Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0005347

Physical Location & Seq

Genomic Coordinates Reverse (-)

60500252 .. 60504151

Gene Structure 3900 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG371200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGACACCGCCTCCCCCTACCCCTGCGCCAACAGCGCGTTAAGCAACACGCGCTTCTCCGACCTGAAGCCTCCACTCTCCGAACCTGTCCTCCAAGCCCTAACCGAAGGCGGCTTCGACTTCTGCACTCCGGTTCAAGCCGCCACAATCCCCTTGCTATGCAGCTTCAAGGACGTCGCCGTCGACGCCGCCACCGGCTCCGGCAAAACCCTCGCCTTCGTCGTCCCACTCGTAGAGATCCTCCGCCGCGCTTCCACCAACCCGAAACCTCACCAGGTTATGGGGATGATTATATCTCCGACGAGAGAGCTGTCGTCGCAAATTTACAACGTGGCGAAGCCCTTCATTTCGACATTGCCGAATTTCAAGTGTGTGCTTTTGGTTGGGGGAGGGCAAGTGAAAGCAGACGTGAAGCTAATACAGGAGGAGGGAGCCAATTTGCTGATTGGCACACCAGGTAGATTGTATGACATTATGGAACGCATGGATAGCTTGGATTTGCGCAACTTTGAGATTTTGATCTTAGATGAGGCGGATAGGCTGTTGGATATGGGATTCCAAAAGCAGCTGACTGATATTATATCTCGCGTGCCAAAGCTTCGAAGAACTGGTCTTTTTTCAGCTACACAGACTGAGGCAGTTGAAGAGCTGGCCAGGGCGGGGTTGAGGAATCCTGTGAGGGTTGAAGTACGGGCGGAATCAAAATCAAATAAGGATTCAGCGTTGTCACAGCAATCTGCGTCATCCAAAACACCTTCTGGCCTTGCCATTGAGTATATGGAGTGTGAGGCAGACAAGAAGCCGTCGCAGCTTGTGGATATCCTTGTTAAGAATAAGTCTCACAAGACCATAGTGTACTTCATGACTTGTGCTTGTGTTGACTACTGGGGAGTTGTTCTTCCATGCCTTGCTCTGTTGAAGGATTTCAATCTGATTGCTCTCCATGGGAAGATGAAACAGACCGCAAGGGACAAAGCTCTAGCCTCATTTACATCTCTCTCAAGTGGCATCCTTCTATGCACTGATGTTGCAGCCCGTGGACTTGACATTCCGGGTGTTGACTGTATAGTGCAGTATGATACACCTCAAGATCCAAATGTTTTCGTGCATAGAGTTGGCAGAACAGCACGTATGGGTAGACAAGGAAGTGCAATTGTTTTCCTGTTACCAAAGGAGGAAGCTTATGTGGAATTCCTGCGGATAAGAAGAGTTCCTCTTCAAGAAAGGATATGTCCAGATGATGTCGCTGATGTTGTTCCACAGATACGATCTGCTGCAAAAAAAGACCGTGATATCATGGAAAAGGGCATGAGGGCTTTTGTTTCTTACATCCGTGCATATAAAGAACACCACTGCTCCTACATTTTCAGGTGGAAAGAACTTGAAATTGGGAAGTTGGGCATGGGATTTGGACTACTACAGCTCCCTGCAATGCCTGAGGTAAAGCACAACACACTTTCCACGGAGGGTTTCACCCCTGTTGCAGACATCAACTTGGAGGAGATCAAATATAAGGACAAATCTCGTGAGAAGCAAAGAAGGAAGAATCTGCTAGCAAAGGAGGCAAAAAAGCAAGAACCTAAACCTGAAAAAACAAAAAAAAACCCAAGTGCTAAAGCTAATGAGATGAAGAAGAAAACAGCTAAACAAAGACGTGCTGCGCAGACGGTTGAAGATGCAGATGAGTTGACTAGAGAATATCGCCTGCTGAAAAAGCTGAAAAAGGGGACTATCGATGAAACTGAGTTTGCCAAGTTGACAGGAACTGAGGACTTACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003727 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008187 GO:0008266 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

593

Amino Acids

66.08

Weight (kDa)

9.05

Isoelectric Point (pI)

42.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	43 - 216	5.2e-41	DEAD/DEAH box helicase
ResIII	PF04851	57 - 196	2.3e-06	Type III restriction enzyme, res subunit
Helicase_C	PF00271	267 - 379	2.5e-25	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	429 - 478	1e-18	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71280 AT1G71280 AT1G71370 AT5G05450
fragaria_vesca	FvH4_6g01590 FvH4_6g01590 FvH4_6g01590 FvH4_6g03480 FvH4_7g25130 FvH4_7g25130 FvH4_7g25130
malus_domestica	MD01G1158100.v1.1 MD07G1226800.v1.1
prunus_persica	Prupe.2G256400_v2.0.a1
pyrus_communis	pycom01g17480 pycom07g20540
rosa_chinensis	RchiOBHm_Chr1g0371021 RchiOBHm_Chr1g0371031
rosa_laevigata	RLG00000026991
rosa_multiflora	Rmu_co8450187.1_g000001 Rmu_sc0001018.1_g000027 Rmu_sc0003272.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286030
rosa_rugosa	Rorug01G0360900
rosa_samantha	Rh1AG371200 Rh1BG334700 Rh1CG348000 Rh1DG365900
rosa_wichuraiana	Rw1G032650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	179
AatII	GACGTC	1 cut(s)	177
Acc16I	TGCGCA	2 cut(s)	503, 1662
AccB7I	CCANNNNNTGG	1 cut(s)	280
AccI	GTMKAC	2 cut(s)	183, 1138
AccII	CGCG	4 cut(s)	38, 52, 249, 588
AclWI	GGATC	2 cut(s)	232, 1085
AcoI	YGGCCR	1 cut(s)	651
AcsI	RAATTY	3 cut(s)	321, 361, 1190
AcuI	CTGAAG	1 cut(s)	86
AcyI	GRCGYC	2 cut(s)	174, 186
AfaI	GTAC	2 cut(s)	690, 857
AfiI	CCNNNNNNNGG	2 cut(s)	280, 660
AjiI	CACGTC	2 cut(s)	409, 1655
AjnI	CCWGG	3 cut(s)	273, 454, 653
AjuI	GAANNNNNNNTTGG	2 cut(s)	1371, 1403
AloI	GAACNNNNNNTCC	2 cut(s)	75, 107
Alw26I	GTCTC	1 cut(s)	843
AlwI	GGATC	2 cut(s)	232, 1085
AlwNI	CAGNNNCTG	1 cut(s)	1766
AoxI	GGCC	2 cut(s)	651, 760
ApeKI	GCWGC	6 cut(s)	162, 565, 808, 1031, 1274, 1658
ApoI	RAATTY	3 cut(s)	321, 361, 1190
ArsI	GACNNNNNNTTYG	2 cut(s)	595, 627
Asp700I	GAANNNNTTC	2 cut(s)	341, 923
AspLEI	GCGC	6 cut(s)	29, 38, 54, 251, 504, 1663
AsuC2I	CCSGG	1 cut(s)	1053
AsuHPI	GGTGA	2 cut(s)	263, 1465
AsuII	TTCGAA	1 cut(s)	601
AsuNHI	GCTAGC	1 cut(s)	1552
AxyI	CCTNAGG	1 cut(s)	1437
BalI	TGGCCA	1 cut(s)	653
BauI	CACGAG	1 cut(s)	1524
BbvI	GCAGC	6 cut(s)	174, 577, 820, 1043, 1261, 1645
BceAI	ACGGC	2 cut(s)	164, 787
BcgI	CGANNNNNNTGC	2 cut(s)	193, 227
BciT130I	CCWGG	3 cut(s)	275, 456, 655
BcnI	CCSGG	1 cut(s)	1053
BcoDI	GTCTC	1 cut(s)	843
BfaI	CTAG	3 cut(s)	980, 1553, 1692
BfmI	CTRYAG	1 cut(s)	1418
Bme1390I	CCNGG	4 cut(s)	275, 456, 655, 1053
BmgBI	CACGTC	2 cut(s)	409, 1655
BmiI	GGNNCC	2 cut(s)	199, 433
BmrFI	CCNGG	4 cut(s)	275, 456, 655, 1053
BmrI	ACTGGG	1 cut(s)	895
BmsI	GCATC	2 cut(s)	1017, 1666
BmtI	GCTAGC	1 cut(s)	1556
BmuI	ACTGGG	1 cut(s)	895
Bpu14I	TTCGAA	1 cut(s)	601
BpuEI	CTTGAG	2 cut(s)	985, 1071
BpuMI	CCSGG	1 cut(s)	1053
Bsa29I	ATCGAT	1 cut(s)	1734
BsaAI	YACGTR	1 cut(s)	1130
BsaBI	GATNNNNATC	2 cut(s)	518, 927
BsaHI	GRCGYC	2 cut(s)	174, 186
BsaJI	CCNNGG	4 cut(s)	654, 943, 1036, 1461
BsaWI	WCCGGW	1 cut(s)	130
BsaXI	ACNNNNNCTCC	9 cut(s)	26, 75, 105, 381, 411, 1340, 1370, 1407, 1437
Bsc4I	CCNNNNNNNGG	2 cut(s)	280, 660
Bse118I	RCCGGY	1 cut(s)	194
Bse1I	ACTGG	2 cut(s)	613, 890
Bse21I	CCTNAGG	1 cut(s)	1437
Bse3DI	GCAATG	2 cut(s)	353, 1437
Bse8I	GATNNNNATC	2 cut(s)	518, 927
BseBI	CCWGG	3 cut(s)	275, 456, 655
BseCI	ATCGAT	1 cut(s)	1734
BseDI	CCNNGG	4 cut(s)	654, 943, 1036, 1461
BseGI	GGATG	4 cut(s)	291, 743, 1008, 1329
BseJI	GATNNNNATC	2 cut(s)	518, 927
BseLI	CCNNNNNNNGG	2 cut(s)	280, 660
BseMI	GCAATG	2 cut(s)	353, 1437
BseMII	CTCAG	4 cut(s)	624, 1428, 1734, 1758
BseNI	ACTGG	2 cut(s)	613, 890
BseRI	GAGGAG	2 cut(s)	440, 1514
BseXI	GCAGC	6 cut(s)	174, 577, 820, 1043, 1261, 1645
BsgI	GTGCAG	2 cut(s)	109, 1091
Bsh1236I	CGCG	4 cut(s)	38, 52, 249, 588
BshFI	GGCC	2 cut(s)	653, 762
BshVI	ATCGAT	1 cut(s)	1734
BsiSI	CCGG	4 cut(s)	131, 195, 201, 1052
BslFI	GGGAC	3 cut(s)	209, 983, 1741
BslI	CCNNNNNNNGG	2 cut(s)	280, 660
BsmAI	GTCTC	1 cut(s)	843
BsmFI	GGGAC	3 cut(s)	209, 983, 1741
BsnI	GGCC	2 cut(s)	653, 762
Bsp119I	TTCGAA	1 cut(s)	601
Bsp143I	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
Bsp19I	CCATGG	1 cut(s)	943
BspANI	GGCC	2 cut(s)	653, 762
BspCNI	CTCAG	4 cut(s)	625, 1429, 1735, 1759
BspDI	ATCGAT	1 cut(s)	1734
BspFNI	CGCG	4 cut(s)	38, 52, 249, 588
BspHI	TCATGA	1 cut(s)	861
BspLI	GGNNCC	2 cut(s)	199, 433
BspOI	GCTAGC	1 cut(s)	1556
BspPI	GGATC	2 cut(s)	232, 1085
BspQI	GCTCTTC	1 cut(s)	639
BspT104I	TTCGAA	1 cut(s)	601
BsrDI	GCAATG	2 cut(s)	353, 1437
BsrFI	RCCGGY	1 cut(s)	194
BsrI	ACTGG	2 cut(s)	613, 890
BssAI	RCCGGY	1 cut(s)	194
BssECI	CCNNGG	4 cut(s)	654, 943, 1036, 1461
BssMI	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
BssNI	GRCGYC	2 cut(s)	174, 186
BssSI	CACGAG	1 cut(s)	1524
BssT1I	CCWWGG	1 cut(s)	943
Bst2BI	CACGAG	1 cut(s)	1524
Bst2UI	CCWGG	3 cut(s)	275, 456, 655
Bst4CI	ACNGT	3 cut(s)	1064, 1289, 1669
Bst6I	CTCTTC	3 cut(s)	639, 1201, 1221
BstACI	GRCGYC	2 cut(s)	174, 186
BstBAI	YACGTR	1 cut(s)	1130
BstBI	TTCGAA	1 cut(s)	601
BstC8I	GCNNGC	4 cut(s)	590, 651, 1554, 1706
BstDEI	CTNAG	5 cut(s)	523, 633, 1437, 1743, 1767
BstDSI	CCRYGG	3 cut(s)	943, 1036, 1461
BstF5I	GGATG	4 cut(s)	291, 743, 1008, 1329
BstFNI	CGCG	4 cut(s)	38, 52, 249, 588
BstHHI	GCGC	6 cut(s)	29, 38, 54, 251, 504, 1663
BstKTI	GATC	5 cut(s)	240, 522, 1093, 1271, 1506
BstMAI	GTCTC	1 cut(s)	843
BstMBI	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
BstNI	CCWGG	3 cut(s)	275, 456, 655
BstSCI	CCNGG	4 cut(s)	273, 454, 653, 1051
BstSFI	CTRYAG	1 cut(s)	1418
BstUI	CGCG	4 cut(s)	38, 52, 249, 588
BstV1I	GCAGC	6 cut(s)	174, 577, 820, 1043, 1261, 1645
BstX2I	RGATCY	2 cut(s)	237, 1090
BstYI	RGATCY	2 cut(s)	237, 1090
Bsu15I	ATCGAT	1 cut(s)	1734
Bsu36I	CCTNAGG	1 cut(s)	1437
BsuRI	GGCC	2 cut(s)	653, 762
BsuTUI	ATCGAT	1 cut(s)	1734
BtgI	CCRYGG	3 cut(s)	943, 1036, 1461
BtrI	CACGTC	2 cut(s)	409, 1655
BtsCI	GGATG	4 cut(s)	291, 743, 1008, 1329
BtsI	GCAGTG	1 cut(s)	1351
BtsIMutI	CAGTG	2 cut(s)	1020, 1351
Cac8I	GCNNGC	4 cut(s)	590, 651, 1554, 1706
CaiI	CAGNNNCTG	1 cut(s)	1766
CciI	TCATGA	1 cut(s)	861
CfoI	GCGC	6 cut(s)	29, 38, 54, 251, 504, 1663
Cfr10I	RCCGGY	1 cut(s)	194
ClaI	ATCGAT	1 cut(s)	1734
CseI	GACGC	2 cut(s)	194, 729
CsiI	ACCWGGT	2 cut(s)	273, 454
Csp6I	GTAC	2 cut(s)	689, 856
CviAII	CATG	7 cut(s)	484, 862, 903, 944, 1297, 1309, 1402
CviQI	GTAC	2 cut(s)	689, 856
DdeI	CTNAG	5 cut(s)	523, 633, 1437, 1743, 1767
DpnI	GATC	5 cut(s)	239, 521, 1092, 1270, 1505
DpnII	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
DrdI	GACNNNNNNGTC	1 cut(s)	179
DseDI	GACNNNNNNGTC	1 cut(s)	179
EaeI	YGGCCR	1 cut(s)	651
Eam1104I	CTCTTC	3 cut(s)	639, 1201, 1221
EarI	CTCTTC	3 cut(s)	639, 1201, 1221
EciI	GGCGGA	3 cut(s)	233, 548, 710
Eco130I	CCWWGG	1 cut(s)	943
Eco32I	GATATC	2 cut(s)	820, 1294
Eco57I	CTGAAG	1 cut(s)	86
Eco81I	CCTNAGG	1 cut(s)	1437
EcoRI	GAATTC	1 cut(s)	1190
EcoRII	CCWGG	3 cut(s)	273, 454, 653
EcoRV	GATATC	2 cut(s)	820, 1294
EcoT14I	CCWWGG	1 cut(s)	943
ErhI	CCWWGG	1 cut(s)	943
FaeI	CATG	7 cut(s)	487, 865, 906, 947, 1300, 1312, 1405
FaqI	GGGAC	3 cut(s)	209, 983, 1741
FatI	CATG	7 cut(s)	483, 861, 902, 943, 1296, 1308, 1401
FauI	CCCGC	1 cut(s)	652
FblI	GTMKAC	2 cut(s)	183, 1138
FokI	GGATG	4 cut(s)	298, 730, 995, 1316
FspBI	CTAG	3 cut(s)	980, 1553, 1692
FspI	TGCGCA	2 cut(s)	503, 1662
GlaI	GCGC	6 cut(s)	28, 37, 53, 250, 503, 1662
HaeIII	GGCC	2 cut(s)	653, 762
HapII	CCGG	4 cut(s)	131, 195, 201, 1052
HgaI	GACGC	2 cut(s)	194, 729
HhaI	GCGC	6 cut(s)	29, 38, 54, 251, 504, 1663
Hin1I	GRCGYC	2 cut(s)	174, 186
Hin1II	CATG	7 cut(s)	487, 865, 906, 947, 1300, 1312, 1405
Hin6I	GCGC	6 cut(s)	27, 36, 52, 249, 502, 1661
HinP1I	GCGC	6 cut(s)	27, 36, 52, 249, 502, 1661
HincII	GTYRAC	5 cut(s)	184, 880, 1060, 1689, 1758
HindII	GTYRAC	5 cut(s)	184, 880, 1060, 1689, 1758
HindIII	AAGCTT	2 cut(s)	596, 1179
HinfI	GANTC	5 cut(s)	555, 670, 698, 716, 1546
HpaII	CCGG	4 cut(s)	131, 195, 201, 1052
HphI	GGTGA	2 cut(s)	263, 1465
Hpy166II	GTNNAC	8 cut(s)	184, 856, 880, 1040, 1060, 1139, 1689, 1758
Hpy188I	TCNGA	4 cut(s)	61, 82, 300, 933
Hpy188III	TCNNGA	5 cut(s)	862, 1088, 1220, 1235, 1526
Hpy8I	GTNNAC	8 cut(s)	184, 856, 880, 1040, 1060, 1139, 1689, 1758
Hpy99I	CGWCG	7 cut(s)	179, 185, 188, 224, 304, 319, 808
HpyAV	CCTTC	7 cut(s)	101, 226, 352, 765, 913, 1022, 1533
HpyCH4III	ACNGT	3 cut(s)	1064, 1289, 1669
HpyCH4IV	ACGT	5 cut(s)	174, 330, 408, 1129, 1654
HpyF3I	CTNAG	5 cut(s)	523, 633, 1437, 1743, 1767
HpySE526I	ACGT	5 cut(s)	174, 330, 408, 1129, 1654
Hsp92I	GRCGYC	2 cut(s)	174, 186
Hsp92II	CATG	7 cut(s)	487, 865, 906, 947, 1300, 1312, 1405
HspAI	GCGC	6 cut(s)	27, 36, 52, 249, 502, 1661
Kzo9I	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
LguI	GCTCTTC	1 cut(s)	639
LmnI	GCTCC	4 cut(s)	203, 431, 1361, 1428
Lsp1109I	GCAGC	6 cut(s)	174, 577, 820, 1043, 1261, 1645
LweI	GCATC	2 cut(s)	1017, 1666
MabI	ACCWGGT	2 cut(s)	273, 454
MaeI	CTAG	3 cut(s)	980, 1553, 1692
MaeII	ACGT	5 cut(s)	174, 330, 408, 1129, 1654
MaeIII	GTNAC	2 cut(s)	726, 1164
MalI	GATC	5 cut(s)	239, 521, 1092, 1270, 1505
MboI	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	2 cut(s)	237, 1090
MlsI	TGGCCA	1 cut(s)	653
MluCI	AATT	6 cut(s)	321, 361, 436, 1152, 1190, 1386
MluNI	TGGCCA	1 cut(s)	653
MmeI	TCCRAC	3 cut(s)	84, 323, 525
Mox20I	TGGCCA	1 cut(s)	653
MroXI	GAANNNNTTC	2 cut(s)	341, 923
MscI	TGGCCA	1 cut(s)	653
MseI	TTAA	2 cut(s)	41, 828
Msp20I	TGGCCA	1 cut(s)	653
MspA1I	CMGCKG	1 cut(s)	568
MspI	CCGG	4 cut(s)	131, 195, 201, 1052
MspR9I	CCNGG	4 cut(s)	275, 456, 655, 1053
MunI	CAATTG	1 cut(s)	1152
MvaI	CCWGG	3 cut(s)	275, 456, 655
MvnI	CGCG	4 cut(s)	38, 52, 249, 588
NciI	CCSGG	1 cut(s)	1053
NcoI	CCATGG	1 cut(s)	943
NdeII	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
NheI	GCTAGC	1 cut(s)	1552
NlaIII	CATG	7 cut(s)	487, 865, 906, 947, 1300, 1312, 1405
NlaIV	GGNNCC	2 cut(s)	199, 433
NmuCI	GTSAC	1 cut(s)	726
NsbI	TGCGCA	2 cut(s)	503, 1662
NspV	TTCGAA	1 cut(s)	601
PagI	TCATGA	1 cut(s)	861
PciSI	GCTCTTC	1 cut(s)	639
PcsI	WCGNNNNNNNCGW	4 cut(s)	180, 219, 228, 356
PdmI	GAANNNNTTC	2 cut(s)	341, 923
PfeI	GAWTC	5 cut(s)	555, 670, 698, 716, 1546
PflMI	CCANNNNNTGG	1 cut(s)	280
Ppu21I	YACGTR	1 cut(s)	1130
Psp6I	CCWGG	3 cut(s)	273, 454, 653
PspGI	CCWGG	3 cut(s)	273, 454, 653
PspN4I	GGNNCC	2 cut(s)	199, 433
PstNI	CAGNNNCTG	1 cut(s)	1766
PsuI	RGATCY	2 cut(s)	237, 1090
PvuII	CAGCTG	1 cut(s)	568
RsaI	GTAC	2 cut(s)	690, 857
RsaNI	GTAC	2 cut(s)	689, 856
SalI	GTCGAC	1 cut(s)	182
SapI	GCTCTTC	1 cut(s)	639
SaqAI	TTAA	2 cut(s)	41, 828
Sau3AI	GATC	5 cut(s)	237, 519, 1090, 1268, 1503
ScrFI	CCNGG	4 cut(s)	275, 456, 655, 1053
SexAI	ACCWGGT	2 cut(s)	273, 454
SfaNI	GCATC	2 cut(s)	1017, 1666
SfcI	CTRYAG	1 cut(s)	1418
SfuI	TTCGAA	1 cut(s)	601
SgrDI	CGTCGACG	1 cut(s)	182
SmlI	CTYRAG	2 cut(s)	1000, 1086
SmoI	CTYRAG	2 cut(s)	1000, 1086
Sse9I	AATT	6 cut(s)	321, 361, 436, 1152, 1190, 1386
SspMI	CTAG	3 cut(s)	980, 1553, 1692
StyD4I	CCNGG	4 cut(s)	273, 454, 653, 1051
StyI	CCWWGG	1 cut(s)	943
TaaI	ACNGT	3 cut(s)	1064, 1289, 1669
TaiI	ACGT	5 cut(s)	177, 333, 411, 1132, 1657
TaqI	TCGA	5 cut(s)	117, 183, 350, 601, 1734
TasI	AATT	6 cut(s)	321, 361, 436, 1152, 1190, 1386
TatI	WGTACW	1 cut(s)	855
TauI	GCSGC	4 cut(s)	114, 143, 191, 249
TfiI	GAWTC	5 cut(s)	555, 670, 698, 716, 1546
Tru1I	TTAA	2 cut(s)	41, 828
Tru9I	TTAA	2 cut(s)	41, 828
TscAI	CASTG	2 cut(s)	1027, 1358
TseFI	GTSAC	1 cut(s)	726
TseI	GCWGC	6 cut(s)	162, 565, 808, 1031, 1274, 1658
Tsp45I	GTSAC	1 cut(s)	726
TspDTI	ATGAA	5 cut(s)	334, 850, 968, 1643, 1752
TspGWI	ACGGA	2 cut(s)	1322, 1478
TspRI	CASTG	2 cut(s)	1027, 1358
Van91I	CCANNNNNTGG	1 cut(s)	280
XapI	RAATTY	3 cut(s)	321, 361, 1190
XcmI	CCANNNNNNNNNTGG	1 cut(s)	775
XmiI	GTMKAC	2 cut(s)	183, 1138
XmnI	GAANNNNTTC	2 cut(s)	341, 923
XspI	CTAG	3 cut(s)	980, 1553, 1692
ZraI	GACGTC	1 cut(s)	175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.