RLG00000005852

alpha,alpha-trehalose-phosphate synthase UDP-forming

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
2348201 .. 2356057
7857 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005852

Sequence Viewer

Length: 4128 bp
ATGGCTTCAAGATCTTGTGCAAACCTTTTAGAATTGGCATCTGGAGTTTTGGATATTCCTTGTACTCCAAGTCCAAGGACCCTTCCTCGGGTGATGACTGTTCCTGGAATTATCTCAGATGTGGATTGTTACAGCAATGATGAGGGGGATTCAGAAGGCACTTCATCTGTTTGCCGTGAGCGGAAAATTGTAGTTGCGAATATGTTACCGTTACATGCTAAAAGGGATCCAGAAACAAACAAATGGTGCTTCAGTTTGGATGAGGATTCAATTTTGATACATTTAAAGGACGGGTTTTCATCTGAAACTGAGGTTGTTTATGTGGGGTCTCTGAAGGCTGAAATAGATGCTAGTGAACAAGATGAGGTTGCACAGAAACTGCTGGAGGAATTCAATTGTGTGCCAACATTTCTGCCCAGTGATCTCCAGAAAAAGTTCTATTTGGGTTTCTGTAAACGGCAACTATGGCCCCTTTTCCATTATATGTTGCCCATGTGCCCGGACCATGGTGACCGCTTTGACCGCTCATTGTGGCAGGCCTACGTATCTGCAAACAAAATATATGCAGACAAGGTGATGGAAGTTATTAATCCTGAGGATGATTGTGTCTGGGTTCACGATTATCATTTGATGGTTCTCCCAACATTTTTGAGGAAGCGGTACTATCGGGTAAAGCTTGGGTTTTTTCTTCACAGCCCATTCCCATCATCAGAAATTTATCGAACTTTGACTGTTCGAGATGAAATCTTGAGAGGTTTACTGAATTGTGACCTAATTGGTTTTCATACATTTGATTATGCACGTCACTTCCTCTCCTGCTGCAGCAGAATGCTGGGCCTTGACTATGAATCTAAGCGAGGACACATTGGGCTTGATTATTTTGGCCGCACAGTTTACATTAAAATTCTGCCTGTAGGAGTTCATATGGGTCGGCTTGAATCTGCATTGAATCTTCCCTCCACAACCGCCAAAGTCAAAGAGATTCAAGAACAGTGTAAGGGGAAAAAAGTGATCCTTGGCATTGATGACATGGACATATTTAAAGGCATCAGTCTAAAACTTCTAGCTGTAGAACAACTCTTACAGCAGAATCCAGAGTTGCAGGGCAAAATAGTCCTGGTCCAAATTGTGAATCCTGCGAGGGGCTTTGGGAAAGATGTACAGGAAGCAAAGAACGAGACATACTTAACAGCCAAAAGGATCAATGAGGTTTATGGTTCTCGTAATTATCAGCCAGTGATTCTGATTGATCGTCCTGTTTCTCATCAAGAGAAATCAGCCTATTATGCTGTGGCCGAATGCTGTATAGTGAACGCCGTAAGGGATGGAATGAACTTAGTTCCTTACAAATATATTGTTTGCAGGCAGGGAACTTCAGATATGAATGAAGCTTTAGGCATAACAGAAGATTCTCCTCGGACGAGCATGCTCGTTGTGTCTGAATTTATTGGTTGCTCACCTTCTTTAAGTGGAGCAATCAGGGTTAACCCTTGGGATATTGATGCTGTGGCTGATGCTTTGAACTTGGCTATCACCATGTCCAACTCCGAGAAGCAGTTACGTCATGAGAAACACTATCGTTATGTCAGTTCTCATGATGTGGCATATTGGGCACGAAGCTTTTCACAGGATTTGGATAGAGCATGTCAAGATCATTATAGTAAAAGGTGCTGGGGAATTGGTTTGGGCTTGAGGTTCAGAGTTGTTTCCCTTTCTCCGAATTTTAGGAAGCTGTCTGTAGACCATATTGTCTCGGCTTATAAAAGAACAACTAGAAGGGCAATATTCTTGGACTATGATGGAACTGTCATTCCCCAAACTTCAATTATCAAGTCCCCAAGCTCGGAAGTCCTTTCTATGATGAATTCCCTGTGCAAAGATCCAAAGAACACTGTTTTTATTGTTAGTGGGAGGAGTAGGACTTCTCTGGGCGATTGGTTTGCCTCATGTGAGAAGCTGGGGATTGCTGCTGAGCATGGCTACTTCTTAAGGTGGGATAGTACATCCAAGTGGGAAACCAGTCTAGTCTCTGCCGACCTTGATTGGAAAGAGATTGTGGAGCCTGTGATGAGATTATATACGGAGGCAACAGATGGCTCTAACATAGAAAGTAAAGAGAGTGCTTTGGTATGGCATCATCAAGATGCAGATCCTGACTTTGGATCCTGTCAGGCCAAGGAGTTGCTGGATCATCTGGAAAATGTGCTTGCTAACGAACCAGCTCTAGTCAAGAGAGGCCAGCATATCGTTGAGGTTAAACCGCAGGGAGTAAGCAAAGGATTGGTTGCTGAGAAGTTACTTCAAGGCCTTGCTACTGCTTCAAACCCCAAGCCTAGGAATCTACCCCATATCCAGCCTCTGAATGGTTCTCTCAGCAAAAAGGCAATTTTCGGGTATTGGTGGGAGCATGGAGCACCCTTGACCATTCTTGATTTGTACATGGTGACATCAATATGTATTTATCGGTACCTCCTGAGTTTCAGTCCATTCATGGTGGTGACCAGAAGTGCTGGAAATTCCAGCGGTTTTTCAGAGTCTTGTTTTATTGAGTGGGAAGATGTAGAGTACCACCGAGTCCCCACAGAGTCACTCACTCACTCACTCAGTGACCTCCCTCCTCCGCTCGTCCACCTTTTCATCCTTTGTCTCCTTCTTCCTTTTCACACTCCCTCACTCTCTCCACATTCAAAAGCTCACTTTGAGAGAGTGAGAGCATCTTTCTCATACACACCCATTAGGGTTTTCTATAATGCTGCCACCTTGAATCCCTTCTTCTCCAGCTGGTTTGGGGTAATGGGTCGGACAGTTTTGGTTCTGGGTCTTGTTCTTCTTTTGGTTCTGATCGGAGCGGTTTCGGGCCGTCCGATGGTGAAGTTTGAGAGTGGGTTTACGGTGGAGACAGTGTTTGATGGGAGCAAGCTTGGTATTGAGCCTCACACTGTTGAGGTTTTGCCAAATGGGGAGCTTTTGATTTTGGACTCCGCTAATAGTAACATTTATAGAATGTCTTCGTCTCTATCAATATATAGCAGACCAAAGCTGGTTGCAGGGTCCCCTGAAGGCAATATTGGACATATAGATGGAAAGCCCAGAGAGGCAAGAATGAACCACCCAAAGGGGCTTACAGTTGATGACAGGGGAAACATTTATATTGCAGACACAAGAAATATGGCAATCAGGAAGATTAGTGATGCTGGGGTCACAACAATTGCAGGAGGGAAATTGGGCCGTGGGGGAAGCCATGTGGATGGACCAAGTGAAGATGCAAAATTTTCCAACGACTTTGATGTGGTTTACATTGGAAGCAGCTGCTCCTTACTTGTCATAGACAGAGGAAATCAAGCTATCAGGGAGATCCAACTCCATTTTGATGATTGTGCTTACCAATATGGAAGTGGTTTCCCGCTTGGGATTGCGATGCTTCTGGGGGCAGGCTTTTTTGGTTACATGTTAGCCTTACTGCAACGTAGAGTGGGTACAATTGTCTCTTCCCAAAATGATGAAGACCTAACCAAGCCAAGAATGCCGTCAAGTCCATACAAAAAGCCTCTGAAATCAGTCATGCCACCACTGATTCCAACTGAAGATGAGCAGGAGAAGCAAGAAGAAGGCTTCTTTGGATCACTTGGAAAGCTTTTAGTCAATGCCTGGGCATCTGTTTTGGAAATTCTAGGGAAAAAGCATTCAAACTATCAAGACCAAAGCCAGCAGCACAAGCATTCAAATACTTGGCCTGTGCAAGATAGTTATGTGATAGCAGATGAGGATGAGCCGCCTACAATTGAGACCCGAACCCCTACCCCACGCAAAACCTATGCGTTTATGGCCAAGGATGCTGAAACAATGCAACAGTTGCGACAAAGCCGAGTTTTCTACAATGGGTGGGGTGATCATCAACAGCAGCCAAAACAGCAGCAGCATTATCATCGTCACCAGTCATCCACTCCACAAACTTTCTATGAGCACAGCTGTGATCAAACCACTGAGATTGTGTTTGGGGCAGTCCAGGAACAGGATGGGAAGGGTGAAGCTGTGGTCATTAAGCCTATTGATTATGGAGATCCCATGCTTGGTCATCGCAGTGTTAGCTACCGATTCAATTCATTGGGTTATCCCCGTGGTTATTGA

Protein Analysis

1376

Amino Acids

154.48

Weight (kDa)

6.32

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_20 PF00982 61 - 546 9.8e-189 Glycosyltransferase family 20
Trehalose_PPase PF02358 596 - 773 2.2e-63 Trehalose-phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1761
AasI GACNNNNNNGTC 1 cut(s) 1748
Acc65I GGTACC 1 cut(s) 2466
AccB1I GGYRCC 1 cut(s) 2466
AccBSI CCGCTC 4 cut(s) 181, 525, 2623, 2849
AccI GTMKAC 1 cut(s) 1740
AcoI YGGCCR 3 cut(s) 883, 1293, 3825
AcsI RAATTY 9 cut(s) 389, 714, 903, 1442, 1720, 1864, 2515, 3269, 3666
AcuI CTGAAG 5 cut(s) 235, 353, 1359, 3078, 3603
AdeI CACNNNGTG 1 cut(s) 2606
AfaI GTAC 8 cut(s) 64, 662, 1161, 2002, 2438, 2468, 2567, 3478
AflII CTTAAG 1 cut(s) 1987
AflIII ACRYGT 1 cut(s) 3447
AjiI CACGTC 1 cut(s) 803
AjnI CCWGG 4 cut(s) 103, 1116, 3647, 4005
AjuI GAANNNNNNNTTGG 4 cut(s) 3051, 3083, 3600, 3632
AleI CACNNNNGTG 1 cut(s) 3969
AloI GAACNNNNNNTCC 2 cut(s) 1795, 1827
Alw21I GWGCWC 2 cut(s) 2416, 3966
Alw26I GTCTC 9 cut(s) 333, 1172, 1756, 2032, 2651, 2891, 3018, 3490, 3779
AlwNI CAGNNNCTG 3 cut(s) 379, 2153, 2359
Ama87I CYCGRG 1 cut(s) 87
ApoI RAATTY 9 cut(s) 389, 714, 903, 1442, 1720, 1864, 2515, 3269, 3666
AseI ATTAAT 1 cut(s) 588
Asp700I GAANNNNTTC 4 cut(s) 434, 1621, 2768, 3007
Asp718I GGTACC 1 cut(s) 2466
AspA2I CCTAGG 1 cut(s) 2333
AspS9I GGNCC 9 cut(s) 78, 468, 502, 835, 1120, 2857, 3051, 3226, 3251
AsuC2I CCSGG 1 cut(s) 500
AvaI CYCGRG 1 cut(s) 87
AvaII GGWCC 5 cut(s) 78, 502, 1120, 3051, 3251
AvrII CCTAGG 1 cut(s) 2333
AxyI CCTNAGG 1 cut(s) 594
BaeGI GKGCMC 2 cut(s) 500, 1615
BaeI ACNNNNGTAYC 2 cut(s) 3468, 3501
BalI TGGCCA 1 cut(s) 3827
BamHI GGATCC 2 cut(s) 226, 2162
BanI GGYRCC 1 cut(s) 2466
BbsI GAAGAC 2 cut(s) 3000, 3510
Bbv12I GWGCWC 2 cut(s) 2416, 3966
BceAI ACGGC 6 cut(s) 159, 473, 1301, 2844, 3213, 3511
BcgI CGANNNNNNTGC 4 cut(s) 1922, 1956, 3908, 3942
BciT130I CCWGG 4 cut(s) 105, 1118, 3649, 4007
BclI TGATCA 2 cut(s) 3889, 3973
BcnI CCSGG 1 cut(s) 500
BcoDI GTCTC 9 cut(s) 333, 1172, 1756, 2032, 2651, 2891, 3018, 3490, 3779
BfaI CTAG 7 cut(s) 351, 1064, 1773, 2024, 2225, 2334, 3671
BfmI CTRYAG 4 cut(s) 820, 912, 1068, 1737
BfrI CTTAAG 1 cut(s) 1987
BglII AGATCT 1 cut(s) 11
BlnI CCTAGG 1 cut(s) 2333
BlpI GCTNAGC 1 cut(s) 1971
Bme1390I CCNGG 5 cut(s) 105, 500, 1118, 3649, 4007
Bme18I GGWCC 5 cut(s) 78, 502, 1120, 3051, 3251
BmeT110I CYCGRG 1 cut(s) 87
BmgBI CACGTC 1 cut(s) 803
BmgT120I GGNCC 9 cut(s) 78, 468, 502, 835, 1120, 2857, 3051, 3226, 3251
BmiI GGNNCC 8 cut(s) 80, 228, 470, 2061, 2164, 2468, 3052, 3053
BmrFI CCNGG 5 cut(s) 105, 500, 1118, 3649, 4007
BmrI ACTGGG 1 cut(s) 411
BmuI ACTGGG 1 cut(s) 411
BpiI GAAGAC 2 cut(s) 3000, 3510
BpmI CTGGAG 4 cut(s) 63, 404, 410, 2761
Bpu1102I GCTNAGC 1 cut(s) 1971
BpuEI CTTGAG 2 cut(s) 769, 1711
BpuMI CCSGG 1 cut(s) 500
BsaAI YACGTR 1 cut(s) 544
BsaBI GATNNNNATC 1 cut(s) 2148
BsaI GGTCTC 2 cut(s) 333, 3779
BsaXI ACNNNNNCTCC 4 cut(s) 797, 827, 2888, 2918
Bse1I ACTGG 4 cut(s) 417, 1235, 2019, 3934
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 142
Bse8I GATNNNNATC 1 cut(s) 2148
BseBI CCWGG 4 cut(s) 105, 1118, 3649, 4007
BseJI GATNNNNATC 1 cut(s) 2148
BseMI GCAATG 1 cut(s) 142
BseMII CTCAG 9 cut(s) 129, 300, 585, 1962, 2280, 2386, 2465, 2617, 3975
BseNI ACTGG 4 cut(s) 417, 1235, 2019, 3934
BseRI GAGGAG 3 cut(s) 1404, 1927, 2607
BseSI GKGCMC 2 cut(s) 500, 1615
BseYI CCCAGC 4 cut(s) 832, 1671, 1957, 3194
BshNI GGYRCC 1 cut(s) 2466
BsiHKAI GWGCWC 2 cut(s) 2416, 3966
BsiHKCI CYCGRG 1 cut(s) 87
BsiSI CCGG 1 cut(s) 500
BslFI GGGAC 3 cut(s) 1819, 2561, 3037
BsmAI GTCTC 9 cut(s) 333, 1172, 1756, 2032, 2651, 2891, 3018, 3490, 3779
BsmBI CGTCTC 1 cut(s) 3018
BsmFI GGGAC 3 cut(s) 1819, 2561, 3037
BsmI GAATGC 5 cut(s) 834, 1304, 3528, 3682, 3718
Bso31I GGTCTC 2 cut(s) 333, 3779
BsoBI CYCGRG 1 cut(s) 87
Bsp1286I GDGCHC 4 cut(s) 500, 1615, 2416, 3966
Bsp1407I TGTACA 2 cut(s) 1159, 2436
Bsp1720I GCTNAGC 1 cut(s) 1971
Bsp19I CCATGG 1 cut(s) 505
BspCNI CTCAG 9 cut(s) 128, 301, 586, 1963, 2281, 2385, 2466, 2616, 3976
BspHI TCATGA 2 cut(s) 1564, 1594
BspLI GGNNCC 8 cut(s) 80, 228, 470, 2061, 2164, 2468, 3052, 3053
BspMAI CTGCAG 1 cut(s) 824
BspT107I GGYRCC 1 cut(s) 2466
BspTI CTTAAG 1 cut(s) 1987
BspTNI GGTCTC 2 cut(s) 333, 3779
BsrBI CCGCTC 4 cut(s) 181, 525, 2623, 2849
BsrDI GCAATG 1 cut(s) 142
BsrGI TGTACA 2 cut(s) 1159, 2436
BsrI ACTGG 4 cut(s) 417, 1235, 2019, 3934
BssT1I CCWWGG 7 cut(s) 74, 505, 1015, 1490, 2175, 2333, 3828
Bst2UI CCWGG 4 cut(s) 105, 1118, 3649, 4007
Bst6I CTCTTC 1 cut(s) 3493
BstAFI CTTAAG 1 cut(s) 1987
BstAPI GCANNNNNTGC 1 cut(s) 3853
BstAUI TGTACA 2 cut(s) 1159, 2436
BstBAI YACGTR 1 cut(s) 544
BstC8I GCNNGC 8 cut(s) 537, 1364, 1427, 2208, 2240, 2918, 3433, 3707
BstDSI CCRYGG 3 cut(s) 505, 3229, 4117
BstEII GGTNACC 2 cut(s) 509, 2497
BstMAI GTCTC 9 cut(s) 333, 1172, 1756, 2032, 2651, 2891, 3018, 3490, 3779
BstNI CCWGG 4 cut(s) 105, 1118, 3649, 4007
BstNSI RCATGY 4 cut(s) 218, 1429, 1647, 3451
BstPI GGTNACC 2 cut(s) 509, 2497
BstSCI CCNGG 5 cut(s) 103, 498, 1116, 3647, 4005
BstSFI CTRYAG 4 cut(s) 820, 912, 1068, 1737
BstSLI GKGCMC 2 cut(s) 500, 1615
BstSNI TACGTA 1 cut(s) 544
BstV2I GAAGAC 2 cut(s) 3000, 3510
BstX2I RGATCY 7 cut(s) 11, 226, 1879, 2149, 2162, 3354, 4060
BstXI CCANNNNNNTGG 1 cut(s) 3248
BstYI RGATCY 7 cut(s) 11, 226, 1879, 2149, 2162, 3354, 4060
Bsu36I CCTNAGG 1 cut(s) 594
BtgI CCRYGG 3 cut(s) 505, 3229, 4117
BtgZI GCGATG 2 cut(s) 3431, 4061
BtrI CACGTC 1 cut(s) 803
BtsI GCAGTG 1 cut(s) 4087
Cac8I GCNNGC 8 cut(s) 537, 1364, 1427, 2208, 2240, 2918, 3433, 3707
CaiI CAGNNNCTG 3 cut(s) 379, 2153, 2359
CciI TCATGA 2 cut(s) 1564, 1594
Cfr13I GGNCC 9 cut(s) 78, 468, 502, 835, 1120, 2857, 3051, 3226, 3251
Csp6I GTAC 8 cut(s) 63, 661, 1160, 2001, 2437, 2467, 2566, 3477
CspCI CAANNNNNGTGG 2 cut(s) 3970, 4005
CviQI GTAC 8 cut(s) 63, 661, 1160, 2001, 2437, 2467, 2566, 3477
DraI TTTAAA 2 cut(s) 285, 1042
DraIII CACNNNGTG 1 cut(s) 2606
DrdI GACNNNNNNGTC 1 cut(s) 1748
DseDI GACNNNNNNGTC 1 cut(s) 1748
EaeI YGGCCR 3 cut(s) 883, 1293, 3825
Eam1104I CTCTTC 1 cut(s) 3493
EarI CTCTTC 1 cut(s) 3493
Eco105I TACGTA 1 cut(s) 544
Eco130I CCWWGG 7 cut(s) 74, 505, 1015, 1490, 2175, 2333, 3828
Eco147I AGGCCT 2 cut(s) 539, 2307
Eco31I GGTCTC 2 cut(s) 333, 3779
Eco47I GGWCC 5 cut(s) 78, 502, 1120, 3051, 3251
Eco57I CTGAAG 5 cut(s) 235, 353, 1359, 3078, 3603
Eco81I CCTNAGG 1 cut(s) 594
Eco88I CYCGRG 1 cut(s) 87
Eco91I GGTNACC 2 cut(s) 509, 2497
EcoO109I RGGNCCY 2 cut(s) 78, 3051
EcoO65I GGTNACC 2 cut(s) 509, 2497
EcoRI GAATTC 2 cut(s) 389, 1864
EcoRII CCWGG 4 cut(s) 103, 1116, 3647, 4005
EcoT14I CCWWGG 7 cut(s) 74, 505, 1015, 1490, 2175, 2333, 3828
ErhI CCWWGG 7 cut(s) 74, 505, 1015, 1490, 2175, 2333, 3828
Esp3I CGTCTC 1 cut(s) 3018
FalI AAGNNNNNCTT 2 cut(s) 999, 1031
FaqI GGGAC 3 cut(s) 1819, 2561, 3037
FauI CCCGC 1 cut(s) 3411
FauNDI CATATG 1 cut(s) 924
FbaI TGATCA 2 cut(s) 3889, 3973
FblI GTMKAC 1 cut(s) 1740
FspBI CTAG 7 cut(s) 351, 1064, 1773, 2024, 2225, 2334, 3671
GsaI CCCAGC 4 cut(s) 836, 1675, 1961, 3198
GsuI CTGGAG 4 cut(s) 63, 404, 410, 2761
HapII CCGG 1 cut(s) 500
HincII GTYRAC 1 cut(s) 1486
HindII GTYRAC 1 cut(s) 1486
HindIII AAGCTT 5 cut(s) 674, 1389, 1618, 2918, 3632
HpaI GTTAAC 1 cut(s) 1486
HpaII CCGG 1 cut(s) 500
HpyCH4IV ACGT 4 cut(s) 543, 802, 1561, 3466
HpySE526I ACGT 4 cut(s) 543, 802, 1561, 3466
KflI GGGWCCC 1 cut(s) 3051
KpnI GGTACC 1 cut(s) 2470
Ksp22I TGATCA 2 cut(s) 3889, 3973
KspAI GTTAAC 1 cut(s) 1486
LmnI GCTCC 8 cut(s) 1472, 2059, 2404, 2411, 2846, 2913, 2962, 3317
MaeI CTAG 7 cut(s) 351, 1064, 1773, 2024, 2225, 2334, 3671
MaeII ACGT 4 cut(s) 543, 802, 1561, 3466
MbiI CCGCTC 4 cut(s) 181, 525, 2623, 2849
MfeI CAATTG 4 cut(s) 394, 3207, 3480, 3780
MflI RGATCY 7 cut(s) 11, 226, 1879, 2149, 2162, 3354, 4060
MhlI GDGCHC 4 cut(s) 500, 1615, 2416, 3966
MlsI TGGCCA 1 cut(s) 3827
MluNI TGGCCA 1 cut(s) 3827
MlyI GAGTC 4 cut(s) 2543, 2583, 2594, 2972
MmeI TCCRAC 5 cut(s) 1566, 2780, 3300, 3382, 3602
Mox20I TGGCCA 1 cut(s) 3827
MroXI GAANNNNTTC 4 cut(s) 434, 1621, 2768, 3007
MscI TGGCCA 1 cut(s) 3827
MslI CAYNNNNRTG 9 cut(s) 2008, 2142, 2452, 2495, 3078, 3246, 3369, 3969, 4080
Msp20I TGGCCA 1 cut(s) 3827
MspA1I CMGCKG 4 cut(s) 2523, 2781, 3309, 3969
MspCI CTTAAG 1 cut(s) 1987
MspI CCGG 1 cut(s) 500
MspR9I CCNGG 5 cut(s) 105, 500, 1118, 3649, 4007
MunI CAATTG 4 cut(s) 394, 3207, 3480, 3780
Mva1269I GAATGC 5 cut(s) 834, 1304, 3528, 3682, 3718
MvaI CCWGG 4 cut(s) 105, 1118, 3649, 4007
NciI CCSGG 1 cut(s) 500
NcoI CCATGG 1 cut(s) 505
NdeI CATATG 1 cut(s) 924
NlaIV GGNNCC 8 cut(s) 80, 228, 470, 2061, 2164, 2468, 3052, 3053
NmeAIII GCCGAG 2 cut(s) 1733, 3890
NmuCI GTSAC 9 cut(s) 509, 767, 803, 2443, 2497, 2586, 2606, 3199, 3929
NspI RCATGY 4 cut(s) 218, 1429, 1647, 3451
OliI CACNNNNGTG 1 cut(s) 3969
PaeI GCATGC 1 cut(s) 1429
PagI TCATGA 2 cut(s) 1564, 1594
PceI AGGCCT 2 cut(s) 539, 2307
PciI ACATGT 1 cut(s) 3447
PcsI WCGNNNNNNNCGW 1 cut(s) 2861
PctI GAATGC 5 cut(s) 834, 1304, 3528, 3682, 3718
PdmI GAANNNNTTC 4 cut(s) 434, 1621, 2768, 3007
PfoI TCCNGGA 2 cut(s) 103, 4005
PleI GAGTC 4 cut(s) 2542, 2582, 2593, 2972
PpsI GAGTC 4 cut(s) 2542, 2582, 2593, 2972
Ppu21I YACGTR 1 cut(s) 544
PpuMI RGGWCCY 2 cut(s) 78, 3051
PscI ACATGT 1 cut(s) 3447
PshBI ATTAAT 1 cut(s) 588
PsiI TTATAA 1 cut(s) 1761
Psp5II RGGWCCY 2 cut(s) 78, 3051
Psp6I CCWGG 4 cut(s) 103, 1116, 3647, 4005
PspEI GGTNACC 2 cut(s) 509, 2497
PspFI CCCAGC 4 cut(s) 832, 1671, 1957, 3194
PspGI CCWGG 4 cut(s) 103, 1116, 3647, 4005
PspN4I GGNNCC 8 cut(s) 80, 228, 470, 2061, 2164, 2468, 3052, 3053
PspPI GGNCC 9 cut(s) 78, 468, 502, 835, 1120, 2857, 3051, 3226, 3251
PspPPI RGGWCCY 2 cut(s) 78, 3051
PsrI GAACNNNNNNTAC 4 cut(s) 1065, 1097, 1166, 1198
PstI CTGCAG 1 cut(s) 824
PstNI CAGNNNCTG 3 cut(s) 379, 2153, 2359
PsuI RGATCY 7 cut(s) 11, 226, 1879, 2149, 2162, 3354, 4060
PvuII CAGCTG 3 cut(s) 2781, 3309, 3969
RsaI GTAC 8 cut(s) 64, 662, 1161, 2002, 2438, 2468, 2567, 3478
RsaNI GTAC 8 cut(s) 63, 661, 1160, 2001, 2437, 2467, 2566, 3477
RseI CAYNNNNRTG 9 cut(s) 2008, 2142, 2452, 2495, 3078, 3246, 3369, 3969, 4080
Sau96I GGNCC 9 cut(s) 78, 468, 502, 835, 1120, 2857, 3051, 3226, 3251
SchI GAGTC 4 cut(s) 2543, 2583, 2594, 2972
ScrFI CCNGG 5 cut(s) 105, 500, 1118, 3649, 4007
SduI GDGCHC 4 cut(s) 500, 1615, 2416, 3966
SfcI CTRYAG 4 cut(s) 820, 912, 1068, 1737
SinI GGWCC 5 cut(s) 78, 502, 1120, 3051, 3251
SmiMI CAYNNNNRTG 9 cut(s) 2008, 2142, 2452, 2495, 3078, 3246, 3369, 3969, 4080
SmlI CTYRAG 3 cut(s) 748, 1690, 1987
SmoI CTYRAG 3 cut(s) 748, 1690, 1987
SnaBI TACGTA 1 cut(s) 544
SphI GCATGC 1 cut(s) 1429
SseBI AGGCCT 2 cut(s) 539, 2307
SspI AATATT 2 cut(s) 1785, 3067
SspMI CTAG 7 cut(s) 351, 1064, 1773, 2024, 2225, 2334, 3671
StuI AGGCCT 2 cut(s) 539, 2307
StyD4I CCNGG 5 cut(s) 103, 498, 1116, 3647, 4005
StyI CCWWGG 7 cut(s) 74, 505, 1015, 1490, 2175, 2333, 3828
TaiI ACGT 4 cut(s) 546, 805, 1564, 3469
TaqI TCGA 2 cut(s) 721, 736
TatI WGTACW 4 cut(s) 62, 1159, 2000, 2436
TauI GCSGC 2 cut(s) 888, 3775
TseFI GTSAC 9 cut(s) 509, 767, 803, 2443, 2497, 2586, 2606, 3199, 3929
Tsp45I GTSAC 9 cut(s) 509, 767, 803, 2443, 2497, 2586, 2606, 3199, 3929
TspGWI ACGGA 1 cut(s) 2096
Vha464I CTTAAG 1 cut(s) 1987
VpaK11BI GGWCC 5 cut(s) 78, 502, 1120, 3051, 3251
VspI ATTAAT 1 cut(s) 588
XapI RAATTY 9 cut(s) 389, 714, 903, 1442, 1720, 1864, 2515, 3269, 3666
XceI RCATGY 4 cut(s) 218, 1429, 1647, 3451
XcmI CCANNNNNNNNNTGG 4 cut(s) 2182, 2360, 3392, 4013
XmaJI CCTAGG 1 cut(s) 2333
XmiI GTMKAC 1 cut(s) 1740
XmnI GAANNNNTTC 4 cut(s) 434, 1621, 2768, 3007
XspI CTAG 7 cut(s) 351, 1064, 1773, 2024, 2225, 2334, 3671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.