Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005347

Physical Location & Seq

Genomic Coordinates Forward (+)

1611737 .. 1615387

Gene Structure 3651 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G05450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGATTCATCGGCGAACATAAACAAAGCTCTAACGGAGACGCGTTTCTCCGACCTCGAACCTCCACTCTCCGGAGATATCATTGAGGCTCTTAATCAGTCTGATTTCGAGTTCTGCACTCCGGTTCAAGCCGCGACGATCCCTTTACTCTGTAGTTACAAGGATGTTGCCGTCGACGCTGCCACTGGTTCTGGAAAAACCCTAGCTTTCGTCGTTCCCCTCGTAGAAATCCTCCGTCGATCCACCTCATTCCCTCCGAAGCCTCACCAGGTCATGGGGGTGATTATATCGCCAACGAGAGAGCTATCAACGCAGATATATAATGTCGCACAACCATTTGTTTCGACTTTGGCAAATGTGAACTCTGTGTTGCTTGTTGGAGGCCGAGAGGTGAAAGCTGACATGAAGATTATTGAAGAAGAAGGATGCAATGTCTTGATTGGTACACCTGGAAGACTTTCTGATATTATGGAACGAATGGAGATTCTGGATTTTCGAAATCTTGAGATTCTTATTCTAGATGAGGCAGATAGGCTTTTGGAGATGGGGTTCCAAAGGCAGGTGAATTACATTATCTCACGCTTGCCAAAGCAGAGGAGGACTGGCCTCTTTTCAGCTACACAAACAGAGGGCGTTGAAGAGCTCGCCAAGGCTGGGCTTAGGAACCCTGTGAGAGTTGAAGTTCGAGCTAAGTCGAAGTCGGAATCATCCCAGCAATTGACAAACTCGAAAACCCCTTCTGGTCTTCATCTTGAGTATATGGAATGCGAAGCAGATAAAAAATCATCACAACTAGTTGATCTCCTCATCAAGAACAGTGATAAAAAGCTTATAGTATTCTTCATGACCTGTGCTTCTGTTGACTACTGGGGACTCGTACTTTCAAAAATTCCTGCCCTGAAGTCCATATCTTTAATTCCTATCCATGGGGATATGAAGCAGAATGCAAGAGACAAGGCATTAGCTTCGTTTACTAAAGCATCAAGTGGTGCCCTTCTGTGCACAGACGTTGCTGCACGTGGACTTGATATTCCAGGCATTGATTATGTTGTTCAGTATGATCCCCCACAAGACCCAAATATGTTCAACCACAGGGCCGGCAGAACTGCAAGATTAGGAAGACAAGGGAGGGCCATTGTGTTTTTACTGCCCAAGGAAGAAGCCTATGTAGAGTTTATGCGCATAAGAAGAGTCCCTTTGGAAGAGAGAAAATGCTCTGAGGACGCATCCGATGTCATCCCGATTATACGTTCAGCTGCCATGAAGGACCGAGCAGTGATGGAGAAGGGATTAAAGGCATTTGTTTCCTTTGTCCGTGCTTATAAGGAGCATCACTGCTCTTTCATTTTCAGATGGAAAGACCTTGAGATTGGAAAGTTAGCCATGGGATATGGCCTCTTGTATCTTCCTTCAATGTCTGAAGTTAAACAACACAGACTTTCCAGTGAGGGTTTCACACCAGTTGAAGGTGTCAAGTTTGAAGAAATAAAATTCAAGGACAAATATCGGGAGAAACAAAGACAGCAAAACTTACAAGTAAGGAAAGAGAAACGGCAAGAAGAGAAAAAAGAGAAAGGCAAGAGAAAAAGGGTTGATGCTTCTGCTAGTAATGATCCTAAGAAAGCGTCGAGAAAGTTAACGGGGAAACAAAGACAAACTATTCAAACTGCTGAAGATGAAGAAGTGATGGATCGAGATTATAAGTTGATGATAAAAGTAAAGAAAGGGTTAATTAAAGAAGATGAATATGAAAGACTTACAGGAGATGATGATTTATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003727 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008187 GO:0008266 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

593

Amino Acids

66.94

Weight (kDa)

8.88

Isoelectric Point (pI)

41.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	40 - 214	2.1e-42	DEAD/DEAH box helicase
Helicase_C	PF00271	261 - 373	3.3e-26	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	423 - 472	1.7e-17	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71280 AT1G71280 AT1G71370 AT5G05450
fragaria_vesca	FvH4_6g01590 FvH4_6g01590 FvH4_6g01590 FvH4_6g03480 FvH4_7g25130 FvH4_7g25130 FvH4_7g25130
malus_domestica	MD01G1158100.v1.1 MD07G1226800.v1.1
prunus_persica	Prupe.2G256400_v2.0.a1
pyrus_communis	pycom01g17480 pycom07g20540
rosa_chinensis	RchiOBHm_Chr1g0371021 RchiOBHm_Chr1g0371031
rosa_laevigata	RLG00000026991
rosa_multiflora	Rmu_co8450187.1_g000001 Rmu_sc0001018.1_g000027 Rmu_sc0003272.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286030
rosa_rugosa	Rorug01G0360900
rosa_samantha	Rh1AG371200 Rh1BG334700 Rh1CG348000 Rh1DG365900
rosa_wichuraiana	Rw1G032650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1323, 1701
AarI	CACCTGC	1 cut(s)	550
Acc16I	TGCGCA	1 cut(s)	1181
Acc36I	ACCTGC	1 cut(s)	550
AccB1I	GGYRCC	1 cut(s)	989
AccB7I	CCANNNNNTGG	1 cut(s)	274
AccI	GTMKAC	1 cut(s)	174
AccII	CGCG	2 cut(s)	43, 134
AccIII	TCCGGA	1 cut(s)	71
AciI	CCGC	1 cut(s)	132
AclWI	GGATC	5 cut(s)	133, 234, 1055, 1607, 1698
AcsI	RAATTY	2 cut(s)	888, 1490
AcuI	CTGAAG	3 cut(s)	920, 1440, 1692
AcvI	CACGTG	1 cut(s)	1019
AfaI	GTAC	2 cut(s)	445, 879
AfiI	CCNNNNNNNGG	6 cut(s)	71, 274, 559, 654, 926, 1466
AflIII	ACRYGT	1 cut(s)	41
AhlI	ACTAGT	1 cut(s)	793
AjnI	CCWGG	3 cut(s)	267, 448, 1033
AloI	GAACNNNNNNTCC	2 cut(s)	533, 565
Alw21I	GWGCWC	2 cut(s)	645, 1004
Alw26I	GTCTC	2 cut(s)	32, 945
Alw44I	GTGCAC	1 cut(s)	1000
AlwI	GGATC	5 cut(s)	133, 234, 1055, 1607, 1698
Aor13HI	TCCGGA	1 cut(s)	71
AoxI	GGCC	5 cut(s)	382, 604, 1095, 1131, 1393
ApaLI	GTGCAC	1 cut(s)	1000
ApeKI	GCWGC	3 cut(s)	179, 1013, 1256
ApoI	RAATTY	2 cut(s)	888, 1490
Asp700I	GAANNNNTTC	1 cut(s)	457
AspLEI	GCGC	1 cut(s)	1182
AspS9I	GGNCC	3 cut(s)	1095, 1131, 1267
AsuHPI	GGTGA	4 cut(s)	257, 292, 403, 574
AsuII	TTCGAA	1 cut(s)	496
AvaII	GGWCC	1 cut(s)	1267
BaeGI	GKGCMC	2 cut(s)	994, 1004
BanI	GGYRCC	1 cut(s)	989
BanII	GRGCYC	1 cut(s)	645
BbrPI	CACGTG	1 cut(s)	1019
BbsI	GAAGAC	3 cut(s)	460, 737, 1126
Bbv12I	GWGCWC	2 cut(s)	645, 1004
BbvI	GCAGC	3 cut(s)	166, 1000, 1243
BccI	CCATC	4 cut(s)	538, 1273, 1347, 1681
BceAI	ACGGC	2 cut(s)	155, 1568
BcgI	CGANNNNNNTGC	2 cut(s)	948, 982
BciT130I	CCWGG	3 cut(s)	269, 450, 1035
BcoDI	GTCTC	2 cut(s)	32, 945
BcuI	ACTAGT	1 cut(s)	793
BfaI	CTAG	4 cut(s)	203, 518, 794, 1605
BfmI	CTRYAG	1 cut(s)	151
BfuAI	ACCTGC	1 cut(s)	550
BisI	GCNGC	4 cut(s)	132, 180, 1014, 1257
BlsI	GCNGC	4 cut(s)	133, 181, 1015, 1258
Bme1390I	CCNGG	3 cut(s)	269, 450, 1035
Bme18I	GGWCC	1 cut(s)	1267
BmgT120I	GGNCC	3 cut(s)	1095, 1131, 1267
BmiI	GGNNCC	3 cut(s)	551, 665, 991
BmrFI	CCNGG	3 cut(s)	269, 450, 1035
BmrI	ACTGGG	1 cut(s)	877
BmsI	GCATC	5 cut(s)	416, 989, 1235, 1339, 1585
BmuI	ACTGGG	1 cut(s)	877
BpiI	GAAGAC	3 cut(s)	460, 737, 1126
Bpu10I	CCTNAGC	1 cut(s)	659
Bpu14I	TTCGAA	1 cut(s)	496
BpuEI	CTTGAG	3 cut(s)	524, 773, 1385
BsaAI	YACGTR	1 cut(s)	1019
BsaJI	CCNNGG	4 cut(s)	648, 925, 1152, 1383
BsaWI	WCCGGW	2 cut(s)	71, 121
BsaXI	ACNNNNNCTCC	2 cut(s)	533, 563
Bsc4I	CCNNNNNNNGG	6 cut(s)	71, 274, 559, 654, 926, 1466
Bse118I	RCCGGY	1 cut(s)	1097
Bse1I	ACTGG	5 cut(s)	190, 607, 872, 1443, 1460
Bse3DI	GCAATG	1 cut(s)	436
BseAI	TCCGGA	1 cut(s)	71
BseBI	CCWGG	3 cut(s)	269, 450, 1035
BseDI	CCNNGG	4 cut(s)	648, 925, 1152, 1383
BseGI	GGATG	5 cut(s)	169, 431, 707, 1226, 1236
BseLI	CCNNNNNNNGG	6 cut(s)	71, 274, 559, 654, 926, 1466
BseMI	GCAATG	1 cut(s)	436
BseMII	CTCAG	1 cut(s)	1209
BseNI	ACTGG	5 cut(s)	190, 607, 872, 1443, 1460
BseRI	GAGGAG	2 cut(s)	610, 794
BseSI	GKGCMC	2 cut(s)	994, 1004
BseXI	GCAGC	3 cut(s)	166, 1000, 1243
BseYI	CCCAGC	2 cut(s)	653, 711
BsgI	GTGCAG	2 cut(s)	100, 999
Bsh1236I	CGCG	2 cut(s)	43, 134
BshFI	GGCC	5 cut(s)	384, 606, 1097, 1133, 1395
BshNI	GGYRCC	1 cut(s)	989
BsiHKAI	GWGCWC	2 cut(s)	645, 1004
BsiSI	CCGG	3 cut(s)	72, 122, 1098
BslFI	GGGAC	2 cut(s)	885, 1178
BslI	CCNNNNNNNGG	6 cut(s)	71, 274, 559, 654, 926, 1466
BsmAI	GTCTC	2 cut(s)	32, 945
BsmBI	CGTCTC	1 cut(s)	32
BsmFI	GGGAC	2 cut(s)	885, 1178
BsmI	GAATGC	2 cut(s)	770, 949
BsnI	GGCC	5 cut(s)	384, 606, 1097, 1133, 1395
Bsp119I	TTCGAA	1 cut(s)	496
Bsp1286I	GDGCHC	3 cut(s)	645, 994, 1004
Bsp13I	TCCGGA	1 cut(s)	71
Bsp143I	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
Bsp19I	CCATGG	2 cut(s)	925, 1383
BspACI	CCGC	1 cut(s)	132
BspANI	GGCC	5 cut(s)	384, 606, 1097, 1133, 1395
BspCNI	CTCAG	1 cut(s)	1210
BspEI	TCCGGA	1 cut(s)	71
BspFNI	CGCG	2 cut(s)	43, 134
BspHI	TCATGA	1 cut(s)	843
BspLI	GGNNCC	3 cut(s)	551, 665, 991
BspMI	ACCTGC	1 cut(s)	550
BspPI	GGATC	5 cut(s)	133, 234, 1055, 1607, 1698
BspQI	GCTCTTC	1 cut(s)	633
BspT104I	TTCGAA	1 cut(s)	496
BspT107I	GGYRCC	1 cut(s)	989
BsrDI	GCAATG	1 cut(s)	436
BsrFI	RCCGGY	1 cut(s)	1097
BsrI	ACTGG	5 cut(s)	190, 607, 872, 1443, 1460
BssAI	RCCGGY	1 cut(s)	1097
BssECI	CCNNGG	4 cut(s)	648, 925, 1152, 1383
BssMI	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
BssT1I	CCWWGG	4 cut(s)	648, 925, 1152, 1383
Bst2UI	CCWGG	3 cut(s)	269, 450, 1035
Bst4CI	ACNGT	1 cut(s)	818
Bst6I	CTCTTC	4 cut(s)	633, 1183, 1197, 1554
BstBAI	YACGTR	1 cut(s)	1019
BstBI	TTCGAA	1 cut(s)	496
BstC8I	GCNNGC	3 cut(s)	584, 645, 1099
BstDEI	CTNAG	4 cut(s)	659, 690, 1218, 1617
BstDSI	CCRYGG	2 cut(s)	925, 1383
BstF5I	GGATG	5 cut(s)	169, 431, 707, 1226, 1236
BstFNI	CGCG	2 cut(s)	43, 134
BstHHI	GCGC	1 cut(s)	1182
BstKTI	GATC	6 cut(s)	141, 242, 802, 1063, 1615, 1693
BstMAI	GTCTC	2 cut(s)	32, 945
BstMBI	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
BstMWI	GCNNNNNNNGC	2 cut(s)	176, 310
BstNI	CCWGG	3 cut(s)	269, 450, 1035
BstSCI	CCNGG	3 cut(s)	267, 448, 1033
BstSFI	CTRYAG	1 cut(s)	151
BstSLI	GKGCMC	2 cut(s)	994, 1004
BstUI	CGCG	2 cut(s)	43, 134
BstV1I	GCAGC	3 cut(s)	166, 1000, 1243
BstV2I	GAAGAC	3 cut(s)	460, 737, 1126
BsuRI	GGCC	5 cut(s)	384, 606, 1097, 1133, 1395
BtgI	CCRYGG	2 cut(s)	925, 1383
BtsCI	GGATG	5 cut(s)	169, 431, 707, 1226, 1236
BtsI	GCAGTG	2 cut(s)	1281, 1333
BtsIMutI	CAGTG	5 cut(s)	183, 823, 1281, 1333, 1450
BveI	ACCTGC	1 cut(s)	550
Cac8I	GCNNGC	3 cut(s)	584, 645, 1099
CciI	TCATGA	1 cut(s)	843
CfoI	GCGC	1 cut(s)	1182
Cfr10I	RCCGGY	1 cut(s)	1097
Cfr13I	GGNCC	3 cut(s)	1095, 1131, 1267
CseI	GACGC	4 cut(s)	49, 185, 1232, 1614
CsiI	ACCWGGT	1 cut(s)	267
Csp6I	GTAC	2 cut(s)	444, 878
CviAII	CATG	6 cut(s)	274, 403, 844, 926, 1261, 1384
CviQI	GTAC	2 cut(s)	444, 878
DdeI	CTNAG	4 cut(s)	659, 690, 1218, 1617
DpnI	GATC	6 cut(s)	140, 241, 801, 1062, 1614, 1692
DpnII	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
Eam1104I	CTCTTC	4 cut(s)	633, 1183, 1197, 1554
EarI	CTCTTC	4 cut(s)	633, 1183, 1197, 1554
Ecl136II	GAGCTC	1 cut(s)	643
Eco130I	CCWWGG	4 cut(s)	648, 925, 1152, 1383
Eco24I	GRGCYC	1 cut(s)	645
Eco32I	GATATC	1 cut(s)	79
Eco47I	GGWCC	1 cut(s)	1267
Eco53kI	GAGCTC	1 cut(s)	643
Eco57I	CTGAAG	3 cut(s)	920, 1440, 1692
Eco72I	CACGTG	1 cut(s)	1019
EcoICRI	GAGCTC	1 cut(s)	643
EcoRII	CCWGG	3 cut(s)	267, 448, 1033
EcoRV	GATATC	1 cut(s)	79
EcoT14I	CCWWGG	4 cut(s)	648, 925, 1152, 1383
EcoT38I	GRGCYC	1 cut(s)	645
ErhI	CCWWGG	4 cut(s)	648, 925, 1152, 1383
Esp3I	CGTCTC	1 cut(s)	32
FaeI	CATG	6 cut(s)	277, 406, 847, 929, 1264, 1387
FalI	AAGNNNNNCTT	2 cut(s)	1180, 1212
FaqI	GGGAC	2 cut(s)	885, 1178
FatI	CATG	6 cut(s)	273, 402, 843, 925, 1260, 1383
FblI	GTMKAC	1 cut(s)	174
Fnu4HI	GCNGC	4 cut(s)	132, 180, 1014, 1257
FokI	GGATG	5 cut(s)	176, 438, 694, 1213, 1223
FriOI	GRGCYC	1 cut(s)	645
Fsp4HI	GCNGC	4 cut(s)	132, 180, 1014, 1257
FspAI	RTGCGCAY	1 cut(s)	1181
FspBI	CTAG	4 cut(s)	203, 518, 794, 1605
FspI	TGCGCA	1 cut(s)	1181
GlaI	GCGC	1 cut(s)	1181
GluI	GCNGC	4 cut(s)	132, 180, 1014, 1257
GsaI	CCCAGC	2 cut(s)	657, 715
HaeIII	GGCC	5 cut(s)	384, 606, 1097, 1133, 1395
HapII	CCGG	3 cut(s)	72, 122, 1098
HgaI	GACGC	4 cut(s)	49, 185, 1232, 1614
HhaI	GCGC	1 cut(s)	1182
Hin1II	CATG	6 cut(s)	277, 406, 847, 929, 1264, 1387
Hin6I	GCGC	1 cut(s)	1180
HinP1I	GCGC	1 cut(s)	1180
HincII	GTYRAC	3 cut(s)	175, 862, 1638
HindII	GTYRAC	3 cut(s)	175, 862, 1638
HindIII	AAGCTT	1 cut(s)	827
HinfI	GANTC	6 cut(s)	5, 484, 508, 704, 873, 1191
HpaI	GTTAAC	1 cut(s)	1638
HpaII	CCGG	3 cut(s)	72, 122, 1098
HphI	GGTGA	4 cut(s)	257, 292, 403, 574
Hpy166II	GTNNAC	8 cut(s)	175, 361, 446, 862, 972, 1002, 1022, 1638
Hpy8I	GTNNAC	8 cut(s)	175, 361, 446, 862, 972, 1002, 1022, 1638
Hpy99I	CGWCG	6 cut(s)	139, 176, 179, 215, 240, 1630
HpyAV	CCTTC	7 cut(s)	416, 747, 1004, 1258, 1279, 1419, 1460
HpyCH4III	ACNGT	1 cut(s)	818
HpyCH4IV	ACGT	3 cut(s)	1008, 1018, 1249
HpyCH4V	TGCA	6 cut(s)	117, 429, 947, 1002, 1016, 1109
HpyF10VI	GCNNNNNNNGC	2 cut(s)	176, 310
HpyF3I	CTNAG	4 cut(s)	659, 690, 1218, 1617
HpySE526I	ACGT	3 cut(s)	1008, 1018, 1249
Hsp92II	CATG	6 cut(s)	277, 406, 847, 929, 1264, 1387
HspAI	GCGC	1 cut(s)	1180
Kpn2I	TCCGGA	1 cut(s)	71
KroI	GCCGGC	1 cut(s)	1097
KroNI	GCCGGC	1 cut(s)	1099
KspAI	GTTAAC	1 cut(s)	1638
Kzo9I	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
LguI	GCTCTTC	1 cut(s)	633
LmnI	GCTCC	1 cut(s)	1327
Lsp1109I	GCAGC	3 cut(s)	166, 1000, 1243
LweI	GCATC	5 cut(s)	416, 989, 1235, 1339, 1585
MabI	ACCWGGT	1 cut(s)	267
MaeI	CTAG	4 cut(s)	203, 518, 794, 1605
MaeII	ACGT	3 cut(s)	1008, 1018, 1249
MaeIII	GTNAC	1 cut(s)	155
MalI	GATC	6 cut(s)	140, 241, 801, 1062, 1614, 1692
MboI	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
MfeI	CAATTG	1 cut(s)	716
MhlI	GDGCHC	3 cut(s)	645, 994, 1004
MluCI	AATT	6 cut(s)	565, 716, 888, 915, 1490, 1731
MluI	ACGCGT	1 cut(s)	41
MlyI	GAGTC	2 cut(s)	867, 1200
MmeI	TCCRAC	3 cut(s)	75, 358, 681
MroI	TCCGGA	1 cut(s)	71
MroNI	GCCGGC	1 cut(s)	1097
MroXI	GAANNNNTTC	1 cut(s)	457
MseI	TTAA	7 cut(s)	93, 914, 1292, 1425, 1637, 1730, 1734
MslI	CAYNNNNRTG	1 cut(s)	278
MspA1I	CMGCKG	1 cut(s)	1256
MspI	CCGG	3 cut(s)	72, 122, 1098
MspR9I	CCNGG	3 cut(s)	269, 450, 1035
MunI	CAATTG	1 cut(s)	716
Mva1269I	GAATGC	2 cut(s)	770, 949
MvaI	CCWGG	3 cut(s)	269, 450, 1035
MvnI	CGCG	2 cut(s)	43, 134
MwoI	GCNNNNNNNGC	2 cut(s)	176, 310
NaeI	GCCGGC	1 cut(s)	1099
NcoI	CCATGG	2 cut(s)	925, 1383
NdeII	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
NgoMIV	GCCGGC	1 cut(s)	1097
NlaIII	CATG	6 cut(s)	277, 406, 847, 929, 1264, 1387
NlaIV	GGNNCC	3 cut(s)	551, 665, 991
NmeAIII	GCCGAG	1 cut(s)	410
NsbI	TGCGCA	1 cut(s)	1181
NspV	TTCGAA	1 cut(s)	496
PacI	TTAATTAA	1 cut(s)	1734
PagI	TCATGA	1 cut(s)	843
PaqCI	CACCTGC	1 cut(s)	550
PciSI	GCTCTTC	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	1 cut(s)	219
PctI	GAATGC	2 cut(s)	770, 949
PdiI	GCCGGC	1 cut(s)	1099
PdmI	GAANNNNTTC	1 cut(s)	457
PfeI	GAWTC	4 cut(s)	5, 484, 508, 704
PflMI	CCANNNNNTGG	1 cut(s)	274
PkrI	GCNGC	4 cut(s)	133, 181, 1015, 1258
PleI	GAGTC	2 cut(s)	867, 1199
PmaCI	CACGTG	1 cut(s)	1019
PmlI	CACGTG	1 cut(s)	1019
PpsI	GAGTC	2 cut(s)	867, 1199
Ppu21I	YACGTR	1 cut(s)	1019
PsiI	TTATAA	2 cut(s)	1323, 1701
Psp124BI	GAGCTC	1 cut(s)	645
Psp6I	CCWGG	3 cut(s)	267, 448, 1033
PspCI	CACGTG	1 cut(s)	1019
PspFI	CCCAGC	2 cut(s)	653, 711
PspGI	CCWGG	3 cut(s)	267, 448, 1033
PspN4I	GGNNCC	3 cut(s)	551, 665, 991
PspPI	GGNCC	3 cut(s)	1095, 1131, 1267
PvuII	CAGCTG	1 cut(s)	1256
RsaI	GTAC	2 cut(s)	445, 879
RsaNI	GTAC	2 cut(s)	444, 878
RseI	CAYNNNNRTG	1 cut(s)	278
SacI	GAGCTC	1 cut(s)	645
SalI	GTCGAC	1 cut(s)	173
SapI	GCTCTTC	1 cut(s)	633
SaqAI	TTAA	7 cut(s)	93, 914, 1292, 1425, 1637, 1730, 1734
SatI	GCNGC	4 cut(s)	132, 180, 1014, 1257
Sau3AI	GATC	6 cut(s)	138, 239, 799, 1060, 1612, 1690
Sau96I	GGNCC	3 cut(s)	1095, 1131, 1267
SchI	GAGTC	2 cut(s)	867, 1200
ScrFI	CCNGG	3 cut(s)	269, 450, 1035
SduI	GDGCHC	3 cut(s)	645, 994, 1004
SexAI	ACCWGGT	1 cut(s)	267
SfaNI	GCATC	5 cut(s)	416, 989, 1235, 1339, 1585
SfcI	CTRYAG	1 cut(s)	151
SfuI	TTCGAA	1 cut(s)	496
SgrDI	CGTCGACG	1 cut(s)	173
SinI	GGWCC	1 cut(s)	1267
SmiMI	CAYNNNNRTG	1 cut(s)	278
SmlI	CTYRAG	3 cut(s)	503, 752, 1364
SmoI	CTYRAG	3 cut(s)	503, 752, 1364
SpeI	ACTAGT	1 cut(s)	793
Sse9I	AATT	6 cut(s)	565, 716, 888, 915, 1490, 1731
SsiI	CCGC	1 cut(s)	132
SspMI	CTAG	4 cut(s)	203, 518, 794, 1605
SstI	GAGCTC	1 cut(s)	645
StyD4I	CCNGG	3 cut(s)	267, 448, 1033
StyI	CCWWGG	4 cut(s)	648, 925, 1152, 1383
TaaI	ACNGT	1 cut(s)	818
TaiI	ACGT	3 cut(s)	1011, 1021, 1252
TaqII	GACCGA	1 cut(s)	1284
TasI	AATT	6 cut(s)	565, 716, 888, 915, 1490, 1731
TauI	GCSGC	1 cut(s)	134
TfiI	GAWTC	4 cut(s)	5, 484, 508, 704
Tru1I	TTAA	7 cut(s)	93, 914, 1292, 1425, 1637, 1730, 1734
Tru9I	TTAA	7 cut(s)	93, 914, 1292, 1425, 1637, 1730, 1734
TscAI	CASTG	5 cut(s)	190, 823, 1281, 1340, 1450
TseI	GCWGC	3 cut(s)	179, 1013, 1256
TspDTI	ATGAA	9 cut(s)	419, 737, 832, 950, 1277, 1333, 1692, 1758, 1764
TspGWI	ACGGA	3 cut(s)	50, 224, 1304
TspRI	CASTG	5 cut(s)	190, 823, 1281, 1340, 1450
Van91I	CCANNNNNTGG	1 cut(s)	274
VneI	GTGCAC	1 cut(s)	1000
VpaK11BI	GGWCC	1 cut(s)	1267
XapI	RAATTY	2 cut(s)	888, 1490
XbaI	TCTAGA	1 cut(s)	517
XmiI	GTMKAC	1 cut(s)	174
XmnI	GAANNNNTTC	1 cut(s)	457
XspI	CTAG	4 cut(s)	203, 518, 794, 1605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.