Nucleolar pre-ribosomal-associated protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72270 AT4G27010 AT4G27010 |
| fragaria_vesca | FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 |
| malus_domestica | MD03G1202300.v1.1 |
| prunus_persica | Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 |
| pyrus_communis | pycom03g15370 pycom03g15380 pycom03g15390 |
| rosa_chinensis | RchiOBHm_Chr5g0039261 |
| rosa_laevigata | RLG00000033900 RLG00000033902 |
| rosa_multiflora | Rmu_sc0000533.1_g000002 Rmu_sc0000533.1_g000003 Rmu_ssc0000410.1_g000046 |
| rosa_roxburghii | Rroxscaffold_1G00040450 Rroxscaffold_1G00041880 |
| rosa_rugosa | Rorug05G0177300 |
| rosa_samantha | Rh5AG264000 Rh5BG268900 Rh5CG301900 Rh5DG276600 |
| rosa_wichuraiana | Rw5G024750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4401 |
| AarI | CACCTGC | 2 cut(s) | 4268, 5263 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 6542 |
| Acc36I | ACCTGC | 4 cut(s) | 3465, 4268, 5263, 5845 |
| Acc65I | GGTACC | 1 cut(s) | 6761 |
| AccB1I | GGYRCC | 2 cut(s) | 469, 6761 |
| AccBSI | CCGCTC | 2 cut(s) | 1288, 3076 |
| AccI | GTMKAC | 7 cut(s) | 623, 922, 1938, 2134, 3971, 4173, 5319 |
| AccII | CGCG | 2 cut(s) | 5983, 6879 |
| AccIII | TCCGGA | 2 cut(s) | 2117, 2200 |
| AclI | AACGTT | 2 cut(s) | 361, 2969 |
| AcuI | CTGAAG | 8 cut(s) | 3893, 5046, 5367, 5583, 5663, 6471, 6477, 6540 |
| AflIII | ACRYGT | 2 cut(s) | 2129, 7005 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 2130, 4059, 4165 |
| AhlI | ACTAGT | 1 cut(s) | 4115 |
| AjiI | CACGTC | 2 cut(s) | 407, 6340 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3659, 3691, 4765, 4797 |
| AleI | CACNNNNGTG | 1 cut(s) | 4116 |
| Alw21I | GWGCWC | 7 cut(s) | 158, 289, 685, 5164, 6311, 6345, 6636 |
| Alw44I | GTGCAC | 1 cut(s) | 6341 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 881 |
| Ama87I | CYCGRG | 7 cut(s) | 179, 1670, 2937, 3839, 4241, 5423, 6749 |
| Aor13HI | TCCGGA | 2 cut(s) | 2117, 2200 |
| AoxI | GGCC | 8 cut(s) | 580, 759, 3663, 3914, 4736, 5889, 6745, 7194 |
| ApaLI | GTGCAC | 1 cut(s) | 6341 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2135, 2167 |
| AseI | ATTAAT | 3 cut(s) | 2696, 3215, 6302 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 268, 2360, 2374, 3135, 3960, 4091, 4885 |
| Asp718I | GGTACC | 1 cut(s) | 6761 |
| AspLEI | GCGC | 3 cut(s) | 3766, 5985, 6881 |
| AsuC2I | CCSGG | 1 cut(s) | 2750 |
| AvaI | CYCGRG | 7 cut(s) | 179, 1670, 2937, 3839, 4241, 5423, 6749 |
| AvaII | GGWCC | 8 cut(s) | 410, 692, 1096, 1341, 1999, 2834, 3085, 6535 |
| AxyI | CCTNAGG | 1 cut(s) | 3089 |
| BaeGI | GKGCMC | 2 cut(s) | 2868, 6345 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 7106, 7139 |
| BamHI | GGATCC | 2 cut(s) | 4313, 6371 |
| BanI | GGYRCC | 2 cut(s) | 469, 6761 |
| BanII | GRGCYC | 3 cut(s) | 158, 289, 3311 |
| BbsI | GAAGAC | 6 cut(s) | 597, 1714, 3429, 4001, 4595, 5373 |
| Bbv12I | GWGCWC | 7 cut(s) | 158, 289, 685, 5164, 6311, 6345, 6636 |
| BbvCI | CCTCAGC | 2 cut(s) | 1217, 5648 |
| BceAI | ACGGC | 1 cut(s) | 1770 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 6257, 6291, 6730, 6764 |
| BciVI | GTATCC | 2 cut(s) | 1510, 1657 |
| BclI | TGATCA | 1 cut(s) | 3778 |
| BcnI | CCSGG | 1 cut(s) | 2750 |
| BcuI | ACTAGT | 1 cut(s) | 4115 |
| BfmI | CTRYAG | 8 cut(s) | 873, 1859, 1939, 2841, 3749, 5196, 5852, 6756 |
| BfuAI | ACCTGC | 4 cut(s) | 3465, 4268, 5263, 5845 |
| BfuI | GTATCC | 2 cut(s) | 1510, 1657 |
| BglII | AGATCT | 6 cut(s) | 2772, 4385, 5107, 5389, 6053, 6794 |
| BmcAI | AGTACT | 1 cut(s) | 4640 |
| Bme18I | GGWCC | 8 cut(s) | 410, 692, 1096, 1341, 1999, 2834, 3085, 6535 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 2130, 4059, 4165 |
| BmeT110I | CYCGRG | 7 cut(s) | 179, 1670, 2937, 3839, 4241, 5423, 6749 |
| BmgBI | CACGTC | 2 cut(s) | 407, 6340 |
| BmiI | GGNNCC | 7 cut(s) | 471, 694, 3086, 4315, 4442, 6373, 6763 |
| BmrI | ACTGGG | 3 cut(s) | 1530, 2882, 5417 |
| BmuI | ACTGGG | 3 cut(s) | 1530, 2882, 5417 |
| BpiI | GAAGAC | 6 cut(s) | 597, 1714, 3429, 4001, 4595, 5373 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 4851, 4883, 5234, 5266 |
| BpmI | CTGGAG | 7 cut(s) | 4287, 4562, 4729, 5988, 6010, 6862, 7169 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1217, 5480, 5648 |
| BpuEI | CTTGAG | 7 cut(s) | 605, 1304, 1878, 5465, 5810, 6246, 6568 |
| BpuMI | CCSGG | 1 cut(s) | 2750 |
| BsaAI | YACGTR | 2 cut(s) | 4028, 5496 |
| BsaBI | GATNNNNATC | 1 cut(s) | 6118 |
| BsaWI | WCCGGW | 3 cut(s) | 2117, 2200, 6835 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2205, 2235 |
| Bse21I | CCTNAGG | 1 cut(s) | 3089 |
| Bse3DI | GCAATG | 4 cut(s) | 1787, 3634, 4376, 6748 |
| Bse8I | GATNNNNATC | 1 cut(s) | 6118 |
| BseAI | TCCGGA | 2 cut(s) | 2117, 2200 |
| BseJI | GATNNNNATC | 1 cut(s) | 6118 |
| BseMI | GCAATG | 4 cut(s) | 1787, 3634, 4376, 6748 |
| BseRI | GAGGAG | 6 cut(s) | 2229, 3074, 4436, 4523, 5808, 6249 |
| BseSI | GKGCMC | 2 cut(s) | 2868, 6345 |
| BsgI | GTGCAG | 2 cut(s) | 2963, 6297 |
| Bsh1236I | CGCG | 2 cut(s) | 5983, 6879 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1626 |
| BshFI | GGCC | 8 cut(s) | 582, 761, 3665, 3916, 4738, 5891, 6747, 7196 |
| BshNI | GGYRCC | 2 cut(s) | 469, 6761 |
| BsiEI | CGRYCG | 1 cut(s) | 1626 |
| BsiHKAI | GWGCWC | 7 cut(s) | 158, 289, 685, 5164, 6311, 6345, 6636 |
| BsiHKCI | CYCGRG | 7 cut(s) | 179, 1670, 2937, 3839, 4241, 5423, 6749 |
| BsiSI | CCGG | 4 cut(s) | 2118, 2201, 2750, 6836 |
| BslFI | GGGAC | 6 cut(s) | 1204, 1792, 2898, 3098, 3681, 5082 |
| BsmBI | CGTCTC | 1 cut(s) | 1205 |
| BsmFI | GGGAC | 6 cut(s) | 1204, 1792, 2898, 3098, 3681, 5082 |
| BsmI | GAATGC | 4 cut(s) | 376, 2113, 2537, 4749 |
| BsnI | GGCC | 8 cut(s) | 582, 761, 3665, 3916, 4738, 5891, 6747, 7196 |
| BsoBI | CYCGRG | 7 cut(s) | 179, 1670, 2937, 3839, 4241, 5423, 6749 |
| Bsp1286I | GDGCHC | 9 cut(s) | 158, 289, 685, 2868, 3311, 5164, 6311, 6345, 6636 |
| Bsp13I | TCCGGA | 2 cut(s) | 2117, 2200 |
| Bsp1407I | TGTACA | 2 cut(s) | 785, 2730 |
| Bsp19I | CCATGG | 1 cut(s) | 5313 |
| BspANI | GGCC | 8 cut(s) | 582, 761, 3665, 3916, 4738, 5891, 6747, 7196 |
| BspEI | TCCGGA | 2 cut(s) | 2117, 2200 |
| BspFNI | CGCG | 2 cut(s) | 5983, 6879 |
| BspHI | TCATGA | 4 cut(s) | 855, 1107, 1725, 5668 |
| BspLI | GGNNCC | 7 cut(s) | 471, 694, 3086, 4315, 4442, 6373, 6763 |
| BspMAI | CTGCAG | 4 cut(s) | 1863, 2845, 5200, 5856 |
| BspMI | ACCTGC | 4 cut(s) | 3465, 4268, 5263, 5845 |
| BspQI | GCTCTTC | 3 cut(s) | 277, 854, 2717 |
| BspT107I | GGYRCC | 2 cut(s) | 469, 6761 |
| BsrBI | CCGCTC | 2 cut(s) | 1288, 3076 |
| BsrDI | GCAATG | 4 cut(s) | 1787, 3634, 4376, 6748 |
| BsrGI | TGTACA | 2 cut(s) | 785, 2730 |
| BssNAI | GTATAC | 1 cut(s) | 5320 |
| BssT1I | CCWWGG | 2 cut(s) | 5313, 6610 |
| Bst1107I | GTATAC | 1 cut(s) | 5320 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 43, 2863 |
| BstAUI | TGTACA | 2 cut(s) | 785, 2730 |
| BstBAI | YACGTR | 2 cut(s) | 4028, 5496 |
| BstDSI | CCRYGG | 2 cut(s) | 5313, 6962 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 6401 |
| BstFNI | CGCG | 2 cut(s) | 5983, 6879 |
| BstHHI | GCGC | 3 cut(s) | 3766, 5985, 6881 |
| BstMCI | CGRYCG | 1 cut(s) | 1626 |
| BstNSI | RCATGY | 5 cut(s) | 2133, 3474, 4504, 5471, 7009 |
| BstSFI | CTRYAG | 8 cut(s) | 873, 1859, 1939, 2841, 3749, 5196, 5852, 6756 |
| BstSLI | GKGCMC | 2 cut(s) | 2868, 6345 |
| BstSNI | TACGTA | 2 cut(s) | 4028, 5496 |
| BstUI | CGCG | 2 cut(s) | 5983, 6879 |
| BstV2I | GAAGAC | 6 cut(s) | 597, 1714, 3429, 4001, 4595, 5373 |
| BstZ17I | GTATAC | 1 cut(s) | 5320 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3089 |
| BsuI | GTATCC | 2 cut(s) | 1510, 1657 |
| BsuRI | GGCC | 8 cut(s) | 582, 761, 3665, 3916, 4738, 5891, 6747, 7196 |
| BtgI | CCRYGG | 2 cut(s) | 5313, 6962 |
| BtgZI | GCGATG | 1 cut(s) | 642 |
| BtrI | CACGTC | 2 cut(s) | 407, 6340 |
| BtsI | GCAGTG | 1 cut(s) | 5367 |
| BveI | ACCTGC | 4 cut(s) | 3465, 4268, 5263, 5845 |
| CaiI | CAGNNNCTG | 1 cut(s) | 881 |
| CciI | TCATGA | 4 cut(s) | 855, 1107, 1725, 5668 |
| CfoI | GCGC | 3 cut(s) | 3766, 5985, 6881 |
| CseI | GACGC | 2 cut(s) | 128, 1222 |
| DraI | TTTAAA | 4 cut(s) | 1425, 1815, 3250, 4266 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 6542 |
| DriI | GACNNNNNGTC | 3 cut(s) | 2130, 4059, 4165 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 6542 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 2130, 4059, 4165 |
| EciI | GGCGGA | 1 cut(s) | 3357 |
| Ecl136II | GAGCTC | 2 cut(s) | 156, 287 |
| Eco105I | TACGTA | 2 cut(s) | 4028, 5496 |
| Eco130I | CCWWGG | 2 cut(s) | 5313, 6610 |
| Eco147I | AGGCCT | 2 cut(s) | 582, 4738 |
| Eco24I | GRGCYC | 3 cut(s) | 158, 289, 3311 |
| Eco32I | GATATC | 5 cut(s) | 1294, 2689, 3985, 4987, 6168 |
| Eco47I | GGWCC | 8 cut(s) | 410, 692, 1096, 1341, 1999, 2834, 3085, 6535 |
| Eco53kI | GAGCTC | 2 cut(s) | 156, 287 |
| Eco57I | CTGAAG | 8 cut(s) | 3893, 5046, 5367, 5583, 5663, 6471, 6477, 6540 |
| Eco81I | CCTNAGG | 1 cut(s) | 3089 |
| Eco88I | CYCGRG | 7 cut(s) | 179, 1670, 2937, 3839, 4241, 5423, 6749 |
| EcoICRI | GAGCTC | 2 cut(s) | 156, 287 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 6401 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3085 |
| EcoRI | GAATTC | 1 cut(s) | 4408 |
| EcoRV | GATATC | 5 cut(s) | 1294, 2689, 3985, 4987, 6168 |
| EcoT14I | CCWWGG | 2 cut(s) | 5313, 6610 |
| EcoT22I | ATGCAT | 6 cut(s) | 820, 1118, 4260, 4983, 5469, 6335 |
| EcoT38I | GRGCYC | 3 cut(s) | 158, 289, 3311 |
| ErhI | CCWWGG | 2 cut(s) | 5313, 6610 |
| Esp3I | CGTCTC | 1 cut(s) | 1205 |
| FaqI | GGGAC | 6 cut(s) | 1204, 1792, 2898, 3098, 3681, 5082 |
| FauI | CCCGC | 4 cut(s) | 471, 1281, 2923, 2974 |
| FauNDI | CATATG | 1 cut(s) | 1118 |
| FbaI | TGATCA | 1 cut(s) | 3778 |
| FblI | GTMKAC | 7 cut(s) | 623, 922, 1938, 2134, 3971, 4173, 5319 |
| FriOI | GRGCYC | 3 cut(s) | 158, 289, 3311 |
| GlaI | GCGC | 3 cut(s) | 3765, 5984, 6880 |
| GsuI | CTGGAG | 7 cut(s) | 4287, 4562, 4729, 5988, 6010, 6862, 7169 |
| HaeIII | GGCC | 8 cut(s) | 582, 761, 3665, 3916, 4738, 5891, 6747, 7196 |
| HapII | CCGG | 4 cut(s) | 2118, 2201, 2750, 6836 |
| HgaI | GACGC | 2 cut(s) | 128, 1222 |
| HhaI | GCGC | 3 cut(s) | 3766, 5985, 6881 |
| Hin6I | GCGC | 3 cut(s) | 3764, 5983, 6879 |
| HinP1I | GCGC | 3 cut(s) | 3764, 5983, 6879 |
| HincII | GTYRAC | 8 cut(s) | 1264, 1536, 2135, 2762, 3582, 3972, 5695, 5952 |
| HindII | GTYRAC | 8 cut(s) | 1264, 1536, 2135, 2762, 3582, 3972, 5695, 5952 |
| HindIII | AAGCTT | 3 cut(s) | 71, 2816, 6509 |
| HpaI | GTTAAC | 1 cut(s) | 5695 |
| HpaII | CCGG | 4 cut(s) | 2118, 2201, 2750, 6836 |
| Hpy99I | CGWCG | 2 cut(s) | 3976, 5084 |
| HspAI | GCGC | 3 cut(s) | 3764, 5983, 6879 |
| Kpn2I | TCCGGA | 2 cut(s) | 2117, 2200 |
| KpnI | GGTACC | 1 cut(s) | 6765 |
| Ksp22I | TGATCA | 1 cut(s) | 3778 |
| KspAI | GTTAAC | 1 cut(s) | 5695 |
| LguI | GCTCTTC | 3 cut(s) | 277, 854, 2717 |
| LmnI | GCTCC | 7 cut(s) | 1662, 1805, 3196, 3344, 4423, 4510, 6631 |
| MbiI | CCGCTC | 2 cut(s) | 1288, 3076 |
| MfeI | CAATTG | 3 cut(s) | 38, 1788, 1827 |
| MhlI | GDGCHC | 9 cut(s) | 158, 289, 685, 2868, 3311, 5164, 6311, 6345, 6636 |
| Mph1103I | ATGCAT | 6 cut(s) | 820, 1118, 4260, 4983, 5469, 6335 |
| MroI | TCCGGA | 2 cut(s) | 2117, 2200 |
| MroXI | GAANNNNTTC | 7 cut(s) | 268, 2360, 2374, 3135, 3960, 4091, 4885 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1990, 2245, 3567, 4116, 4722, 6338 |
| MspA1I | CMGCKG | 3 cut(s) | 2918, 2981, 5561 |
| MspI | CCGG | 4 cut(s) | 2118, 2201, 2750, 6836 |
| MunI | CAATTG | 3 cut(s) | 38, 1788, 1827 |
| Mva1269I | GAATGC | 4 cut(s) | 376, 2113, 2537, 4749 |
| MvnI | CGCG | 2 cut(s) | 5983, 6879 |
| NciI | CCSGG | 1 cut(s) | 2750 |
| NcoI | CCATGG | 1 cut(s) | 5313 |
| NdeI | CATATG | 1 cut(s) | 1118 |
| NlaIV | GGNNCC | 7 cut(s) | 471, 694, 3086, 4315, 4442, 6373, 6763 |
| NmeAIII | GCCGAG | 1 cut(s) | 649 |
| NmuCI | GTSAC | 5 cut(s) | 2924, 3594, 3755, 6392, 6619 |
| NsiI | ATGCAT | 6 cut(s) | 820, 1118, 4260, 4983, 5469, 6335 |
| NspI | RCATGY | 5 cut(s) | 2133, 3474, 4504, 5471, 7009 |
| OliI | CACNNNNGTG | 1 cut(s) | 4116 |
| PaeI | GCATGC | 1 cut(s) | 3474 |
| PaeR7I | CTCGAG | 4 cut(s) | 179, 2937, 3839, 6749 |
| PagI | TCATGA | 4 cut(s) | 855, 1107, 1725, 5668 |
| PaqCI | CACCTGC | 2 cut(s) | 4268, 5263 |
| PasI | CCCWGGG | 1 cut(s) | 891 |
| PceI | AGGCCT | 2 cut(s) | 582, 4738 |
| PciI | ACATGT | 2 cut(s) | 2129, 7005 |
| PciSI | GCTCTTC | 3 cut(s) | 277, 854, 2717 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1623, 7118 |
| PctI | GAATGC | 4 cut(s) | 376, 2113, 2537, 4749 |
| PdmI | GAANNNNTTC | 7 cut(s) | 268, 2360, 2374, 3135, 3960, 4091, 4885 |
| PflFI | GACNNNGTC | 1 cut(s) | 408 |
| PfoI | TCCNGGA | 2 cut(s) | 1659, 4539 |
| Ppu21I | YACGTR | 2 cut(s) | 4028, 5496 |
| PpuMI | RGGWCCY | 1 cut(s) | 3085 |
| PscI | ACATGT | 2 cut(s) | 2129, 7005 |
| PshBI | ATTAAT | 3 cut(s) | 2696, 3215, 6302 |
| PsiI | TTATAA | 1 cut(s) | 4401 |
| Psp124BI | GAGCTC | 2 cut(s) | 158, 289 |
| Psp1406I | AACGTT | 2 cut(s) | 361, 2969 |
| Psp5II | RGGWCCY | 1 cut(s) | 3085 |
| PspN4I | GGNNCC | 7 cut(s) | 471, 694, 3086, 4315, 4442, 6373, 6763 |
| PspPPI | RGGWCCY | 1 cut(s) | 3085 |
| PspXI | VCTCGAGB | 1 cut(s) | 2937 |
| PstI | CTGCAG | 4 cut(s) | 1863, 2845, 5200, 5856 |
| PstNI | CAGNNNCTG | 1 cut(s) | 881 |
| PsyI | GACNNNGTC | 1 cut(s) | 408 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1990, 2245, 3567, 4116, 4722, 6338 |
| SacI | GAGCTC | 2 cut(s) | 158, 289 |
| SalI | GTCGAC | 2 cut(s) | 2133, 3970 |
| SapI | GCTCTTC | 3 cut(s) | 277, 854, 2717 |
| SbfI | CCTGCAGG | 1 cut(s) | 5856 |
| ScaI | AGTACT | 1 cut(s) | 4640 |
| SdaI | CCTGCAGG | 1 cut(s) | 5856 |
| SduI | GDGCHC | 9 cut(s) | 158, 289, 685, 2868, 3311, 5164, 6311, 6345, 6636 |
| SfcI | CTRYAG | 8 cut(s) | 873, 1859, 1939, 2841, 3749, 5196, 5852, 6756 |
| Sfr274I | CTCGAG | 4 cut(s) | 179, 2937, 3839, 6749 |
| SinI | GGWCC | 8 cut(s) | 410, 692, 1096, 1341, 1999, 2834, 3085, 6535 |
| SlaI | CTCGAG | 4 cut(s) | 179, 2937, 3839, 6749 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1990, 2245, 3567, 4116, 4722, 6338 |
| SnaBI | TACGTA | 2 cut(s) | 4028, 5496 |
| SpeI | ACTAGT | 1 cut(s) | 4115 |
| SphI | GCATGC | 1 cut(s) | 3474 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 5856 |
| SseBI | AGGCCT | 2 cut(s) | 582, 4738 |
| SspI | AATATT | 3 cut(s) | 52, 4189, 4436 |
| SstI | GAGCTC | 2 cut(s) | 158, 289 |
| StuI | AGGCCT | 2 cut(s) | 582, 4738 |
| StyI | CCWWGG | 2 cut(s) | 5313, 6610 |
| TaqII | GACCGA | 1 cut(s) | 1612 |
| TatI | WGTACW | 4 cut(s) | 785, 2730, 4638, 5299 |
| TauI | GCSGC | 1 cut(s) | 377 |
| TseFI | GTSAC | 5 cut(s) | 2924, 3594, 3755, 6392, 6619 |
| Tsp45I | GTSAC | 5 cut(s) | 2924, 3594, 3755, 6392, 6619 |
| TspGWI | ACGGA | 4 cut(s) | 2328, 2426, 4774, 5860 |
| Tth111I | GACNNNGTC | 1 cut(s) | 408 |
| VneI | GTGCAC | 1 cut(s) | 6341 |
| VpaK11BI | GGWCC | 8 cut(s) | 410, 692, 1096, 1341, 1999, 2834, 3085, 6535 |
| VspI | ATTAAT | 3 cut(s) | 2696, 3215, 6302 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 6401 |
| XbaI | TCTAGA | 2 cut(s) | 4628, 6806 |
| XceI | RCATGY | 5 cut(s) | 2133, 3474, 4504, 5471, 7009 |
| XhoI | CTCGAG | 4 cut(s) | 179, 2937, 3839, 6749 |
| XmiI | GTMKAC | 7 cut(s) | 623, 922, 1938, 2134, 3971, 4173, 5319 |
| XmnI | GAANNNNTTC | 7 cut(s) | 268, 2360, 2374, 3135, 3960, 4091, 4885 |
| ZrmI | AGTACT | 1 cut(s) | 4640 |
| Zsp2I | ATGCAT | 6 cut(s) | 820, 1118, 4260, 4983, 5469, 6335 |