Nucleolar pre-ribosomal-associated protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72270 AT4G27010 AT4G27010 |
| fragaria_vesca | FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 |
| malus_domestica | MD03G1202300.v1.1 |
| prunus_persica | Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 |
| pyrus_communis | pycom03g15370 pycom03g15380 pycom03g15390 |
| rosa_chinensis | RchiOBHm_Chr5g0039261 |
| rosa_laevigata | RLG00000033900 RLG00000033902 |
| rosa_multiflora | Rmu_sc0000533.1_g000002 Rmu_sc0000533.1_g000003 Rmu_ssc0000410.1_g000046 |
| rosa_roxburghii | Rroxscaffold_1G00040450 Rroxscaffold_1G00041880 |
| rosa_rugosa | Rorug05G0177300 |
| rosa_samantha | Rh5AG264000 Rh5BG268900 Rh5CG301900 Rh5DG276600 |
| rosa_wichuraiana | Rw5G024750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 188 |
| Acc16I | TGCGCA | 1 cut(s) | 5555 |
| Acc36I | ACCTGC | 2 cut(s) | 3132, 7412 |
| AccB1I | GGYRCC | 2 cut(s) | 3046, 5270 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 959, 5791, 7479 |
| AccBSI | CCGCTC | 2 cut(s) | 1281, 5647 |
| AccI | GTMKAC | 6 cut(s) | 1483, 4053, 4223, 4267, 6133, 6897 |
| AccII | CGCG | 2 cut(s) | 412, 5759 |
| AccIII | TCCGGA | 1 cut(s) | 1528 |
| AcoI | YGGCCR | 1 cut(s) | 873 |
| AcvI | CACGTG | 1 cut(s) | 5180 |
| AcyI | GRCGYC | 1 cut(s) | 533 |
| AdeI | CACNNNGTG | 1 cut(s) | 1994 |
| AfeI | AGCGCT | 1 cut(s) | 2643 |
| AflII | CTTAAG | 2 cut(s) | 95, 1031 |
| AflIII | ACRYGT | 5 cut(s) | 1405, 2394, 5179, 6071, 6385 |
| AhlI | ACTAGT | 1 cut(s) | 4259 |
| AjiI | CACGTC | 1 cut(s) | 7198 |
| AjnI | CCWGG | 3 cut(s) | 2133, 2884, 4989 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2696, 2728 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 7193, 7225 |
| Alw21I | GWGCWC | 4 cut(s) | 257, 1755, 1868, 4211 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 4649, 5837, 7046 |
| Ama87I | CYCGRG | 1 cut(s) | 6692 |
| Aor13HI | TCCGGA | 1 cut(s) | 1528 |
| Aor51HI | AGCGCT | 1 cut(s) | 2643 |
| AoxI | GGCC | 9 cut(s) | 602, 873, 961, 2295, 2531, 2867, 5282, 6934, 7282 |
| AseI | ATTAAT | 4 cut(s) | 3948, 4094, 4533, 5571 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 2119, 2213, 2216, 3626, 4518, 6157, 6468 |
| AspS9I | GGNCC | 4 cut(s) | 1628, 2296, 3089, 7282 |
| AsuC2I | CCSGG | 3 cut(s) | 297, 684, 2100 |
| AsuII | TTCGAA | 1 cut(s) | 1447 |
| AvaI | CYCGRG | 1 cut(s) | 6692 |
| AvaII | GGWCC | 2 cut(s) | 1628, 3089 |
| AxyI | CCTNAGG | 1 cut(s) | 2292 |
| BaeGI | GKGCMC | 2 cut(s) | 4236, 6961 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 3200, 3233, 4773, 4806, 6332, 6365 |
| BalI | TGGCCA | 1 cut(s) | 875 |
| BamHI | GGATCC | 2 cut(s) | 7201, 7446 |
| BanI | GGYRCC | 2 cut(s) | 3046, 5270 |
| BanII | GRGCYC | 4 cut(s) | 1212, 1805, 3108, 4211 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5472, 5504 |
| BauI | CACGAG | 2 cut(s) | 4464, 4658 |
| BbrPI | CACGTG | 1 cut(s) | 5180 |
| BbsI | GAAGAC | 9 cut(s) | 1580, 2381, 2665, 2789, 3441, 4535, 5493, 6074, 7385 |
| Bbv12I | GWGCWC | 4 cut(s) | 257, 1755, 1868, 4211 |
| BceAI | ACGGC | 5 cut(s) | 722, 2177, 2518, 4363, 4486 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4731, 4765 |
| BciT130I | CCWGG | 3 cut(s) | 2135, 2886, 4991 |
| BciVI | GTATCC | 4 cut(s) | 792, 1272, 4079, 6333 |
| BclI | TGATCA | 4 cut(s) | 2953, 3676, 5049, 5842 |
| BcnI | CCSGG | 3 cut(s) | 297, 684, 2100 |
| BcuI | ACTAGT | 1 cut(s) | 4259 |
| BfoI | RGCGCY | 4 cut(s) | 478, 491, 683, 2645 |
| BfrI | CTTAAG | 2 cut(s) | 95, 1031 |
| BfuAI | ACCTGC | 2 cut(s) | 3132, 7412 |
| BfuI | GTATCC | 4 cut(s) | 792, 1272, 4079, 6333 |
| BglII | AGATCT | 2 cut(s) | 1675, 7308 |
| BlpI | GCTNAGC | 3 cut(s) | 16, 471, 2613 |
| BmcAI | AGTACT | 2 cut(s) | 2044, 3551 |
| Bme1390I | CCNGG | 6 cut(s) | 297, 684, 2100, 2135, 2886, 4991 |
| Bme18I | GGWCC | 2 cut(s) | 1628, 3089 |
| BmeT110I | CYCGRG | 1 cut(s) | 6692 |
| BmgBI | CACGTC | 1 cut(s) | 7198 |
| BmgT120I | GGNCC | 4 cut(s) | 1628, 2296, 3089, 7282 |
| BmiI | GGNNCC | 9 cut(s) | 822, 1211, 2298, 3048, 4820, 5272, 7203, 7283, 7448 |
| BmrFI | CCNGG | 6 cut(s) | 297, 684, 2100, 2135, 2886, 4991 |
| BpiI | GAAGAC | 9 cut(s) | 1580, 2381, 2665, 2789, 3441, 4535, 5493, 6074, 7385 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1078, 1110, 3251, 3283, 6946, 6978 |
| BpmI | CTGGAG | 6 cut(s) | 231, 689, 3316, 5675, 6322, 6948 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1829 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 16, 471, 2613 |
| Bpu14I | TTCGAA | 1 cut(s) | 1447 |
| BpuEI | CTTGAG | 6 cut(s) | 1343, 1406, 1492, 1703, 2666, 6431 |
| BpuMI | CCSGG | 3 cut(s) | 297, 684, 2100 |
| BsaAI | YACGTR | 2 cut(s) | 2395, 5180 |
| BsaHI | GRCGYC | 1 cut(s) | 533 |
| BsaI | GGTCTC | 5 cut(s) | 1081, 1392, 1908, 4442, 4753 |
| BsaWI | WCCGGW | 1 cut(s) | 1528 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2668, 2698 |
| Bse118I | RCCGGY | 1 cut(s) | 170 |
| Bse1I | ACTGG | 9 cut(s) | 1270, 1795, 2050, 3333, 4812, 6573, 7026, 7187, 7191 |
| Bse21I | CCTNAGG | 1 cut(s) | 2292 |
| Bse3DI | GCAATG | 8 cut(s) | 663, 785, 3574, 4024, 4147, 4285, 4913, 6684 |
| BseAI | TCCGGA | 1 cut(s) | 1528 |
| BseBI | CCWGG | 3 cut(s) | 2135, 2886, 4991 |
| BseMI | GCAATG | 8 cut(s) | 663, 785, 3574, 4024, 4147, 4285, 4913, 6684 |
| BseNI | ACTGG | 9 cut(s) | 1270, 1795, 2050, 3333, 4812, 6573, 7026, 7187, 7191 |
| BseRI | GAGGAG | 4 cut(s) | 773, 2707, 4676, 4855 |
| BseSI | GKGCMC | 2 cut(s) | 4236, 6961 |
| BseYI | CCCAGC | 3 cut(s) | 742, 1213, 2559 |
| BsgI | GTGCAG | 3 cut(s) | 1122, 1259, 1698 |
| Bsh1236I | CGCG | 2 cut(s) | 412, 5759 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1041, 3215 |
| BshFI | GGCC | 9 cut(s) | 604, 875, 963, 2297, 2533, 2869, 5284, 6936, 7284 |
| BshNI | GGYRCC | 2 cut(s) | 3046, 5270 |
| BsiEI | CGRYCG | 2 cut(s) | 1041, 3215 |
| BsiHKAI | GWGCWC | 4 cut(s) | 257, 1755, 1868, 4211 |
| BsiHKCI | CYCGRG | 1 cut(s) | 6692 |
| BsiSI | CCGG | 6 cut(s) | 171, 283, 296, 683, 1529, 2099 |
| BslFI | GGGAC | 5 cut(s) | 2368, 4668, 4910, 4968, 6802 |
| BsmBI | CGTCTC | 2 cut(s) | 1098, 6590 |
| BsmFI | GGGAC | 5 cut(s) | 2368, 4668, 4910, 4968, 6802 |
| BsmI | GAATGC | 4 cut(s) | 3626, 4594, 5295, 5354 |
| BsnI | GGCC | 9 cut(s) | 604, 875, 963, 2297, 2533, 2869, 5284, 6936, 7284 |
| Bso31I | GGTCTC | 5 cut(s) | 1081, 1392, 1908, 4442, 4753 |
| BsoBI | CYCGRG | 1 cut(s) | 6692 |
| Bsp119I | TTCGAA | 1 cut(s) | 1447 |
| Bsp1286I | GDGCHC | 9 cut(s) | 257, 1212, 1755, 1805, 1868, 3108, 4211, 4236, 6961 |
| Bsp13I | TCCGGA | 1 cut(s) | 1528 |
| Bsp1407I | TGTACA | 3 cut(s) | 1944, 2729, 3221 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 16, 471, 2613 |
| Bsp19I | CCATGG | 2 cut(s) | 6545, 7438 |
| BspANI | GGCC | 9 cut(s) | 604, 875, 963, 2297, 2533, 2869, 5284, 6936, 7284 |
| BspEI | TCCGGA | 1 cut(s) | 1528 |
| BspFNI | CGCG | 2 cut(s) | 412, 5759 |
| BspHI | TCATGA | 4 cut(s) | 106, 1248, 3352, 4477 |
| BspLI | GGNNCC | 9 cut(s) | 822, 1211, 2298, 3048, 4820, 5272, 7203, 7283, 7448 |
| BspMAI | CTGCAG | 7 cut(s) | 570, 913, 1863, 2281, 2322, 6184, 6348 |
| BspMI | ACCTGC | 2 cut(s) | 3132, 7412 |
| BspQI | GCTCTTC | 1 cut(s) | 5103 |
| BspT104I | TTCGAA | 1 cut(s) | 1447 |
| BspT107I | GGYRCC | 2 cut(s) | 3046, 5270 |
| BspTI | CTTAAG | 2 cut(s) | 95, 1031 |
| BspTNI | GGTCTC | 5 cut(s) | 1081, 1392, 1908, 4442, 4753 |
| BsrBI | CCGCTC | 2 cut(s) | 1281, 5647 |
| BsrDI | GCAATG | 8 cut(s) | 663, 785, 3574, 4024, 4147, 4285, 4913, 6684 |
| BsrFI | RCCGGY | 1 cut(s) | 170 |
| BsrGI | TGTACA | 3 cut(s) | 1944, 2729, 3221 |
| BsrI | ACTGG | 9 cut(s) | 1270, 1795, 2050, 3333, 4812, 6573, 7026, 7187, 7191 |
| BssAI | RCCGGY | 1 cut(s) | 170 |
| BssNAI | GTATAC | 2 cut(s) | 4054, 6134 |
| BssNI | GRCGYC | 1 cut(s) | 533 |
| BssSI | CACGAG | 2 cut(s) | 4464, 4658 |
| BssT1I | CCWWGG | 6 cut(s) | 1907, 3522, 5952, 6459, 6545, 7438 |
| Bst1107I | GTATAC | 2 cut(s) | 4054, 6134 |
| Bst2BI | CACGAG | 2 cut(s) | 4464, 4658 |
| Bst2UI | CCWGG | 3 cut(s) | 2135, 2886, 4991 |
| Bst6I | CTCTTC | 9 cut(s) | 452, 1110, 1495, 4197, 5103, 6163, 6242, 6564, 7299 |
| BstACI | GRCGYC | 1 cut(s) | 533 |
| BstAFI | CTTAAG | 2 cut(s) | 95, 1031 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 5137, 7046 |
| BstAUI | TGTACA | 3 cut(s) | 1944, 2729, 3221 |
| BstBAI | YACGTR | 2 cut(s) | 2395, 5180 |
| BstBI | TTCGAA | 1 cut(s) | 1447 |
| BstC8I | GCNNGC | 6 cut(s) | 740, 1208, 1454, 3735, 4031, 7261 |
| BstDSI | CCRYGG | 3 cut(s) | 1197, 6545, 7438 |
| BstEII | GGTNACC | 1 cut(s) | 3449 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 5278 |
| BstFNI | CGCG | 2 cut(s) | 412, 5759 |
| BstH2I | RGCGCY | 4 cut(s) | 478, 491, 683, 2645 |
| BstMCI | CGRYCG | 2 cut(s) | 1041, 3215 |
| BstNI | CCWGG | 3 cut(s) | 2135, 2886, 4991 |
| BstNSI | RCATGY | 7 cut(s) | 1409, 3737, 5588, 5855, 6075, 6389, 7272 |
| BstPI | GGTNACC | 1 cut(s) | 3449 |
| BstSCI | CCNGG | 6 cut(s) | 295, 682, 2098, 2133, 2884, 4989 |
| BstSLI | GKGCMC | 2 cut(s) | 4236, 6961 |
| BstUI | CGCG | 2 cut(s) | 412, 5759 |
| BstV2I | GAAGAC | 9 cut(s) | 1580, 2381, 2665, 2789, 3441, 4535, 5493, 6074, 7385 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1795, 2996, 7198 |
| BstZ17I | GTATAC | 2 cut(s) | 4054, 6134 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2292 |
| BsuI | GTATCC | 4 cut(s) | 792, 1272, 4079, 6333 |
| BsuRI | GGCC | 9 cut(s) | 604, 875, 963, 2297, 2533, 2869, 5284, 6936, 7284 |
| BtgI | CCRYGG | 3 cut(s) | 1197, 6545, 7438 |
| BtrI | CACGTC | 1 cut(s) | 7198 |
| BtsI | GCAGTG | 3 cut(s) | 1868, 5626, 7377 |
| BveI | ACCTGC | 2 cut(s) | 3132, 7412 |
| Cac8I | GCNNGC | 6 cut(s) | 740, 1208, 1454, 3735, 4031, 7261 |
| CaiI | CAGNNNCTG | 3 cut(s) | 4649, 5837, 7046 |
| CciI | TCATGA | 4 cut(s) | 106, 1248, 3352, 4477 |
| Cfr10I | RCCGGY | 1 cut(s) | 170 |
| Cfr13I | GGNCC | 4 cut(s) | 1628, 2296, 3089, 7282 |
| CseI | GACGC | 3 cut(s) | 522, 5748, 5885 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 7252, 7287 |
| DraI | TTTAAA | 3 cut(s) | 1002, 1389, 7230 |
| DraIII | CACNNNGTG | 1 cut(s) | 1994 |
| EaeI | YGGCCR | 1 cut(s) | 873 |
| Eam1104I | CTCTTC | 9 cut(s) | 452, 1110, 1495, 4197, 5103, 6163, 6242, 6564, 7299 |
| EarI | CTCTTC | 9 cut(s) | 452, 1110, 1495, 4197, 5103, 6163, 6242, 6564, 7299 |
| EciI | GGCGGA | 1 cut(s) | 1629 |
| Ecl136II | GAGCTC | 1 cut(s) | 4209 |
| Eco130I | CCWWGG | 6 cut(s) | 1907, 3522, 5952, 6459, 6545, 7438 |
| Eco147I | AGGCCT | 1 cut(s) | 5284 |
| Eco24I | GRGCYC | 4 cut(s) | 1212, 1805, 3108, 4211 |
| Eco31I | GGTCTC | 5 cut(s) | 1081, 1392, 1908, 4442, 4753 |
| Eco32I | GATATC | 3 cut(s) | 2385, 3984, 6570 |
| Eco47I | GGWCC | 2 cut(s) | 1628, 3089 |
| Eco47III | AGCGCT | 1 cut(s) | 2643 |
| Eco53kI | GAGCTC | 1 cut(s) | 4209 |
| Eco72I | CACGTG | 1 cut(s) | 5180 |
| Eco81I | CCTNAGG | 1 cut(s) | 2292 |
| Eco88I | CYCGRG | 1 cut(s) | 6692 |
| Eco91I | GGTNACC | 1 cut(s) | 3449 |
| EcoICRI | GAGCTC | 1 cut(s) | 4209 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 5278 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2296 |
| EcoO65I | GGTNACC | 1 cut(s) | 3449 |
| EcoRI | GAATTC | 3 cut(s) | 4351, 6400, 7120 |
| EcoRII | CCWGG | 3 cut(s) | 2133, 2884, 4989 |
| EcoRV | GATATC | 3 cut(s) | 2385, 3984, 6570 |
| EcoT14I | CCWWGG | 6 cut(s) | 1907, 3522, 5952, 6459, 6545, 7438 |
| EcoT22I | ATGCAT | 5 cut(s) | 1147, 4218, 4913, 5040, 5853 |
| EcoT38I | GRGCYC | 4 cut(s) | 1212, 1805, 3108, 4211 |
| ErhI | CCWWGG | 6 cut(s) | 1907, 3522, 5952, 6459, 6545, 7438 |
| Esp3I | CGTCTC | 2 cut(s) | 1098, 6590 |
| FaqI | GGGAC | 5 cut(s) | 2368, 4668, 4910, 4968, 6802 |
| FauI | CCCGC | 1 cut(s) | 1199 |
| FauNDI | CATATG | 1 cut(s) | 5847 |
| FbaI | TGATCA | 4 cut(s) | 2953, 3676, 5049, 5842 |
| FblI | GTMKAC | 6 cut(s) | 1483, 4053, 4223, 4267, 6133, 6897 |
| FriOI | GRGCYC | 4 cut(s) | 1212, 1805, 3108, 4211 |
| FspAI | RTGCGCAY | 1 cut(s) | 5555 |
| FspI | TGCGCA | 1 cut(s) | 5555 |
| GsaI | CCCAGC | 3 cut(s) | 746, 1217, 2563 |
| GsuI | CTGGAG | 6 cut(s) | 231, 689, 3316, 5675, 6322, 6948 |
| HaeII | RGCGCY | 4 cut(s) | 478, 491, 683, 2645 |
| HaeIII | GGCC | 9 cut(s) | 604, 875, 963, 2297, 2533, 2869, 5284, 6936, 7284 |
| HapII | CCGG | 6 cut(s) | 171, 283, 296, 683, 1529, 2099 |
| HgaI | GACGC | 3 cut(s) | 522, 5748, 5885 |
| Hin1I | GRCGYC | 1 cut(s) | 533 |
| HincII | GTYRAC | 1 cut(s) | 5875 |
| HindII | GTYRAC | 1 cut(s) | 5875 |
| HindIII | AAGCTT | 6 cut(s) | 1028, 1450, 2155, 3009, 6104, 7175 |
| HpaII | CCGG | 6 cut(s) | 171, 283, 296, 683, 1529, 2099 |
| Hpy99I | CGWCG | 2 cut(s) | 29, 6866 |
| HpyCH4IV | ACGT | 7 cut(s) | 1637, 2363, 2394, 3633, 5179, 5376, 7197 |
| HpySE526I | ACGT | 7 cut(s) | 1637, 2363, 2394, 3633, 5179, 5376, 7197 |
| Hsp92I | GRCGYC | 1 cut(s) | 533 |
| Kpn2I | TCCGGA | 1 cut(s) | 1528 |
| Ksp22I | TGATCA | 4 cut(s) | 2953, 3676, 5049, 5842 |
| LguI | GCTCTTC | 1 cut(s) | 5103 |
| MaeII | ACGT | 7 cut(s) | 1637, 2363, 2394, 3633, 5179, 5376, 7197 |
| MbiI | CCGCTC | 2 cut(s) | 1281, 5647 |
| MfeI | CAATTG | 3 cut(s) | 869, 4803, 5559 |
| MhlI | GDGCHC | 9 cut(s) | 257, 1212, 1755, 1805, 1868, 3108, 4211, 4236, 6961 |
| MlsI | TGGCCA | 1 cut(s) | 875 |
| MluNI | TGGCCA | 1 cut(s) | 875 |
| MlyI | GAGTC | 7 cut(s) | 346, 1489, 1589, 1924, 6409, 6464, 7037 |
| MmeI | TCCRAC | 9 cut(s) | 48, 378, 2635, 3271, 3740, 3764, 5144, 5367, 7436 |
| Mox20I | TGGCCA | 1 cut(s) | 875 |
| Mph1103I | ATGCAT | 5 cut(s) | 1147, 4218, 4913, 5040, 5853 |
| MroI | TCCGGA | 1 cut(s) | 1528 |
| MroXI | GAANNNNTTC | 7 cut(s) | 2119, 2213, 2216, 3626, 4518, 6157, 6468 |
| MscI | TGGCCA | 1 cut(s) | 875 |
| MslI | CAYNNNNRTG | 8 cut(s) | 345, 1153, 4892, 5268, 5850, 6950, 7065, 7496 |
| Msp20I | TGGCCA | 1 cut(s) | 875 |
| MspA1I | CMGCKG | 1 cut(s) | 738 |
| MspCI | CTTAAG | 2 cut(s) | 95, 1031 |
| MspI | CCGG | 6 cut(s) | 171, 283, 296, 683, 1529, 2099 |
| MspR9I | CCNGG | 6 cut(s) | 297, 684, 2100, 2135, 2886, 4991 |
| MunI | CAATTG | 3 cut(s) | 869, 4803, 5559 |
| Mva1269I | GAATGC | 4 cut(s) | 3626, 4594, 5295, 5354 |
| MvaI | CCWGG | 3 cut(s) | 2135, 2886, 4991 |
| MvnI | CGCG | 2 cut(s) | 412, 5759 |
| NciI | CCSGG | 3 cut(s) | 297, 684, 2100 |
| NcoI | CCATGG | 2 cut(s) | 6545, 7438 |
| NdeI | CATATG | 1 cut(s) | 5847 |
| NlaIV | GGNNCC | 9 cut(s) | 822, 1211, 2298, 3048, 4820, 5272, 7203, 7283, 7448 |
| NsbI | TGCGCA | 1 cut(s) | 5555 |
| NsiI | ATGCAT | 5 cut(s) | 1147, 4218, 4913, 5040, 5853 |
| NspI | RCATGY | 7 cut(s) | 1409, 3737, 5588, 5855, 6075, 6389, 7272 |
| NspV | TTCGAA | 1 cut(s) | 1447 |
| PaeI | GCATGC | 1 cut(s) | 3737 |
| PaeR7I | CTCGAG | 1 cut(s) | 6692 |
| PagI | TCATGA | 4 cut(s) | 106, 1248, 3352, 4477 |
| PceI | AGGCCT | 1 cut(s) | 5284 |
| PciI | ACATGT | 3 cut(s) | 1405, 6071, 6385 |
| PciSI | GCTCTTC | 1 cut(s) | 5103 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 530 |
| PctI | GAATGC | 4 cut(s) | 3626, 4594, 5295, 5354 |
| PdmI | GAANNNNTTC | 7 cut(s) | 2119, 2213, 2216, 3626, 4518, 6157, 6468 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 959, 5791, 7479 |
| PleI | GAGTC | 7 cut(s) | 345, 1488, 1589, 1924, 6409, 6463, 7037 |
| PmaCI | CACGTG | 1 cut(s) | 5180 |
| PmlI | CACGTG | 1 cut(s) | 5180 |
| PpsI | GAGTC | 7 cut(s) | 345, 1488, 1589, 1924, 6409, 6463, 7037 |
| Ppu21I | YACGTR | 2 cut(s) | 2395, 5180 |
| PscI | ACATGT | 3 cut(s) | 1405, 6071, 6385 |
| PshBI | ATTAAT | 4 cut(s) | 3948, 4094, 4533, 5571 |
| PsiI | TTATAA | 1 cut(s) | 188 |
| Psp124BI | GAGCTC | 1 cut(s) | 4211 |
| Psp6I | CCWGG | 3 cut(s) | 2133, 2884, 4989 |
| PspCI | CACGTG | 1 cut(s) | 5180 |
| PspEI | GGTNACC | 1 cut(s) | 3449 |
| PspFI | CCCAGC | 3 cut(s) | 742, 1213, 2559 |
| PspGI | CCWGG | 3 cut(s) | 2133, 2884, 4989 |
| PspN4I | GGNNCC | 9 cut(s) | 822, 1211, 2298, 3048, 4820, 5272, 7203, 7283, 7448 |
| PspPI | GGNCC | 4 cut(s) | 1628, 2296, 3089, 7282 |
| PspXI | VCTCGAGB | 1 cut(s) | 6692 |
| PstI | CTGCAG | 7 cut(s) | 570, 913, 1863, 2281, 2322, 6184, 6348 |
| PstNI | CAGNNNCTG | 3 cut(s) | 4649, 5837, 7046 |
| RseI | CAYNNNNRTG | 8 cut(s) | 345, 1153, 4892, 5268, 5850, 6950, 7065, 7496 |
| SacI | GAGCTC | 1 cut(s) | 4211 |
| SapI | GCTCTTC | 1 cut(s) | 5103 |
| Sau96I | GGNCC | 4 cut(s) | 1628, 2296, 3089, 7282 |
| ScaI | AGTACT | 2 cut(s) | 2044, 3551 |
| SchI | GAGTC | 7 cut(s) | 346, 1489, 1589, 1924, 6409, 6464, 7037 |
| ScrFI | CCNGG | 6 cut(s) | 297, 684, 2100, 2135, 2886, 4991 |
| SduI | GDGCHC | 9 cut(s) | 257, 1212, 1755, 1805, 1868, 3108, 4211, 4236, 6961 |
| Sfr274I | CTCGAG | 1 cut(s) | 6692 |
| SfuI | TTCGAA | 1 cut(s) | 1447 |
| SinI | GGWCC | 2 cut(s) | 1628, 3089 |
| SlaI | CTCGAG | 1 cut(s) | 6692 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 345, 1153, 4892, 5268, 5850, 6950, 7065, 7496 |
| SmlI | CTYRAG | 9 cut(s) | 95, 1031, 1358, 1421, 1507, 1718, 2645, 6410, 6692 |
| SmoI | CTYRAG | 9 cut(s) | 95, 1031, 1358, 1421, 1507, 1718, 2645, 6410, 6692 |
| SpeI | ACTAGT | 1 cut(s) | 4259 |
| SphI | GCATGC | 1 cut(s) | 3737 |
| SseBI | AGGCCT | 1 cut(s) | 5284 |
| SspI | AATATT | 5 cut(s) | 880, 2748, 3946, 4402, 6051 |
| SstI | GAGCTC | 1 cut(s) | 4211 |
| StuI | AGGCCT | 1 cut(s) | 5284 |
| StyD4I | CCNGG | 6 cut(s) | 295, 682, 2098, 2133, 2884, 4989 |
| StyI | CCWWGG | 6 cut(s) | 1907, 3522, 5952, 6459, 6545, 7438 |
| TaiI | ACGT | 7 cut(s) | 1640, 2366, 2397, 3636, 5182, 5379, 7200 |
| TaqII | GACCGA | 2 cut(s) | 1055, 4629 |
| TatI | WGTACW | 6 cut(s) | 1944, 2042, 2729, 3221, 3549, 5056 |
| TauI | GCSGC | 3 cut(s) | 488, 1009, 7385 |
| TspGWI | ACGGA | 2 cut(s) | 1186, 7305 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 959, 5791, 7479 |
| Vha464I | CTTAAG | 2 cut(s) | 95, 1031 |
| VpaK11BI | GGWCC | 2 cut(s) | 1628, 3089 |
| VspI | ATTAAT | 4 cut(s) | 3948, 4094, 4533, 5571 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 5278 |
| XbaI | TCTAGA | 2 cut(s) | 4252, 5027 |
| XceI | RCATGY | 7 cut(s) | 1409, 3737, 5588, 5855, 6075, 6389, 7272 |
| XhoI | CTCGAG | 1 cut(s) | 6692 |
| XmiI | GTMKAC | 6 cut(s) | 1483, 4053, 4223, 4267, 6133, 6897 |
| XmnI | GAANNNNTTC | 7 cut(s) | 2119, 2213, 2216, 3626, 4518, 6157, 6468 |
| ZrmI | AGTACT | 2 cut(s) | 2044, 3551 |
| Zsp2I | ATGCAT | 5 cut(s) | 1147, 4218, 4913, 5040, 5853 |