Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0005347

Physical Location & Seq

Genomic Coordinates Reverse (-)

47002500 .. 47006357

Gene Structure 3858 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG334700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGACACCGCCTCCCCCTACCCCAACAGCGCGTTAAGCAACACGCGCTTCTCCGACCTGAAGCCTCCACTCTCCGAACCTGTCCTCCAAGCCCTAACCGAAGGCGGCTTCGACTTCTGCACTCCGGTTCAAGCCGCCACAATCCCCTTGCTATGCAGCTTCAAGGACGTCGCCGTCGACGCCGCCACCGGCTCCGGCAAAACCCTCGCCTTCGTCGTCCCACTCGTAGAGATCCTCCGCCGCGCTTCCACCAACCCCAAACCTCACCAGGTTATGGGGATGATTATATCTCCGACGAGAGAGCTGTCGTCGCAAATTTACAACGTGGCGAAGCCCTTCATTTCGACATTGCCGAATTTCAAGTGTGTGCTTTTGGTTGGGGGAGGGCAAGTGAAAGCAGACGTGAAGCTAATACAGGAGGAGGGAGCCAATTTGCTGATTGGCACACCAGGTAGATTGTATGACATTATGGAACGCATGGATAGCTTGGATTTGCGCAACTTTGAGATTTTGATCTTAGATGAGGCGGATAGGCTGTTGGATATGGGATTCCAAAAGCAGCTGACTGATATTATATCTCGCGTGCCAAAGCTTCGAAGAACTGGTCTTTTTTCAGCTACACAGACTGAGGCAGTTGAAGAGCTGGCCAGGGCGGGGTTGAGGAATCCTGTGAGGGTTGAAGTACGGGCGGAATCAAAATCAAATAAGGATTCAGCGTTGTCACAGCAATCTGCGTCGTCCAAAACACCTTCTGGCCTTGCCATTGAGTATATGGAGTGTGAGGCAGACAAGAAGCCGTCGCAGCTTGTGGATATCCTTGTTAAGAATAAGTCTCACAAGACCATAGTGTACTTCATGACTTGTGCTTGTGTTGACTACTGGGGAGTTGTTCTTCCATGCCTTGCTCCGTTGAAGGATTTCAATCTGATTGCTCTCCATGGGAAGATGAAACAGACCGCAAGGGACAAAGCTCTAGCCTCATTTACATCTCTCTCAAGTGGCATCCTTCTATGCACTGATGTTGCAGCCCGTGGACTTGACATTCCGGGTGTTGACTGTATAGTGCAGTATGATACACCTCAAGATCCAAATGTTTTCGTGCATAGAGTTGGCAGAACAGCACGTATGGGTAGACAAGGAAGTGCAATTGTTTTCCTGTTACCAAAGGAGGAAGCTTATGTGGAATTCCTGCGGATAAGAAGAGTTCCTCTTCAAGAAAGGATATGTCCGGATGATGTTGCTGATGTTGTTCCTCAGATACGATATGCTGCAAAAAAAGACCGTGATATCATGGAAAAGGGCATGAGGGCTTTTGTTTCTTACATCCGTGCATATAAAGAACACCACTGCTCCTACATTTTCAGGTGGAAGGAACTTGAAATTGGGAAGTTGGGCATGGGATTTGGACTACTACAGCTCCCTGCAATGCCTGAGGTAAAGCACAACACACTTTCCACGGAGGGTTTCACCCCTGTTGCAGACATCAACTTGGAGGAGATCAAATATAAGGACAAATCTCGTGAGAAGCAAAGAAGGAAGAATCTGCTAGCAAAGAAAGAGGCAAAAAAGCAAGAACGTAAACCTGAAAAAACAAAAAAAAACCCAAGTGCTAAAGCTAATGAGATGAAGAAGAAAGCAGCTAAACAAAGACGTGCTGCGCAGACGGTTGAAGATGCAGATGAGTTGACTAGAGAATATCGCCTGCTGAAAAAGCTGAAAAAGGGGACTATCGATGAAACTGAGTTTGCCAAGTTGACAGGAACTGAGGACTTACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003727 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008187 GO:0008266 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

592

Amino Acids

66.12

Weight (kDa)

9.16

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	41 - 214	5.2e-41	DEAD/DEAH box helicase
ResIII	PF04851	55 - 194	2.3e-06	Type III restriction enzyme, res subunit
Helicase_C	PF00271	265 - 377	4.4e-25	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	427 - 476	1e-18	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71280 AT1G71280 AT1G71370 AT5G05450
fragaria_vesca	FvH4_6g01590 FvH4_6g01590 FvH4_6g01590 FvH4_6g03480 FvH4_7g25130 FvH4_7g25130 FvH4_7g25130
malus_domestica	MD01G1158100.v1.1 MD07G1226800.v1.1
prunus_persica	Prupe.2G256400_v2.0.a1
pyrus_communis	pycom01g17480 pycom07g20540
rosa_chinensis	RchiOBHm_Chr1g0371021 RchiOBHm_Chr1g0371031
rosa_laevigata	RLG00000026991
rosa_multiflora	Rmu_co8450187.1_g000001 Rmu_sc0001018.1_g000027 Rmu_sc0003272.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286030
rosa_rugosa	Rorug01G0360900
rosa_samantha	Rh1AG371200 Rh1BG334700 Rh1CG348000 Rh1DG365900
rosa_wichuraiana	Rw1G032650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	173
AatII	GACGTC	1 cut(s)	171
Acc16I	TGCGCA	2 cut(s)	497, 1659
AccB7I	CCANNNNNTGG	1 cut(s)	274
AccI	GTMKAC	2 cut(s)	177, 1132
AccII	CGCG	4 cut(s)	32, 46, 243, 582
AccIII	TCCGGA	1 cut(s)	1228
AclWI	GGATC	2 cut(s)	226, 1079
AcoI	YGGCCR	1 cut(s)	645
AcsI	RAATTY	3 cut(s)	315, 355, 1184
AcuI	CTGAAG	1 cut(s)	80
AcyI	GRCGYC	2 cut(s)	168, 180
AfaI	GTAC	2 cut(s)	684, 851
AfiI	CCNNNNNNNGG	2 cut(s)	274, 654
AjiI	CACGTC	2 cut(s)	403, 1652
AjnI	CCWGG	3 cut(s)	267, 448, 647
AjuI	GAANNNNNNNTTGG	2 cut(s)	1365, 1397
AloI	GAACNNNNNNTCC	2 cut(s)	69, 101
Alw26I	GTCTC	1 cut(s)	837
AlwI	GGATC	2 cut(s)	226, 1079
AlwNI	CAGNNNCTG	1 cut(s)	1763
Aor13HI	TCCGGA	1 cut(s)	1228
AoxI	GGCC	2 cut(s)	645, 754
ApeKI	GCWGC	7 cut(s)	156, 559, 802, 1025, 1268, 1637, 1655
ApoI	RAATTY	3 cut(s)	315, 355, 1184
ArsI	GACNNNNNNTTYG	2 cut(s)	589, 621
Asp700I	GAANNNNTTC	2 cut(s)	335, 917
AspLEI	GCGC	5 cut(s)	32, 48, 245, 498, 1660
AsuC2I	CCSGG	1 cut(s)	1047
AsuHPI	GGTGA	2 cut(s)	257, 1459
AsuII	TTCGAA	1 cut(s)	595
AsuNHI	GCTAGC	1 cut(s)	1546
AxyI	CCTNAGG	1 cut(s)	1431
BalI	TGGCCA	1 cut(s)	647
BauI	CACGAG	1 cut(s)	1518
BbvI	GCAGC	7 cut(s)	168, 571, 814, 1037, 1255, 1642, 1649
BceAI	ACGGC	2 cut(s)	158, 781
BcgI	CGANNNNNNTGC	2 cut(s)	187, 221
BciT130I	CCWGG	3 cut(s)	269, 450, 649
BcnI	CCSGG	1 cut(s)	1047
BcoDI	GTCTC	1 cut(s)	837
BfaI	CTAG	3 cut(s)	974, 1547, 1689
BfmI	CTRYAG	1 cut(s)	1412
Bme1390I	CCNGG	4 cut(s)	269, 450, 649, 1047
BmgBI	CACGTC	2 cut(s)	403, 1652
BmiI	GGNNCC	2 cut(s)	193, 427
BmrFI	CCNGG	4 cut(s)	269, 450, 649, 1047
BmrI	ACTGGG	1 cut(s)	889
BmsI	GCATC	2 cut(s)	1011, 1663
BmtI	GCTAGC	1 cut(s)	1550
BmuI	ACTGGG	1 cut(s)	889
Bpu14I	TTCGAA	1 cut(s)	595
BpuEI	CTTGAG	2 cut(s)	979, 1065
BpuMI	CCSGG	1 cut(s)	1047
Bsa29I	ATCGAT	1 cut(s)	1731
BsaAI	YACGTR	1 cut(s)	1124
BsaBI	GATNNNNATC	2 cut(s)	512, 921
BsaHI	GRCGYC	2 cut(s)	168, 180
BsaJI	CCNNGG	4 cut(s)	648, 937, 1030, 1455
BsaWI	WCCGGW	2 cut(s)	124, 1228
BsaXI	ACNNNNNCTCC	9 cut(s)	26, 69, 99, 375, 405, 1334, 1364, 1401, 1431
Bsc4I	CCNNNNNNNGG	2 cut(s)	274, 654
Bse118I	RCCGGY	1 cut(s)	188
Bse1I	ACTGG	2 cut(s)	607, 884
Bse21I	CCTNAGG	1 cut(s)	1431
Bse3DI	GCAATG	2 cut(s)	347, 1431
Bse8I	GATNNNNATC	2 cut(s)	512, 921
BseAI	TCCGGA	1 cut(s)	1228
BseBI	CCWGG	3 cut(s)	269, 450, 649
BseCI	ATCGAT	1 cut(s)	1731
BseDI	CCNNGG	4 cut(s)	648, 937, 1030, 1455
BseGI	GGATG	4 cut(s)	285, 1002, 1237, 1323
BseJI	GATNNNNATC	2 cut(s)	512, 921
BseLI	CCNNNNNNNGG	2 cut(s)	274, 654
BseMI	GCAATG	2 cut(s)	347, 1431
BseMII	CTCAG	5 cut(s)	618, 1268, 1422, 1731, 1755
BseNI	ACTGG	2 cut(s)	607, 884
BseRI	GAGGAG	2 cut(s)	434, 1508
BseXI	GCAGC	7 cut(s)	168, 571, 814, 1037, 1255, 1642, 1649
BsgI	GTGCAG	2 cut(s)	103, 1085
Bsh1236I	CGCG	4 cut(s)	32, 46, 243, 582
BshFI	GGCC	2 cut(s)	647, 756
BshVI	ATCGAT	1 cut(s)	1731
BsiSI	CCGG	5 cut(s)	125, 189, 195, 1046, 1229
BslFI	GGGAC	3 cut(s)	203, 977, 1738
BslI	CCNNNNNNNGG	2 cut(s)	274, 654
BsmAI	GTCTC	1 cut(s)	837
BsmFI	GGGAC	3 cut(s)	203, 977, 1738
BsnI	GGCC	2 cut(s)	647, 756
Bsp119I	TTCGAA	1 cut(s)	595
Bsp13I	TCCGGA	1 cut(s)	1228
Bsp143I	GATC	4 cut(s)	231, 513, 1084, 1497
Bsp19I	CCATGG	1 cut(s)	937
BspANI	GGCC	2 cut(s)	647, 756
BspCNI	CTCAG	5 cut(s)	619, 1267, 1423, 1732, 1756
BspDI	ATCGAT	1 cut(s)	1731
BspEI	TCCGGA	1 cut(s)	1228
BspFNI	CGCG	4 cut(s)	32, 46, 243, 582
BspHI	TCATGA	1 cut(s)	855
BspLI	GGNNCC	2 cut(s)	193, 427
BspOI	GCTAGC	1 cut(s)	1550
BspPI	GGATC	2 cut(s)	226, 1079
BspQI	GCTCTTC	1 cut(s)	633
BspT104I	TTCGAA	1 cut(s)	595
BsrDI	GCAATG	2 cut(s)	347, 1431
BsrFI	RCCGGY	1 cut(s)	188
BsrI	ACTGG	2 cut(s)	607, 884
BssAI	RCCGGY	1 cut(s)	188
BssECI	CCNNGG	4 cut(s)	648, 937, 1030, 1455
BssMI	GATC	4 cut(s)	231, 513, 1084, 1497
BssNI	GRCGYC	2 cut(s)	168, 180
BssSI	CACGAG	1 cut(s)	1518
BssT1I	CCWWGG	1 cut(s)	937
Bst2BI	CACGAG	1 cut(s)	1518
Bst2UI	CCWGG	3 cut(s)	269, 450, 649
Bst4CI	ACNGT	3 cut(s)	1058, 1283, 1666
Bst6I	CTCTTC	3 cut(s)	633, 1195, 1215
BstACI	GRCGYC	2 cut(s)	168, 180
BstBAI	YACGTR	1 cut(s)	1124
BstBI	TTCGAA	1 cut(s)	595
BstC8I	GCNNGC	4 cut(s)	584, 645, 1548, 1703
BstDEI	CTNAG	6 cut(s)	517, 627, 1254, 1431, 1740, 1764
BstDSI	CCRYGG	3 cut(s)	937, 1030, 1455
BstF5I	GGATG	4 cut(s)	285, 1002, 1237, 1323
BstFNI	CGCG	4 cut(s)	32, 46, 243, 582
BstHHI	GCGC	5 cut(s)	32, 48, 245, 498, 1660
BstKTI	GATC	4 cut(s)	234, 516, 1087, 1500
BstMAI	GTCTC	1 cut(s)	837
BstMBI	GATC	4 cut(s)	231, 513, 1084, 1497
BstMWI	GCNNNNNNNGC	7 cut(s)	36, 45, 179, 310, 483, 802, 1711
BstNI	CCWGG	3 cut(s)	269, 450, 649
BstSCI	CCNGG	4 cut(s)	267, 448, 647, 1045
BstSFI	CTRYAG	1 cut(s)	1412
BstUI	CGCG	4 cut(s)	32, 46, 243, 582
BstV1I	GCAGC	7 cut(s)	168, 571, 814, 1037, 1255, 1642, 1649
BstX2I	RGATCY	2 cut(s)	231, 1084
BstYI	RGATCY	2 cut(s)	231, 1084
Bsu15I	ATCGAT	1 cut(s)	1731
Bsu36I	CCTNAGG	1 cut(s)	1431
BsuRI	GGCC	2 cut(s)	647, 756
BsuTUI	ATCGAT	1 cut(s)	1731
BtgI	CCRYGG	3 cut(s)	937, 1030, 1455
BtrI	CACGTC	2 cut(s)	403, 1652
BtsCI	GGATG	4 cut(s)	285, 1002, 1237, 1323
BtsI	GCAGTG	1 cut(s)	1345
BtsIMutI	CAGTG	2 cut(s)	1014, 1345
Cac8I	GCNNGC	4 cut(s)	584, 645, 1548, 1703
CaiI	CAGNNNCTG	1 cut(s)	1763
CciI	TCATGA	1 cut(s)	855
CfoI	GCGC	5 cut(s)	32, 48, 245, 498, 1660
Cfr10I	RCCGGY	1 cut(s)	188
ClaI	ATCGAT	1 cut(s)	1731
CseI	GACGC	2 cut(s)	188, 723
CsiI	ACCWGGT	2 cut(s)	267, 448
Csp6I	GTAC	2 cut(s)	683, 850
CviAII	CATG	7 cut(s)	478, 856, 897, 938, 1291, 1303, 1396
CviQI	GTAC	2 cut(s)	683, 850
DdeI	CTNAG	6 cut(s)	517, 627, 1254, 1431, 1740, 1764
DpnI	GATC	4 cut(s)	233, 515, 1086, 1499
DpnII	GATC	4 cut(s)	231, 513, 1084, 1497
DrdI	GACNNNNNNGTC	1 cut(s)	173
DseDI	GACNNNNNNGTC	1 cut(s)	173
EaeI	YGGCCR	1 cut(s)	645
Eam1104I	CTCTTC	3 cut(s)	633, 1195, 1215
EarI	CTCTTC	3 cut(s)	633, 1195, 1215
EciI	GGCGGA	3 cut(s)	227, 542, 704
Eco130I	CCWWGG	1 cut(s)	937
Eco32I	GATATC	2 cut(s)	814, 1288
Eco57I	CTGAAG	1 cut(s)	80
Eco81I	CCTNAGG	1 cut(s)	1431
EcoRI	GAATTC	1 cut(s)	1184
EcoRII	CCWGG	3 cut(s)	267, 448, 647
EcoRV	GATATC	2 cut(s)	814, 1288
EcoT14I	CCWWGG	1 cut(s)	937
ErhI	CCWWGG	1 cut(s)	937
FaeI	CATG	7 cut(s)	481, 859, 900, 941, 1294, 1306, 1399
FaqI	GGGAC	3 cut(s)	203, 977, 1738
FatI	CATG	7 cut(s)	477, 855, 896, 937, 1290, 1302, 1395
FauI	CCCGC	1 cut(s)	646
FblI	GTMKAC	2 cut(s)	177, 1132
FokI	GGATG	4 cut(s)	292, 989, 1244, 1310
FspBI	CTAG	3 cut(s)	974, 1547, 1689
FspI	TGCGCA	2 cut(s)	497, 1659
GlaI	GCGC	5 cut(s)	31, 47, 244, 497, 1659
HaeIII	GGCC	2 cut(s)	647, 756
HapII	CCGG	5 cut(s)	125, 189, 195, 1046, 1229
HgaI	GACGC	2 cut(s)	188, 723
HhaI	GCGC	5 cut(s)	32, 48, 245, 498, 1660
Hin1I	GRCGYC	2 cut(s)	168, 180
Hin1II	CATG	7 cut(s)	481, 859, 900, 941, 1294, 1306, 1399
Hin6I	GCGC	5 cut(s)	30, 46, 243, 496, 1658
HinP1I	GCGC	5 cut(s)	30, 46, 243, 496, 1658
HincII	GTYRAC	5 cut(s)	178, 874, 1054, 1686, 1755
HindII	GTYRAC	5 cut(s)	178, 874, 1054, 1686, 1755
HindIII	AAGCTT	2 cut(s)	590, 1173
HinfI	GANTC	5 cut(s)	549, 664, 692, 710, 1540
HpaII	CCGG	5 cut(s)	125, 189, 195, 1046, 1229
HphI	GGTGA	2 cut(s)	257, 1459
Hpy166II	GTNNAC	9 cut(s)	178, 850, 874, 1034, 1054, 1133, 1580, 1686, 1755
Hpy188I	TCNGA	5 cut(s)	55, 76, 294, 927, 1257
Hpy188III	TCNNGA	5 cut(s)	856, 1082, 1214, 1229, 1520
Hpy8I	GTNNAC	9 cut(s)	178, 850, 874, 1034, 1054, 1133, 1580, 1686, 1755
Hpy99I	CGWCG	8 cut(s)	173, 179, 182, 218, 298, 313, 739, 802
HpyAV	CCTTC	8 cut(s)	95, 220, 346, 759, 907, 1016, 1363, 1527
HpyCH4III	ACNGT	3 cut(s)	1058, 1283, 1666
HpyCH4IV	ACGT	6 cut(s)	168, 324, 402, 1123, 1576, 1651
HpyF10VI	GCNNNNNNNGC	7 cut(s)	36, 45, 179, 310, 483, 802, 1711
HpyF3I	CTNAG	6 cut(s)	517, 627, 1254, 1431, 1740, 1764
HpySE526I	ACGT	6 cut(s)	168, 324, 402, 1123, 1576, 1651
Hsp92I	GRCGYC	2 cut(s)	168, 180
Hsp92II	CATG	7 cut(s)	481, 859, 900, 941, 1294, 1306, 1399
HspAI	GCGC	5 cut(s)	30, 46, 243, 496, 1658
Kpn2I	TCCGGA	1 cut(s)	1228
Kzo9I	GATC	4 cut(s)	231, 513, 1084, 1497
LguI	GCTCTTC	1 cut(s)	633
LmnI	GCTCC	5 cut(s)	197, 425, 910, 1355, 1422
Lsp1109I	GCAGC	7 cut(s)	168, 571, 814, 1037, 1255, 1642, 1649
LweI	GCATC	2 cut(s)	1011, 1663
MabI	ACCWGGT	2 cut(s)	267, 448
MaeI	CTAG	3 cut(s)	974, 1547, 1689
MaeII	ACGT	6 cut(s)	168, 324, 402, 1123, 1576, 1651
MaeIII	GTNAC	2 cut(s)	720, 1158
MalI	GATC	4 cut(s)	233, 515, 1086, 1499
MboI	GATC	4 cut(s)	231, 513, 1084, 1497
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	2 cut(s)	231, 1084
MlsI	TGGCCA	1 cut(s)	647
MluCI	AATT	6 cut(s)	315, 355, 430, 1146, 1184, 1380
MluNI	TGGCCA	1 cut(s)	647
MmeI	TCCRAC	3 cut(s)	78, 317, 519
Mox20I	TGGCCA	1 cut(s)	647
MroI	TCCGGA	1 cut(s)	1228
MroXI	GAANNNNTTC	2 cut(s)	335, 917
MscI	TGGCCA	1 cut(s)	647
MseI	TTAA	2 cut(s)	35, 822
Msp20I	TGGCCA	1 cut(s)	647
MspA1I	CMGCKG	1 cut(s)	562
MspI	CCGG	5 cut(s)	125, 189, 195, 1046, 1229
MspR9I	CCNGG	4 cut(s)	269, 450, 649, 1047
MunI	CAATTG	1 cut(s)	1146
MvaI	CCWGG	3 cut(s)	269, 450, 649
MvnI	CGCG	4 cut(s)	32, 46, 243, 582
MwoI	GCNNNNNNNGC	7 cut(s)	36, 45, 179, 310, 483, 802, 1711
NciI	CCSGG	1 cut(s)	1047
NcoI	CCATGG	1 cut(s)	937
NdeII	GATC	4 cut(s)	231, 513, 1084, 1497
NheI	GCTAGC	1 cut(s)	1546
NlaIII	CATG	7 cut(s)	481, 859, 900, 941, 1294, 1306, 1399
NlaIV	GGNNCC	2 cut(s)	193, 427
NmuCI	GTSAC	1 cut(s)	720
NsbI	TGCGCA	2 cut(s)	497, 1659
NspV	TTCGAA	1 cut(s)	595
PagI	TCATGA	1 cut(s)	855
PciSI	GCTCTTC	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	4 cut(s)	174, 213, 222, 350
PdmI	GAANNNNTTC	2 cut(s)	335, 917
PfeI	GAWTC	5 cut(s)	549, 664, 692, 710, 1540
PflMI	CCANNNNNTGG	1 cut(s)	274
Ppu21I	YACGTR	1 cut(s)	1124
Psp6I	CCWGG	3 cut(s)	267, 448, 647
PspGI	CCWGG	3 cut(s)	267, 448, 647
PspN4I	GGNNCC	2 cut(s)	193, 427
PstNI	CAGNNNCTG	1 cut(s)	1763
PsuI	RGATCY	2 cut(s)	231, 1084
PvuII	CAGCTG	1 cut(s)	562
RsaI	GTAC	2 cut(s)	684, 851
RsaNI	GTAC	2 cut(s)	683, 850
SalI	GTCGAC	1 cut(s)	176
SapI	GCTCTTC	1 cut(s)	633
SaqAI	TTAA	2 cut(s)	35, 822
Sau3AI	GATC	4 cut(s)	231, 513, 1084, 1497
ScrFI	CCNGG	4 cut(s)	269, 450, 649, 1047
SexAI	ACCWGGT	2 cut(s)	267, 448
SfaNI	GCATC	2 cut(s)	1011, 1663
SfcI	CTRYAG	1 cut(s)	1412
SfuI	TTCGAA	1 cut(s)	595
SgrDI	CGTCGACG	1 cut(s)	176
SmlI	CTYRAG	2 cut(s)	994, 1080
SmoI	CTYRAG	2 cut(s)	994, 1080
Sse9I	AATT	6 cut(s)	315, 355, 430, 1146, 1184, 1380
SspMI	CTAG	3 cut(s)	974, 1547, 1689
StyD4I	CCNGG	4 cut(s)	267, 448, 647, 1045
StyI	CCWWGG	1 cut(s)	937
TaaI	ACNGT	3 cut(s)	1058, 1283, 1666
TaiI	ACGT	6 cut(s)	171, 327, 405, 1126, 1579, 1654
TaqI	TCGA	5 cut(s)	111, 177, 344, 595, 1731
TasI	AATT	6 cut(s)	315, 355, 430, 1146, 1184, 1380
TatI	WGTACW	1 cut(s)	849
TauI	GCSGC	4 cut(s)	108, 137, 185, 243
TfiI	GAWTC	5 cut(s)	549, 664, 692, 710, 1540
Tru1I	TTAA	2 cut(s)	35, 822
Tru9I	TTAA	2 cut(s)	35, 822
TscAI	CASTG	2 cut(s)	1021, 1352
TseFI	GTSAC	1 cut(s)	720
TseI	GCWGC	7 cut(s)	156, 559, 802, 1025, 1268, 1637, 1655
Tsp45I	GTSAC	1 cut(s)	720
TspDTI	ATGAA	5 cut(s)	328, 844, 962, 1640, 1749
TspGWI	ACGGA	3 cut(s)	897, 1316, 1472
TspRI	CASTG	2 cut(s)	1021, 1352
Van91I	CCANNNNNTGG	1 cut(s)	274
XapI	RAATTY	3 cut(s)	315, 355, 1184
XcmI	CCANNNNNNNNNTGG	1 cut(s)	769
XmiI	GTMKAC	2 cut(s)	177, 1132
XmnI	GAANNNNTTC	2 cut(s)	335, 917
XspI	CTAG	3 cut(s)	974, 1547, 1689
ZraI	GACGTC	1 cut(s)	169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.