Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0002923

Physical Location & Seq

Genomic Coordinates Forward (+)

16653102 .. 16657177

Gene Structure 4076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g15370.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGTTGTGGTGCGACACGTGTCCCCATACCTCACAGCAAATCAAACCAGACCATCTCTGTTCTTCAATGGAAGGAAGGTCAGCCTCCGAAAATCAAGCTATGGTGTTTGAAGAAATGCCTAAACCTACAATTAAAGTAACCCACGAAGCTAAACTTAAAGAGCTACTGCATAATCTTAACTCTGCTGAAATTAAATTATGTTCTCATGCTACAAAAGAGTTCATTAAGTTGCTGAAAGGTGATAACGGAGGTGATTTGCTCCGTTATTATGTGAAGAATTCGGGTAAGTGCTCGGAGCTTCTCAGTGCTTGGAAGCTCCGGCGAGGGAAACCCGGAATGTTTTGTGTATTTAAACTAATTGCTGTTGTTTTGAGTCATCCTGATGGGATGTATATGCCGAATGATGTGGAGAGGATGGGTATTAGCCGGGCATTGGATAAGTTTGCACGGTCGATTATTGAAGAACAGTTGCAGGATGTGTATAAGGAGTTGAATAGTAAAGAAGCAAAACGCCAAAAGGCGGCGCTTTTGCTTTTGGCTTCCATTGTGAGGCGTGGGTCGGGGTTGGCTTCTGAGGTTGCAAAGAATTTCGATTTCAAACTCCAGGGTTTTTTTAAGATGGGTGAATTTAAAAAGAAGCAGGGTGAGAAAAGAATGAAGCTGTCGTTGAGGAAGTCGTTTGTGGGATTCGCAATGTCATTTTTGGAGGTGGGGACACCGGGATTGCTGAGGTCGGTTATACGTCAGAAGGAAATGTACTCTGGTGTCCTTCGCGGGATTGGGAATGATGATGATGAAACTGTTATCTACGTTTTGTCCACGTTGAGGGACAGGATTCTTGTTGAAGAGTCATCAGTTTCCCCGAGTCTTCGGAGTGTTCTCTTTGGGAGTGTTACTTTGGAACAATTAGTTAACGTCTGTGCAAGGGAAAATGGTGGGCCTTCTGCGGAATTGGCATACAATGTTTTGGTTATGGTTTGTACCAATCCTAGTAATGGCTTGATGTCAGATTTGAAGAAACGTCTGAAGGGTAATTCAAAGCGACTCGTGGATCTGATGAAGAAGCTTAAAGCAACTGAGATTGGCTACCACAGGGATCTTCTTTTGGCTATTGTTAGTGGAAGACCGTCTATTGGTGCAACATATATGGAAGAGTTCCCCTACAATCTTGAAGATTATTCATCACCTAACTGGTTTTCTGTTGTTATTCTTGCAGCAAACTTGGTTTCTTCAGTGCGCAGCGGGCATGCCTTTGGTATCAATGACTCTCAGTCTCATAATCCAGCCATGTTTGACAATGTGGACGTGCAGGATATCATGAAATGCTTGTATCCTCGTTCATTCAGCCGGTCTGCAATCAATAAGGGGCTGCTTCACTCTGATTTTCTAGTGAAGCATGGATCTTTAAGGCTTCTTTTAGAAGCACTGAAGTTGCTGGACTCCTTCCATGGTGTTTTAAACCATAGAGACCAAAGTTATTCTGATAATGAGAAGGTATACGTATTGGAGTCTTTCAAGCAAGAATTTCAAAATGAAGTCCGAAACTTGCTCCCTGATCATCAAGTTATGTTGACTCTACTTTCTTCTCTGAGTAGTCACTCCAAAAGTCAGCAGTTAAGCTTAAAGAGGACAGCTGAGTTGGAGCAGTTCCCTGAACATAGCCCCAAACGCTTGAAAAGAATGAAAACAGATGTGGGGAACAAGGACTCAGATATTGTTGTAGGTGGGTTAAATTTTGATCCCGATGTTGCTTCACCCAAGAACTGTGAAAGAGTTGCAGGTGCATCCACTGCGGATGCATTGGATAATGAAAAGGATGCTATAAATGTTATGGCAGAAATTTGGGGTTTGGATCTTCAATCCACACATATTAATACATTAAAGGATGCTGAGATGTACTTCTACTGTAGGCTACTCGATGCTCTCAAAACTTATCTTCGGATAATGCCCACTGGCTTGGAGGGATCATTTGAATTTTTTATGAATCTTCTAAGCAGCCCTTTAGCATCAGAAACAGATCTGCAGTGCTCTCTTTTGTCTTTGTTAACAGAATACGTTGGATTGTCTGCAAAGAGTAGAACTCCGATTAGGACTCCACCCCTGATGTATAAACATCTTTTGACATTCATGAACTTGCTAGTTTTTTCACAAGTCAGTGACATAAGGGATCAAGCGTATCATCTTGCACAAGCAGCTATGTTAAGTCTGGTGCTTTTGACAGAAACCAGCATGAAATCGCATCATGGTTCTTGTTTTTACCCGGTTTTGGTAGAAGAAAATCTTCTGTTGAAGTACTGGAGGTGGAAGTATTACAAAGCTTGTGTCGTGTTGTCATCTCATTCTTATGTGATGCCGTTTCTACTACTGGGAATGGTTTGTTCAAATACTGGGATATTGTTAAGCGTTATACCTGCCCTTTGGAAATTAGTAAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NopRA1 Npa1

Protein Analysis

813

Amino Acids

91.37

Weight (kDa)

8.76

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72270 AT4G27010 AT4G27010
fragaria_vesca	FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520
malus_domestica	MD03G1202300.v1.1
prunus_persica	Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1
pyrus_communis	pycom03g15370 pycom03g15380 pycom03g15390
rosa_chinensis	RchiOBHm_Chr5g0039261
rosa_laevigata	RLG00000033900 RLG00000033902
rosa_multiflora	Rmu_sc0000533.1_g000002 Rmu_sc0000533.1_g000003 Rmu_ssc0000410.1_g000046
rosa_roxburghii	Rroxscaffold_1G00040450 Rroxscaffold_1G00041880
rosa_rugosa	Rorug05G0177300
rosa_samantha	Rh5AG264000 Rh5BG268900 Rh5CG301900 Rh5DG276600
rosa_wichuraiana	Rw5G024750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1769
Acc16I	TGCGCA	1 cut(s)	1238
Acc36I	ACCTGC	2 cut(s)	1769, 2419
AccI	GTMKAC	1 cut(s)	1497
AccII	CGCG	1 cut(s)	774
AciI	CCGC	5 cut(s)	521, 774, 947, 1242, 1793
AclWI	GGATC	7 cut(s)	1059, 1104, 1408, 1733, 1860, 1972, 2175
AcsI	RAATTY	7 cut(s)	277, 586, 626, 1523, 1732, 1839, 1973
AcuI	CTGAAG	3 cut(s)	1046, 1215, 1448
AcvI	CACGTG	1 cut(s)	18
AfaI	GTAC	4 cut(s)	758, 982, 1898, 2294
AfiI	CCNNNNNNNGG	7 cut(s)	433, 520, 549, 825, 995, 1133, 2266
AflIII	ACRYGT	2 cut(s)	15, 17
AhdI	GACNNNNNGTC	1 cut(s)	1270
AjiI	CACGTC	1 cut(s)	1306
AjnI	CCWGG	1 cut(s)	603
Alw21I	GWGCWC	2 cut(s)	293, 2030
Alw26I	GTCTC	2 cut(s)	1278, 1461
AlwI	GGATC	7 cut(s)	1059, 1104, 1408, 1733, 1860, 1972, 2175
Ama87I	CYCGRG	1 cut(s)	862
AoxI	GGCC	1 cut(s)	938
ApeKI	GCWGC	5 cut(s)	1214, 1239, 1369, 1995, 2192
ApoI	RAATTY	7 cut(s)	277, 586, 626, 1523, 1732, 1839, 1973
ArsI	GACNNNNNNTTYG	2 cut(s)	2307, 2339
AseI	ATTAAT	1 cut(s)	1872
Asp700I	GAANNNNTTC	1 cut(s)	2280
AspLEI	GCGC	2 cut(s)	526, 1239
AspS9I	GGNCC	1 cut(s)	938
AsuC2I	CCSGG	4 cut(s)	333, 428, 720, 2261
AsuHPI	GGTGA	6 cut(s)	251, 263, 635, 656, 1176, 1746
AvaI	CYCGRG	1 cut(s)	862
BarI	GAAGNNNNNNTAC	2 cut(s)	740, 772
BauI	CACGAG	1 cut(s)	1046
BbrPI	CACGTG	1 cut(s)	18
BbsI	GAAGAC	2 cut(s)	860, 1129
Bbv12I	GWGCWC	2 cut(s)	293, 2030
BbvCI	CCTCAGC	1 cut(s)	728
BbvI	GCAGC	5 cut(s)	1226, 1251, 1356, 2007, 2204
BccI	CCATC	4 cut(s)	60, 377, 409, 613
BceAI	ACGGC	1 cut(s)	2338
BciT130I	CCWGG	1 cut(s)	605
BciVI	GTATCC	1 cut(s)	1341
BclI	TGATCA	1 cut(s)	1555
BcnI	CCSGG	4 cut(s)	333, 428, 720, 2261
BcoDI	GTCTC	2 cut(s)	1278, 1461
BfaI	CTAG	3 cut(s)	990, 1388, 2138
BfmI	CTRYAG	2 cut(s)	1906, 2021
BfoI	RGCGCY	1 cut(s)	527
BfuAI	ACCTGC	2 cut(s)	1769, 2419
BfuI	GTATCC	1 cut(s)	1341
BglII	AGATCT	1 cut(s)	2017
BisI	GCNGC	6 cut(s)	522, 1215, 1240, 1370, 1996, 2193
BlsI	GCNGC	6 cut(s)	523, 1216, 1241, 1371, 1997, 2194
BmcAI	AGTACT	1 cut(s)	2294
Bme1390I	CCNGG	5 cut(s)	333, 428, 605, 720, 2261
BmeRI	GACNNNNNGTC	1 cut(s)	1270
BmeT110I	CYCGRG	1 cut(s)	862
BmgBI	CACGTC	1 cut(s)	1306
BmgT120I	GGNCC	1 cut(s)	938
BmrFI	CCNGG	5 cut(s)	333, 428, 605, 720, 2261
BmrI	ACTGGG	2 cut(s)	2375, 2397
BmsI	GCATC	8 cut(s)	1786, 1793, 1807, 1876, 1909, 2015, 2248, 2340
BmuI	ACTGGG	2 cut(s)	2375, 2397
BoxI	GACNNNNGTC	1 cut(s)	18
BpiI	GAAGAC	2 cut(s)	860, 1129
BplI	GAGNNNNNCTC	2 cut(s)	2065, 2097
BpmI	CTGGAG	2 cut(s)	587, 2317
Bpu10I	CCTNAGC	1 cut(s)	728
BpuMI	CCSGG	4 cut(s)	333, 428, 720, 2261
BsaAI	YACGTR	2 cut(s)	18, 1501
BsaI	GGTCTC	1 cut(s)	1461
BsaJI	CCNNGG	2 cut(s)	604, 1447
Bsc4I	CCNNNNNNNGG	7 cut(s)	433, 520, 549, 825, 995, 1133, 2266
Bse118I	RCCGGY	1 cut(s)	1347
Bse1I	ACTGG	5 cut(s)	1196, 1957, 2300, 2370, 2392
Bse3DI	GCAATG	1 cut(s)	699
BseBI	CCWGG	1 cut(s)	605
BseDI	CCNNGG	2 cut(s)	604, 1447
BseGI	GGATG	8 cut(s)	376, 393, 420, 481, 1784, 1801, 1822, 1891
BseLI	CCNNNNNNNGG	7 cut(s)	433, 520, 549, 825, 995, 1133, 2266
BseMI	GCAATG	1 cut(s)	699
BseMII	CTCAG	9 cut(s)	316, 564, 719, 1068, 1283, 1580, 1626, 1722, 1881
BseNI	ACTGG	5 cut(s)	1196, 1957, 2300, 2370, 2392
BseXI	GCAGC	5 cut(s)	1226, 1251, 1356, 2007, 2204
BsgI	GTGCAG	1 cut(s)	1328
Bsh1236I	CGCG	1 cut(s)	774
Bsh1285I	CGRYCG	1 cut(s)	452
BshFI	GGCC	1 cut(s)	940
BsiEI	CGRYCG	1 cut(s)	452
BsiHKAI	GWGCWC	2 cut(s)	293, 2030
BsiHKCI	CYCGRG	1 cut(s)	862
BsiSI	CCGG	6 cut(s)	319, 333, 427, 719, 1348, 2261
BslFI	GGGAC	3 cut(s)	6, 727, 842
BslI	CCNNNNNNNGG	7 cut(s)	433, 520, 549, 825, 995, 1133, 2266
BsmAI	GTCTC	2 cut(s)	1278, 1461
BsmFI	GGGAC	3 cut(s)	6, 727, 842
BsnI	GGCC	1 cut(s)	940
Bso31I	GGTCTC	1 cut(s)	1461
BsoBI	CYCGRG	1 cut(s)	862
Bsp1286I	GDGCHC	2 cut(s)	293, 2030
Bsp143I	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
Bsp19I	CCATGG	1 cut(s)	1447
BspACI	CCGC	5 cut(s)	521, 774, 947, 1242, 1793
BspANI	GGCC	1 cut(s)	940
BspCNI	CTCAG	9 cut(s)	315, 565, 720, 1069, 1282, 1581, 1627, 1721, 1882
BspFNI	CGCG	1 cut(s)	774
BspHI	TCATGA	2 cut(s)	1317, 2127
BspMAI	CTGCAG	1 cut(s)	2025
BspMI	ACCTGC	2 cut(s)	1769, 2419
BspPI	GGATC	7 cut(s)	1059, 1104, 1408, 1733, 1860, 1972, 2175
BspTNI	GGTCTC	1 cut(s)	1461
BsrDI	GCAATG	1 cut(s)	699
BsrFI	RCCGGY	1 cut(s)	1347
BsrI	ACTGG	5 cut(s)	1196, 1957, 2300, 2370, 2392
BssAI	RCCGGY	1 cut(s)	1347
BssECI	CCNNGG	2 cut(s)	604, 1447
BssMI	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
BssNAI	GTATAC	1 cut(s)	1498
BssSI	CACGAG	1 cut(s)	1046
BssT1I	CCWWGG	1 cut(s)	1447
Bst1107I	GTATAC	1 cut(s)	1498
Bst2BI	CACGAG	1 cut(s)	1046
Bst2UI	CCWGG	1 cut(s)	605
Bst4CI	ACNGT	6 cut(s)	450, 468, 802, 1128, 1766, 1907
Bst6I	CTCTTC	2 cut(s)	840, 1146
BstAPI	GCANNNNNTGC	1 cut(s)	1790
BstBAI	YACGTR	2 cut(s)	18, 1501
BstC8I	GCNNGC	2 cut(s)	1244, 1248
BstDSI	CCRYGG	1 cut(s)	1447
BstF5I	GGATG	8 cut(s)	376, 393, 420, 481, 1784, 1801, 1822, 1891
BstFNI	CGCG	1 cut(s)	774
BstH2I	RGCGCY	1 cut(s)	527
BstHHI	GCGC	2 cut(s)	526, 1239
BstKTI	GATC	9 cut(s)	1054, 1099, 1403, 1558, 1741, 1855, 1967, 2020, 2170
BstMAI	GTCTC	2 cut(s)	1278, 1461
BstMBI	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
BstMCI	CGRYCG	1 cut(s)	452
BstMWI	GCNNNNNNNGC	5 cut(s)	953, 1243, 1668, 1790, 2192
BstNI	CCWGG	1 cut(s)	605
BstNSI	RCATGY	1 cut(s)	1250
BstPAI	GACNNNNGTC	1 cut(s)	18
BstSCI	CCNGG	5 cut(s)	331, 426, 603, 718, 2259
BstSFI	CTRYAG	2 cut(s)	1906, 2021
BstSNI	TACGTA	1 cut(s)	1501
BstUI	CGCG	1 cut(s)	774
BstV1I	GCAGC	5 cut(s)	1226, 1251, 1356, 2007, 2204
BstV2I	GAAGAC	2 cut(s)	860, 1129
BstX2I	RGATCY	5 cut(s)	1051, 1096, 1400, 1852, 2017
BstXI	CCANNNNNNTGG	1 cut(s)	1957
BstYI	RGATCY	5 cut(s)	1051, 1096, 1400, 1852, 2017
BstZ17I	GTATAC	1 cut(s)	1498
BsuI	GTATCC	1 cut(s)	1341
BsuRI	GGCC	1 cut(s)	940
BtgI	CCRYGG	1 cut(s)	1447
BtrI	CACGTC	1 cut(s)	1306
BtsCI	GGATG	8 cut(s)	376, 393, 420, 481, 1784, 1801, 1822, 1891
BtsI	GCAGTG	2 cut(s)	1788, 2030
BtsIMutI	CAGTG	7 cut(s)	310, 1239, 1424, 1788, 1950, 2030, 2161
BveI	ACCTGC	2 cut(s)	1769, 2419
Cac8I	GCNNGC	2 cut(s)	1244, 1248
CciI	TCATGA	2 cut(s)	1317, 2127
CfoI	GCGC	2 cut(s)	526, 1239
Cfr10I	RCCGGY	1 cut(s)	1347
Cfr13I	GGNCC	1 cut(s)	938
Csp6I	GTAC	4 cut(s)	757, 981, 1897, 2293
CviAII	CATG	9 cut(s)	206, 1247, 1288, 1318, 1397, 1448, 2128, 2230, 2243
CviQI	GTAC	4 cut(s)	757, 981, 1897, 2293
DpnI	GATC	9 cut(s)	1053, 1098, 1402, 1557, 1740, 1854, 1966, 2019, 2169
DpnII	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
DraI	TTTAAA	3 cut(s)	352, 631, 1458
DriI	GACNNNNNGTC	1 cut(s)	1270
Eam1104I	CTCTTC	2 cut(s)	840, 1146
Eam1105I	GACNNNNNGTC	1 cut(s)	1270
EarI	CTCTTC	2 cut(s)	840, 1146
Eco105I	TACGTA	1 cut(s)	1501
Eco130I	CCWWGG	1 cut(s)	1447
Eco31I	GGTCTC	1 cut(s)	1461
Eco32I	GATATC	1 cut(s)	1315
Eco57I	CTGAAG	3 cut(s)	1046, 1215, 1448
Eco72I	CACGTG	1 cut(s)	18
Eco88I	CYCGRG	1 cut(s)	862
EcoRI	GAATTC	1 cut(s)	277
EcoRII	CCWGG	1 cut(s)	603
EcoRV	GATATC	1 cut(s)	1315
EcoT14I	CCWWGG	1 cut(s)	1447
EcoT22I	ATGCAT	1 cut(s)	1801
ErhI	CCWWGG	1 cut(s)	1447
FaeI	CATG	9 cut(s)	209, 1250, 1291, 1321, 1400, 1451, 2131, 2233, 2246
FalI	AAGNNNNNCTT	6 cut(s)	138, 170, 1984, 2016, 2265, 2297
FaqI	GGGAC	3 cut(s)	6, 727, 842
FatI	CATG	9 cut(s)	205, 1246, 1287, 1317, 1396, 1447, 2127, 2229, 2242
FauI	CCCGC	2 cut(s)	767, 1235
FbaI	TGATCA	1 cut(s)	1555
FblI	GTMKAC	1 cut(s)	1497
Fnu4HI	GCNGC	6 cut(s)	522, 1215, 1240, 1370, 1996, 2193
FokI	GGATG	8 cut(s)	363, 400, 427, 488, 1771, 1808, 1829, 1898
Fsp4HI	GCNGC	6 cut(s)	522, 1215, 1240, 1370, 1996, 2193
FspBI	CTAG	3 cut(s)	990, 1388, 2138
FspI	TGCGCA	1 cut(s)	1238
GlaI	GCGC	2 cut(s)	525, 1238
GluI	GCNGC	6 cut(s)	522, 1215, 1240, 1370, 1996, 2193
GsuI	CTGGAG	2 cut(s)	587, 2317
HaeII	RGCGCY	1 cut(s)	527
HaeIII	GGCC	1 cut(s)	940
HapII	CCGG	6 cut(s)	319, 333, 427, 719, 1348, 2261
HhaI	GCGC	2 cut(s)	526, 1239
Hin1II	CATG	9 cut(s)	209, 1250, 1291, 1321, 1400, 1451, 2131, 2233, 2246
Hin6I	GCGC	2 cut(s)	524, 1237
HinP1I	GCGC	2 cut(s)	524, 1237
HincII	GTYRAC	3 cut(s)	913, 1572, 2046
HindII	GTYRAC	3 cut(s)	913, 1572, 2046
HindIII	AAGCTT	3 cut(s)	1064, 1618, 2316
HpaI	GTTAAC	2 cut(s)	913, 2046
HpaII	CCGG	6 cut(s)	319, 333, 427, 719, 1348, 2261
HphI	GGTGA	6 cut(s)	251, 263, 635, 656, 1176, 1746
Hpy166II	GTNNAC	6 cut(s)	819, 913, 1303, 1498, 1572, 2046
Hpy188III	TCNNGA	5 cut(s)	380, 1169, 1318, 1742, 2128
Hpy8I	GTNNAC	6 cut(s)	819, 913, 1303, 1498, 1572, 2046
HpyAV	CCTTC	8 cut(s)	65, 69, 742, 779, 951, 1021, 1453, 1486
HpyCH4III	ACNGT	6 cut(s)	450, 468, 802, 1128, 1766, 1907
HpyCH4IV	ACGT	9 cut(s)	17, 742, 810, 821, 915, 1021, 1305, 1500, 2055
HpyF10VI	GCNNNNNNNGC	5 cut(s)	953, 1243, 1668, 1790, 2192
HpySE526I	ACGT	9 cut(s)	17, 742, 810, 821, 915, 1021, 1305, 1500, 2055
Hsp92II	CATG	9 cut(s)	209, 1250, 1291, 1321, 1400, 1451, 2131, 2233, 2246
HspAI	GCGC	2 cut(s)	524, 1237
Ksp22I	TGATCA	1 cut(s)	1555
KspAI	GTTAAC	2 cut(s)	913, 2046
Kzo9I	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
LmnI	GCTCC	5 cut(s)	264, 295, 321, 1554, 1642
Lsp1109I	GCAGC	5 cut(s)	1226, 1251, 1356, 2007, 2204
LweI	GCATC	8 cut(s)	1786, 1793, 1807, 1876, 1909, 2015, 2248, 2340
MaeI	CTAG	3 cut(s)	990, 1388, 2138
MaeII	ACGT	9 cut(s)	17, 742, 810, 821, 915, 1021, 1305, 1500, 2055
MaeIII	GTNAC	4 cut(s)	136, 892, 1595, 2156
MalI	GATC	9 cut(s)	1053, 1098, 1402, 1557, 1740, 1854, 1966, 2019, 2169
MboI	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
MflI	RGATCY	5 cut(s)	1051, 1096, 1400, 1852, 2017
MhlI	GDGCHC	2 cut(s)	293, 2030
MmeI	TCCRAC	2 cut(s)	1620, 2038
Mph1103I	ATGCAT	1 cut(s)	1801
MroXI	GAANNNNTTC	1 cut(s)	2280
MslI	CAYNNNNRTG	2 cut(s)	381, 2343
MspA1I	CMGCKG	2 cut(s)	1242, 1634
MspI	CCGG	6 cut(s)	319, 333, 427, 719, 1348, 2261
MspR9I	CCNGG	5 cut(s)	333, 428, 605, 720, 2261
MvaI	CCWGG	1 cut(s)	605
MvnI	CGCG	1 cut(s)	774
MwoI	GCNNNNNNNGC	5 cut(s)	953, 1243, 1668, 1790, 2192
NciI	CCSGG	4 cut(s)	333, 428, 720, 2261
NcoI	CCATGG	1 cut(s)	1447
NdeII	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
NlaIII	CATG	9 cut(s)	209, 1250, 1291, 1321, 1400, 1451, 2131, 2233, 2246
NmuCI	GTSAC	2 cut(s)	1595, 2156
NsbI	TGCGCA	1 cut(s)	1238
NsiI	ATGCAT	1 cut(s)	1801
NspI	RCATGY	1 cut(s)	1250
PaeI	GCATGC	1 cut(s)	1250
PagI	TCATGA	2 cut(s)	1317, 2127
PaqCI	CACCTGC	1 cut(s)	1769
PdmI	GAANNNNTTC	1 cut(s)	2280
PfeI	GAWTC	3 cut(s)	687, 835, 1984
PkrI	GCNGC	6 cut(s)	523, 1216, 1241, 1371, 1997, 2194
PmaCI	CACGTG	1 cut(s)	18
PmlI	CACGTG	1 cut(s)	18
Ppu21I	YACGTR	2 cut(s)	18, 1501
PshAI	GACNNNNGTC	1 cut(s)	18
PshBI	ATTAAT	1 cut(s)	1872
Psp6I	CCWGG	1 cut(s)	603
PspCI	CACGTG	1 cut(s)	18
PspGI	CCWGG	1 cut(s)	603
PspPI	GGNCC	1 cut(s)	938
PstI	CTGCAG	1 cut(s)	2025
PsuI	RGATCY	5 cut(s)	1051, 1096, 1400, 1852, 2017
PvuII	CAGCTG	1 cut(s)	1634
RsaI	GTAC	4 cut(s)	758, 982, 1898, 2294
RsaNI	GTAC	4 cut(s)	757, 981, 1897, 2293
RseI	CAYNNNNRTG	2 cut(s)	381, 2343
SatI	GCNGC	6 cut(s)	522, 1215, 1240, 1370, 1996, 2193
Sau3AI	GATC	9 cut(s)	1051, 1096, 1400, 1555, 1738, 1852, 1964, 2017, 2167
Sau96I	GGNCC	1 cut(s)	938
ScaI	AGTACT	1 cut(s)	2294
ScrFI	CCNGG	5 cut(s)	333, 428, 605, 720, 2261
SduI	GDGCHC	2 cut(s)	293, 2030
SfaNI	GCATC	8 cut(s)	1786, 1793, 1807, 1876, 1909, 2015, 2248, 2340
SfcI	CTRYAG	2 cut(s)	1906, 2021
SmiMI	CAYNNNNRTG	2 cut(s)	381, 2343
SnaBI	TACGTA	1 cut(s)	1501
SphI	GCATGC	1 cut(s)	1250
SsiI	CCGC	5 cut(s)	521, 774, 947, 1242, 1793
SspMI	CTAG	3 cut(s)	990, 1388, 2138
StyD4I	CCNGG	5 cut(s)	331, 426, 603, 718, 2259
StyI	CCWWGG	1 cut(s)	1447
TaaI	ACNGT	6 cut(s)	450, 468, 802, 1128, 1766, 1907
TaiI	ACGT	9 cut(s)	20, 745, 813, 824, 918, 1024, 1308, 1503, 2058
TaqI	TCGA	3 cut(s)	452, 591, 1917
TatI	WGTACW	3 cut(s)	756, 1896, 2292
TauI	GCSGC	1 cut(s)	524
TfiI	GAWTC	3 cut(s)	687, 835, 1984
TscAI	CASTG	7 cut(s)	310, 1239, 1431, 1795, 1957, 2030, 2161
TseFI	GTSAC	2 cut(s)	1595, 2156
TseI	GCWGC	5 cut(s)	1214, 1239, 1369, 1995, 2192
Tsp45I	GTSAC	2 cut(s)	1595, 2156
TspGWI	ACGGA	2 cut(s)	251, 261
TspRI	CASTG	7 cut(s)	310, 1239, 1431, 1795, 1957, 2030, 2161
VspI	ATTAAT	1 cut(s)	1872
XapI	RAATTY	7 cut(s)	277, 586, 626, 1523, 1732, 1839, 1973
XceI	RCATGY	1 cut(s)	1250
XmiI	GTMKAC	1 cut(s)	1497
XmnI	GAANNNNTTC	1 cut(s)	2280
XspI	CTAG	3 cut(s)	990, 1388, 2138
ZrmI	AGTACT	1 cut(s)	2294
Zsp2I	ATGCAT	1 cut(s)	1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.