alpha,alpha-trehalose-phosphate synthase UDP-forming
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1016, 2130 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1597, 2173 |
| AccBSI | CCGCTC | 2 cut(s) | 520, 1905 |
| AccIII | TCCGGA | 1 cut(s) | 496 |
| AciI | CCGC | 9 cut(s) | 520, 853, 883, 1099, 1558, 1612, 1905, 2498, 2556 |
| AclI | AACGTT | 1 cut(s) | 1663 |
| AclWI | GGATC | 5 cut(s) | 257, 270, 2141, 2167, 2193 |
| AcoI | YGGCCR | 2 cut(s) | 880, 1062 |
| AcsI | RAATTY | 6 cut(s) | 55, 741, 1122, 1690, 1698, 2565 |
| AcuI | CTGAAG | 5 cut(s) | 232, 350, 1073, 1863, 1880 |
| AdeI | CACNNNGTG | 1 cut(s) | 1597 |
| AfaI | GTAC | 9 cut(s) | 245, 893, 1349, 1417, 1423, 1623, 1840, 2202, 2480 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 85, 415, 1597, 2127, 2156, 2173, 2555 |
| AflIII | ACRYGT | 3 cut(s) | 48, 783, 2370 |
| AjiI | CACGTC | 2 cut(s) | 49, 2001 |
| AjnI | CCWGG | 5 cut(s) | 1113, 1219, 1332, 2166, 2474 |
| Alw21I | GWGCWC | 3 cut(s) | 754, 1145, 2393 |
| Alw26I | GTCTC | 2 cut(s) | 1438, 2546 |
| AlwI | GGATC | 5 cut(s) | 257, 270, 2141, 2167, 2193 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 376, 2060, 2432 |
| Aor13HI | TCCGGA | 1 cut(s) | 496 |
| AoxI | GGCC | 8 cut(s) | 464, 880, 925, 969, 1062, 2169, 2233, 2521 |
| ApeKI | GCWGC | 8 cut(s) | 421, 484, 1084, 1274, 1872, 1964, 2397, 2426 |
| ApoI | RAATTY | 6 cut(s) | 55, 741, 1122, 1690, 1698, 2565 |
| AseI | ATTAAT | 1 cut(s) | 1308 |
| AspLEI | GCGC | 3 cut(s) | 196, 2120, 2326 |
| AspS9I | GGNCC | 6 cut(s) | 499, 720, 925, 1336, 1608, 2233 |
| AsuC2I | CCSGG | 2 cut(s) | 43, 1091 |
| AsuHPI | GGTGA | 4 cut(s) | 100, 592, 614, 1492 |
| AvaII | GGWCC | 4 cut(s) | 499, 720, 1336, 1608 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 235, 268 |
| BalI | TGGCCA | 1 cut(s) | 1064 |
| BamHI | GGATCC | 1 cut(s) | 262 |
| BanI | GGYRCC | 2 cut(s) | 1016, 2130 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 643, 675 |
| BauI | CACGAG | 1 cut(s) | 663 |
| Bbv12I | GWGCWC | 3 cut(s) | 754, 1145, 2393 |
| BbvI | GCAGC | 8 cut(s) | 408, 471, 1096, 1261, 1884, 1976, 2384, 2438 |
| BccI | CCATC | 9 cut(s) | 281, 304, 1054, 1316, 1465, 1790, 1983, 2084, 2142 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1647, 1681, 1919, 1953 |
| BciT130I | CCWGG | 5 cut(s) | 1115, 1221, 1334, 2168, 2476 |
| BciVI | GTATCC | 2 cut(s) | 909, 1970 |
| BclI | TGATCA | 1 cut(s) | 582 |
| BcnI | CCSGG | 2 cut(s) | 43, 1091 |
| BcoDI | GTCTC | 2 cut(s) | 1438, 2546 |
| BfaI | CTAG | 3 cut(s) | 72, 2138, 2466 |
| BfmI | CTRYAG | 3 cut(s) | 715, 817, 2217 |
| BfoI | RGCGCY | 1 cut(s) | 2121 |
| BfuI | GTATCC | 2 cut(s) | 909, 1970 |
| BglII | AGATCT | 3 cut(s) | 11, 2032, 2436 |
| BlpI | GCTNAGC | 1 cut(s) | 1968 |
| BmcAI | AGTACT | 1 cut(s) | 1840 |
| Bme1390I | CCNGG | 7 cut(s) | 43, 1091, 1115, 1221, 1334, 2168, 2476 |
| Bme18I | GGWCC | 4 cut(s) | 499, 720, 1336, 1608 |
| BmgBI | CACGTC | 2 cut(s) | 49, 2001 |
| BmgT120I | GGNCC | 6 cut(s) | 499, 720, 925, 1336, 1608, 2233 |
| BmiI | GGNNCC | 7 cut(s) | 264, 722, 1018, 1338, 1610, 2095, 2132 |
| BmrFI | CCNGG | 7 cut(s) | 43, 1091, 1115, 1221, 1334, 2168, 2476 |
| BmrI | ACTGGG | 1 cut(s) | 1830 |
| BmsI | GCATC | 9 cut(s) | 214, 334, 1053, 1071, 1086, 1311, 1501, 2131, 2352 |
| BmuI | ACTGGG | 1 cut(s) | 1830 |
| BpmI | CTGGAG | 1 cut(s) | 401 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2023 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1968 |
| BpuEI | CTTGAG | 2 cut(s) | 2403, 2528 |
| BpuMI | CCSGG | 2 cut(s) | 43, 1091 |
| BsaBI | GATNNNNATC | 2 cut(s) | 261, 2145 |
| BsaJI | CCNNGG | 8 cut(s) | 42, 83, 1065, 1219, 1487, 2121, 2172, 2549 |
| BsaWI | WCCGGW | 1 cut(s) | 496 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 85, 415, 1597, 2127, 2156, 2173, 2555 |
| Bse118I | RCCGGY | 1 cut(s) | 907 |
| Bse1I | ACTGG | 5 cut(s) | 266, 1232, 1610, 1836, 2016 |
| Bse3DI | GCAATG | 1 cut(s) | 2510 |
| Bse8I | GATNNNNATC | 2 cut(s) | 261, 2145 |
| BseAI | TCCGGA | 1 cut(s) | 496 |
| BseBI | CCWGG | 5 cut(s) | 1115, 1221, 1334, 2168, 2476 |
| BseDI | CCNNGG | 8 cut(s) | 42, 83, 1065, 1219, 1487, 2121, 2172, 2549 |
| BseGI | GGATG | 8 cut(s) | 38, 229, 262, 949, 1159, 1327, 2356, 2506 |
| BseJI | GATNNNNATC | 2 cut(s) | 261, 2145 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 85, 415, 1597, 2127, 2156, 2173, 2555 |
| BseMI | GCAATG | 1 cut(s) | 2510 |
| BseMII | CTCAG | 6 cut(s) | 77, 230, 737, 1449, 1959, 2424 |
| BseNI | ACTGG | 5 cut(s) | 266, 1232, 1610, 1836, 2016 |
| BseRI | GAGGAG | 1 cut(s) | 398 |
| BseX3I | CGGCCG | 1 cut(s) | 880 |
| BseXI | GCAGC | 8 cut(s) | 408, 471, 1096, 1261, 1884, 1976, 2384, 2438 |
| BseYI | CCCAGC | 2 cut(s) | 1668, 2007 |
| BsgI | GTGCAG | 1 cut(s) | 2383 |
| Bsh1285I | CGRYCG | 2 cut(s) | 883, 2088 |
| BshFI | GGCC | 8 cut(s) | 466, 882, 927, 971, 1064, 2171, 2235, 2523 |
| BshNI | GGYRCC | 2 cut(s) | 1016, 2130 |
| BsiEI | CGRYCG | 2 cut(s) | 883, 2088 |
| BsiHKAI | GWGCWC | 3 cut(s) | 754, 1145, 2393 |
| BsiSI | CCGG | 4 cut(s) | 42, 497, 908, 1091 |
| BslFI | GGGAC | 5 cut(s) | 59, 316, 1322, 1594, 2558 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 85, 415, 1597, 2127, 2156, 2173, 2555 |
| BsmAI | GTCTC | 2 cut(s) | 1438, 2546 |
| BsmFI | GGGAC | 5 cut(s) | 59, 316, 1322, 1594, 2558 |
| BsmI | GAATGC | 2 cut(s) | 831, 2326 |
| BsnI | GGCC | 8 cut(s) | 466, 882, 927, 971, 1064, 2171, 2235, 2523 |
| Bsp1286I | GDGCHC | 3 cut(s) | 754, 1145, 2393 |
| Bsp13I | TCCGGA | 1 cut(s) | 496 |
| Bsp1407I | TGTACA | 2 cut(s) | 891, 1621 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1968 |
| Bsp19I | CCATGG | 2 cut(s) | 1065, 2172 |
| BspACI | CCGC | 9 cut(s) | 520, 853, 883, 1099, 1558, 1612, 1905, 2498, 2556 |
| BspANI | GGCC | 8 cut(s) | 466, 882, 927, 971, 1064, 2171, 2235, 2523 |
| BspCNI | CTCAG | 6 cut(s) | 76, 229, 738, 1448, 1960, 2425 |
| BspEI | TCCGGA | 1 cut(s) | 496 |
| BspHI | TCATGA | 1 cut(s) | 1983 |
| BspLI | GGNNCC | 7 cut(s) | 264, 722, 1018, 1338, 1610, 2095, 2132 |
| BspPI | GGATC | 5 cut(s) | 257, 270, 2141, 2167, 2193 |
| BspT107I | GGYRCC | 2 cut(s) | 1016, 2130 |
| BsrBI | CCGCTC | 2 cut(s) | 520, 1905 |
| BsrDI | GCAATG | 1 cut(s) | 2510 |
| BsrFI | RCCGGY | 1 cut(s) | 907 |
| BsrGI | TGTACA | 2 cut(s) | 891, 1621 |
| BsrI | ACTGG | 5 cut(s) | 266, 1232, 1610, 1836, 2016 |
| BssAI | RCCGGY | 1 cut(s) | 907 |
| BssECI | CCNNGG | 8 cut(s) | 42, 83, 1065, 1219, 1487, 2121, 2172, 2549 |
| BssSI | CACGAG | 1 cut(s) | 663 |
| BssT1I | CCWWGG | 5 cut(s) | 83, 1065, 2121, 2172, 2549 |
| Bst2BI | CACGAG | 1 cut(s) | 663 |
| Bst2UI | CCWGG | 5 cut(s) | 1115, 1221, 1334, 2168, 2476 |
| Bst4CI | ACNGT | 6 cut(s) | 134, 307, 889, 1250, 1891, 2452 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 376, 2397 |
| BstAUI | TGTACA | 2 cut(s) | 891, 1621 |
| BstC8I | GCNNGC | 6 cut(s) | 534, 1361, 1638, 1642, 2237, 2446 |
| BstDSI | CCRYGG | 3 cut(s) | 1065, 1487, 2172 |
| BstF5I | GGATG | 8 cut(s) | 38, 229, 262, 949, 1159, 1327, 2356, 2506 |
| BstH2I | RGCGCY | 1 cut(s) | 2121 |
| BstHHI | GCGC | 3 cut(s) | 196, 2120, 2326 |
| BstMAI | GTCTC | 2 cut(s) | 1438, 2546 |
| BstMCI | CGRYCG | 2 cut(s) | 883, 2088 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 376, 529, 1558, 2004, 2115, 2388, 2397 |
| BstNI | CCWGG | 5 cut(s) | 1115, 1221, 1334, 2168, 2476 |
| BstNSI | RCATGY | 5 cut(s) | 215, 484, 1644, 2374, 2448 |
| BstSCI | CCNGG | 7 cut(s) | 41, 1089, 1113, 1219, 1332, 2166, 2474 |
| BstSFI | CTRYAG | 3 cut(s) | 715, 817, 2217 |
| BstV1I | GCAGC | 8 cut(s) | 408, 471, 1096, 1261, 1884, 1976, 2384, 2438 |
| BstX2I | RGATCY | 4 cut(s) | 11, 262, 2032, 2436 |
| BstYI | RGATCY | 4 cut(s) | 11, 262, 2032, 2436 |
| BstZI | CGGCCG | 1 cut(s) | 880 |
| BsuI | GTATCC | 2 cut(s) | 909, 1970 |
| BsuRI | GGCC | 8 cut(s) | 466, 882, 927, 971, 1064, 2171, 2235, 2523 |
| BtgI | CCRYGG | 3 cut(s) | 1065, 1487, 2172 |
| BtrI | CACGTC | 2 cut(s) | 49, 2001 |
| BtsCI | GGATG | 8 cut(s) | 38, 229, 262, 949, 1159, 1327, 2356, 2506 |
| BtsI | GCAGTG | 2 cut(s) | 133, 752 |
| BtsIMutI | CAGTG | 6 cut(s) | 133, 752, 894, 1191, 1887, 2448 |
| Cac8I | GCNNGC | 6 cut(s) | 534, 1361, 1638, 1642, 2237, 2446 |
| CaiI | CAGNNNCTG | 3 cut(s) | 376, 2060, 2432 |
| CciI | TCATGA | 1 cut(s) | 1983 |
| CfoI | GCGC | 3 cut(s) | 196, 2120, 2326 |
| Cfr10I | RCCGGY | 1 cut(s) | 907 |
| Cfr13I | GGNCC | 6 cut(s) | 499, 720, 925, 1336, 1608, 2233 |
| CsiI | ACCWGGT | 1 cut(s) | 1332 |
| Csp6I | GTAC | 9 cut(s) | 244, 892, 1348, 1416, 1422, 1622, 1839, 2201, 2479 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 443, 478 |
| CviQI | GTAC | 9 cut(s) | 244, 892, 1348, 1416, 1422, 1622, 1839, 2201, 2479 |
| DraI | TTTAAA | 2 cut(s) | 1039, 1128 |
| DraIII | CACNNNGTG | 1 cut(s) | 1597 |
| EaeI | YGGCCR | 2 cut(s) | 880, 1062 |
| EagI | CGGCCG | 1 cut(s) | 880 |
| EclXI | CGGCCG | 1 cut(s) | 880 |
| Eco130I | CCWWGG | 5 cut(s) | 83, 1065, 2121, 2172, 2549 |
| Eco147I | AGGCCT | 1 cut(s) | 2523 |
| Eco47I | GGWCC | 4 cut(s) | 499, 720, 1336, 1608 |
| Eco52I | CGGCCG | 1 cut(s) | 880 |
| Eco57I | CTGAAG | 5 cut(s) | 232, 350, 1073, 1863, 1880 |
| EcoO109I | RGGNCCY | 1 cut(s) | 720 |
| EcoRII | CCWGG | 5 cut(s) | 1113, 1219, 1332, 2166, 2474 |
| EcoT14I | CCWWGG | 5 cut(s) | 83, 1065, 2121, 2172, 2549 |
| ErhI | CCWWGG | 5 cut(s) | 83, 1065, 2121, 2172, 2549 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 662, 694 |
| FaqI | GGGAC | 5 cut(s) | 59, 316, 1322, 1594, 2558 |
| FauI | CCCGC | 3 cut(s) | 846, 1092, 1619 |
| FauNDI | CATATG | 1 cut(s) | 538 |
| FbaI | TGATCA | 1 cut(s) | 582 |
| FokI | GGATG | 8 cut(s) | 25, 236, 269, 936, 1166, 1334, 2363, 2513 |
| FspBI | CTAG | 3 cut(s) | 72, 2138, 2466 |
| GlaI | GCGC | 3 cut(s) | 195, 2119, 2325 |
| GsaI | CCCAGC | 2 cut(s) | 1672, 2011 |
| GsuI | CTGGAG | 1 cut(s) | 401 |
| HaeII | RGCGCY | 1 cut(s) | 2121 |
| HaeIII | GGCC | 8 cut(s) | 466, 882, 927, 971, 1064, 2171, 2235, 2523 |
| HapII | CCGG | 4 cut(s) | 42, 497, 908, 1091 |
| HhaI | GCGC | 3 cut(s) | 196, 2120, 2326 |
| Hin6I | GCGC | 3 cut(s) | 194, 2118, 2324 |
| HinP1I | GCGC | 3 cut(s) | 194, 2118, 2324 |
| HincII | GTYRAC | 2 cut(s) | 139, 337 |
| HindII | GTYRAC | 2 cut(s) | 139, 337 |
| HindIII | AAGCTT | 1 cut(s) | 671 |
| HpaII | CCGG | 4 cut(s) | 42, 497, 908, 1091 |
| HphI | GGTGA | 4 cut(s) | 100, 592, 614, 1492 |
| Hpy166II | GTNNAC | 6 cut(s) | 139, 337, 613, 892, 1424, 1483 |
| Hpy8I | GTNNAC | 6 cut(s) | 139, 337, 613, 892, 1424, 1483 |
| HpyCH4III | ACNGT | 6 cut(s) | 134, 307, 889, 1250, 1891, 2452 |
| HpyCH4IV | ACGT | 6 cut(s) | 48, 785, 1521, 1663, 2000, 2405 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 376, 529, 1558, 2004, 2115, 2388, 2397 |
| HpySE526I | ACGT | 6 cut(s) | 48, 785, 1521, 1663, 2000, 2405 |
| HspAI | GCGC | 3 cut(s) | 194, 2118, 2324 |
| Kpn2I | TCCGGA | 1 cut(s) | 496 |
| Ksp22I | TGATCA | 1 cut(s) | 582 |
| LmnI | GCTCC | 7 cut(s) | 418, 1140, 1469, 1592, 1633, 2099, 2434 |
| Lsp1109I | GCAGC | 8 cut(s) | 408, 471, 1096, 1261, 1884, 1976, 2384, 2438 |
| LweI | GCATC | 9 cut(s) | 214, 334, 1053, 1071, 1086, 1311, 1501, 2131, 2352 |
| MabI | ACCWGGT | 1 cut(s) | 1332 |
| MaeI | CTAG | 3 cut(s) | 72, 2138, 2466 |
| MaeII | ACGT | 6 cut(s) | 48, 785, 1521, 1663, 2000, 2405 |
| MaeIII | GTNAC | 6 cut(s) | 128, 800, 1186, 1704, 2266, 2506 |
| MbiI | CCGCTC | 2 cut(s) | 520, 1905 |
| MboII | GAAGA | 8 cut(s) | 155, 190, 193, 371, 626, 1012, 1809, 1873 |
| MfeI | CAATTG | 1 cut(s) | 1734 |
| MflI | RGATCY | 4 cut(s) | 11, 262, 2032, 2436 |
| MhlI | GDGCHC | 3 cut(s) | 754, 1145, 2393 |
| MlsI | TGGCCA | 1 cut(s) | 1064 |
| MluNI | TGGCCA | 1 cut(s) | 1064 |
| MlyI | GAGTC | 3 cut(s) | 61, 88, 1215 |
| MmeI | TCCRAC | 3 cut(s) | 9, 662, 2434 |
| Mox20I | TGGCCA | 1 cut(s) | 1064 |
| MroI | TCCGGA | 1 cut(s) | 496 |
| MscI | TGGCCA | 1 cut(s) | 1064 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2139 |
| Msp20I | TGGCCA | 1 cut(s) | 1064 |
| MspA1I | CMGCKG | 3 cut(s) | 1967, 2007, 2498 |
| MspI | CCGG | 4 cut(s) | 42, 497, 908, 1091 |
| MspR9I | CCNGG | 7 cut(s) | 43, 1091, 1115, 1221, 1334, 2168, 2476 |
| MunI | CAATTG | 1 cut(s) | 1734 |
| Mva1269I | GAATGC | 2 cut(s) | 831, 2326 |
| MvaI | CCWGG | 5 cut(s) | 1115, 1221, 1334, 2168, 2476 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 376, 529, 1558, 2004, 2115, 2388, 2397 |
| NciI | CCSGG | 2 cut(s) | 43, 1091 |
| NcoI | CCATGG | 2 cut(s) | 1065, 2172 |
| NdeI | CATATG | 1 cut(s) | 538 |
| NlaIV | GGNNCC | 7 cut(s) | 264, 722, 1018, 1338, 1610, 2095, 2132 |
| NmuCI | GTSAC | 5 cut(s) | 128, 800, 1186, 1704, 2506 |
| NspI | RCATGY | 5 cut(s) | 215, 484, 1644, 2374, 2448 |
| PaeI | GCATGC | 2 cut(s) | 1644, 2448 |
| PagI | TCATGA | 1 cut(s) | 1983 |
| PceI | AGGCCT | 1 cut(s) | 2523 |
| PciI | ACATGT | 1 cut(s) | 2370 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 138 |
| PctI | GAATGC | 2 cut(s) | 831, 2326 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1597, 2173 |
| PleI | GAGTC | 3 cut(s) | 61, 88, 1214 |
| PpsI | GAGTC | 3 cut(s) | 61, 88, 1214 |
| PpuMI | RGGWCCY | 1 cut(s) | 720 |
| PscI | ACATGT | 1 cut(s) | 2370 |
| PshBI | ATTAAT | 1 cut(s) | 1308 |
| Psp1406I | AACGTT | 1 cut(s) | 1663 |
| Psp5II | RGGWCCY | 1 cut(s) | 720 |
| Psp6I | CCWGG | 5 cut(s) | 1113, 1219, 1332, 2166, 2474 |
| PspFI | CCCAGC | 2 cut(s) | 1668, 2007 |
| PspGI | CCWGG | 5 cut(s) | 1113, 1219, 1332, 2166, 2474 |
| PspN4I | GGNNCC | 7 cut(s) | 264, 722, 1018, 1338, 1610, 2095, 2132 |
| PspPI | GGNCC | 6 cut(s) | 499, 720, 925, 1336, 1608, 2233 |
| PspPPI | RGGWCCY | 1 cut(s) | 720 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1101, 1133 |
| PstNI | CAGNNNCTG | 3 cut(s) | 376, 2060, 2432 |
| PsuI | RGATCY | 4 cut(s) | 11, 262, 2032, 2436 |
| PvuII | CAGCTG | 2 cut(s) | 1967, 2007 |
| RsaI | GTAC | 9 cut(s) | 245, 893, 1349, 1417, 1423, 1623, 1840, 2202, 2480 |
| RsaNI | GTAC | 9 cut(s) | 244, 892, 1348, 1416, 1422, 1622, 1839, 2201, 2479 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2139 |
| Sau96I | GGNCC | 6 cut(s) | 499, 720, 925, 1336, 1608, 2233 |
| ScaI | AGTACT | 1 cut(s) | 1840 |
| SchI | GAGTC | 3 cut(s) | 61, 88, 1215 |
| ScrFI | CCNGG | 7 cut(s) | 43, 1091, 1115, 1221, 1334, 2168, 2476 |
| SduI | GDGCHC | 3 cut(s) | 754, 1145, 2393 |
| SexAI | ACCWGGT | 1 cut(s) | 1332 |
| SfaNI | GCATC | 9 cut(s) | 214, 334, 1053, 1071, 1086, 1311, 1501, 2131, 2352 |
| SfcI | CTRYAG | 3 cut(s) | 715, 817, 2217 |
| SinI | GGWCC | 4 cut(s) | 499, 720, 1336, 1608 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2139 |
| SmlI | CTYRAG | 3 cut(s) | 7, 2418, 2543 |
| SmoI | CTYRAG | 3 cut(s) | 7, 2418, 2543 |
| SphI | GCATGC | 2 cut(s) | 1644, 2448 |
| SseBI | AGGCCT | 1 cut(s) | 2523 |
| SsiI | CCGC | 9 cut(s) | 520, 853, 883, 1099, 1558, 1612, 1905, 2498, 2556 |
| SspI | AATATT | 3 cut(s) | 875, 1782, 2587 |
| SspMI | CTAG | 3 cut(s) | 72, 2138, 2466 |
| StuI | AGGCCT | 1 cut(s) | 2523 |
| StyD4I | CCNGG | 7 cut(s) | 41, 1089, 1113, 1219, 1332, 2166, 2474 |
| StyI | CCWWGG | 5 cut(s) | 83, 1065, 2121, 2172, 2549 |
| TaaI | ACNGT | 6 cut(s) | 134, 307, 889, 1250, 1891, 2452 |
| TaiI | ACGT | 6 cut(s) | 51, 788, 1524, 1666, 2003, 2408 |
| TaqI | TCGA | 3 cut(s) | 2247, 2387, 2580 |
| TaqII | GACCGA | 1 cut(s) | 2102 |
| TatI | WGTACW | 6 cut(s) | 891, 1347, 1421, 1621, 1838, 2200 |
| TauI | GCSGC | 3 cut(s) | 523, 885, 1561 |
| TscAI | CASTG | 6 cut(s) | 133, 759, 894, 1191, 1894, 2455 |
| TseFI | GTSAC | 5 cut(s) | 128, 800, 1186, 1704, 2506 |
| TseI | GCWGC | 8 cut(s) | 421, 484, 1084, 1274, 1872, 1964, 2397, 2426 |
| Tsp45I | GTSAC | 5 cut(s) | 128, 800, 1186, 1704, 2506 |
| TspDTI | ATGAA | 8 cut(s) | 753, 858, 980, 1343, 1432, 1972, 2081, 2403 |
| TspRI | CASTG | 6 cut(s) | 133, 759, 894, 1191, 1894, 2455 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1597, 2173 |
| VpaK11BI | GGWCC | 4 cut(s) | 499, 720, 1336, 1608 |
| VspI | ATTAAT | 1 cut(s) | 1308 |
| XapI | RAATTY | 6 cut(s) | 55, 741, 1122, 1690, 1698, 2565 |
| XbaI | TCTAGA | 1 cut(s) | 2137 |
| XceI | RCATGY | 5 cut(s) | 215, 484, 1644, 2374, 2448 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2179 |
| XspI | CTAG | 3 cut(s) | 72, 2138, 2466 |
| ZrmI | AGTACT | 1 cut(s) | 1840 |