RchiOBHm_Chr4g0444141

alpha,alpha-trehalose-phosphate synthase UDP-forming

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
64989805 .. 64994752
4948 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41184

Sequence Viewer

Length: 2601 bp
ATGGCTTCAAGATCTTGTGCAAACCTTTTAGAATTGGCATCTGGAGTTTTGGATATTCCTTGTACTCCAAGTCCAAGGACCCTTCCTCGGGTGATGACTGTTCCTGGTATTATCTCTGATGTCGATAGTTACAGCAATGATGATGGGGATTCAGATGGCACTTCATCTGTTTGCCGTGAGCGGAAAATTGTAGTTGCGAATATGTTACCGTTACATGCTAAAAGGGATCCAGAAACAAACAAATGGTGCTTCAGTTTGGATGAGGATTCAATTTTGATACATTTAAAGGACGGGTTTTCATCTGAAACTGAGGTTGTTTATGTGGGGTCTCTCAAGGCTGAAATAGATGCTAGTGAACAAGATGAGGTTGCACAGAAACTGCTGGAGGAATTCAATTGTGTGCCAACATTTCTGCCCAGTGATCTCCAGAAAAAGTTCTATTTGGGTTTCTGTAAACGGCAACTATGGCCTCTTTTCCATTATATGTTGCCCATGTGCCCAGACCATGGTGACCGCTTTGACCGCTCATTGTGGCAGGCCTACGTATCTGCAAATAAAATATATGCAGACAAGGTGATGGAAGTTATTAATCCTGAGGATGATTGTGTCTGGGTTCACGATTATCATTTGATGGTTCTCCCAACATTTCTGAGGAAGCGATACTATCGGGTAAAGCTTGGGTTTTTTCTTCACAGCCCATTTCCATCATCAGAAATTTATCGAACTTTGACCGTTCGAGATGAAATCTTGAGAGGTTTACTGAACTGTGACCTAATTGGTTTTCATACATTTGATTATGCACGTCACTTCCTCTCCTGCTGCAGCAGAATGCTGGGCCTTGACTATGAATCTAAGCGAGGACACATTGGGCTTGATTATTTTGGCCGCACAGTTTACATTAAAATTCTGCCTGTAGGAGTTCATATGGGTCGGCTTGAATCTGCATTGAATCTTCCCTCCACAACCACCAAAGTCAAAGAAATTCAAGAACAGTATAAGGGGAAAAAAGTGATCCTTGGCATTGATGACATGGACATATTTAAAGGCATCAGTCTAAAACTTCTAGCTGTAGAACAACTCTTACAGCAGAATCCAGAGTTGCAGGGCAAAATAGTCCTGGTCCAAATTGTGAATCCTGCTAGGGGCTTTGGGAAAGATGTACAGGAAGCAAAGAACGAGACATACTTAACTGCCAGAAGGATCAATGAGGTTTATGGTTCTCCTAATTATGAGCCAGTGATTCTGATTGATTGTCCTGTTTCTCATCAAGAGAAATCAGCCTATTATGCTGTGGCCGAATGCTGTATAGTGAATGCCGTAAGGGATGGAATGAACTTAGTTCCTTACAAATATATTGTTTGCAGGCAGGGAACTCCAGATATGAATGAAGCTCTAGGCTTAACAGAAGATTCTCCTCGGACGAGCATGCTTGTTGTGTCTGAATTTATTGGTTGCTCACCTTCTTTAAGTGGAGCAATCAGGGTTAACCCTTGGGATATTGATGCTGTGGCTGATGCTTTGAACTTGGCTATCACCATGTCGAACTCTGAGAAGCAGTTACGTCATGAGAAACACTATCGTTATGTCAGTTCTCATGATGTGGCATATTGGGCACGAAGCTTTTCACAGGATTTGGATAGAGCATGTCAAGATCATTATAGTAAAAGGTGCTGGGGAATTGGTTTGGGCTTGAGGTTCAGAGTTGTTTCCCTTTCTCCGAATTTTAGGAAGCTGTCTGTAGACCATATTGTCTCGGCTTATAAAAGAACAACTAGAAGGGCAATATTCTTGGACTATGATGGAACTGTCATTCCCCAAACTTCAATTATCAAGTCCCCAAGCCCGGAAGTCCTTTCTATGATGAATTCCCTGTGCAAAGATCCAAAGAACACTGTTTTTATTGTTAGTGGGAGGAGTAGGACTTCTCTGGGCGATTGGTTTGCCTCATGTGAGAAGCTGGGGATTGCTGCTGAGCATGGCTACTTCTTAAGGTGGGGTAGTACTTCCAAGTGGGAAACCAGTCTAGTCTCTGCCGACCTTGATTGGAAAGAGATTGTGGAGCCTGTGATGAGATTATATACGGAGGCAACAGATGGCTCCAACATAGAAAGTAAAGAGAGTGCTTTGGTATGGCATCATCAAGATGCAGACCCTGACTTTGGATCCTGTCAGGCCAAGGAGTTGCTGGATCATCTGGAAAATGTGCTTGCTAACGAACCAGCTGTAGTCAAGAGAGGCCAGCATATCGTTGAGGTTAAGCCGCAGGGAGTAAGCAAAGGATTGGTTGCTGAGAAGGTTCTTTTGAGAATGGTCAATGATGGGAAGCCACCAGATTTTGTGATGTGCATTGGGGACGACAGATCTGATGAAGACATGTTTGAAAGCATATTAAGCACAGTTGCTAGTCCTTTATTGCCTTCGCCTCCTGAGATATTTGCTTGCACAGTTGGAAGAAAGCCAAGTAAGGCCAAGTACTATCTCGATGATGCAATTGATGTTGTGAAGTTACTTCAAGGCCTTGCTACTGCTTCAAACCCCAAGCCCAGGAATCTACCCCATATCCAGGTTTCTTTCGAGAGCGCCTTTGATTCAGTTATGTGA

Protein Analysis

866

Amino Acids

97.48

Weight (kDa)

5.85

Isoelectric Point (pI)

50.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_20 PF00982 61 - 546 5.7e-189 Glycosyltransferase family 20
Trehalose_PPase PF02358 596 - 829 1.2e-82 Trehalose-phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1761
AasI GACNNNNNNGTC 1 cut(s) 1748
AccB7I CCANNNNNTGG 1 cut(s) 506
AccBSI CCGCTC 2 cut(s) 181, 525
AccI GTMKAC 1 cut(s) 1740
AciI CCGC 5 cut(s) 181, 514, 523, 886, 2261
AclWI GGATC 8 cut(s) 221, 234, 1006, 1208, 1874, 2157, 2170, 2196
AcoI YGGCCR 2 cut(s) 883, 1293
AcsI RAATTY 7 cut(s) 389, 714, 903, 981, 1442, 1720, 1864
AcuI CTGAAG 1 cut(s) 235
AfaI GTAC 4 cut(s) 64, 1161, 2002, 2474
AfiI CCNNNNNNNGG 8 cut(s) 87, 88, 506, 1142, 1843, 2159, 2544, 2563
AflII CTTAAG 1 cut(s) 1987
AflIII ACRYGT 1 cut(s) 2373
AjiI CACGTC 1 cut(s) 803
AjnI CCWGG 4 cut(s) 103, 1116, 2543, 2562
AloI GAACNNNNNNTCC 2 cut(s) 1795, 1827
AluBI AGCT 7 cut(s) 676, 1067, 1391, 1620, 1732, 1957, 2222
AluI AGCT 7 cut(s) 676, 1067, 1391, 1620, 1732, 1957, 2222
Alw26I GTCTC 4 cut(s) 333, 1172, 1756, 2032
AlwI GGATC 8 cut(s) 221, 234, 1006, 1208, 1874, 2157, 2170, 2196
AlwNI CAGNNNCTG 2 cut(s) 379, 2153
Ama87I CYCGRG 1 cut(s) 87
AoxI GGCC 9 cut(s) 467, 537, 835, 883, 1293, 2172, 2236, 2466, 2515
ApeKI GCWGC 3 cut(s) 819, 822, 1967
ApoI RAATTY 7 cut(s) 389, 714, 903, 981, 1442, 1720, 1864
ArsI GACNNNNNNTTYG 2 cut(s) 2141, 2173
AseI ATTAAT 1 cut(s) 588
Asp700I GAANNNNTTC 2 cut(s) 434, 1621
AspLEI GCGC 1 cut(s) 2582
AspS9I GGNCC 3 cut(s) 78, 835, 1120
AsuC2I CCSGG 1 cut(s) 1844
AsuHPI GGTGA 5 cut(s) 103, 521, 586, 1449, 1525
AvaI CYCGRG 1 cut(s) 87
AvaII GGWCC 2 cut(s) 78, 1120
AxyI CCTNAGG 1 cut(s) 594
BaeGI GKGCMC 2 cut(s) 500, 1615
BamHI GGATCC 2 cut(s) 226, 2162
BbsI GAAGAC 1 cut(s) 2376
BbvI GCAGC 3 cut(s) 806, 834, 1954
BccI CCATC 9 cut(s) 137, 149, 571, 625, 712, 1319, 1793, 2087, 2312
BceAI ACGGC 3 cut(s) 159, 473, 1301
BcgI CGANNNNNNTGC 2 cut(s) 1922, 1956
BciT130I CCWGG 4 cut(s) 105, 1118, 2545, 2564
BcnI CCSGG 1 cut(s) 1844
BcoDI GTCTC 4 cut(s) 333, 1172, 1756, 2032
BfaI CTAG 7 cut(s) 351, 1064, 1140, 1394, 1773, 2024, 2403
BfmI CTRYAG 5 cut(s) 820, 912, 1068, 1737, 2223
BfoI RGCGCY 1 cut(s) 2583
BfrI CTTAAG 1 cut(s) 1987
BglII AGATCT 2 cut(s) 11, 2360
BisI GCNGC 5 cut(s) 820, 823, 886, 1968, 2261
BlpI GCTNAGC 1 cut(s) 1971
BlsI GCNGC 5 cut(s) 821, 824, 887, 1969, 2262
BmcAI AGTACT 2 cut(s) 2002, 2474
Bme1390I CCNGG 5 cut(s) 105, 1118, 1844, 2545, 2564
Bme18I GGWCC 2 cut(s) 78, 1120
BmeT110I CYCGRG 1 cut(s) 87
BmgBI CACGTC 1 cut(s) 803
BmgT120I GGNCC 3 cut(s) 78, 835, 1120
BmiI GGNNCC 5 cut(s) 80, 228, 2061, 2098, 2164
BmrFI CCNGG 5 cut(s) 105, 1118, 1844, 2545, 2564
BmrI ACTGGG 1 cut(s) 411
BmsI GCATC 8 cut(s) 47, 337, 1056, 1492, 1504, 2134, 2143, 2476
BmuI ACTGGG 1 cut(s) 411
BpiI GAAGAC 1 cut(s) 2376
BpmI CTGGAG 4 cut(s) 63, 404, 410, 1359
Bpu1102I GCTNAGC 1 cut(s) 1971
BpuEI CTTGAG 3 cut(s) 317, 769, 1711
BpuMI CCSGG 1 cut(s) 1844
BsaAI YACGTR 1 cut(s) 544
BsaI GGTCTC 1 cut(s) 333
BsaJI CCNNGG 8 cut(s) 74, 86, 505, 1015, 1415, 1490, 2175, 2543
BsaXI ACNNNNNCTCC 2 cut(s) 797, 827
Bsc4I CCNNNNNNNGG 8 cut(s) 87, 88, 506, 1142, 1843, 2159, 2544, 2563
Bse1I ACTGG 3 cut(s) 417, 1235, 2019
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 142
BseBI CCWGG 4 cut(s) 105, 1118, 2545, 2564
BseDI CCNNGG 8 cut(s) 74, 86, 505, 1015, 1415, 1490, 2175, 2543
BseGI GGATG 3 cut(s) 265, 604, 1330
BseLI CCNNNNNNNGG 8 cut(s) 87, 88, 506, 1142, 1843, 2159, 2544, 2563
BseMI GCAATG 1 cut(s) 142
BseMII CTCAG 7 cut(s) 300, 585, 641, 1539, 1962, 2280, 2418
BseNI ACTGG 3 cut(s) 417, 1235, 2019
BseRI GAGGAG 2 cut(s) 1404, 1927
BseSI GKGCMC 2 cut(s) 500, 1615
BseXI GCAGC 3 cut(s) 806, 834, 1954
BseYI CCCAGC 3 cut(s) 832, 1671, 1957
BshFI GGCC 9 cut(s) 469, 539, 837, 885, 1295, 2174, 2238, 2468, 2517
BsiHKCI CYCGRG 1 cut(s) 87
BsiSI CCGG 1 cut(s) 1844
BslFI GGGAC 2 cut(s) 1819, 2366
BslI CCNNNNNNNGG 8 cut(s) 87, 88, 506, 1142, 1843, 2159, 2544, 2563
BsmAI GTCTC 4 cut(s) 333, 1172, 1756, 2032
BsmFI GGGAC 2 cut(s) 1819, 2366
BsmI GAATGC 3 cut(s) 834, 1304, 1318
BsnI GGCC 9 cut(s) 469, 539, 837, 885, 1295, 2174, 2238, 2468, 2517
Bso31I GGTCTC 1 cut(s) 333
BsoBI CYCGRG 1 cut(s) 87
Bsp1286I GDGCHC 2 cut(s) 500, 1615
Bsp1407I TGTACA 1 cut(s) 1159
Bsp1720I GCTNAGC 1 cut(s) 1971
Bsp19I CCATGG 1 cut(s) 505
BspACI CCGC 5 cut(s) 181, 514, 523, 886, 2261
BspANI GGCC 9 cut(s) 469, 539, 837, 885, 1295, 2174, 2238, 2468, 2517
BspCNI CTCAG 7 cut(s) 301, 586, 642, 1540, 1963, 2281, 2419
BspHI TCATGA 2 cut(s) 1564, 1594
BspLI GGNNCC 5 cut(s) 80, 228, 2061, 2098, 2164
BspMAI CTGCAG 1 cut(s) 824
BspPI GGATC 8 cut(s) 221, 234, 1006, 1208, 1874, 2157, 2170, 2196
BspTI CTTAAG 1 cut(s) 1987
BspTNI GGTCTC 1 cut(s) 333
BsrBI CCGCTC 2 cut(s) 181, 525
BsrDI GCAATG 1 cut(s) 142
BsrGI TGTACA 1 cut(s) 1159
BsrI ACTGG 3 cut(s) 417, 1235, 2019
BssECI CCNNGG 8 cut(s) 74, 86, 505, 1015, 1415, 1490, 2175, 2543
BssT1I CCWWGG 5 cut(s) 74, 505, 1015, 1490, 2175
Bst2UI CCWGG 4 cut(s) 105, 1118, 2545, 2564
BstAFI CTTAAG 1 cut(s) 1987
BstAUI TGTACA 1 cut(s) 1159
BstBAI YACGTR 1 cut(s) 544
BstC8I GCNNGC 6 cut(s) 537, 1364, 1427, 2208, 2240, 2440
BstDEI CTNAG 9 cut(s) 309, 594, 650, 852, 1336, 1548, 1971, 2289, 2427
BstDSI CCRYGG 1 cut(s) 505
BstEII GGTNACC 1 cut(s) 509
BstF5I GGATG 3 cut(s) 265, 604, 1330
BstH2I RGCGCY 1 cut(s) 2583
BstHHI GCGC 1 cut(s) 2582
BstMAI GTCTC 4 cut(s) 333, 1172, 1756, 2032
BstMWI GCNNNNNNNGC 5 cut(s) 466, 522, 1286, 1610, 2391
BstNI CCWGG 4 cut(s) 105, 1118, 2545, 2564
BstNSI RCATGY 4 cut(s) 218, 1429, 1647, 2377
BstPI GGTNACC 1 cut(s) 509
BstSCI CCNGG 5 cut(s) 103, 1116, 1842, 2543, 2562
BstSFI CTRYAG 5 cut(s) 820, 912, 1068, 1737, 2223
BstSLI GKGCMC 2 cut(s) 500, 1615
BstSNI TACGTA 1 cut(s) 544
BstV1I GCAGC 3 cut(s) 806, 834, 1954
BstV2I GAAGAC 1 cut(s) 2376
BstX2I RGATCY 5 cut(s) 11, 226, 1879, 2162, 2360
BstYI RGATCY 5 cut(s) 11, 226, 1879, 2162, 2360
Bsu36I CCTNAGG 1 cut(s) 594
BsuRI GGCC 9 cut(s) 469, 539, 837, 885, 1295, 2174, 2238, 2468, 2517
BtgI CCRYGG 1 cut(s) 505
BtrI CACGTC 1 cut(s) 803
BtsCI GGATG 3 cut(s) 265, 604, 1330
BtsIMutI CAGTG 3 cut(s) 424, 1242, 1890
Cac8I GCNNGC 6 cut(s) 537, 1364, 1427, 2208, 2240, 2440
CaiI CAGNNNCTG 2 cut(s) 379, 2153
CciI TCATGA 2 cut(s) 1564, 1594
CfoI GCGC 1 cut(s) 2582
Cfr13I GGNCC 3 cut(s) 78, 835, 1120
Csp6I GTAC 4 cut(s) 63, 1160, 2001, 2473
CviQI GTAC 4 cut(s) 63, 1160, 2001, 2473
DdeI CTNAG 9 cut(s) 309, 594, 650, 852, 1336, 1548, 1971, 2289, 2427
DraI TTTAAA 2 cut(s) 285, 1042
DrdI GACNNNNNNGTC 1 cut(s) 1748
DseDI GACNNNNNNGTC 1 cut(s) 1748
EaeI YGGCCR 2 cut(s) 883, 1293
Eco105I TACGTA 1 cut(s) 544
Eco130I CCWWGG 5 cut(s) 74, 505, 1015, 1490, 2175
Eco147I AGGCCT 2 cut(s) 539, 2517
Eco31I GGTCTC 1 cut(s) 333
Eco47I GGWCC 2 cut(s) 78, 1120
Eco57I CTGAAG 1 cut(s) 235
Eco81I CCTNAGG 1 cut(s) 594
Eco88I CYCGRG 1 cut(s) 87
Eco91I GGTNACC 1 cut(s) 509
EcoO109I RGGNCCY 1 cut(s) 78
EcoO65I GGTNACC 1 cut(s) 509
EcoRI GAATTC 2 cut(s) 389, 1864
EcoRII CCWGG 4 cut(s) 103, 1116, 2543, 2562
EcoT14I CCWWGG 5 cut(s) 74, 505, 1015, 1490, 2175
ErhI CCWWGG 5 cut(s) 74, 505, 1015, 1490, 2175
FalI AAGNNNNNCTT 2 cut(s) 999, 1031
FaqI GGGAC 2 cut(s) 1819, 2366
FauNDI CATATG 1 cut(s) 924
FblI GTMKAC 1 cut(s) 1740
Fnu4HI GCNGC 5 cut(s) 820, 823, 886, 1968, 2261
FokI GGATG 3 cut(s) 272, 611, 1337
Fsp4HI GCNGC 5 cut(s) 820, 823, 886, 1968, 2261
FspBI CTAG 7 cut(s) 351, 1064, 1140, 1394, 1773, 2024, 2403
GlaI GCGC 1 cut(s) 2581
GluI GCNGC 5 cut(s) 820, 823, 886, 1968, 2261
GsaI CCCAGC 3 cut(s) 836, 1675, 1961
GsuI CTGGAG 4 cut(s) 63, 404, 410, 1359
HaeII RGCGCY 1 cut(s) 2583
HaeIII GGCC 9 cut(s) 469, 539, 837, 885, 1295, 2174, 2238, 2468, 2517
HapII CCGG 1 cut(s) 1844
HhaI GCGC 1 cut(s) 2582
Hin6I GCGC 1 cut(s) 2580
HinP1I GCGC 1 cut(s) 2580
HincII GTYRAC 1 cut(s) 1486
HindII GTYRAC 1 cut(s) 1486
HindIII AAGCTT 2 cut(s) 674, 1618
HpaI GTTAAC 1 cut(s) 1486
HpaII CCGG 1 cut(s) 1844
HphI GGTGA 5 cut(s) 103, 521, 586, 1449, 1525
Hpy166II GTNNAC 7 cut(s) 356, 455, 616, 758, 895, 1486, 1741
Hpy8I GTNNAC 7 cut(s) 356, 455, 616, 758, 895, 1486, 1741
HpyAV CCTTC 6 cut(s) 92, 1191, 1470, 1770, 2287, 2427
HpyCH4IV ACGT 3 cut(s) 543, 802, 1561
HpyF10VI GCNNNNNNNGC 5 cut(s) 466, 522, 1286, 1610, 2391
HpyF3I CTNAG 9 cut(s) 309, 594, 650, 852, 1336, 1548, 1971, 2289, 2427
HpySE526I ACGT 3 cut(s) 543, 802, 1561
HspAI GCGC 1 cut(s) 2580
KspAI GTTAAC 1 cut(s) 1486
LmnI GCTCC 3 cut(s) 1472, 2059, 2102
Lsp1109I GCAGC 3 cut(s) 806, 834, 1954
LweI GCATC 8 cut(s) 47, 337, 1056, 1492, 1504, 2134, 2143, 2476
MaeI CTAG 7 cut(s) 351, 1064, 1140, 1394, 1773, 2024, 2403
MaeII ACGT 3 cut(s) 543, 802, 1561
MaeIII GTNAC 8 cut(s) 128, 204, 210, 509, 767, 803, 1557, 2505
MbiI CCGCTC 2 cut(s) 181, 525
MboII GAAGA 5 cut(s) 680, 944, 1418, 2381, 2463
MfeI CAATTG 2 cut(s) 394, 2490
MflI RGATCY 5 cut(s) 11, 226, 1879, 2162, 2360
MhlI GDGCHC 2 cut(s) 500, 1615
MmeI TCCRAC 2 cut(s) 2124, 2428
MroXI GAANNNNTTC 2 cut(s) 434, 1621
MslI CAYNNNNRTG 1 cut(s) 2142
MspA1I CMGCKG 1 cut(s) 2222
MspCI CTTAAG 1 cut(s) 1987
MspI CCGG 1 cut(s) 1844
MspR9I CCNGG 5 cut(s) 105, 1118, 1844, 2545, 2564
MunI CAATTG 2 cut(s) 394, 2490
Mva1269I GAATGC 3 cut(s) 834, 1304, 1318
MvaI CCWGG 4 cut(s) 105, 1118, 2545, 2564
MwoI GCNNNNNNNGC 5 cut(s) 466, 522, 1286, 1610, 2391
NciI CCSGG 1 cut(s) 1844
NcoI CCATGG 1 cut(s) 505
NdeI CATATG 1 cut(s) 924
NlaIV GGNNCC 5 cut(s) 80, 228, 2061, 2098, 2164
NmeAIII GCCGAG 1 cut(s) 1733
NmuCI GTSAC 3 cut(s) 509, 767, 803
NspI RCATGY 4 cut(s) 218, 1429, 1647, 2377
PaeI GCATGC 1 cut(s) 1429
PagI TCATGA 2 cut(s) 1564, 1594
PceI AGGCCT 2 cut(s) 539, 2517
PciI ACATGT 1 cut(s) 2373
PctI GAATGC 3 cut(s) 834, 1304, 1318
PdmI GAANNNNTTC 2 cut(s) 434, 1621
PflMI CCANNNNNTGG 1 cut(s) 506
PkrI GCNGC 5 cut(s) 821, 824, 887, 1969, 2262
Ppu21I YACGTR 1 cut(s) 544
PpuMI RGGWCCY 1 cut(s) 78
PscI ACATGT 1 cut(s) 2373
PshBI ATTAAT 1 cut(s) 588
PsiI TTATAA 1 cut(s) 1761
Psp5II RGGWCCY 1 cut(s) 78
Psp6I CCWGG 4 cut(s) 103, 1116, 2543, 2562
PspEI GGTNACC 1 cut(s) 509
PspFI CCCAGC 3 cut(s) 832, 1671, 1957
PspGI CCWGG 4 cut(s) 103, 1116, 2543, 2562
PspN4I GGNNCC 5 cut(s) 80, 228, 2061, 2098, 2164
PspPI GGNCC 3 cut(s) 78, 835, 1120
PspPPI RGGWCCY 1 cut(s) 78
PsrI GAACNNNNNNTAC 4 cut(s) 1065, 1097, 1166, 1198
PstI CTGCAG 1 cut(s) 824
PstNI CAGNNNCTG 2 cut(s) 379, 2153
PsuI RGATCY 5 cut(s) 11, 226, 1879, 2162, 2360
PvuII CAGCTG 1 cut(s) 2222
RsaI GTAC 4 cut(s) 64, 1161, 2002, 2474
RsaNI GTAC 4 cut(s) 63, 1160, 2001, 2473
RseI CAYNNNNRTG 1 cut(s) 2142
SatI GCNGC 5 cut(s) 820, 823, 886, 1968, 2261
Sau96I GGNCC 3 cut(s) 78, 835, 1120
ScaI AGTACT 2 cut(s) 2002, 2474
ScrFI CCNGG 5 cut(s) 105, 1118, 1844, 2545, 2564
SduI GDGCHC 2 cut(s) 500, 1615
SfaNI GCATC 8 cut(s) 47, 337, 1056, 1492, 1504, 2134, 2143, 2476
SfcI CTRYAG 5 cut(s) 820, 912, 1068, 1737, 2223
SinI GGWCC 2 cut(s) 78, 1120
SmiMI CAYNNNNRTG 1 cut(s) 2142
SmlI CTYRAG 4 cut(s) 332, 748, 1690, 1987
SmoI CTYRAG 4 cut(s) 332, 748, 1690, 1987
SnaBI TACGTA 1 cut(s) 544
SphI GCATGC 1 cut(s) 1429
SseBI AGGCCT 2 cut(s) 539, 2517
SsiI CCGC 5 cut(s) 181, 514, 523, 886, 2261
SspI AATATT 1 cut(s) 1785
SspMI CTAG 7 cut(s) 351, 1064, 1140, 1394, 1773, 2024, 2403
StuI AGGCCT 2 cut(s) 539, 2517
StyD4I CCNGG 5 cut(s) 103, 1116, 1842, 2543, 2562
StyI CCWWGG 5 cut(s) 74, 505, 1015, 1490, 2175
TaiI ACGT 3 cut(s) 546, 805, 1564
TaqI TCGA 6 cut(s) 123, 721, 736, 1541, 2481, 2574
TatI WGTACW 4 cut(s) 62, 1159, 2000, 2472
TauI GCSGC 2 cut(s) 888, 2263
TscAI CASTG 3 cut(s) 424, 1242, 1897
TseFI GTSAC 3 cut(s) 509, 767, 803
TseI GCWGC 3 cut(s) 819, 822, 1967
Tsp45I GTSAC 3 cut(s) 509, 767, 803
TspGWI ACGGA 1 cut(s) 2096
TspRI CASTG 3 cut(s) 424, 1242, 1897
Van91I CCANNNNNTGG 1 cut(s) 506
Vha464I CTTAAG 1 cut(s) 1987
VpaK11BI GGWCC 2 cut(s) 78, 1120
VspI ATTAAT 1 cut(s) 588
XapI RAATTY 7 cut(s) 389, 714, 903, 981, 1442, 1720, 1864
XceI RCATGY 4 cut(s) 218, 1429, 1647, 2377
XcmI CCANNNNNNNNNTGG 1 cut(s) 2182
XmiI GTMKAC 1 cut(s) 1740
XmnI GAANNNNTTC 2 cut(s) 434, 1621
XspI CTAG 7 cut(s) 351, 1064, 1140, 1394, 1773, 2024, 2403
ZrmI AGTACT 2 cut(s) 2002, 2474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.