Nucleolar pre-ribosomal-associated protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72270 AT4G27010 AT4G27010 |
| fragaria_vesca | FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 |
| malus_domestica | MD03G1202300.v1.1 |
| prunus_persica | Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 |
| pyrus_communis | pycom03g15370 pycom03g15380 pycom03g15390 |
| rosa_chinensis | RchiOBHm_Chr5g0039261 |
| rosa_laevigata | RLG00000033900 RLG00000033902 |
| rosa_multiflora | Rmu_sc0000533.1_g000002 Rmu_sc0000533.1_g000003 Rmu_ssc0000410.1_g000046 |
| rosa_roxburghii | Rroxscaffold_1G00040450 Rroxscaffold_1G00041880 |
| rosa_rugosa | Rorug05G0177300 |
| rosa_samantha | Rh5AG264000 Rh5BG268900 Rh5CG301900 Rh5DG276600 |
| rosa_wichuraiana | Rw5G024750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2387 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 131 |
| AccI | GTMKAC | 2 cut(s) | 1868, 2062 |
| AciI | CCGC | 2 cut(s) | 1103, 1992 |
| AclWI | GGATC | 3 cut(s) | 1492, 2090, 2756 |
| AcoI | YGGCCR | 1 cut(s) | 1219 |
| AcsI | RAATTY | 7 cut(s) | 181, 1316, 1658, 2011, 2027, 2144, 2393 |
| AcuI | CTGAAG | 4 cut(s) | 65, 2087, 2224, 2562 |
| AfaI | GTAC | 4 cut(s) | 984, 1336, 2006, 2617 |
| AflIII | ACRYGT | 2 cut(s) | 221, 1378 |
| AgeI | ACCGGT | 1 cut(s) | 2274 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 875 |
| AjiI | CACGTC | 1 cut(s) | 2470 |
| AjnI | CCWGG | 1 cut(s) | 523 |
| Alw21I | GWGCWC | 1 cut(s) | 791 |
| Alw26I | GTCTC | 4 cut(s) | 109, 448, 1839, 1957 |
| AlwI | GGATC | 3 cut(s) | 1492, 2090, 2756 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2585 |
| Ama87I | CYCGRG | 1 cut(s) | 2172 |
| AoxI | GGCC | 3 cut(s) | 170, 506, 1219 |
| ApeKI | GCWGC | 7 cut(s) | 36, 650, 659, 1229, 1531, 1534, 1994 |
| ApoI | RAATTY | 7 cut(s) | 181, 1316, 1658, 2011, 2027, 2144, 2393 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1208, 1240 |
| AsiGI | ACCGGT | 1 cut(s) | 2274 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 396, 2096, 2276 |
| AsuHPI | GGTGA | 2 cut(s) | 134, 335 |
| AvaI | CYCGRG | 1 cut(s) | 2172 |
| BaeGI | GKGCMC | 1 cut(s) | 1881 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 32, 65, 974, 1007 |
| BauI | CACGAG | 1 cut(s) | 609 |
| BbsI | GAAGAC | 2 cut(s) | 1086, 2195 |
| Bbv12I | GWGCWC | 1 cut(s) | 791 |
| BbvI | GCAGC | 7 cut(s) | 48, 637, 646, 1241, 1543, 1546, 1981 |
| BccI | CCATC | 6 cut(s) | 409, 719, 1930, 2170, 2681, 2789 |
| BceAI | ACGGC | 2 cut(s) | 419, 1234 |
| BciT130I | CCWGG | 1 cut(s) | 525 |
| BclI | TGATCA | 2 cut(s) | 211, 1321 |
| BcoDI | GTCTC | 4 cut(s) | 109, 448, 1839, 1957 |
| BfaI | CTAG | 8 cut(s) | 147, 333, 485, 914, 1100, 1824, 2124, 2720 |
| BfmI | CTRYAG | 1 cut(s) | 1776 |
| BglII | AGATCT | 1 cut(s) | 631 |
| BisI | GCNGC | 7 cut(s) | 37, 651, 660, 1230, 1532, 1535, 1995 |
| BlsI | GCNGC | 7 cut(s) | 38, 652, 661, 1231, 1533, 1536, 1996 |
| Bme1390I | CCNGG | 1 cut(s) | 525 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 875 |
| BmeT110I | CYCGRG | 1 cut(s) | 2172 |
| BmgBI | CACGTC | 1 cut(s) | 2470 |
| BmrFI | CCNGG | 1 cut(s) | 525 |
| BmsI | GCATC | 6 cut(s) | 61, 307, 565, 1061, 2504, 2621 |
| BpiI | GAAGAC | 2 cut(s) | 1086, 2195 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2166, 2198 |
| Bpu10I | CCTNAGC | 1 cut(s) | 271 |
| BpuEI | CTTGAG | 2 cut(s) | 305, 398 |
| Bsa29I | ATCGAT | 1 cut(s) | 2789 |
| BsaWI | WCCGGW | 2 cut(s) | 2274, 2672 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 911, 941 |
| Bse118I | RCCGGY | 1 cut(s) | 2274 |
| Bse1I | ACTGG | 4 cut(s) | 393, 489, 546, 2511 |
| Bse3DI | GCAATG | 8 cut(s) | 1047, 1219, 1491, 1792, 1936, 2265, 2490, 2561 |
| BseBI | CCWGG | 1 cut(s) | 525 |
| BseCI | ATCGAT | 1 cut(s) | 2789 |
| BseMI | GCAATG | 8 cut(s) | 1047, 1219, 1491, 1792, 1936, 2265, 2490, 2561 |
| BseMII | CTCAG | 4 cut(s) | 77, 114, 774, 2197 |
| BseNI | ACTGG | 4 cut(s) | 393, 489, 546, 2511 |
| BseSI | GKGCMC | 1 cut(s) | 1881 |
| BseXI | GCAGC | 7 cut(s) | 48, 637, 646, 1241, 1543, 1546, 1981 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2789 |
| BshFI | GGCC | 3 cut(s) | 172, 508, 1221 |
| BshTI | ACCGGT | 1 cut(s) | 2274 |
| BshVI | ATCGAT | 1 cut(s) | 2789 |
| BsiEI | CGRYCG | 1 cut(s) | 2789 |
| BsiHKAI | GWGCWC | 1 cut(s) | 791 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2172 |
| BsiSI | CCGG | 2 cut(s) | 2275, 2673 |
| BslFI | GGGAC | 2 cut(s) | 1343, 2558 |
| BsmAI | GTCTC | 4 cut(s) | 109, 448, 1839, 1957 |
| BsmFI | GGGAC | 2 cut(s) | 1343, 2558 |
| BsmI | GAATGC | 1 cut(s) | 2526 |
| BsnI | GGCC | 3 cut(s) | 172, 508, 1221 |
| BsoBI | CYCGRG | 1 cut(s) | 2172 |
| Bsp1286I | GDGCHC | 2 cut(s) | 791, 1881 |
| Bsp143I | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| BspACI | CCGC | 2 cut(s) | 1103, 1992 |
| BspANI | GGCC | 3 cut(s) | 172, 508, 1221 |
| BspCNI | CTCAG | 4 cut(s) | 76, 113, 775, 2196 |
| BspDI | ATCGAT | 1 cut(s) | 2789 |
| BspHI | TCATGA | 1 cut(s) | 1300 |
| BspPI | GGATC | 3 cut(s) | 1492, 2090, 2756 |
| BspQI | GCTCTTC | 1 cut(s) | 1935 |
| BsrDI | GCAATG | 8 cut(s) | 1047, 1219, 1491, 1792, 1936, 2265, 2490, 2561 |
| BsrFI | RCCGGY | 1 cut(s) | 2274 |
| BsrI | ACTGG | 4 cut(s) | 393, 489, 546, 2511 |
| BssAI | RCCGGY | 1 cut(s) | 2274 |
| BssMI | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| BssNAI | GTATAC | 1 cut(s) | 2063 |
| BssSI | CACGAG | 1 cut(s) | 609 |
| Bst1107I | GTATAC | 1 cut(s) | 2063 |
| Bst2BI | CACGAG | 1 cut(s) | 609 |
| Bst2UI | CCWGG | 1 cut(s) | 525 |
| Bst4CI | ACNGT | 6 cut(s) | 128, 852, 894, 939, 1598, 1976 |
| Bst6I | CTCTTC | 4 cut(s) | 1575, 1842, 1935, 2105 |
| BstC8I | GCNNGC | 3 cut(s) | 1676, 1992, 2461 |
| BstDEI | CTNAG | 7 cut(s) | 63, 100, 271, 498, 783, 1338, 2183 |
| BstKTI | GATC | 8 cut(s) | 214, 634, 1324, 1487, 2085, 2764, 2789, 2793 |
| BstMAI | GTCTC | 4 cut(s) | 109, 448, 1839, 1957 |
| BstMBI | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| BstMCI | CGRYCG | 1 cut(s) | 2789 |
| BstNI | CCWGG | 1 cut(s) | 525 |
| BstNSI | RCATGY | 3 cut(s) | 225, 1382, 1717 |
| BstSCI | CCNGG | 1 cut(s) | 523 |
| BstSFI | CTRYAG | 1 cut(s) | 1776 |
| BstSLI | GKGCMC | 1 cut(s) | 1881 |
| BstV1I | GCAGC | 7 cut(s) | 48, 637, 646, 1241, 1543, 1546, 1981 |
| BstV2I | GAAGAC | 2 cut(s) | 1086, 2195 |
| BstX2I | RGATCY | 3 cut(s) | 631, 1484, 2761 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2506 |
| BstYI | RGATCY | 3 cut(s) | 631, 1484, 2761 |
| BstZ17I | GTATAC | 1 cut(s) | 2063 |
| Bsu15I | ATCGAT | 1 cut(s) | 2789 |
| BsuRI | GGCC | 3 cut(s) | 172, 508, 1221 |
| BsuTUI | ATCGAT | 1 cut(s) | 2789 |
| BtrI | CACGTC | 1 cut(s) | 2470 |
| BtsI | GCAGTG | 2 cut(s) | 1081, 2470 |
| BtsIMutI | CAGTG | 7 cut(s) | 21, 41, 496, 1081, 1603, 2111, 2470 |
| Cac8I | GCNNGC | 3 cut(s) | 1676, 1992, 2461 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2585 |
| CciI | TCATGA | 1 cut(s) | 1300 |
| Cfr10I | RCCGGY | 1 cut(s) | 2274 |
| ClaI | ATCGAT | 1 cut(s) | 2789 |
| CseI | GACGC | 1 cut(s) | 809 |
| Csp6I | GTAC | 4 cut(s) | 983, 1335, 2005, 2616 |
| CspAI | ACCGGT | 1 cut(s) | 2274 |
| CviQI | GTAC | 4 cut(s) | 983, 1335, 2005, 2616 |
| DdeI | CTNAG | 7 cut(s) | 63, 100, 271, 498, 783, 1338, 2183 |
| DpnI | GATC | 8 cut(s) | 213, 633, 1323, 1486, 2084, 2763, 2788, 2792 |
| DpnII | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| DraI | TTTAAA | 2 cut(s) | 177, 1651 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 131 |
| DriI | GACNNNNNGTC | 1 cut(s) | 875 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 131 |
| EaeI | YGGCCR | 1 cut(s) | 1219 |
| Eam1104I | CTCTTC | 4 cut(s) | 1575, 1842, 1935, 2105 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 875 |
| EarI | CTCTTC | 4 cut(s) | 1575, 1842, 1935, 2105 |
| Eco147I | AGGCCT | 1 cut(s) | 172 |
| Eco32I | GATATC | 2 cut(s) | 21, 2409 |
| Eco57I | CTGAAG | 4 cut(s) | 65, 2087, 2224, 2562 |
| Eco88I | CYCGRG | 1 cut(s) | 2172 |
| EcoRI | GAATTC | 1 cut(s) | 2011 |
| EcoRII | CCWGG | 1 cut(s) | 523 |
| EcoRV | GATATC | 2 cut(s) | 21, 2409 |
| EcoT22I | ATGCAT | 1 cut(s) | 1331 |
| FaqI | GGGAC | 2 cut(s) | 1343, 2558 |
| FauI | CCCGC | 1 cut(s) | 1999 |
| FauNDI | CATATG | 2 cut(s) | 28, 1558 |
| FbaI | TGATCA | 2 cut(s) | 211, 1321 |
| FblI | GTMKAC | 2 cut(s) | 1868, 2062 |
| Fnu4HI | GCNGC | 7 cut(s) | 37, 651, 660, 1230, 1532, 1535, 1995 |
| Fsp4HI | GCNGC | 7 cut(s) | 37, 651, 660, 1230, 1532, 1535, 1995 |
| FspBI | CTAG | 8 cut(s) | 147, 333, 485, 914, 1100, 1824, 2124, 2720 |
| GluI | GCNGC | 7 cut(s) | 37, 651, 660, 1230, 1532, 1535, 1995 |
| HaeIII | GGCC | 3 cut(s) | 172, 508, 1221 |
| HapII | CCGG | 2 cut(s) | 2275, 2673 |
| HgaI | GACGC | 1 cut(s) | 809 |
| HincII | GTYRAC | 2 cut(s) | 880, 1594 |
| HindII | GTYRAC | 2 cut(s) | 880, 1594 |
| HindIII | AAGCTT | 1 cut(s) | 2282 |
| HinfI | GANTC | 8 cut(s) | 373, 956, 962, 1291, 1387, 2372, 2510, 2571 |
| HpaII | CCGG | 2 cut(s) | 2275, 2673 |
| HphI | GGTGA | 2 cut(s) | 134, 335 |
| Hpy166II | GTNNAC | 8 cut(s) | 566, 880, 1203, 1256, 1594, 1869, 1900, 2063 |
| Hpy8I | GTNNAC | 8 cut(s) | 566, 880, 1203, 1256, 1594, 1869, 1900, 2063 |
| HpyAV | CCTTC | 7 cut(s) | 491, 1177, 1919, 2028, 2111, 2316, 2586 |
| HpyCH4III | ACNGT | 6 cut(s) | 128, 852, 894, 939, 1598, 1976 |
| HpyCH4IV | ACGT | 1 cut(s) | 2469 |
| HpyF3I | CTNAG | 7 cut(s) | 63, 100, 271, 498, 783, 1338, 2183 |
| HpySE526I | ACGT | 1 cut(s) | 2469 |
| Ksp22I | TGATCA | 2 cut(s) | 211, 1321 |
| Kzo9I | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| LguI | GCTCTTC | 1 cut(s) | 1935 |
| Lsp1109I | GCAGC | 7 cut(s) | 48, 637, 646, 1241, 1543, 1546, 1981 |
| LweI | GCATC | 6 cut(s) | 61, 307, 565, 1061, 2504, 2621 |
| MaeI | CTAG | 8 cut(s) | 147, 333, 485, 914, 1100, 1824, 2124, 2720 |
| MaeII | ACGT | 1 cut(s) | 2469 |
| MaeIII | GTNAC | 7 cut(s) | 122, 323, 623, 1190, 1598, 2313, 2465 |
| MalI | GATC | 8 cut(s) | 213, 633, 1323, 1486, 2084, 2763, 2788, 2792 |
| MboI | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| MfeI | CAATTG | 2 cut(s) | 792, 2726 |
| MflI | RGATCY | 3 cut(s) | 631, 1484, 2761 |
| MhlI | GDGCHC | 2 cut(s) | 791, 1881 |
| MlyI | GAGTC | 2 cut(s) | 382, 2580 |
| MmeI | TCCRAC | 3 cut(s) | 847, 876, 2789 |
| MnlI | CCTC | 9 cut(s) | 162, 280, 373, 554, 605, 755, 976, 1603, 1963 |
| Mph1103I | ATGCAT | 1 cut(s) | 1331 |
| MroXI | GAANNNNTTC | 3 cut(s) | 396, 2096, 2276 |
| MseI | TTAA | 8 cut(s) | 176, 1275, 1623, 1650, 2289, 2378, 2565, 2697 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2540, 2651 |
| MspA1I | CMGCKG | 1 cut(s) | 1994 |
| MspI | CCGG | 2 cut(s) | 2275, 2673 |
| MspR9I | CCNGG | 1 cut(s) | 525 |
| MunI | CAATTG | 2 cut(s) | 792, 2726 |
| Mva1269I | GAATGC | 1 cut(s) | 2526 |
| MvaI | CCWGG | 1 cut(s) | 525 |
| NdeI | CATATG | 2 cut(s) | 28, 1558 |
| NdeII | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| NmuCI | GTSAC | 6 cut(s) | 122, 323, 1190, 1598, 2313, 2465 |
| NsiI | ATGCAT | 1 cut(s) | 1331 |
| NspI | RCATGY | 3 cut(s) | 225, 1382, 1717 |
| PaeR7I | CTCGAG | 1 cut(s) | 2172 |
| PagI | TCATGA | 1 cut(s) | 1300 |
| PceI | AGGCCT | 1 cut(s) | 172 |
| PciI | ACATGT | 2 cut(s) | 221, 1378 |
| PciSI | GCTCTTC | 1 cut(s) | 1935 |
| PctI | GAATGC | 1 cut(s) | 2526 |
| PdmI | GAANNNNTTC | 3 cut(s) | 396, 2096, 2276 |
| PfeI | GAWTC | 6 cut(s) | 956, 962, 1291, 1387, 2372, 2510 |
| PinAI | ACCGGT | 1 cut(s) | 2274 |
| PkrI | GCNGC | 7 cut(s) | 38, 652, 661, 1231, 1533, 1536, 1996 |
| Ple19I | CGATCG | 1 cut(s) | 2789 |
| PleI | GAGTC | 2 cut(s) | 381, 2579 |
| PpsI | GAGTC | 2 cut(s) | 381, 2579 |
| PscI | ACATGT | 2 cut(s) | 221, 1378 |
| PsiI | TTATAA | 1 cut(s) | 2387 |
| Psp6I | CCWGG | 1 cut(s) | 523 |
| PspGI | CCWGG | 1 cut(s) | 523 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2585 |
| PsuI | RGATCY | 3 cut(s) | 631, 1484, 2761 |
| PvuI | CGATCG | 1 cut(s) | 2789 |
| RsaI | GTAC | 4 cut(s) | 984, 1336, 2006, 2617 |
| RsaNI | GTAC | 4 cut(s) | 983, 1335, 2005, 2616 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2540, 2651 |
| SapI | GCTCTTC | 1 cut(s) | 1935 |
| SaqAI | TTAA | 8 cut(s) | 176, 1275, 1623, 1650, 2289, 2378, 2565, 2697 |
| SatI | GCNGC | 7 cut(s) | 37, 651, 660, 1230, 1532, 1535, 1995 |
| Sau3AI | GATC | 8 cut(s) | 211, 631, 1321, 1484, 2082, 2761, 2786, 2790 |
| SchI | GAGTC | 2 cut(s) | 382, 2580 |
| ScrFI | CCNGG | 1 cut(s) | 525 |
| SduI | GDGCHC | 2 cut(s) | 791, 1881 |
| SfaNI | GCATC | 6 cut(s) | 61, 307, 565, 1061, 2504, 2621 |
| SfcI | CTRYAG | 1 cut(s) | 1776 |
| Sfr274I | CTCGAG | 1 cut(s) | 2172 |
| SlaI | CTCGAG | 1 cut(s) | 2172 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2540, 2651 |
| SmlI | CTYRAG | 3 cut(s) | 284, 377, 2172 |
| SmoI | CTYRAG | 3 cut(s) | 284, 377, 2172 |
| SseBI | AGGCCT | 1 cut(s) | 172 |
| SsiI | CCGC | 2 cut(s) | 1103, 1992 |
| SspI | AATATT | 2 cut(s) | 462, 1749 |
| SspMI | CTAG | 8 cut(s) | 147, 333, 485, 914, 1100, 1824, 2124, 2720 |
| StuI | AGGCCT | 1 cut(s) | 172 |
| StyD4I | CCNGG | 1 cut(s) | 523 |
| TaaI | ACNGT | 6 cut(s) | 128, 852, 894, 939, 1598, 1976 |
| TaiI | ACGT | 1 cut(s) | 2472 |
| TaqI | TCGA | 5 cut(s) | 1170, 1441, 1754, 2173, 2789 |
| TaqII | GACCGA | 1 cut(s) | 2436 |
| TfiI | GAWTC | 6 cut(s) | 956, 962, 1291, 1387, 2372, 2510 |
| Tru1I | TTAA | 8 cut(s) | 176, 1275, 1623, 1650, 2289, 2378, 2565, 2697 |
| Tru9I | TTAA | 8 cut(s) | 176, 1275, 1623, 1650, 2289, 2378, 2565, 2697 |
| TscAI | CASTG | 7 cut(s) | 21, 48, 496, 1081, 1603, 2111, 2470 |
| TseFI | GTSAC | 6 cut(s) | 122, 323, 1190, 1598, 2313, 2465 |
| TseI | GCWGC | 7 cut(s) | 36, 650, 659, 1229, 1531, 1534, 1994 |
| Tsp45I | GTSAC | 6 cut(s) | 122, 323, 1190, 1598, 2313, 2465 |
| TspGWI | ACGGA | 2 cut(s) | 1923, 2284 |
| TspRI | CASTG | 7 cut(s) | 21, 48, 496, 1081, 1603, 2111, 2470 |
| XapI | RAATTY | 7 cut(s) | 181, 1316, 1658, 2011, 2027, 2144, 2393 |
| XbaI | TCTAGA | 1 cut(s) | 2123 |
| XceI | RCATGY | 3 cut(s) | 225, 1382, 1717 |
| XhoI | CTCGAG | 1 cut(s) | 2172 |
| XmiI | GTMKAC | 2 cut(s) | 1868, 2062 |
| XmnI | GAANNNNTTC | 3 cut(s) | 396, 2096, 2276 |
| XspI | CTAG | 8 cut(s) | 147, 333, 485, 914, 1100, 1824, 2124, 2720 |
| Zsp2I | ATGCAT | 1 cut(s) | 1331 |