Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005347

Physical Location & Seq

Genomic Coordinates Reverse (-)

26897005 .. 26899434

Gene Structure 2430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G71370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGATTCATCGCCGCCGAAGACTATCACCAAGGCTCTGCCGCGTTTCTCTGAACTCAAACCTCCGCTCTCAGAAGATATCATCGAGGCGCTTGACCGGTCCGGTTTCGAGGTCTGCACTCCGGTTCAGGCCGAGACGATCCCTTTCCTCTGCAGCCACAAGGATGTTGTCGTCGACGCAGCCACTGGTTCTGGAAAAACCCTAGCTTTCCTCCTTCCCTTCATAGAGATTATCCGTCGATCCAACTCCTACCCTCCGAAGCCACACCAGGTAATGGGGGTGATTATATCGCCAACTAGAGAGCTATCAGCGCAGATACATAAGGTGGCAGAGCCATTTGTCTCGACTTTGCCAAATGTGAACTCTGTCCTGCTTGTTGGAGGTCGAGAGGTGGAAGCTGACATGAATACTCTCGAAGAAGAAGGAGCCAATCTCTTGATCGGCACCCCTGGAAGGCTTTCAGATATGATGAAACGAATGGAGTTTCTGGATTTTCGAAATCTCGAGATTCTTATCTTAGATGAGGCCGATAGACTTTTGGATATGGGGTTCCAGAAGCAGGTCAATTACATTATATCTCGCTTGCCAAAGCAACGTAGGACTGGCCTCTTTTCAGCTACACAAACACAAGCTGTTGCAGACCTGGCCAAGGCTGGCCTTAGGAATGCTATGGAAGTTATATCGGGAGCTGAGTCAAAGTCGAAAACGTCTTCTGGTCTGTATTGTGAGTATTTAAAATGCGAAGCAGATCAAAAGTCATCACAACTAGTGCATCTCCTGATCGAGAACAAAAATAAAAAGCTTGTCGTATTCTTCATGACATGTGCTTGTGTTGATTACTGGGGACTCGTACTTTCAAAAATTCCTACCCTCAAGTCCATTTCCTTCTTTTCCACCCATGGGAAGATGGATCAGAAAGGTAGAGACACGGCATTAGCTTCGTTTACAGAGGCATCAAGCGGTGTCCTTCTATGCACAGATGTCGCTGCACGTGGACTTGACATTCCAGGCATCGATTACGTTGTTCAGTATGATCCCCCACAAGACCCAGATGTATTTATCCATAGGGTTGGCAGGACTGCAAGAATGGAAAGACAAGGTAGGGCCATTGTGTTTTTAATGCCCAAGGAGACAGACTATGTAGAGTTCATGCGCATTCGAAGGGTCCCTCTTCAGGAGAGAAAATGCTCTGAGAACGCTTCTGATGTCATCCCGATTATACGTTCACTAGCCATCAAGGACCGGGCAGTGTTGGAGAAGGGATTACAGGCATTTGTTTCCTTTGTCCGTGCTTATAAGGAGCATCACTGCTCTTACATTTTCAGTTGGAAAGGACTTGAAATCGGAAAGTTAGCCATGGGATATGGCATCTTGTCTTTTCCTTACATATCTGAAGTTAAACAAGACAGAATTGGCATTGTCGGTTTTACACCTGTCCAAGGCATCACGTTTGAGGACATAAAATACAAGAACAAATCTCGGGAGAAACAAAGACAGCAAAACTTACTAGCAAGGAAAGACAAACTGCAACAAGAAAAGAGAGGGAAACGCAAGAAAAGCTCCAAAGAGGCGGTTGATGATTCTAACAAAGCGTCGAGAAAGAGAAAGTTAACGGGGAGGCAAAGACAAACTATCCAAACAGCGCAAGATGAAGAAGAAATGAATTTGAGATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003727 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008187 GO:0008266 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

558

Amino Acids

62.82

Weight (kDa)

9.18

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	40 - 214	5.9e-43	DEAD/DEAH box helicase
Helicase_C	PF00271	252 - 363	2.9e-25	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	414 - 462	4.9e-14	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71280 AT1G71280 AT1G71370 AT5G05450
fragaria_vesca	FvH4_6g01590 FvH4_6g01590 FvH4_6g01590 FvH4_6g03480 FvH4_7g25130 FvH4_7g25130 FvH4_7g25130
malus_domestica	MD01G1158100.v1.1 MD07G1226800.v1.1
prunus_persica	Prupe.2G256400_v2.0.a1
pyrus_communis	pycom01g17480 pycom07g20540
rosa_chinensis	RchiOBHm_Chr1g0371021 RchiOBHm_Chr1g0371031
rosa_laevigata	RLG00000026991
rosa_multiflora	Rmu_co8450187.1_g000001 Rmu_sc0001018.1_g000027 Rmu_sc0003272.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286030
rosa_rugosa	Rorug01G0360900
rosa_samantha	Rh1AG371200 Rh1BG334700 Rh1CG348000 Rh1DG365900
rosa_wichuraiana	Rw1G032650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1296
Acc16I	TGCGCA	1 cut(s)	1154
Acc36I	ACCTGC	1 cut(s)	550
AccB1I	GGYRCC	1 cut(s)	443
AccB7I	CCANNNNNTGG	1 cut(s)	274
AccBSI	CCGCTC	1 cut(s)	67
AccI	GTMKAC	1 cut(s)	174
AccII	CGCG	1 cut(s)	43
AciI	CCGC	5 cut(s)	14, 41, 65, 960, 1571
AclWI	GGATC	4 cut(s)	133, 234, 918, 1028
AcoI	YGGCCR	1 cut(s)	645
AcsI	RAATTY	2 cut(s)	861, 1663
AcuI	CTGAAG	2 cut(s)	1157, 1413
AcvI	CACGTG	1 cut(s)	992
AfaI	GTAC	1 cut(s)	852
AfiI	CCNNNNNNNGG	7 cut(s)	274, 453, 559, 649, 900, 1174, 1439
AflIII	ACRYGT	1 cut(s)	821
AgeI	ACCGGT	1 cut(s)	96
AgsI	TTSAA	2 cut(s)	858, 1340
AhlI	ACTAGT	1 cut(s)	766
AjnI	CCWGG	4 cut(s)	267, 448, 642, 1006
AloI	GAACNNNNNNTCC	2 cut(s)	533, 565
AluBI	AGCT	9 cut(s)	206, 304, 398, 617, 632, 689, 802, 938, 1560
AluI	AGCT	9 cut(s)	206, 304, 398, 617, 632, 689, 802, 938, 1560
Alw26I	GTCTC	4 cut(s)	128, 346, 918, 1124
AlwI	GGATC	4 cut(s)	133, 234, 918, 1028
AlwNI	CAGNNNCTG	1 cut(s)	185
Ama87I	CYCGRG	2 cut(s)	503, 1479
AoxI	GGCC	6 cut(s)	129, 525, 604, 645, 655, 1104
ApeKI	GCWGC	3 cut(s)	153, 179, 986
ApoI	RAATTY	2 cut(s)	861, 1663
AsiGI	ACCGGT	1 cut(s)	96
Asp700I	GAANNNNTTC	1 cut(s)	457
AspLEI	GCGC	4 cut(s)	91, 313, 1155, 1645
AspS9I	GGNCC	4 cut(s)	99, 1104, 1165, 1240
AsuC2I	CCSGG	1 cut(s)	1244
AsuHPI	GGTGA	2 cut(s)	19, 292
AsuII	TTCGAA	2 cut(s)	496, 1159
AvaI	CYCGRG	2 cut(s)	503, 1479
AvaII	GGWCC	3 cut(s)	99, 1165, 1240
AxyI	CCTNAGG	1 cut(s)	659
BalI	TGGCCA	1 cut(s)	647
BanI	GGYRCC	1 cut(s)	443
BbrPI	CACGTG	1 cut(s)	992
BbsI	GAAGAC	2 cut(s)	26, 702
BbvI	GCAGC	3 cut(s)	165, 191, 973
BccI	CCATC	2 cut(s)	901, 1241
BceAI	ACGGC	1 cut(s)	945
BcgI	CGANNNNNNTGC	4 cut(s)	921, 955, 964, 998
BciT130I	CCWGG	4 cut(s)	269, 450, 644, 1008
BcnI	CCSGG	1 cut(s)	1244
BcoDI	GTCTC	4 cut(s)	128, 346, 918, 1124
BcuI	ACTAGT	1 cut(s)	766
BfaI	CTAG	5 cut(s)	203, 297, 767, 1229, 1508
BfmI	CTRYAG	1 cut(s)	151
BfoI	RGCGCY	1 cut(s)	92
BfuAI	ACCTGC	1 cut(s)	550
BisI	GCNGC	5 cut(s)	14, 41, 154, 180, 987
BlsI	GCNGC	5 cut(s)	15, 42, 155, 181, 988
Bme1390I	CCNGG	5 cut(s)	269, 450, 644, 1008, 1244
Bme18I	GGWCC	3 cut(s)	99, 1165, 1240
BmeT110I	CYCGRG	2 cut(s)	503, 1479
BmgT120I	GGNCC	4 cut(s)	99, 1104, 1165, 1240
BmiI	GGNNCC	5 cut(s)	427, 445, 551, 1166, 1167
BmrFI	CCNGG	5 cut(s)	269, 450, 644, 1008, 1244
BmrI	ACTGGG	1 cut(s)	850
BmsI	GCATC	6 cut(s)	781, 962, 1020, 1312, 1377, 1452
BmuI	ACTGGG	1 cut(s)	850
BpiI	GAAGAC	2 cut(s)	26, 702
BplI	GAGNNNNNCTC	2 cut(s)	417, 449
Bpu14I	TTCGAA	2 cut(s)	496, 1159
BpuEI	CTTGAG	1 cut(s)	857
BpuMI	CCSGG	1 cut(s)	1244
Bsa29I	ATCGAT	1 cut(s)	1014
BsaAI	YACGTR	1 cut(s)	992
BsaBI	GATNNNNATC	1 cut(s)	512
BsaJI	CCNNGG	7 cut(s)	30, 448, 648, 898, 1125, 1356, 1438
BsaWI	WCCGGW	3 cut(s)	96, 101, 121
Bsc4I	CCNNNNNNNGG	7 cut(s)	274, 453, 559, 649, 900, 1174, 1439
Bse118I	RCCGGY	1 cut(s)	96
Bse1I	ACTGG	3 cut(s)	190, 607, 845
Bse21I	CCTNAGG	1 cut(s)	659
Bse8I	GATNNNNATC	1 cut(s)	512
BseBI	CCWGG	4 cut(s)	269, 450, 644, 1008
BseCI	ATCGAT	1 cut(s)	1014
BseDI	CCNNGG	7 cut(s)	30, 448, 648, 898, 1125, 1356, 1438
BseGI	GGATG	2 cut(s)	169, 1209
BseJI	GATNNNNATC	1 cut(s)	512
BseLI	CCNNNNNNNGG	7 cut(s)	274, 453, 559, 649, 900, 1174, 1439
BseMII	CTCAG	3 cut(s)	84, 681, 1182
BseNI	ACTGG	3 cut(s)	190, 607, 845
BseXI	GCAGC	3 cut(s)	165, 191, 973
BsgI	GTGCAG	2 cut(s)	100, 972
Bsh1236I	CGCG	1 cut(s)	43
BshFI	GGCC	6 cut(s)	131, 527, 606, 647, 657, 1106
BshNI	GGYRCC	1 cut(s)	443
BshTI	ACCGGT	1 cut(s)	96
BshVI	ATCGAT	1 cut(s)	1014
BsiHKCI	CYCGRG	2 cut(s)	503, 1479
BsiSI	CCGG	4 cut(s)	97, 102, 122, 1243
BslFI	GGGAC	2 cut(s)	858, 1151
BslI	CCNNNNNNNGG	7 cut(s)	274, 453, 559, 649, 900, 1174, 1439
BsmAI	GTCTC	4 cut(s)	128, 346, 918, 1124
BsmBI	CGTCTC	1 cut(s)	128
BsmFI	GGGAC	2 cut(s)	858, 1151
BsmI	GAATGC	2 cut(s)	670, 1155
BsnI	GGCC	6 cut(s)	131, 527, 606, 647, 657, 1106
BsoBI	CYCGRG	2 cut(s)	503, 1479
Bsp119I	TTCGAA	2 cut(s)	496, 1159
Bsp143I	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
Bsp19I	CCATGG	2 cut(s)	898, 1356
BspACI	CCGC	5 cut(s)	14, 41, 65, 960, 1571
BspANI	GGCC	6 cut(s)	131, 527, 606, 647, 657, 1106
BspCNI	CTCAG	3 cut(s)	83, 682, 1183
BspDI	ATCGAT	1 cut(s)	1014
BspFNI	CGCG	1 cut(s)	43
BspHI	TCATGA	1 cut(s)	816
BspLI	GGNNCC	5 cut(s)	427, 445, 551, 1166, 1167
BspMAI	CTGCAG	1 cut(s)	155
BspMI	ACCTGC	1 cut(s)	550
BspPI	GGATC	4 cut(s)	133, 234, 918, 1028
BspT104I	TTCGAA	2 cut(s)	496, 1159
BspT107I	GGYRCC	1 cut(s)	443
BsrBI	CCGCTC	1 cut(s)	67
BsrFI	RCCGGY	1 cut(s)	96
BsrI	ACTGG	3 cut(s)	190, 607, 845
BssAI	RCCGGY	1 cut(s)	96
BssECI	CCNNGG	7 cut(s)	30, 448, 648, 898, 1125, 1356, 1438
BssMI	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
BssT1I	CCWWGG	6 cut(s)	30, 648, 898, 1125, 1356, 1438
Bst2UI	CCWGG	4 cut(s)	269, 450, 644, 1008
Bst6I	CTCTTC	1 cut(s)	1176
BstBAI	YACGTR	1 cut(s)	992
BstBI	TTCGAA	2 cut(s)	496, 1159
BstC8I	GCNNGC	2 cut(s)	584, 655
BstDEI	CTNAG	5 cut(s)	70, 517, 659, 690, 1191
BstDSI	CCRYGG	2 cut(s)	898, 1356
BstENI	CCTNNNNNAGG	2 cut(s)	647, 1437
BstF5I	GGATG	2 cut(s)	169, 1209
BstFNI	CGCG	1 cut(s)	43
BstH2I	RGCGCY	1 cut(s)	92
BstHHI	GCGC	4 cut(s)	91, 313, 1155, 1645
BstKTI	GATC	7 cut(s)	141, 242, 441, 751, 783, 913, 1036
BstMAI	GTCTC	4 cut(s)	128, 346, 918, 1124
BstMBI	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
BstMWI	GCNNNNNNNGC	3 cut(s)	310, 644, 1557
BstNI	CCWGG	4 cut(s)	269, 450, 644, 1008
BstNSI	RCATGY	1 cut(s)	825
BstSCI	CCNGG	5 cut(s)	267, 448, 642, 1006, 1242
BstSFI	CTRYAG	1 cut(s)	151
BstUI	CGCG	1 cut(s)	43
BstV1I	GCAGC	3 cut(s)	165, 191, 973
BstV2I	GAAGAC	2 cut(s)	26, 702
BstXI	CCANNNNNNTGG	1 cut(s)	1070
Bsu15I	ATCGAT	1 cut(s)	1014
Bsu36I	CCTNAGG	1 cut(s)	659
BsuRI	GGCC	6 cut(s)	131, 527, 606, 647, 657, 1106
BsuTUI	ATCGAT	1 cut(s)	1014
BtgI	CCRYGG	2 cut(s)	898, 1356
BtsCI	GGATG	2 cut(s)	169, 1209
BtsI	GCAGTG	2 cut(s)	1254, 1306
BtsIMutI	CAGTG	3 cut(s)	183, 1254, 1306
BveI	ACCTGC	1 cut(s)	550
Cac8I	GCNNGC	2 cut(s)	584, 655
CaiI	CAGNNNCTG	1 cut(s)	185
CciI	TCATGA	1 cut(s)	816
CfoI	GCGC	4 cut(s)	91, 313, 1155, 1645
Cfr10I	RCCGGY	1 cut(s)	96
Cfr13I	GGNCC	4 cut(s)	99, 1104, 1165, 1240
ClaI	ATCGAT	1 cut(s)	1014
CpoI	CGGWCCG	1 cut(s)	99
CseI	GACGC	2 cut(s)	185, 1581
CsiI	ACCWGGT	1 cut(s)	267
Csp6I	GTAC	1 cut(s)	851
CspAI	ACCGGT	1 cut(s)	96
CspI	CGGWCCG	1 cut(s)	99
CviAII	CATG	6 cut(s)	403, 817, 822, 899, 1150, 1357
CviQI	GTAC	1 cut(s)	851
DdeI	CTNAG	5 cut(s)	70, 517, 659, 690, 1191
DpnI	GATC	7 cut(s)	140, 241, 440, 750, 782, 912, 1035
DpnII	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
DraI	TTTAAA	1 cut(s)	735
EaeI	YGGCCR	1 cut(s)	645
Eam1104I	CTCTTC	1 cut(s)	1176
EarI	CTCTTC	1 cut(s)	1176
Eco130I	CCWWGG	6 cut(s)	30, 648, 898, 1125, 1356, 1438
Eco32I	GATATC	1 cut(s)	79
Eco47I	GGWCC	3 cut(s)	99, 1165, 1240
Eco57I	CTGAAG	2 cut(s)	1157, 1413
Eco72I	CACGTG	1 cut(s)	992
Eco81I	CCTNAGG	1 cut(s)	659
Eco88I	CYCGRG	2 cut(s)	503, 1479
EcoNI	CCTNNNNNAGG	2 cut(s)	647, 1437
EcoO109I	RGGNCCY	1 cut(s)	1165
EcoRII	CCWGG	4 cut(s)	267, 448, 642, 1006
EcoRV	GATATC	1 cut(s)	79
EcoT14I	CCWWGG	6 cut(s)	30, 648, 898, 1125, 1356, 1438
ErhI	CCWWGG	6 cut(s)	30, 648, 898, 1125, 1356, 1438
Esp3I	CGTCTC	1 cut(s)	128
FaeI	CATG	6 cut(s)	406, 820, 825, 902, 1153, 1360
FaqI	GGGAC	2 cut(s)	858, 1151
FatI	CATG	6 cut(s)	402, 816, 821, 898, 1149, 1356
FblI	GTMKAC	1 cut(s)	174
Fnu4HI	GCNGC	5 cut(s)	14, 41, 154, 180, 987
FokI	GGATG	2 cut(s)	176, 1196
Fsp4HI	GCNGC	5 cut(s)	14, 41, 154, 180, 987
FspAI	RTGCGCAY	1 cut(s)	1154
FspBI	CTAG	5 cut(s)	203, 297, 767, 1229, 1508
FspI	TGCGCA	1 cut(s)	1154
GlaI	GCGC	4 cut(s)	90, 312, 1154, 1644
GluI	GCNGC	5 cut(s)	14, 41, 154, 180, 987
HaeII	RGCGCY	1 cut(s)	92
HaeIII	GGCC	6 cut(s)	131, 527, 606, 647, 657, 1106
HapII	CCGG	4 cut(s)	97, 102, 122, 1243
HgaI	GACGC	2 cut(s)	185, 1581
HhaI	GCGC	4 cut(s)	91, 313, 1155, 1645
Hin1II	CATG	6 cut(s)	406, 820, 825, 902, 1153, 1360
Hin6I	GCGC	4 cut(s)	89, 311, 1153, 1643
HinP1I	GCGC	4 cut(s)	89, 311, 1153, 1643
HincII	GTYRAC	2 cut(s)	175, 1611
HindII	GTYRAC	2 cut(s)	175, 1611
HindIII	AAGCTT	1 cut(s)	800
HinfI	GANTC	5 cut(s)	5, 508, 692, 846, 1580
HpaI	GTTAAC	1 cut(s)	1611
HpaII	CCGG	4 cut(s)	97, 102, 122, 1243
HphI	GGTGA	2 cut(s)	19, 292
Hpy166II	GTNNAC	6 cut(s)	175, 361, 945, 995, 1226, 1611
Hpy188I	TCNGA	9 cut(s)	52, 73, 258, 463, 915, 1192, 1204, 1346, 1393
Hpy8I	GTNNAC	6 cut(s)	175, 361, 945, 995, 1226, 1611
Hpy99I	CGWCG	4 cut(s)	176, 179, 240, 1597
HpyAV	CCTTC	8 cut(s)	224, 229, 416, 447, 895, 977, 1155, 1252
HpyCH4IV	ACGT	6 cut(s)	595, 707, 991, 1020, 1222, 1448
HpyCH4V	TGCA	8 cut(s)	117, 153, 638, 772, 975, 989, 1082, 1528
HpyF10VI	GCNNNNNNNGC	3 cut(s)	310, 644, 1557
HpyF3I	CTNAG	5 cut(s)	70, 517, 659, 690, 1191
HpySE526I	ACGT	6 cut(s)	595, 707, 991, 1020, 1222, 1448
Hsp92II	CATG	6 cut(s)	406, 820, 825, 902, 1153, 1360
HspAI	GCGC	4 cut(s)	89, 311, 1153, 1643
KflI	GGGWCCC	1 cut(s)	1165
KspAI	GTTAAC	1 cut(s)	1611
Kzo9I	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
LmnI	GCTCC	4 cut(s)	425, 686, 1300, 1565
Lsp1109I	GCAGC	3 cut(s)	165, 191, 973
LweI	GCATC	6 cut(s)	781, 962, 1020, 1312, 1377, 1452
MabI	ACCWGGT	1 cut(s)	267
MaeI	CTAG	5 cut(s)	203, 297, 767, 1229, 1508
MaeII	ACGT	6 cut(s)	595, 707, 991, 1020, 1222, 1448
MalI	GATC	7 cut(s)	140, 241, 440, 750, 782, 912, 1035
MbiI	CCGCTC	1 cut(s)	67
MboI	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
MlsI	TGGCCA	1 cut(s)	647
MluCI	AATT	4 cut(s)	565, 861, 1410, 1663
MluNI	TGGCCA	1 cut(s)	647
MlyI	GAGTC	2 cut(s)	701, 840
MmeI	TCCRAC	4 cut(s)	267, 358, 1233, 1307
Mox20I	TGGCCA	1 cut(s)	647
MroXI	GAANNNNTTC	1 cut(s)	457
MscI	TGGCCA	1 cut(s)	647
MseI	TTAA	4 cut(s)	734, 1118, 1398, 1610
MslI	CAYNNNNRTG	1 cut(s)	162
Msp20I	TGGCCA	1 cut(s)	647
MspI	CCGG	4 cut(s)	97, 102, 122, 1243
MspR9I	CCNGG	5 cut(s)	269, 450, 644, 1008, 1244
Mva1269I	GAATGC	2 cut(s)	670, 1155
MvaI	CCWGG	4 cut(s)	269, 450, 644, 1008
MvnI	CGCG	1 cut(s)	43
MwoI	GCNNNNNNNGC	3 cut(s)	310, 644, 1557
NciI	CCSGG	1 cut(s)	1244
NcoI	CCATGG	2 cut(s)	898, 1356
NdeII	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
NlaIII	CATG	6 cut(s)	406, 820, 825, 902, 1153, 1360
NlaIV	GGNNCC	5 cut(s)	427, 445, 551, 1166, 1167
NmeAIII	GCCGAG	1 cut(s)	157
NsbI	TGCGCA	1 cut(s)	1154
NspI	RCATGY	1 cut(s)	825
NspV	TTCGAA	2 cut(s)	496, 1159
PaeR7I	CTCGAG	1 cut(s)	503
PagI	TCATGA	1 cut(s)	816
PciI	ACATGT	1 cut(s)	821
PctI	GAATGC	2 cut(s)	670, 1155
PdmI	GAANNNNTTC	1 cut(s)	457
PfeI	GAWTC	3 cut(s)	5, 508, 1580
PflMI	CCANNNNNTGG	1 cut(s)	274
PinAI	ACCGGT	1 cut(s)	96
PkrI	GCNGC	5 cut(s)	15, 42, 155, 181, 988
PleI	GAGTC	2 cut(s)	700, 840
PmaCI	CACGTG	1 cut(s)	992
PmlI	CACGTG	1 cut(s)	992
PpsI	GAGTC	2 cut(s)	700, 840
Ppu21I	YACGTR	1 cut(s)	992
PpuMI	RGGWCCY	1 cut(s)	1165
PscI	ACATGT	1 cut(s)	821
PsiI	TTATAA	1 cut(s)	1296
Psp5II	RGGWCCY	1 cut(s)	1165
Psp6I	CCWGG	4 cut(s)	267, 448, 642, 1006
PspCI	CACGTG	1 cut(s)	992
PspGI	CCWGG	4 cut(s)	267, 448, 642, 1006
PspN4I	GGNNCC	5 cut(s)	427, 445, 551, 1166, 1167
PspPI	GGNCC	4 cut(s)	99, 1104, 1165, 1240
PspPPI	RGGWCCY	1 cut(s)	1165
PstI	CTGCAG	1 cut(s)	155
PstNI	CAGNNNCTG	1 cut(s)	185
RsaI	GTAC	1 cut(s)	852
RsaNI	GTAC	1 cut(s)	851
RseI	CAYNNNNRTG	1 cut(s)	162
Rsr2I	CGGWCCG	1 cut(s)	99
RsrII	CGGWCCG	1 cut(s)	99
SalI	GTCGAC	1 cut(s)	173
SaqAI	TTAA	4 cut(s)	734, 1118, 1398, 1610
SatI	GCNGC	5 cut(s)	14, 41, 154, 180, 987
Sau3AI	GATC	7 cut(s)	138, 239, 438, 748, 780, 910, 1033
Sau96I	GGNCC	4 cut(s)	99, 1104, 1165, 1240
SchI	GAGTC	2 cut(s)	701, 840
ScrFI	CCNGG	5 cut(s)	269, 450, 644, 1008, 1244
SexAI	ACCWGGT	1 cut(s)	267
SfaNI	GCATC	6 cut(s)	781, 962, 1020, 1312, 1377, 1452
SfcI	CTRYAG	1 cut(s)	151
Sfr274I	CTCGAG	1 cut(s)	503
SfuI	TTCGAA	2 cut(s)	496, 1159
SgrDI	CGTCGACG	1 cut(s)	173
SinI	GGWCC	3 cut(s)	99, 1165, 1240
SlaI	CTCGAG	1 cut(s)	503
SmiMI	CAYNNNNRTG	1 cut(s)	162
SmlI	CTYRAG	2 cut(s)	503, 872
SmoI	CTYRAG	2 cut(s)	503, 872
SpeI	ACTAGT	1 cut(s)	766
Sse9I	AATT	4 cut(s)	565, 861, 1410, 1663
SsiI	CCGC	5 cut(s)	14, 41, 65, 960, 1571
SspMI	CTAG	5 cut(s)	203, 297, 767, 1229, 1508
StyD4I	CCNGG	5 cut(s)	267, 448, 642, 1006, 1242
StyI	CCWWGG	6 cut(s)	30, 648, 898, 1125, 1356, 1438
TaiI	ACGT	6 cut(s)	598, 710, 994, 1023, 1225, 1451
TasI	AATT	4 cut(s)	565, 861, 1410, 1663
TauI	GCSGC	2 cut(s)	16, 43
TfiI	GAWTC	3 cut(s)	5, 508, 1580
Tru1I	TTAA	4 cut(s)	734, 1118, 1398, 1610
Tru9I	TTAA	4 cut(s)	734, 1118, 1398, 1610
TscAI	CASTG	3 cut(s)	190, 1254, 1313
TseI	GCWGC	3 cut(s)	153, 179, 986
TspDTI	ATGAA	7 cut(s)	211, 419, 485, 805, 1138, 1665, 1676
TspGWI	ACGGA	2 cut(s)	224, 1277
TspRI	CASTG	3 cut(s)	190, 1254, 1313
Van91I	CCANNNNNTGG	1 cut(s)	274
VpaK11BI	GGWCC	3 cut(s)	99, 1165, 1240
XagI	CCTNNNNNAGG	2 cut(s)	647, 1437
XapI	RAATTY	2 cut(s)	861, 1663
XceI	RCATGY	1 cut(s)	825
XhoI	CTCGAG	1 cut(s)	503
XmiI	GTMKAC	1 cut(s)	174
XmnI	GAANNNNTTC	1 cut(s)	457
XspI	CTAG	5 cut(s)	203, 297, 767, 1229, 1508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.