Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0005347

Physical Location & Seq

Genomic Coordinates Reverse (-)

19233409 .. 19238296

Gene Structure 4888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g25130.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGACACCGCCTCCCCCTACCCCAACAGCGCGTTAAGCAACACGCGCTTCTCCGAACTCAAGCCTCCTCTCTCCGAACCCGTTCTCCAAGCCCTAACCGCCGCCGGCTTCGACTTCTGCACTCCGGTTCAAGCCGCCACAATCCCCTTGCTATGTAGCTTCAAGGACGTCGCCGTCGACGCCGCCACCGGCTCCGGCAAAACCCTAGCCTTCGTCGTCCCCCTCGTCGAGATCCTCCGCCGCGCTTCCACCGATCCCAAACCTAACCAGGTGATGGGAATGATCATATCTCCGACGAGAGAGCTGTCCTCGCAGATTTACAACGTGGCGAGGCCGTTCATTTCGACGTTGCCGAATTTCAAGTGTGTGCTTTTGGTTGGAGGAGGCAGTGTGAAAGCTGACATGAAGCTGATTCAGGAGGACGGAGCCAATCTGCTGATTGGGACACCAGGTAGACTCTACGACATTATGGACCGCATGGATAGCTTGGATTTGCGGAGCTTTGAGATTTTGATTTTGGATGAGGCGGATAGGCTGCTGGATATGGGGTTCCAGAAGCAGCTGACTGATATTATATCTCGCGTGCCAAAGCTGAGAAGAACTGGTCTTTTTTCGGCTACTCAGACTGAGGCAGTTGAGGAGCTGGCCAGGGCGGGATTGAGGAATCCAGTGAGGGTTGAAGTACGTGCAGAGTCTAACTCAAATAAGGATTCAGCATTGTCGCAGCAATCAGCGTCGTCCAAAACACCTTCTGGACTTGCTCTTGAGTATATGGAGTGCGAGGCAGACAAGAAGCCGTCACAGCTTGTGGATATTCTTATTAAGAATAAGTCTCACAAGACCATAGTGTATTTCATGACATGTGCTTGTGTTGACTACTGGGGAGTTGTTCTTCCATGTCTTGCTCCCTTGAAGGATTTCAATTTGATTGCTCTCCACGGGAAGATGAAACAGGTCGCAAGGGACAAAGCTCTGGCCTCATTTACATCTCTCTCAAGTGGCGTCCTTCTATGCACTGATGTTGCAGCCCGTGGACTTGACATTCCGGGTGTTGACTGTATAGTGCAGTATGATACACCTCAAGATCCTAATGTTTTCGTACATAGAGTTGGCAGAACTGCACGTATGGGTAGACAAGGAAGTGCAATTGTTTTCCTATTACCAAAGGAGGAAGCTTATGTGGAATTCCTGCGGATAAGAAGAGTTCCTCTTCAAGAAAGGAAATGTCCGGATGATGTCTCTGATGTTGTTCCTCAGATACGGTCTGCTGCAAAAAAAGACCGTGATATCATGGAAAAGGGCATGCGAGCTTTTGTTTCTTACATCCGTGCATATAAAGAACACCACTGCTCCTACATTTTCAGGTGGAAAGAACTTGAAATTGGGAAGTTGGGCATGGGATTTGGACTACTACAGCTCCCTGCAATGCCCGAGGTAAAGCACAACACACTTTCCACGGAGGGTTTCACCCCAGTAGCAGACATCAACTTGGAGGAGATCAAATATAAGGACAAATCTCGTGAGAAGCAAAGGAGGAAGAATCTGCTAGCAAAGAAAGAGGCAAAAAACCAAGATCCTAAACCTCAAAAAACCAACAAAAATCCAAGTGCCACAGCTAAGGTGATGAAGAAGAAAACAGCTAAGAAAAGACGCGCTGAACAGACAGTTGAAGATGCTGATGAGTTGACGAGAGAATATCGCCTGCTAAAAAAGCTGAAAAAGGGGACTATTGATGAAGCTGAGTTTGCTAAGATGACAGGAACTGAAGACTTGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003727 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008187 GO:0008266 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

593

Amino Acids

65.9

Weight (kDa)

9.13

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	41 - 214	5.4e-41	DEAD/DEAH box helicase
ResIII	PF04851	55 - 197	5.7e-06	Type III restriction enzyme, res subunit
Helicase_C	PF00271	265 - 377	5.5e-25	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71280 AT1G71280 AT1G71370 AT5G05450
fragaria_vesca	FvH4_6g01590 FvH4_6g01590 FvH4_6g01590 FvH4_6g03480 FvH4_7g25130 FvH4_7g25130 FvH4_7g25130
malus_domestica	MD01G1158100.v1.1 MD07G1226800.v1.1
prunus_persica	Prupe.2G256400_v2.0.a1
pyrus_communis	pycom01g17480 pycom07g20540
rosa_chinensis	RchiOBHm_Chr1g0371021 RchiOBHm_Chr1g0371031
rosa_laevigata	RLG00000026991
rosa_multiflora	Rmu_co8450187.1_g000001 Rmu_sc0001018.1_g000027 Rmu_sc0003272.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286030
rosa_rugosa	Rorug01G0360900
rosa_samantha	Rh1AG371200 Rh1BG334700 Rh1CG348000 Rh1DG365900
rosa_wichuraiana	Rw1G032650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	173
AatII	GACGTC	1 cut(s)	171
AccB7I	CCANNNNNTGG	1 cut(s)	274
AccI	GTMKAC	3 cut(s)	177, 454, 1132
AccII	CGCG	5 cut(s)	32, 46, 243, 582, 1653
AccIII	TCCGGA	1 cut(s)	1228
AclWI	GGATC	4 cut(s)	226, 248, 1079, 1568
AcoI	YGGCCR	1 cut(s)	645
AcsI	RAATTY	2 cut(s)	355, 1184
AcyI	GRCGYC	3 cut(s)	168, 180, 1002
AfaI	GTAC	2 cut(s)	684, 1101
AfiI	CCNNNNNNNGG	1 cut(s)	274
AflIII	ACRYGT	1 cut(s)	860
AgsI	TTSAA	9 cut(s)	131, 163, 361, 680, 913, 922, 1214, 1379, 1670
AjnI	CCWGG	3 cut(s)	267, 448, 647
AjuI	GAANNNNNNNTTGG	2 cut(s)	1365, 1397
AloI	GAACNNNNNNTCC	4 cut(s)	69, 101, 533, 565
Alw26I	GTCTC	2 cut(s)	837, 1243
AlwI	GGATC	4 cut(s)	226, 248, 1079, 1568
AlwNI	CAGNNNCTG	1 cut(s)	1763
Ama87I	CYCGRG	1 cut(s)	1430
Aor13HI	TCCGGA	1 cut(s)	1228
AoxI	GGCC	3 cut(s)	332, 645, 975
ApeKI	GCWGC	5 cut(s)	535, 559, 724, 1025, 1268
ApoI	RAATTY	2 cut(s)	355, 1184
Asp700I	GAANNNNTTC	2 cut(s)	81, 917
AspLEI	GCGC	4 cut(s)	32, 48, 245, 1655
AspS9I	GGNCC	1 cut(s)	472
AsuC2I	CCSGG	1 cut(s)	1047
AsuHPI	GGTGA	3 cut(s)	283, 1459, 1633
AsuNHI	GCTAGC	1 cut(s)	1546
AvaI	CYCGRG	1 cut(s)	1430
AvaII	GGWCC	1 cut(s)	472
BalI	TGGCCA	1 cut(s)	647
BauI	CACGAG	1 cut(s)	1518
BbsI	GAAGAC	1 cut(s)	1773
BbvI	GCAGC	5 cut(s)	522, 571, 736, 1037, 1255
BccI	CCATC	1 cut(s)	268
BceAI	ACGGC	3 cut(s)	158, 319, 781
BciT130I	CCWGG	3 cut(s)	269, 450, 649
BclI	TGATCA	1 cut(s)	282
BcnI	CCSGG	1 cut(s)	1047
BcoDI	GTCTC	2 cut(s)	837, 1243
BfaI	CTAG	2 cut(s)	206, 1547
BfmI	CTRYAG	1 cut(s)	1412
BisI	GCNGC	9 cut(s)	102, 135, 183, 241, 536, 560, 725, 1026, 1269
BlsI	GCNGC	9 cut(s)	103, 136, 184, 242, 537, 561, 726, 1027, 1270
Bme1390I	CCNGG	4 cut(s)	269, 450, 649, 1047
Bme18I	GGWCC	1 cut(s)	472
BmeT110I	CYCGRG	1 cut(s)	1430
BmgT120I	GGNCC	1 cut(s)	472
BmiI	GGNNCC	3 cut(s)	193, 427, 551
BmrFI	CCNGG	4 cut(s)	269, 450, 649, 1047
BmrI	ACTGGG	2 cut(s)	889, 1466
BmsI	GCATC	1 cut(s)	1663
BmtI	GCTAGC	1 cut(s)	1550
BmuI	ACTGGG	2 cut(s)	889, 1466
BpiI	GAAGAC	1 cut(s)	1773
BplI	GAGNNNNNCTC	4 cut(s)	293, 325, 683, 715
Bpu10I	CCTNAGC	1 cut(s)	1617
BpuEI	CTTGAG	4 cut(s)	44, 785, 979, 1065
BpuMI	CCSGG	1 cut(s)	1047
BsaAI	YACGTR	2 cut(s)	686, 1124
BsaHI	GRCGYC	3 cut(s)	168, 180, 1002
BsaJI	CCNNGG	5 cut(s)	648, 937, 1030, 1431, 1455
BsaWI	WCCGGW	2 cut(s)	124, 1228
BsaXI	ACNNNNNCTCC	9 cut(s)	26, 69, 99, 375, 405, 1334, 1364, 1401, 1431
Bsc4I	CCNNNNNNNGG	1 cut(s)	274
Bse118I	RCCGGY	2 cut(s)	104, 188
Bse1I	ACTGG	4 cut(s)	607, 668, 884, 1472
Bse3DI	GCAATG	1 cut(s)	1431
BseAI	TCCGGA	1 cut(s)	1228
BseBI	CCWGG	3 cut(s)	269, 450, 649
BseDI	CCNNGG	5 cut(s)	648, 937, 1030, 1431, 1455
BseGI	GGATG	3 cut(s)	526, 1237, 1323
BseLI	CCNNNNNNNGG	1 cut(s)	274
BseMI	GCAATG	1 cut(s)	1431
BseMII	CTCAG	5 cut(s)	584, 618, 635, 1268, 1731
BseNI	ACTGG	4 cut(s)	607, 668, 884, 1472
BseRI	GAGGAG	4 cut(s)	57, 396, 653, 1508
BseXI	GCAGC	5 cut(s)	522, 571, 736, 1037, 1255
BsgI	GTGCAG	4 cut(s)	103, 708, 1085, 1104
Bsh1236I	CGCG	5 cut(s)	32, 46, 243, 582, 1653
BshFI	GGCC	3 cut(s)	334, 647, 977
BsiHKCI	CYCGRG	1 cut(s)	1430
BsiSI	CCGG	6 cut(s)	105, 125, 189, 195, 1046, 1229
BslFI	GGGAC	4 cut(s)	203, 457, 977, 1738
BslI	CCNNNNNNNGG	1 cut(s)	274
BsmAI	GTCTC	2 cut(s)	837, 1243
BsmFI	GGGAC	4 cut(s)	203, 457, 977, 1738
BsnI	GGCC	3 cut(s)	334, 647, 977
BsoBI	CYCGRG	1 cut(s)	1430
Bsp13I	TCCGGA	1 cut(s)	1228
Bsp143I	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
BspANI	GGCC	3 cut(s)	334, 647, 977
BspCNI	CTCAG	5 cut(s)	585, 619, 634, 1267, 1732
BspEI	TCCGGA	1 cut(s)	1228
BspFNI	CGCG	5 cut(s)	32, 46, 243, 582, 1653
BspHI	TCATGA	1 cut(s)	855
BspLI	GGNNCC	3 cut(s)	193, 427, 551
BspOI	GCTAGC	1 cut(s)	1550
BspPI	GGATC	4 cut(s)	226, 248, 1079, 1568
BsrDI	GCAATG	1 cut(s)	1431
BsrFI	RCCGGY	2 cut(s)	104, 188
BsrI	ACTGG	4 cut(s)	607, 668, 884, 1472
BssAI	RCCGGY	2 cut(s)	104, 188
BssECI	CCNNGG	5 cut(s)	648, 937, 1030, 1431, 1455
BssMI	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
BssNI	GRCGYC	3 cut(s)	168, 180, 1002
BssSI	CACGAG	1 cut(s)	1518
Bst2BI	CACGAG	1 cut(s)	1518
Bst2UI	CCWGG	3 cut(s)	269, 450, 649
Bst4CI	ACNGT	4 cut(s)	1058, 1263, 1283, 1666
Bst6I	CTCTTC	2 cut(s)	1195, 1215
BstACI	GRCGYC	3 cut(s)	168, 180, 1002
BstBAI	YACGTR	2 cut(s)	686, 1124
BstC8I	GCNNGC	7 cut(s)	106, 584, 645, 1304, 1308, 1548, 1703
BstDEI	CTNAG	8 cut(s)	593, 621, 627, 1254, 1617, 1641, 1740, 1749
BstDSI	CCRYGG	3 cut(s)	937, 1030, 1455
BstF5I	GGATG	3 cut(s)	526, 1237, 1323
BstFNI	CGCG	5 cut(s)	32, 46, 243, 582, 1653
BstHHI	GCGC	4 cut(s)	32, 48, 245, 1655
BstKTI	GATC	6 cut(s)	234, 256, 285, 1087, 1500, 1576
BstMAI	GTCTC	2 cut(s)	837, 1243
BstMBI	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
BstMWI	GCNNNNNNNGC	9 cut(s)	36, 45, 98, 179, 310, 483, 802, 1711, 1745
BstNI	CCWGG	3 cut(s)	269, 450, 649
BstNSI	RCATGY	2 cut(s)	864, 1306
BstSCI	CCNGG	4 cut(s)	267, 448, 647, 1045
BstSFI	CTRYAG	1 cut(s)	1412
BstUI	CGCG	5 cut(s)	32, 46, 243, 582, 1653
BstV1I	GCAGC	5 cut(s)	522, 571, 736, 1037, 1255
BstV2I	GAAGAC	1 cut(s)	1773
BstX2I	RGATCY	3 cut(s)	231, 1084, 1573
BstYI	RGATCY	3 cut(s)	231, 1084, 1573
BsuRI	GGCC	3 cut(s)	334, 647, 977
BtgI	CCRYGG	3 cut(s)	937, 1030, 1455
BtsCI	GGATG	3 cut(s)	526, 1237, 1323
BtsI	GCAGTG	2 cut(s)	394, 1345
BtsIMutI	CAGTG	4 cut(s)	394, 675, 1014, 1345
Cac8I	GCNNGC	7 cut(s)	106, 584, 645, 1304, 1308, 1548, 1703
CaiI	CAGNNNCTG	1 cut(s)	1763
CciI	TCATGA	1 cut(s)	855
CfoI	GCGC	4 cut(s)	32, 48, 245, 1655
Cfr10I	RCCGGY	2 cut(s)	104, 188
Cfr13I	GGNCC	1 cut(s)	472
CseI	GACGC	4 cut(s)	188, 723, 991, 1659
CsiI	ACCWGGT	2 cut(s)	267, 448
Csp6I	GTAC	2 cut(s)	683, 1100
CviAII	CATG	8 cut(s)	403, 478, 856, 861, 897, 1291, 1303, 1396
CviQI	GTAC	2 cut(s)	683, 1100
DdeI	CTNAG	8 cut(s)	593, 621, 627, 1254, 1617, 1641, 1740, 1749
DpnI	GATC	6 cut(s)	233, 255, 284, 1086, 1499, 1575
DpnII	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
DrdI	GACNNNNNNGTC	1 cut(s)	173
DseDI	GACNNNNNNGTC	1 cut(s)	173
EaeI	YGGCCR	1 cut(s)	645
Eam1104I	CTCTTC	2 cut(s)	1195, 1215
EarI	CTCTTC	2 cut(s)	1195, 1215
EciI	GGCGGA	2 cut(s)	227, 542
Eco32I	GATATC	1 cut(s)	1288
Eco47I	GGWCC	1 cut(s)	472
Eco88I	CYCGRG	1 cut(s)	1430
EcoRI	GAATTC	1 cut(s)	1184
EcoRII	CCWGG	3 cut(s)	267, 448, 647
EcoRV	GATATC	1 cut(s)	1288
FaeI	CATG	8 cut(s)	406, 481, 859, 864, 900, 1294, 1306, 1399
FalI	AAGNNNNNCTT	1 cut(s)	1758
FaqI	GGGAC	4 cut(s)	203, 457, 977, 1738
FatI	CATG	8 cut(s)	402, 477, 855, 860, 896, 1290, 1302, 1395
FauI	CCCGC	1 cut(s)	646
FbaI	TGATCA	1 cut(s)	282
FblI	GTMKAC	3 cut(s)	177, 454, 1132
Fnu4HI	GCNGC	9 cut(s)	102, 135, 183, 241, 536, 560, 725, 1026, 1269
FokI	GGATG	3 cut(s)	533, 1244, 1310
Fsp4HI	GCNGC	9 cut(s)	102, 135, 183, 241, 536, 560, 725, 1026, 1269
FspBI	CTAG	2 cut(s)	206, 1547
GlaI	GCGC	4 cut(s)	31, 47, 244, 1654
GluI	GCNGC	9 cut(s)	102, 135, 183, 241, 536, 560, 725, 1026, 1269
HaeIII	GGCC	3 cut(s)	334, 647, 977
HapII	CCGG	6 cut(s)	105, 125, 189, 195, 1046, 1229
HgaI	GACGC	4 cut(s)	188, 723, 991, 1659
HhaI	GCGC	4 cut(s)	32, 48, 245, 1655
Hin1I	GRCGYC	3 cut(s)	168, 180, 1002
Hin1II	CATG	8 cut(s)	406, 481, 859, 864, 900, 1294, 1306, 1399
Hin6I	GCGC	4 cut(s)	30, 46, 243, 1653
HinP1I	GCGC	4 cut(s)	30, 46, 243, 1653
HincII	GTYRAC	4 cut(s)	178, 874, 1054, 1686
HindII	GTYRAC	4 cut(s)	178, 874, 1054, 1686
HindIII	AAGCTT	1 cut(s)	1173
HinfI	GANTC	6 cut(s)	412, 456, 664, 692, 710, 1540
HpaII	CCGG	6 cut(s)	105, 125, 189, 195, 1046, 1229
HphI	GGTGA	3 cut(s)	283, 1459, 1633
Hpy166II	GTNNAC	7 cut(s)	178, 455, 874, 1034, 1054, 1133, 1686
Hpy188I	TCNGA	6 cut(s)	55, 76, 294, 624, 1243, 1257
Hpy8I	GTNNAC	7 cut(s)	178, 455, 874, 1034, 1054, 1133, 1686
Hpy99I	CGWCG	8 cut(s)	173, 179, 182, 218, 230, 298, 349, 739
HpyAV	CCTTC	4 cut(s)	220, 759, 907, 1016
HpyCH4III	ACNGT	4 cut(s)	1058, 1263, 1283, 1666
HpyCH4IV	ACGT	5 cut(s)	168, 324, 347, 685, 1123
HpyF10VI	GCNNNNNNNGC	9 cut(s)	36, 45, 98, 179, 310, 483, 802, 1711, 1745
HpyF3I	CTNAG	8 cut(s)	593, 621, 627, 1254, 1617, 1641, 1740, 1749
HpySE526I	ACGT	5 cut(s)	168, 324, 347, 685, 1123
Hsp92I	GRCGYC	3 cut(s)	168, 180, 1002
Hsp92II	CATG	8 cut(s)	406, 481, 859, 864, 900, 1294, 1306, 1399
HspAI	GCGC	4 cut(s)	30, 46, 243, 1653
Kpn2I	TCCGGA	1 cut(s)	1228
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	1 cut(s)	282
Kzo9I	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
LmnI	GCTCC	7 cut(s)	197, 425, 498, 640, 910, 1355, 1422
Lsp1109I	GCAGC	5 cut(s)	522, 571, 736, 1037, 1255
LweI	GCATC	1 cut(s)	1663
MabI	ACCWGGT	2 cut(s)	267, 448
MaeI	CTAG	2 cut(s)	206, 1547
MaeII	ACGT	5 cut(s)	168, 324, 347, 685, 1123
MaeIII	GTNAC	1 cut(s)	798
MalI	GATC	6 cut(s)	233, 255, 284, 1086, 1499, 1575
MboI	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	3 cut(s)	231, 1084, 1573
MlsI	TGGCCA	1 cut(s)	647
MluCI	AATT	5 cut(s)	355, 922, 1146, 1184, 1380
MluNI	TGGCCA	1 cut(s)	647
MlyI	GAGTC	2 cut(s)	450, 701
MmeI	TCCRAC	2 cut(s)	317, 358
Mox20I	TGGCCA	1 cut(s)	647
MroI	TCCGGA	1 cut(s)	1228
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	2 cut(s)	81, 917
MscI	TGGCCA	1 cut(s)	647
MseI	TTAA	2 cut(s)	35, 822
Msp20I	TGGCCA	1 cut(s)	647
MspA1I	CMGCKG	1 cut(s)	562
MspI	CCGG	6 cut(s)	105, 125, 189, 195, 1046, 1229
MspR9I	CCNGG	4 cut(s)	269, 450, 649, 1047
MunI	CAATTG	1 cut(s)	1146
MvaI	CCWGG	3 cut(s)	269, 450, 649
MvnI	CGCG	5 cut(s)	32, 46, 243, 582, 1653
MwoI	GCNNNNNNNGC	9 cut(s)	36, 45, 98, 179, 310, 483, 802, 1711, 1745
NaeI	GCCGGC	1 cut(s)	106
NciI	CCSGG	1 cut(s)	1047
NdeII	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
NgoMIV	GCCGGC	1 cut(s)	104
NheI	GCTAGC	1 cut(s)	1546
NlaIII	CATG	8 cut(s)	406, 481, 859, 864, 900, 1294, 1306, 1399
NlaIV	GGNNCC	3 cut(s)	193, 427, 551
NmuCI	GTSAC	1 cut(s)	798
NspI	RCATGY	2 cut(s)	864, 1306
PaeI	GCATGC	1 cut(s)	1306
PagI	TCATGA	1 cut(s)	855
PciI	ACATGT	1 cut(s)	860
PcsI	WCGNNNNNNNCGW	3 cut(s)	174, 222, 350
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	2 cut(s)	81, 917
PfeI	GAWTC	4 cut(s)	412, 664, 710, 1540
PflMI	CCANNNNNTGG	1 cut(s)	274
PkrI	GCNGC	9 cut(s)	103, 136, 184, 242, 537, 561, 726, 1027, 1270
PleI	GAGTC	2 cut(s)	450, 700
PpsI	GAGTC	2 cut(s)	450, 700
Ppu21I	YACGTR	2 cut(s)	686, 1124
PscI	ACATGT	1 cut(s)	860
Psp6I	CCWGG	3 cut(s)	267, 448, 647
PspGI	CCWGG	3 cut(s)	267, 448, 647
PspN4I	GGNNCC	3 cut(s)	193, 427, 551
PspPI	GGNCC	1 cut(s)	472
PstNI	CAGNNNCTG	1 cut(s)	1763
PsuI	RGATCY	3 cut(s)	231, 1084, 1573
PvuII	CAGCTG	1 cut(s)	562
RsaI	GTAC	2 cut(s)	684, 1101
RsaNI	GTAC	2 cut(s)	683, 1100
SalI	GTCGAC	1 cut(s)	176
SaqAI	TTAA	2 cut(s)	35, 822
SatI	GCNGC	9 cut(s)	102, 135, 183, 241, 536, 560, 725, 1026, 1269
Sau3AI	GATC	6 cut(s)	231, 253, 282, 1084, 1497, 1573
Sau96I	GGNCC	1 cut(s)	472
SchI	GAGTC	2 cut(s)	450, 701
ScrFI	CCNGG	4 cut(s)	269, 450, 649, 1047
SexAI	ACCWGGT	2 cut(s)	267, 448
SfaNI	GCATC	1 cut(s)	1663
SfcI	CTRYAG	1 cut(s)	1412
SgrDI	CGTCGACG	1 cut(s)	176
SinI	GGWCC	1 cut(s)	472
SmlI	CTYRAG	4 cut(s)	59, 764, 994, 1080
SmoI	CTYRAG	4 cut(s)	59, 764, 994, 1080
SphI	GCATGC	1 cut(s)	1306
Sse9I	AATT	5 cut(s)	355, 922, 1146, 1184, 1380
SspMI	CTAG	2 cut(s)	206, 1547
StyD4I	CCNGG	4 cut(s)	267, 448, 647, 1045
TaaI	ACNGT	4 cut(s)	1058, 1263, 1283, 1666
TaiI	ACGT	5 cut(s)	171, 327, 350, 688, 1126
TaqI	TCGA	4 cut(s)	111, 177, 228, 344
TasI	AATT	5 cut(s)	355, 922, 1146, 1184, 1380
TauI	GCSGC	4 cut(s)	104, 137, 185, 243
TfiI	GAWTC	4 cut(s)	412, 664, 710, 1540
Tru1I	TTAA	2 cut(s)	35, 822
Tru9I	TTAA	2 cut(s)	35, 822
TscAI	CASTG	4 cut(s)	394, 675, 1021, 1352
TseFI	GTSAC	1 cut(s)	798
TseI	GCWGC	5 cut(s)	535, 559, 724, 1025, 1268
Tsp45I	GTSAC	1 cut(s)	798
TspDTI	ATGAA	6 cut(s)	328, 419, 844, 962, 1640, 1749
TspGWI	ACGGA	3 cut(s)	438, 1316, 1472
TspRI	CASTG	4 cut(s)	394, 675, 1021, 1352
Van91I	CCANNNNNTGG	1 cut(s)	274
VpaK11BI	GGWCC	1 cut(s)	472
XapI	RAATTY	2 cut(s)	355, 1184
XceI	RCATGY	2 cut(s)	864, 1306
XmiI	GTMKAC	3 cut(s)	177, 454, 1132
XmnI	GAANNNNTTC	2 cut(s)	81, 917
XspI	CTAG	2 cut(s)	206, 1547
ZraI	GACGTC	1 cut(s)	169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.