCATC	2 cut(s)	1063, 1693
SfcI	CTRYAG	7 cut(s)	277, 379, 641, 1216, 1250, 1779, 1960
SinI	GGWCC	2 cut(s)	61, 1722
SmiMI	CAYNNNNRTG	2 cut(s)	140, 1701
SmlI	CTYRAG	1 cut(s)	2096
SmoI	CTYRAG	1 cut(s)	2096
SphI	GCATGC	1 cut(s)	2001
Sse9I	AATT	6 cut(s)	684, 957, 1236, 1567, 1611, 2117
SsiI	CCGC	4 cut(s)	445, 661, 1120, 1529
SspI	AATATT	2 cut(s)	19, 437
SspMI	CTAG	3 cut(s)	1700, 2028, 2039
SstI	GAGCTC	1 cut(s)	1151
StyD4I	CCNGG	6 cut(s)	57, 675, 707, 781, 1049, 1728
StyI	CCWWGG	4 cut(s)	627, 963, 1683, 1734
TaaI	ACNGT	7 cut(s)	90, 451, 552, 1227, 1453, 2005, 2050
TaiI	ACGT	2 cut(s)	459, 819
TaqI	TCGA	7 cut(s)	432, 490, 1333, 1809, 1949, 2121, 2136
TasI	AATT	6 cut(s)	684, 957, 1236, 1567, 1611, 2117
TatI	WGTACW	2 cut(s)	983, 1183
TauI	GCSGC	2 cut(s)	447, 1123
TfiI	GAWTC	8 cut(s)	193, 407, 463, 541, 968, 1260, 1513, 2087
Tru1I	TTAA	7 cut(s)	147, 231, 459, 506, 555, 1389, 1788
Tru9I	TTAA	7 cut(s)	147, 231, 459, 506, 555, 1389, 1788
TscAI	CASTG	5 cut(s)	456, 1441, 1456, 1511, 2008
TseFI	GTSAC	1 cut(s)	1436
TseI	GCWGC	7 cut(s)	378, 643, 646, 861, 1114, 1117, 1526
Tsp45I	GTSAC	1 cut(s)	1436
TspRI	CASTG	5 cut(s)	456, 1441, 1456, 1511, 2008
VpaK11BI	GGWCC	2 cut(s)	61, 1722
VspI	ATTAAT	1 cut(s)	147
XapI	RAATTY	2 cut(s)	957, 2117
XbaI	TCTAGA	1 cut(s)	1699
XceI	RCATGY	3 cut(s)	46, 1936, 2001
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1741
XmiI	GTMKAC	1 cut(s)	490
XmnI	GAANNNNTTC	1 cut(s)	636
XspI	CTAG	3 cut(s)	1700, 2028, 2039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.