Rmu_sc0000533.1_g000003

Nucleolar pre-ribosomal-associated protein 1

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000533.1
Physical Location & Seq
Forward (+)
4955 .. 8904
3950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000533.1_g000003.1.cds

Sequence Viewer

Length: 3657 bp
atgatttgctcagtcttggttgagagacttggtgactgttctgccactcatcagtctaggggcaactgtgaatggaggccgttgaacagtttatttttgttttcccagagtatatctgaccgtgaaatttgttgcatttcttctattgacaataaggctaagccttctggtagttcttttgcactagcgcttgaggaagttggaagacttgcaagaggtgggagtgatggtgaagtagctggaataaccaaagccttcttctcctcatttatctgtacaacgcctgatgaaatattagcaaactttccatcagttatggcaatttcacaatgccttggtcttccattcactctcttttcatcaattttctttcttgaacccacctttctccccagagtttctaagttttggcctgaagttttttttcctgggcttagtatggctctaaccaatatctgttgcaaaggaggaaaagaaattgcctgtggatctcctgatcatgcttcttatacaggagaagcaatatgtaaccaaaattgtggtgcaaatgaagctgctgctactgccttcagtttatttttgatgaaggcacctttccacgttttgttccctgccattatgtgcattgacggtccttattcgttagagccctcaaagatacaagacctgcttttggctaaactatcagactgtgcaactgattaccaccttatttcctatttgcgccttgtgttattttggctttatcagatacggttgtcttgtacagttgaacaattagtcggtttccaacaactttctgagatttgctcagttctggtgaagaacttattatctcaactattggtggctgattctgattccctcagaacctccagtgtaaatctatcaagtcatgatattcaaaaggtggctgaaactatcttttatcatcctgcaataactacatcgttatcctgccctttggagtgtagcgaagacttaccagagggtaacctaccagacaacgtggatgctctcatcaatttatcgagggggaaagttcatagattagaccatcatgccttggatatattggcaacaacttgcaagtacttgttttctctgtgcaatgacaaccaatttacacttgaagtagaagatggggatgctacaaagtttgtgaaatcattcaacgtcttggttcataagctctttcaggaagtcaaggtcaaatttgatcacagcattagaagtaacaattgtatggctttcctcccaacattttatgctttgcatgctttgagtggttttatatctccatttgagcttcttgaattagtgcgttggatgcttagtagagttgatttggatggcaaccagaaatctgctatttgttttggatcttgtattgctggtggtgcatttagaaatctatctaattatttgcagcagccaaatacaaagagaaaggcatttgatttgttttggacaatggaagaaaacaatattagtagcgacattgttgaaaaaatctatattaagatatcaaagcttgcctttcttttggaatcagaagttgtagatcattgcttgctggaagctatgaatgtggtatacaggcagaaatgtatgcaaaagtgtaattttcatccattaataatagtgatgtcgagagttatagcaaccacgccaatagaaatgctttcccattgcatttacagaacaagcaagatgaaagctagattgttgtctcttcttattgatctgagctctatgcatttgtctacctttgggcacttactttttggtactgtagatactagttgtctacataatggcaatgtgacatctgacctagctctttcagatgacgactatatgatgcttctgccttctgctgtgtcctacatgaattcagttttaatgaaatttggagagccatgctacaggcattttagaaatattccttccttttattcaaagattattttggatggtctccttcattggaagaattttgtttctcgtgatgtgtttcatgaagattttggagaggttttgccgtcatctgcggaagaagttcttaacctcattaatgatagtcttcttggcaaagcgatttgtatgctgcactatcactatgctttgaatgcagattcagtagaaaggaaagaccgattaaagcatttcagttccattttcccagcttctgtgggacacaaggagctgatagactgggatgttggtggattgggttctcactctttcaatgaaacattaaaccttgtaaataaaattcatgcaaaggtctcgttttgtaggatgctgttattccccaaagatactcaggttcactctctttcaattgaagccagtgggaacctgaaagacgttcctctggacatggaagataacaaaggtaactcctcacaaatgcagtttttgaacatcttggtggatatgtggcaatgcattgttaaaacagtcccttcagtctttcatagttctcaaaagggacacagcacagatagttcttcattgtggagatacctggaagttctgatattgaaaagcatttttgaagtgtctagagagatgcatgacagtctaatcagagtacaatctatacccttcctagagaaattgatgaaaccagctcttctgcataggtttgacgatccaacaactttgcaaatgctgcgtgatcttttgacttttctatctggggggaaattttcgcgtgttccctatcttcagcttttacttgcacactctcaatttgtgcctactattcgttcactatccaaaccatcacattcttcccatgtgggtgccttttctaggcctatgtctagcattcttagatcacctgtttcccttacctcaaaacaaaatgtagatgatggggaatgcgatctagaaacatctgagctgtacgttaaacagttggaggttatcaaattactgcggacactccttcctttgaggtttcaacaggatggttttgactttggaaaagatttaggcgttgatcttagggaagttcatttactacttttgtcttcttatggtgcaacactttctgaaattgatgtggagatatgcaatctgatgcgcacaattgagtgtattgatggtttggagcatgtccgatttgctggaatggattacctttggggcagggctgcgttgaagatagaaaaggaacggaatctgcagagtttgtcttatgatacaatcaatgatgctgaagcagtaaaagaacaccgtagaaatcaagttagagaaaatcttgcgattgaccccaaaatatgcgcgtccactttgctatattttccctaccatatagtggcatctgatgagctattatccttgaacaagtttcaaacagatcctgttgatcatatgcatgtgttatgctcccccgatgttgacgctaaagaaagatataatcctattttcatcttgcgcttctctatgcattgtctttcagaaggttacattgaacccttggagtttgctggtttaggcttacttgctattgcctttatgagtatttcatcagctaatgacaagataagaagtttgggttatgaaactcttgaaacattgcaggacaagttgaaggcagtccatgaagagctggcagaaatactacctgacaagtttaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1218

Amino Acids

136.93

Weight (kDa)

5.77

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 3098
Acc36I ACCTGC 1 cut(s) 675
AccB1I GGYRCC 2 cut(s) 589, 2813
AccB7I CCANNNNNTGG 1 cut(s) 3331
AccI GTMKAC 3 cut(s) 1596, 1766, 1810
AccII CGCG 2 cut(s) 2722, 3299
AciI CCGC 2 cut(s) 2054, 2950
AclWI GGATC 4 cut(s) 496, 1390, 2654, 3368
AcsI RAATTY 7 cut(s) 126, 1214, 1894, 1910, 1996, 2277, 2714
AcuI CTGAAG 5 cut(s) 435, 553, 2457, 2720, 3252
AfaI GTAC 6 cut(s) 277, 766, 1094, 1792, 2601, 2918
AfeI AGCGCT 1 cut(s) 189
AfiI CCNNNNNNNGG 3 cut(s) 673, 2823, 3331
AhlI ACTAGT 1 cut(s) 1802
AjnI CCWGG 2 cut(s) 427, 2532
AjuI GAANNNNNNNTTGG 2 cut(s) 242, 274
Alw21I GWGCWC 1 cut(s) 1754
Alw26I GTCTC 4 cut(s) 19, 1737, 1985, 2296
AlwI GGATC 4 cut(s) 496, 1390, 2654, 3368
AlwNI CAGNNNCTG 2 cut(s) 2192, 3377
Aor51HI AGCGCT 1 cut(s) 189
AoxI GGCC 3 cut(s) 77, 410, 2825
ApeKI GCWGC 7 cut(s) 554, 557, 1429, 1432, 2110, 2680, 3167
ApoI RAATTY 7 cut(s) 126, 1214, 1894, 1910, 1996, 2277, 2714
AseI ATTAAT 2 cut(s) 1637, 2076
Asp700I GAANNNNTTC 2 cut(s) 1169, 2061
AspLEI GCGC 5 cut(s) 190, 726, 3099, 3299, 3453
AspS9I GGNCC 1 cut(s) 632
AsuHPI GGTGA 4 cut(s) 44, 242, 832, 2841
AvaII GGWCC 1 cut(s) 632
BaeGI GKGCMC 1 cut(s) 1779
BaeI ACNNNNGTAYC 4 cut(s) 743, 776, 2316, 2349
BanI GGYRCC 2 cut(s) 589, 2813
BanII GRGCYC 2 cut(s) 651, 1754
BarI GAAGNNNNNNTAC 2 cut(s) 3015, 3047
BauI CACGAG 1 cut(s) 2007
BbsI GAAGAC 5 cut(s) 211, 332, 984, 2078, 3036
Bbv12I GWGCWC 1 cut(s) 1754
BbvI GCAGC 7 cut(s) 541, 544, 1441, 1444, 2097, 2667, 3154
BceAI ACGGC 2 cut(s) 64, 2029
BcgI CGANNNNNNTGC 4 cut(s) 2089, 2123, 2274, 2308
BciT130I CCWGG 2 cut(s) 429, 2534
BclI TGATCA 3 cut(s) 496, 1219, 3382
BcoDI GTCTC 4 cut(s) 19, 1737, 1985, 2296
BcuI ACTAGT 1 cut(s) 1802
BfmI CTRYAG 3 cut(s) 1794, 1927, 3197
BfoI RGCGCY 1 cut(s) 191
BfuAI ACCTGC 1 cut(s) 675
BisI GCNGC 7 cut(s) 555, 558, 1430, 1433, 2111, 2681, 3168
BlpI GCTNAGC 1 cut(s) 159
BlsI GCNGC 7 cut(s) 556, 559, 1431, 1434, 2112, 2682, 3169
BmcAI AGTACT 1 cut(s) 1094
Bme1390I CCNGG 2 cut(s) 429, 2534
Bme18I GGWCC 1 cut(s) 632
BmgT120I GGNCC 1 cut(s) 632
BmiI GGNNCC 3 cut(s) 591, 2363, 2815
BmrFI CCNGG 2 cut(s) 429, 2534
BmrI ACTGGG 1 cut(s) 2227
BmsI GCATC 9 cut(s) 1003, 1138, 1320, 1854, 2295, 2568, 3084, 3217, 3344
BmuI ACTGGG 1 cut(s) 2227
BpiI GAAGAC 5 cut(s) 211, 332, 984, 2078, 3036
BplI GAGNNNNNCTC 2 cut(s) 794, 826
BpmI CTGGAG 1 cut(s) 859
Bpu1102I GCTNAGC 1 cut(s) 159
BpuEI CTTGAG 1 cut(s) 212
BsaI GGTCTC 2 cut(s) 1985, 2296
BsaJI CCNNGG 4 cut(s) 334, 428, 1065, 3492
BsaXI ACNNNNNCTCC 2 cut(s) 214, 244
Bsc4I CCNNNNNNNGG 3 cut(s) 673, 2823, 3331
Bse1I ACTGG 3 cut(s) 876, 2222, 2355
Bse3DI GCAATG 6 cut(s) 1117, 1567, 1690, 1828, 2456, 3590
BseBI CCWGG 2 cut(s) 429, 2534
BseDI CCNNGG 4 cut(s) 334, 428, 1065, 3492
BseLI CCNNNNNNNGG 3 cut(s) 673, 2823, 3331
BseMI GCAATG 6 cut(s) 1117, 1567, 1690, 1828, 2456, 3590
BseMII CTCAG 7 cut(s) 24, 792, 825, 880, 1739, 2342, 2901
BseNI ACTGG 3 cut(s) 876, 2222, 2355
BseRI GAGGAG 2 cut(s) 253, 2398
BseSI GKGCMC 1 cut(s) 1779
BseXI GCAGC 7 cut(s) 541, 544, 1441, 1444, 2097, 2667, 3154
BseYI CCCAGC 1 cut(s) 2185
BsgI GTGCAG 1 cut(s) 2096
Bsh1236I CGCG 2 cut(s) 2722, 3299
BshFI GGCC 3 cut(s) 79, 412, 2827
BshNI GGYRCC 2 cut(s) 589, 2813
BsiHKAI GWGCWC 1 cut(s) 1754
BslFI GGGAC 3 cut(s) 2211, 2453, 2511
BslI CCNNNNNNNGG 3 cut(s) 673, 2823, 3331
BsmAI GTCTC 4 cut(s) 19, 1737, 1985, 2296
BsmFI GGGAC 3 cut(s) 2211, 2453, 2511
BsmI GAATGC 3 cut(s) 2137, 2838, 2897
BsnI GGCC 3 cut(s) 79, 412, 2827
Bso31I GGTCTC 2 cut(s) 1985, 2296
Bsp1286I GDGCHC 3 cut(s) 651, 1754, 1779
Bsp1407I TGTACA 2 cut(s) 275, 764
Bsp1720I GCTNAGC 1 cut(s) 159
BspACI CCGC 2 cut(s) 2054, 2950
BspANI GGCC 3 cut(s) 79, 412, 2827
BspCNI CTCAG 7 cut(s) 23, 793, 824, 879, 1740, 2341, 2902
BspFNI CGCG 2 cut(s) 2722, 3299
BspHI TCATGA 2 cut(s) 895, 2020
BspLI GGNNCC 3 cut(s) 591, 2363, 2815
BspMAI CTGCAG 1 cut(s) 3201
BspMI ACCTGC 1 cut(s) 675
BspPI GGATC 4 cut(s) 496, 1390, 2654, 3368
BspQI GCTCTTC 2 cut(s) 2646, 3615
BspT107I GGYRCC 2 cut(s) 589, 2813
BspTNI GGTCTC 2 cut(s) 1985, 2296
BsrDI GCAATG 6 cut(s) 1117, 1567, 1690, 1828, 2456, 3590
BsrGI TGTACA 2 cut(s) 275, 764
BsrI ACTGG 3 cut(s) 876, 2222, 2355
BssECI CCNNGG 4 cut(s) 334, 428, 1065, 3492
BssNAI GTATAC 1 cut(s) 1597
BssSI CACGAG 1 cut(s) 2007
BssT1I CCWWGG 3 cut(s) 334, 1065, 3492
Bst1107I GTATAC 1 cut(s) 1597
Bst2BI CACGAG 1 cut(s) 2007
Bst2UI CCWGG 2 cut(s) 429, 2534
Bst6I CTCTTC 3 cut(s) 1740, 2646, 3615
BstAPI GCANNNNNTGC 1 cut(s) 2680
BstAUI TGTACA 2 cut(s) 275, 764
BstC8I GCNNGC 4 cut(s) 1278, 1536, 1574, 3627
BstEII GGTNACC 1 cut(s) 992
BstENI CCTNNNNNAGG 1 cut(s) 2821
BstFNI CGCG 2 cut(s) 2722, 3299
BstH2I RGCGCY 1 cut(s) 191
BstHHI GCGC 5 cut(s) 190, 726, 3099, 3299, 3453
BstMAI GTCTC 4 cut(s) 19, 1737, 1985, 2296
BstMWI GCNNNNNNNGC 7 cut(s) 551, 563, 1277, 1330, 1400, 2132, 2680
BstNI CCWGG 2 cut(s) 429, 2534
BstNSI RCATGY 3 cut(s) 1280, 3131, 3395
BstPI GGTNACC 1 cut(s) 992
BstSCI CCNGG 2 cut(s) 427, 2532
BstSFI CTRYAG 3 cut(s) 1794, 1927, 3197
BstSLI GKGCMC 1 cut(s) 1779
BstUI CGCG 2 cut(s) 2722, 3299
BstV1I GCAGC 7 cut(s) 541, 544, 1441, 1444, 2097, 2667, 3154
BstV2I GAAGAC 5 cut(s) 211, 332, 984, 2078, 3036
BstX2I RGATCY 3 cut(s) 488, 1382, 3373
BstXI CCANNNNNNTGG 1 cut(s) 539
BstYI RGATCY 3 cut(s) 488, 1382, 3373
BstZ17I GTATAC 1 cut(s) 1597
BsuRI GGCC 3 cut(s) 79, 412, 2827
BtsIMutI CAGTG 2 cut(s) 883, 2362
BveI ACCTGC 1 cut(s) 675
Cac8I GCNNGC 4 cut(s) 1278, 1536, 1574, 3627
CaiI CAGNNNCTG 2 cut(s) 2192, 3377
CciI TCATGA 2 cut(s) 895, 2020
CfoI GCGC 5 cut(s) 190, 726, 3099, 3299, 3453
Cfr13I GGNCC 1 cut(s) 632
CseI GACGC 2 cut(s) 3288, 3425
Csp6I GTAC 6 cut(s) 276, 765, 1093, 1791, 2600, 2917
CviQI GTAC 6 cut(s) 276, 765, 1093, 1791, 2600, 2917
Eam1104I CTCTTC 3 cut(s) 1740, 2646, 3615
EarI CTCTTC 3 cut(s) 1740, 2646, 3615
Ecl136II GAGCTC 1 cut(s) 1752
Eco130I CCWWGG 3 cut(s) 334, 1065, 3492
Eco147I AGGCCT 1 cut(s) 2827
Eco24I GRGCYC 2 cut(s) 651, 1754
Eco31I GGTCTC 2 cut(s) 1985, 2296
Eco32I GATATC 1 cut(s) 1527
Eco47I GGWCC 1 cut(s) 632
Eco47III AGCGCT 1 cut(s) 189
Eco53kI GAGCTC 1 cut(s) 1752
Eco57I CTGAAG 5 cut(s) 435, 553, 2457, 2720, 3252
Eco91I GGTNACC 1 cut(s) 992
EcoICRI GAGCTC 1 cut(s) 1752
EcoNI CCTNNNNNAGG 1 cut(s) 2821
EcoO65I GGTNACC 1 cut(s) 992
EcoRI GAATTC 1 cut(s) 1894
EcoRII CCWGG 2 cut(s) 427, 2532
EcoRV GATATC 1 cut(s) 1527
EcoT14I CCWWGG 3 cut(s) 334, 1065, 3492
EcoT22I ATGCAT 5 cut(s) 1761, 2456, 2583, 3393, 3465
EcoT38I GRGCYC 2 cut(s) 651, 1754
ErhI CCWWGG 3 cut(s) 334, 1065, 3492
FalI AAGNNNNNCTT 6 cut(s) 654, 686, 1523, 1555, 2049, 2081
FaqI GGGAC 3 cut(s) 2211, 2453, 2511
FauNDI CATATG 1 cut(s) 3387
FbaI TGATCA 3 cut(s) 496, 1219, 3382
FblI GTMKAC 3 cut(s) 1596, 1766, 1810
Fnu4HI GCNGC 7 cut(s) 555, 558, 1430, 1433, 2111, 2681, 3168
FriOI GRGCYC 2 cut(s) 651, 1754
Fsp4HI GCNGC 7 cut(s) 555, 558, 1430, 1433, 2111, 2681, 3168
FspAI RTGCGCAY 1 cut(s) 3098
FspI TGCGCA 1 cut(s) 3098
GlaI GCGC 5 cut(s) 189, 725, 3098, 3298, 3452
GluI GCNGC 7 cut(s) 555, 558, 1430, 1433, 2111, 2681, 3168
GsaI CCCAGC 1 cut(s) 2189
GsuI CTGGAG 1 cut(s) 859
HaeII RGCGCY 1 cut(s) 191
HaeIII GGCC 3 cut(s) 79, 412, 2827
HgaI GACGC 2 cut(s) 3288, 3425
HhaI GCGC 5 cut(s) 190, 726, 3099, 3299, 3453
Hin6I GCGC 5 cut(s) 188, 724, 3097, 3297, 3451
HinP1I GCGC 5 cut(s) 188, 724, 3097, 3297, 3451
HincII GTYRAC 1 cut(s) 3415
HindII GTYRAC 1 cut(s) 3415
HindIII AAGCTT 1 cut(s) 1532
HinfI GANTC 5 cut(s) 854, 860, 1550, 2138, 3193
HphI GGTGA 4 cut(s) 44, 242, 832, 2841
Hpy166II GTNNAC 7 cut(s) 1597, 1767, 1811, 2335, 2780, 3303, 3415
Hpy8I GTNNAC 7 cut(s) 1597, 1767, 1811, 2335, 2780, 3303, 3415
HpyCH4IV ACGT 5 cut(s) 600, 1008, 1176, 2373, 2919
HpyF10VI GCNNNNNNNGC 7 cut(s) 551, 563, 1277, 1330, 1400, 2132, 2680
HpySE526I ACGT 5 cut(s) 600, 1008, 1176, 2373, 2919
HspAI GCGC 5 cut(s) 188, 724, 3097, 3297, 3451
Ksp22I TGATCA 3 cut(s) 496, 1219, 3382
LguI GCTCTTC 2 cut(s) 2646, 3615
LmnI GCTCC 3 cut(s) 2206, 3124, 3407
Lsp1109I GCAGC 7 cut(s) 541, 544, 1441, 1444, 2097, 2667, 3154
LweI GCATC 9 cut(s) 1003, 1138, 1320, 1854, 2295, 2568, 3084, 3217, 3344
MaeII ACGT 5 cut(s) 600, 1008, 1176, 2373, 2919
MaeIII GTNAC 7 cut(s) 32, 527, 992, 1235, 1825, 2402, 3479
MfeI CAATTG 3 cut(s) 1240, 2346, 3102
MflI RGATCY 3 cut(s) 488, 1382, 3373
MhlI GDGCHC 3 cut(s) 651, 1754, 1779
MmeI TCCRAC 5 cut(s) 181, 814, 1307, 2687, 2910
Mph1103I ATGCAT 5 cut(s) 1761, 2456, 2583, 3393, 3465
MroXI GAANNNNTTC 2 cut(s) 1169, 2061
MslI CAYNNNNRTG 3 cut(s) 2435, 2811, 3390
MspR9I CCNGG 2 cut(s) 429, 2534
MunI CAATTG 3 cut(s) 1240, 2346, 3102
Mva1269I GAATGC 3 cut(s) 2137, 2838, 2897
MvaI CCWGG 2 cut(s) 429, 2534
MvnI CGCG 2 cut(s) 2722, 3299
MwoI GCNNNNNNNGC 7 cut(s) 551, 563, 1277, 1330, 1400, 2132, 2680
NdeI CATATG 1 cut(s) 3387
NlaIV GGNNCC 3 cut(s) 591, 2363, 2815
NmuCI GTSAC 2 cut(s) 32, 1825
NsbI TGCGCA 1 cut(s) 3098
NsiI ATGCAT 5 cut(s) 1761, 2456, 2583, 3393, 3465
NspI RCATGY 3 cut(s) 1280, 3131, 3395
PaeI GCATGC 1 cut(s) 1280
PagI TCATGA 2 cut(s) 895, 2020
PceI AGGCCT 1 cut(s) 2827
PciSI GCTCTTC 2 cut(s) 2646, 3615
PctI GAATGC 3 cut(s) 2137, 2838, 2897
PdmI GAANNNNTTC 2 cut(s) 1169, 2061
PfeI GAWTC 5 cut(s) 854, 860, 1550, 2138, 3193
PflMI CCANNNNNTGG 1 cut(s) 3331
PkrI GCNGC 7 cut(s) 556, 559, 1431, 1434, 2112, 2682, 3169
PshBI ATTAAT 2 cut(s) 1637, 2076
Psp124BI GAGCTC 1 cut(s) 1754
Psp6I CCWGG 2 cut(s) 427, 2532
PspEI GGTNACC 1 cut(s) 992
PspFI CCCAGC 1 cut(s) 2185
PspGI CCWGG 2 cut(s) 427, 2532
PspN4I GGNNCC 3 cut(s) 591, 2363, 2815
PspPI GGNCC 1 cut(s) 632
PstI CTGCAG 1 cut(s) 3201
PstNI CAGNNNCTG 2 cut(s) 2192, 3377
PsuI RGATCY 3 cut(s) 488, 1382, 3373
RsaI GTAC 6 cut(s) 277, 766, 1094, 1792, 2601, 2918
RsaNI GTAC 6 cut(s) 276, 765, 1093, 1791, 2600, 2917
RseI CAYNNNNRTG 3 cut(s) 2435, 2811, 3390
SacI GAGCTC 1 cut(s) 1754
SapI GCTCTTC 2 cut(s) 2646, 3615
SatI GCNGC 7 cut(s) 555, 558, 1430, 1433, 2111, 2681, 3168
Sau96I GGNCC 1 cut(s) 632
ScaI AGTACT 1 cut(s) 1094
ScrFI CCNGG 2 cut(s) 429, 2534
SduI GDGCHC 3 cut(s) 651, 1754, 1779
SfaNI GCATC 9 cut(s) 1003, 1138, 1320, 1854, 2295, 2568, 3084, 3217, 3344
SfcI CTRYAG 3 cut(s) 1794, 1927, 3197
SinI GGWCC 1 cut(s) 632
SmiMI CAYNNNNRTG 3 cut(s) 2435, 2811, 3390
SmlI CTYRAG 1 cut(s) 191
SmoI CTYRAG 1 cut(s) 191
SpeI ACTAGT 1 cut(s) 1802
SphI GCATGC 1 cut(s) 1280
SseBI AGGCCT 1 cut(s) 2827
SsiI CCGC 2 cut(s) 2054, 2950
SspI AATATT 3 cut(s) 294, 1489, 1945
SstI GAGCTC 1 cut(s) 1754
StuI AGGCCT 1 cut(s) 2827
StyD4I CCNGG 2 cut(s) 427, 2532
StyI CCWWGG 3 cut(s) 334, 1065, 3492
TaiI ACGT 5 cut(s) 603, 1011, 1179, 2376, 2922
TaqI TCGA 2 cut(s) 1031, 1652
TaqII GACCGA 1 cut(s) 2172
TatI WGTACW 4 cut(s) 275, 764, 1092, 2599
TfiI GAWTC 5 cut(s) 854, 860, 1550, 2138, 3193
TscAI CASTG 2 cut(s) 883, 2362
TseFI GTSAC 2 cut(s) 32, 1825
TseI GCWGC 7 cut(s) 554, 557, 1429, 1432, 2110, 2680, 3167
Tsp45I GTSAC 2 cut(s) 32, 1825
TspGWI ACGGA 1 cut(s) 3205
TspRI CASTG 2 cut(s) 883, 2362
Van91I CCANNNNNTGG 1 cut(s) 3331
VpaK11BI GGWCC 1 cut(s) 632
VspI ATTAAT 2 cut(s) 1637, 2076
XagI CCTNNNNNAGG 1 cut(s) 2821
XapI RAATTY 7 cut(s) 126, 1214, 1894, 1910, 1996, 2277, 2714
XbaI TCTAGA 2 cut(s) 2570, 2899
XceI RCATGY 3 cut(s) 1280, 3131, 3395
XmiI GTMKAC 3 cut(s) 1596, 1766, 1810
XmnI GAANNNNTTC 2 cut(s) 1169, 2061
ZrmI AGTACT 1 cut(s) 1094
Zsp2I ATGCAT 5 cut(s) 1761, 2456, 2583, 3393, 3465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.