Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005347

Physical Location & Seq

Genomic Coordinates Reverse (-)

1913614 .. 1917463

Gene Structure 3850 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g03480.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGACAGCGCGTTAAGCAACACGCGCTTCTCCGACCTCAAGCCTCCTCTCTCCGATCCGGTTCTCCAAGCCCTAACCGCCTCCGGCGTCGAATTCTGCACTCCGGTTCAAGCCGAAACAATCCCCTTGCTATGTAGCTTCAAGGACGTCGCCGTCGACGCCGCCACCGGCTCCGGCAAAACCCTAGCCTTCGTCGTCCCCCTCTTCGAGATCCTCCGCCGCGCTTCCACCAATCCCAAGCCTCACCAGGTGATGGGAATGATCATAGCTCCGACGAGAGAGCTCTCGTCGCAGATTTACGACGCAGCAAAGCAGTTCGTTTCGACGTCGCCGAATTTCAAGTGCGTGCTTTTGGTTGGAGGACGCCAAGTGAAAGCTGACATGCAGCGGATTCAGGAGGAAGGAGCCAATTTGCTGATCGGAACACCCGGTAGACTCTACGACATTATGGAACGTATGGATCGCTTGGATTTCCGGAGCTTTGAGATTTTGATTTTAGATGAGGCGGATAGGCTGTTGGATATGGGGTTCGAGAAGCAGCTGACTGGTATTATATCTCGCCTGCCAAAGCTGAGAAGAACTGGTCTTTTTTCAGCTACTCAGACTGAGGCAGTTGAGGAGCTGGCCAGGGCGGGGTTGAGGAATCCGGTGAGGGTTAAAGTGGTTGCGGAGTATATAACACCTTCGGGACTTTCCATTGAGTATATGGAATGCGACGCATACAAGAAGCCGTCGCAGCTTGTGGATATCCTTGTTAAGAATAAGTCTCAAAAGACCATGGTGTACTTCATGACTGGTGCTTGTGTTGACTACTGGAAAGTTGTTCTATCATGCCTCGCTCCCTTGAAGGATTTCAATCTGATTGCTATCCGTGGGAAGATGAAACAGAAAGCAAGGGACAAAGCTCTAGCCTCATTTGCATCTCTCTCAAGTGGCGTCCTTCTATGCACTGATGTTGCTGCCCGTGGACTTGACATTCCGGGTGTTGACTGTATAGTGCAGTATGATCCACCTCAAAAGCCTAATGATTTCGTACATAGAGTTGGCAGAACAGCACGTATGGGTAGACAAGGCAGTGCAATTGTTTTCCTGTTACCAAAGGAGGAAGCTTATGTGGAATTCCTGCGGAAAAAAGGAGTTCCTCTTCAAGAAAGGATATGTCCGGATGATGTCTCTGATGTTGTTCTTCAGCTACGATCTGCTGCAAGAAAAGACCGTGATATCATGGAAAAGGGCAAGCGGGCTTTGAAATCTTACGTCCGTGCTTATAAAAAACACGGCTGCTCCTACATTTTCAGGTGGAAAGAACTTGAACTTGGGAAGTTGGGCATGGGGTTTGGACTACTACGGCTCCCTGCAATGTCTGAGGTAAAACACAACACACTTTCCACGGAGGGTTTCACTCCTGTTGCAGACATCAACTTGGAGGAGATCAAATATAAGGACAAAGCTCGCGAGAAGCAAAGGAGGAAGAATCTGCTAGTGAAGAAAGAGGCAAAAGAGCAAGATCCTAAACCTCAAAAAACCAACAAAAATCCAAGTGCTGCAGCTAAGGTGACGAAGAAGAAAACAGCTAAGAAAAGAGGGGCTGAACAGACAGTTGAAGATGCTGATGAGTTGACGAGAGAATATCGCCTGCTAAAAAAGCTGAAAAAGGGGACTATTGATGAAGCTGAGTTTGCTATGATGACAGGAACTGAAAACTTACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003727 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008187 GO:0008266 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

571

Amino Acids

63.75

Weight (kDa)

9.43

Isoelectric Point (pI)

36.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	34 - 207	8.1e-42	DEAD/DEAH box helicase
ResIII	PF04851	48 - 192	1.5e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	243 - 355	3.3e-24	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	405 - 454	1.7e-17	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71280 AT1G71280 AT1G71370 AT5G05450
fragaria_vesca	FvH4_6g01590 FvH4_6g01590 FvH4_6g01590 FvH4_6g03480 FvH4_7g25130 FvH4_7g25130 FvH4_7g25130
malus_domestica	MD01G1158100.v1.1 MD07G1226800.v1.1
prunus_persica	Prupe.2G256400_v2.0.a1
pyrus_communis	pycom01g17480 pycom07g20540
rosa_chinensis	RchiOBHm_Chr1g0371021 RchiOBHm_Chr1g0371031
rosa_laevigata	RLG00000026991
rosa_multiflora	Rmu_co8450187.1_g000001 Rmu_sc0001018.1_g000027 Rmu_sc0003272.1_g000004
rosa_roxburghii	Rroxscaffold_4G00286030
rosa_rugosa	Rorug01G0360900
rosa_samantha	Rh1AG371200 Rh1BG334700 Rh1CG348000 Rh1DG365900
rosa_wichuraiana	Rw1G032650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1269
AasI	GACNNNNNNGTC	1 cut(s)	152
AatII	GACGTC	2 cut(s)	150, 329
AccB7I	CCANNNNNTGG	1 cut(s)	253
AccI	GTMKAC	3 cut(s)	156, 433, 1066
AccII	CGCG	4 cut(s)	11, 25, 222, 1455
AccIII	TCCGGA	2 cut(s)	474, 1162
AclWI	GGATC	5 cut(s)	50, 205, 468, 1001, 1502
AcoI	YGGCCR	1 cut(s)	624
AcsI	RAATTY	3 cut(s)	92, 334, 1118
AcuI	CTGAAG	1 cut(s)	1172
AcyI	GRCGYC	6 cut(s)	87, 147, 159, 326, 364, 936
AdeI	CACNNNGTG	1 cut(s)	250
AfaI	GTAC	2 cut(s)	785, 1035
AfiI	CCNNNNNNNGG	2 cut(s)	253, 633
AgsI	TTSAA	9 cut(s)	110, 142, 340, 847, 856, 1148, 1249, 1313, 1604
AjnI	CCWGG	2 cut(s)	246, 626
AjuI	GAANNNNNNNTTGG	2 cut(s)	1299, 1331
AloI	GAACNNNNNNTCC	2 cut(s)	512, 544
Alw21I	GWGCWC	1 cut(s)	285
Alw26I	GTCTC	2 cut(s)	771, 1177
AlwI	GGATC	5 cut(s)	50, 205, 468, 1001, 1502
AlwNI	CAGNNNCTG	1 cut(s)	1697
Aor13HI	TCCGGA	2 cut(s)	474, 1162
AoxI	GGCC	1 cut(s)	624
ApeKI	GCWGC	9 cut(s)	305, 385, 538, 736, 959, 1202, 1281, 1544, 1547
ApoI	RAATTY	3 cut(s)	92, 334, 1118
Asp700I	GAANNNNTTC	1 cut(s)	851
AspLEI	GCGC	3 cut(s)	11, 27, 224
AsuC2I	CCSGG	2 cut(s)	429, 981
AsuHPI	GGTGA	4 cut(s)	236, 262, 661, 1567
BalI	TGGCCA	1 cut(s)	626
BanII	GRGCYC	1 cut(s)	285
Bbv12I	GWGCWC	1 cut(s)	285
BbvI	GCAGC	9 cut(s)	317, 397, 550, 748, 946, 1189, 1268, 1531, 1559
BccI	CCATC	1 cut(s)	247
BceAI	ACGGC	4 cut(s)	137, 715, 1294, 1364
BciT130I	CCWGG	2 cut(s)	248, 628
BclI	TGATCA	1 cut(s)	261
BcnI	CCSGG	2 cut(s)	429, 981
BcoDI	GTCTC	2 cut(s)	771, 1177
BfaI	CTAG	3 cut(s)	185, 908, 1481
BfmI	CTRYAG	1 cut(s)	1545
Bme1390I	CCNGG	4 cut(s)	248, 429, 628, 981
BmiI	GGNNCC	3 cut(s)	172, 406, 1352
BmrFI	CCNGG	4 cut(s)	248, 429, 628, 981
BmsI	GCATC	2 cut(s)	929, 1597
Bpu10I	CCTNAGC	1 cut(s)	1551
BpuEI	CTTGAG	2 cut(s)	23, 913
BpuMI	CCSGG	2 cut(s)	429, 981
BsaAI	YACGTR	1 cut(s)	1058
BsaBI	GATNNNNATC	2 cut(s)	855, 866
BsaHI	GRCGYC	6 cut(s)	87, 147, 159, 326, 364, 936
BsaJI	CCNNGG	5 cut(s)	627, 777, 871, 964, 1389
BsaWI	WCCGGW	5 cut(s)	58, 103, 474, 646, 1162
BsaXI	ACNNNNNCTCC	4 cut(s)	1268, 1298, 1335, 1365
Bsc4I	CCNNNNNNNGG	2 cut(s)	253, 633
Bse118I	RCCGGY	1 cut(s)	167
Bse1I	ACTGG	4 cut(s)	550, 586, 799, 818
Bse3DI	GCAATG	1 cut(s)	1365
Bse8I	GATNNNNATC	2 cut(s)	855, 866
BseAI	TCCGGA	2 cut(s)	474, 1162
BseBI	CCWGG	2 cut(s)	248, 628
BseDI	CCNNGG	5 cut(s)	627, 777, 871, 964, 1389
BseGI	GGATG	1 cut(s)	1171
BseJI	GATNNNNATC	2 cut(s)	855, 866
BseLI	CCNNNNNNNGG	2 cut(s)	253, 633
BseMI	GCAATG	1 cut(s)	1365
BseMII	CTCAG	5 cut(s)	563, 597, 614, 1356, 1665
BseNI	ACTGG	4 cut(s)	550, 586, 799, 818
BseRI	GAGGAG	3 cut(s)	36, 632, 1442
BseXI	GCAGC	9 cut(s)	317, 397, 550, 748, 946, 1189, 1268, 1531, 1559
BsgI	GTGCAG	2 cut(s)	82, 1019
Bsh1236I	CGCG	4 cut(s)	11, 25, 222, 1455
BshFI	GGCC	1 cut(s)	626
BsiHKAI	GWGCWC	1 cut(s)	285
BslFI	GGGAC	4 cut(s)	182, 702, 911, 1672
BslI	CCNNNNNNNGG	2 cut(s)	253, 633
BsmAI	GTCTC	2 cut(s)	771, 1177
BsmFI	GGGAC	4 cut(s)	182, 702, 911, 1672
BsmI	GAATGC	1 cut(s)	716
BsnI	GGCC	1 cut(s)	626
Bsp1286I	GDGCHC	1 cut(s)	285
Bsp13I	TCCGGA	2 cut(s)	474, 1162
Bsp143I	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
Bsp19I	CCATGG	1 cut(s)	777
Bsp68I	TCGCGA	1 cut(s)	1455
BspANI	GGCC	1 cut(s)	626
BspCNI	CTCAG	5 cut(s)	564, 598, 613, 1357, 1666
BspEI	TCCGGA	2 cut(s)	474, 1162
BspFNI	CGCG	4 cut(s)	11, 25, 222, 1455
BspHI	TCATGA	1 cut(s)	789
BspLI	GGNNCC	3 cut(s)	172, 406, 1352
BspMAI	CTGCAG	1 cut(s)	1549
BspPI	GGATC	5 cut(s)	50, 205, 468, 1001, 1502
BsrDI	GCAATG	1 cut(s)	1365
BsrFI	RCCGGY	1 cut(s)	167
BsrI	ACTGG	4 cut(s)	550, 586, 799, 818
BssAI	RCCGGY	1 cut(s)	167
BssECI	CCNNGG	5 cut(s)	627, 777, 871, 964, 1389
BssMI	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
BssNI	GRCGYC	6 cut(s)	87, 147, 159, 326, 364, 936
BssT1I	CCWWGG	1 cut(s)	777
Bst2UI	CCWGG	2 cut(s)	248, 628
Bst4CI	ACNGT	3 cut(s)	992, 1217, 1600
Bst6I	CTCTTC	2 cut(s)	209, 1149
BstACI	GRCGYC	6 cut(s)	87, 147, 159, 326, 364, 936
BstBAI	YACGTR	1 cut(s)	1058
BstC8I	GCNNGC	7 cut(s)	347, 563, 624, 1238, 1242, 1453, 1637
BstDEI	CTNAG	7 cut(s)	572, 600, 606, 1365, 1551, 1575, 1674
BstDSI	CCRYGG	4 cut(s)	777, 871, 964, 1389
BstF5I	GGATG	1 cut(s)	1171
BstFNI	CGCG	4 cut(s)	11, 25, 222, 1455
BstHHI	GCGC	3 cut(s)	11, 27, 224
BstKTI	GATC	9 cut(s)	58, 213, 264, 420, 463, 1009, 1199, 1434, 1510
BstMAI	GTCTC	2 cut(s)	771, 1177
BstMBI	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
BstMWI	GCNNNNNNNGC	9 cut(s)	15, 24, 77, 158, 289, 736, 917, 1645, 1679
BstNI	CCWGG	2 cut(s)	248, 628
BstNSI	RCATGY	1 cut(s)	385
BstSCI	CCNGG	4 cut(s)	246, 427, 626, 979
BstSFI	CTRYAG	1 cut(s)	1545
BstUI	CGCG	4 cut(s)	11, 25, 222, 1455
BstV1I	GCAGC	9 cut(s)	317, 397, 550, 748, 946, 1189, 1268, 1531, 1559
BstX2I	RGATCY	2 cut(s)	210, 1507
BstYI	RGATCY	2 cut(s)	210, 1507
BsuRI	GGCC	1 cut(s)	626
BtgI	CCRYGG	4 cut(s)	777, 871, 964, 1389
BtsCI	GGATG	1 cut(s)	1171
BtsI	GCAGTG	1 cut(s)	1081
BtsIMutI	CAGTG	2 cut(s)	948, 1081
BtuMI	TCGCGA	1 cut(s)	1455
Cac8I	GCNNGC	7 cut(s)	347, 563, 624, 1238, 1242, 1453, 1637
CaiI	CAGNNNCTG	1 cut(s)	1697
CciI	TCATGA	1 cut(s)	789
CfoI	GCGC	3 cut(s)	11, 27, 224
Cfr10I	RCCGGY	1 cut(s)	167
CseI	GACGC	6 cut(s)	76, 167, 311, 372, 725, 925
CsiI	ACCWGGT	1 cut(s)	246
Csp6I	GTAC	2 cut(s)	784, 1034
CviAII	CATG	6 cut(s)	382, 778, 790, 831, 1225, 1330
CviQI	GTAC	2 cut(s)	784, 1034
DdeI	CTNAG	7 cut(s)	572, 600, 606, 1365, 1551, 1575, 1674
DpnI	GATC	9 cut(s)	57, 212, 263, 419, 462, 1008, 1198, 1433, 1509
DpnII	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
DraIII	CACNNNGTG	1 cut(s)	250
DrdI	GACNNNNNNGTC	1 cut(s)	152
DseDI	GACNNNNNNGTC	1 cut(s)	152
EaeI	YGGCCR	1 cut(s)	624
Eam1104I	CTCTTC	2 cut(s)	209, 1149
EarI	CTCTTC	2 cut(s)	209, 1149
EciI	GGCGGA	2 cut(s)	206, 521
Ecl136II	GAGCTC	1 cut(s)	283
Eco130I	CCWWGG	1 cut(s)	777
Eco24I	GRGCYC	1 cut(s)	285
Eco32I	GATATC	2 cut(s)	748, 1222
Eco53kI	GAGCTC	1 cut(s)	283
Eco57I	CTGAAG	1 cut(s)	1172
EcoICRI	GAGCTC	1 cut(s)	283
EcoRI	GAATTC	2 cut(s)	92, 1118
EcoRII	CCWGG	2 cut(s)	246, 626
EcoRV	GATATC	2 cut(s)	748, 1222
EcoT14I	CCWWGG	1 cut(s)	777
EcoT38I	GRGCYC	1 cut(s)	285
ErhI	CCWWGG	1 cut(s)	777
FaeI	CATG	6 cut(s)	385, 781, 793, 834, 1228, 1333
FaqI	GGGAC	4 cut(s)	182, 702, 911, 1672
FatI	CATG	6 cut(s)	381, 777, 789, 830, 1224, 1329
FauI	CCCGC	2 cut(s)	625, 1233
FbaI	TGATCA	1 cut(s)	261
FblI	GTMKAC	3 cut(s)	156, 433, 1066
FokI	GGATG	1 cut(s)	1178
FriOI	GRGCYC	1 cut(s)	285
FspBI	CTAG	3 cut(s)	185, 908, 1481
GlaI	GCGC	3 cut(s)	10, 26, 223
HaeIII	GGCC	1 cut(s)	626
HgaI	GACGC	6 cut(s)	76, 167, 311, 372, 725, 925
HhaI	GCGC	3 cut(s)	11, 27, 224
Hin1I	GRCGYC	6 cut(s)	87, 147, 159, 326, 364, 936
Hin1II	CATG	6 cut(s)	385, 781, 793, 834, 1228, 1333
Hin6I	GCGC	3 cut(s)	9, 25, 222
HinP1I	GCGC	3 cut(s)	9, 25, 222
HincII	GTYRAC	4 cut(s)	157, 808, 988, 1620
HindII	GTYRAC	4 cut(s)	157, 808, 988, 1620
HindIII	AAGCTT	1 cut(s)	1107
HinfI	GANTC	4 cut(s)	391, 435, 643, 1474
HphI	GGTGA	4 cut(s)	236, 262, 661, 1567
Hpy166II	GTNNAC	8 cut(s)	157, 434, 784, 808, 968, 988, 1067, 1620
Hpy188I	TCNGA	8 cut(s)	34, 55, 273, 422, 603, 861, 1177, 1366
Hpy188III	TCNNGA	9 cut(s)	208, 395, 475, 532, 687, 790, 1148, 1163, 1454
Hpy8I	GTNNAC	8 cut(s)	157, 434, 784, 808, 968, 988, 1067, 1620
HpyAV	CCTTC	5 cut(s)	199, 395, 693, 841, 950
HpyCH4III	ACNGT	3 cut(s)	992, 1217, 1600
HpyCH4IV	ACGT	5 cut(s)	147, 326, 454, 1057, 1257
HpyF10VI	GCNNNNNNNGC	9 cut(s)	15, 24, 77, 158, 289, 736, 917, 1645, 1679
HpyF3I	CTNAG	7 cut(s)	572, 600, 606, 1365, 1551, 1575, 1674
HpySE526I	ACGT	5 cut(s)	147, 326, 454, 1057, 1257
Hsp92I	GRCGYC	6 cut(s)	87, 147, 159, 326, 364, 936
Hsp92II	CATG	6 cut(s)	385, 781, 793, 834, 1228, 1333
HspAI	GCGC	3 cut(s)	9, 25, 222
Kpn2I	TCCGGA	2 cut(s)	474, 1162
Ksp22I	TGATCA	1 cut(s)	261
Kzo9I	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
LmnI	GCTCC	8 cut(s)	176, 274, 404, 477, 619, 844, 1289, 1356
Lsp1109I	GCAGC	9 cut(s)	317, 397, 550, 748, 946, 1189, 1268, 1531, 1559
LweI	GCATC	2 cut(s)	929, 1597
MabI	ACCWGGT	1 cut(s)	246
MaeI	CTAG	3 cut(s)	185, 908, 1481
MaeII	ACGT	5 cut(s)	147, 326, 454, 1057, 1257
MaeIII	GTNAC	2 cut(s)	1092, 1555
MalI	GATC	9 cut(s)	57, 212, 263, 419, 462, 1008, 1198, 1433, 1509
MboI	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
MfeI	CAATTG	1 cut(s)	1080
MflI	RGATCY	2 cut(s)	210, 1507
MhlI	GDGCHC	1 cut(s)	285
MlsI	TGGCCA	1 cut(s)	626
MluCI	AATT	5 cut(s)	92, 334, 409, 1080, 1118
MluNI	TGGCCA	1 cut(s)	626
MlyI	GAGTC	1 cut(s)	429
MmeI	TCCRAC	4 cut(s)	57, 296, 337, 498
Mox20I	TGGCCA	1 cut(s)	626
MroI	TCCGGA	2 cut(s)	474, 1162
MroXI	GAANNNNTTC	1 cut(s)	851
MscI	TGGCCA	1 cut(s)	626
MseI	TTAA	3 cut(s)	14, 657, 756
Msp20I	TGGCCA	1 cut(s)	626
MspA1I	CMGCKG	2 cut(s)	388, 541
MspR9I	CCNGG	4 cut(s)	248, 429, 628, 981
MunI	CAATTG	1 cut(s)	1080
Mva1269I	GAATGC	1 cut(s)	716
MvaI	CCWGG	2 cut(s)	248, 628
MvnI	CGCG	4 cut(s)	11, 25, 222, 1455
MwoI	GCNNNNNNNGC	9 cut(s)	15, 24, 77, 158, 289, 736, 917, 1645, 1679
NciI	CCSGG	2 cut(s)	429, 981
NcoI	CCATGG	1 cut(s)	777
NdeII	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
NlaIII	CATG	6 cut(s)	385, 781, 793, 834, 1228, 1333
NlaIV	GGNNCC	3 cut(s)	172, 406, 1352
NmuCI	GTSAC	1 cut(s)	1555
NruI	TCGCGA	1 cut(s)	1455
NspI	RCATGY	1 cut(s)	385
PagI	TCATGA	1 cut(s)	789
PcsI	WCGNNNNNNNCGW	2 cut(s)	153, 329
PctI	GAATGC	1 cut(s)	716
PdmI	GAANNNNTTC	1 cut(s)	851
PfeI	GAWTC	3 cut(s)	391, 643, 1474
PflMI	CCANNNNNTGG	1 cut(s)	253
PleI	GAGTC	1 cut(s)	429
PpsI	GAGTC	1 cut(s)	429
Ppu21I	YACGTR	1 cut(s)	1058
PsiI	TTATAA	1 cut(s)	1269
Psp124BI	GAGCTC	1 cut(s)	285
Psp6I	CCWGG	2 cut(s)	246, 626
PspGI	CCWGG	2 cut(s)	246, 626
PspN4I	GGNNCC	3 cut(s)	172, 406, 1352
PstI	CTGCAG	1 cut(s)	1549
PstNI	CAGNNNCTG	1 cut(s)	1697
PsuI	RGATCY	2 cut(s)	210, 1507
PvuII	CAGCTG	1 cut(s)	541
RruI	TCGCGA	1 cut(s)	1455
RsaI	GTAC	2 cut(s)	785, 1035
RsaNI	GTAC	2 cut(s)	784, 1034
SacI	GAGCTC	1 cut(s)	285
SalI	GTCGAC	1 cut(s)	155
SaqAI	TTAA	3 cut(s)	14, 657, 756
Sau3AI	GATC	9 cut(s)	55, 210, 261, 417, 460, 1006, 1196, 1431, 1507
SchI	GAGTC	1 cut(s)	429
ScrFI	CCNGG	4 cut(s)	248, 429, 628, 981
SduI	GDGCHC	1 cut(s)	285
SexAI	ACCWGGT	1 cut(s)	246
SfaNI	GCATC	2 cut(s)	929, 1597
SfcI	CTRYAG	1 cut(s)	1545
SgrDI	CGTCGACG	1 cut(s)	155
SmlI	CTYRAG	2 cut(s)	38, 928
SmoI	CTYRAG	2 cut(s)	38, 928
Sse9I	AATT	5 cut(s)	92, 334, 409, 1080, 1118
SspMI	CTAG	3 cut(s)	185, 908, 1481
SstI	GAGCTC	1 cut(s)	285
StyD4I	CCNGG	4 cut(s)	246, 427, 626, 979
StyI	CCWWGG	1 cut(s)	777
TaaI	ACNGT	3 cut(s)	992, 1217, 1600
TaiI	ACGT	5 cut(s)	150, 329, 457, 1060, 1260
TaqI	TCGA	5 cut(s)	90, 156, 207, 323, 531
TasI	AATT	5 cut(s)	92, 334, 409, 1080, 1118
TatI	WGTACW	1 cut(s)	783
TauI	GCSGC	2 cut(s)	164, 222
TfiI	GAWTC	3 cut(s)	391, 643, 1474
Tru1I	TTAA	3 cut(s)	14, 657, 756
Tru9I	TTAA	3 cut(s)	14, 657, 756
TscAI	CASTG	2 cut(s)	955, 1081
TseFI	GTSAC	1 cut(s)	1555
TseI	GCWGC	9 cut(s)	305, 385, 538, 736, 959, 1202, 1281, 1544, 1547
Tsp45I	GTSAC	1 cut(s)	1555
TspDTI	ATGAA	3 cut(s)	778, 896, 1683
TspGWI	ACGGA	3 cut(s)	860, 1250, 1406
TspRI	CASTG	2 cut(s)	955, 1081
Van91I	CCANNNNNTGG	1 cut(s)	253
XapI	RAATTY	3 cut(s)	92, 334, 1118
XceI	RCATGY	1 cut(s)	385
XcmI	CCANNNNNNNNNTGG	1 cut(s)	703
XmiI	GTMKAC	3 cut(s)	156, 433, 1066
XmnI	GAANNNNTTC	1 cut(s)	851
XspI	CTAG	3 cut(s)	185, 908, 1481
ZraI	GACGTC	2 cut(s)	148, 327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.