AT1G74380

Galactosyl transferase GMA12 MNN10 family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
27959527 .. 27961487
1961 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G74380.1

Sequence Viewer

Length: 1374 bp
ATGGGTCAAGATGGTTCGCCGGCGCATAAAAGACCATCCGGAAGCGGCGGAGGACTTCCGACGACGACGTTAACCAACGGTGGAGGAAGAGGTGGTCGTGGTGGTTTGTTACCTCGAGGTAGACAGATGCAGAAGACGTTTAACAACATCAAGATCACAATTCTCTGTGGTTTCGTCACAATTCTCGTCTTACGTGGCACTATCGGTGTTGGTAACCTAGGAAGCTCAAGCGCCGATGCAGTTAACCAGAACATCATTGAGGAGACTAACCGGATTCTAGCTGAGATCCGATCTGATTCGGATCCAACCGACTTGGATGAGCCTCAGGAAGGTGATATGAATCCCAATGCGACGTATGTTCTAGGTCCTAAGATCACGGATTGGGATAGTCAACGTAAGGTATGGTTGAATCAGAATCCTGAGTTTCCTAGTACTGTCAATGGCAAAGCTCGAATCTTGCTTTTAACAGGATCTCCTCCTAAGCCTTGTGATAACCCCATTGGTGATCATTATCTTTTGAAATCTGTGAAGAACAAGATTGATTATTGTAGGCTTCATGGAATTGAGATTGTGTATAACATGGCTCATTTGGATAAGGAACTCGCTGGCTATTGGGCAAAATTACCAATGATTAGGAGGTTGATGTTGTCTCATCCAGAAGTTGAGTGGATCTGGTGGATGGATAGTGATGCTTTGTTCACTGATATACTGTTTCAGATCCCTTTGGCTAGGTATCAGAAGCATAATCTAGTGATTCATGGTTATCCGGACTTGTTGTTCGATCAGAAGTCGTGGATTGCTTTGAACACAGGTAGTTTTCTGCTGAGGAATTGTCAGTGGTCGTTGGATTTGTTAGATGCTTGGGCGCCTATGGGACCTAAAGGGCCAATTCGTGATGAGGCCGGGAAGGTATTGACGGCTTATCTGAAAGGTAGACCAGCTTTTGAGGCAGATGATCAGTCAGCATTGATCTATCTCCTGCTTTCTCAGAAAGATACATGGATGGAGAAAGTGTTTGTGGAGAATCAATACTATTTGCACGGGTTTTGGGAAGGTTTGGTTGATAGGTATGAGGAGATGATAGAGAAGTATCACCCGGGATTGGGTGATGAGAGATGGCCATTTGTGACCCATTTCGTTGGGTGTAAACCGTGTGGTAGCTATGCTGATTATGCAGTCGAGAGGTGCTTGAAGAGTATGGAGAGGGCCTTTAATTTTGCAGACAATCAAGTGCTCAAGCTGTATGGTTTTAGCCATAGGGGATTGTTGAGCCCCAAGATTAAGAGGATCAGAAATGAGACAGTCTCTCCTTTGGAGTTTGTAGACAAGTTTGATATTCGCAGAACGCCAGTGGAAACCAAACCACAGAACTAG

Protein Analysis

457

Amino Acids

51.73

Weight (kDa)

6.84

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_34 PF05637 149 - 388 1.2e-65 galactosyl transferase GMA12/MNN10 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 114
AccB1I GGYRCC 1 cut(s) 865
AccI GTMKAC 3 cut(s) 121, 934, 1323
AccIII TCCGGA 2 cut(s) 38, 766
AciI CCGC 2 cut(s) 45, 48
AclWI GGATC 7 cut(s) 280, 296, 309, 478, 677, 712, 1295
AcoI YGGCCR 1 cut(s) 1118
AcyI GRCGYC 1 cut(s) 866
AfaI GTAC 1 cut(s) 433
AfiI CCNNNNNNNGG 3 cut(s) 329, 1102, 1103
AgsI TTSAA 4 cut(s) 409, 520, 805, 1192
AloI GAACNNNNNNTCC 2 cut(s) 761, 793
AluBI AGCT 6 cut(s) 225, 281, 449, 941, 1161, 1240
AluI AGCT 6 cut(s) 225, 281, 449, 941, 1161, 1240
Alw21I GWGCWC 1 cut(s) 1236
Alw26I GTCTC 4 cut(s) 257, 654, 1292, 1309
AlwI GGATC 7 cut(s) 280, 296, 309, 478, 677, 712, 1295
Ama87I CYCGRG 2 cut(s) 114, 1096
Aor13HI TCCGGA 2 cut(s) 38, 766
AoxI GGCC 4 cut(s) 884, 900, 1118, 1206
ArsI GACNNNNNNTTYG 2 cut(s) 761, 793
AspA2I CCTAGG 1 cut(s) 217
AspLEI GCGC 3 cut(s) 25, 233, 868
AspS9I GGNCC 4 cut(s) 365, 875, 884, 1206
AsuC2I CCSGG 3 cut(s) 904, 1097, 1098
AsuHPI GGTGA 4 cut(s) 344, 515, 1085, 1118
AvaI CYCGRG 2 cut(s) 114, 1096
AvaII GGWCC 2 cut(s) 365, 875
AvrII CCTAGG 1 cut(s) 217
AxyI CCTNAGG 1 cut(s) 324
BalI TGGCCA 1 cut(s) 1120
BamHI GGATCC 1 cut(s) 301
BanI GGYRCC 1 cut(s) 865
BanII GRGCYC 1 cut(s) 1274
BbsI GAAGAC 1 cut(s) 140
Bbv12I GWGCWC 1 cut(s) 1236
BbvCI CCTCAGC 1 cut(s) 824
BccI CCATC 5 cut(s) 5, 43, 673, 997, 1110
BceAI ACGGC 1 cut(s) 933
BclI TGATCA 2 cut(s) 505, 955
BcnI CCSGG 3 cut(s) 904, 1097, 1098
BcoDI GTCTC 4 cut(s) 257, 654, 1292, 1309
BfaI CTAG 7 cut(s) 218, 278, 362, 429, 729, 749, 1372
BfoI RGCGCY 2 cut(s) 234, 869
BisI GCNGC 1 cut(s) 46
BlnI CCTAGG 1 cut(s) 217
BlsI GCNGC 1 cut(s) 47
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 3 cut(s) 904, 1097, 1098
Bme18I GGWCC 2 cut(s) 365, 875
BmeT110I CYCGRG 2 cut(s) 114, 1096
BmgT120I GGNCC 4 cut(s) 365, 875, 884, 1206
BmiI GGNNCC 3 cut(s) 303, 867, 876
BmrFI CCNGG 3 cut(s) 904, 1097, 1098
BmsI GCATC 4 cut(s) 117, 226, 679, 847
BpiI GAAGAC 1 cut(s) 140
BplI GAGNNNNNCTC 2 cut(s) 1289, 1321
Bpu10I CCTNAGC 2 cut(s) 480, 824
BpuEI CTTGAG 2 cut(s) 211, 1220
BpuMI CCSGG 3 cut(s) 904, 1097, 1098
BsaAI YACGTR 1 cut(s) 194
BsaBI GATNNNNATC 3 cut(s) 300, 339, 510
BsaHI GRCGYC 1 cut(s) 866
BsaJI CCNNGG 2 cut(s) 217, 1096
BsaWI WCCGGW 3 cut(s) 38, 270, 766
BsaXI ACNNNNNCTCC 6 cut(s) 457, 487, 998, 1028, 1291, 1321
Bsc4I CCNNNNNNNGG 3 cut(s) 329, 1102, 1103
Bse118I RCCGGY 1 cut(s) 19
Bse1I ACTGG 1 cut(s) 1349
Bse21I CCTNAGG 1 cut(s) 324
Bse8I GATNNNNATC 3 cut(s) 300, 339, 510
BseAI TCCGGA 2 cut(s) 38, 766
BseDI CCNNGG 2 cut(s) 217, 1096
BseGI GGATG 5 cut(s) 35, 322, 652, 684, 1008
BseJI GATNNNNATC 3 cut(s) 300, 339, 510
BseLI CCNNNNNNNGG 3 cut(s) 329, 1102, 1103
BseMII CTCAG 5 cut(s) 273, 338, 411, 815, 1001
BseNI ACTGG 1 cut(s) 1349
BseRI GAGGAG 3 cut(s) 275, 465, 1088
BshFI GGCC 4 cut(s) 886, 902, 1120, 1208
BshNI GGYRCC 1 cut(s) 865
BsiHKAI GWGCWC 1 cut(s) 1236
BsiHKCI CYCGRG 2 cut(s) 114, 1096
BsiSI CCGG 6 cut(s) 20, 39, 271, 767, 903, 1097
BslFI GGGAC 1 cut(s) 888
BslI CCNNNNNNNGG 3 cut(s) 329, 1102, 1103
BsmAI GTCTC 4 cut(s) 257, 654, 1292, 1309
BsmFI GGGAC 1 cut(s) 888
BsnI GGCC 4 cut(s) 886, 902, 1120, 1208
BsoBI CYCGRG 2 cut(s) 114, 1096
Bsp1286I GDGCHC 2 cut(s) 1236, 1274
Bsp13I TCCGGA 2 cut(s) 38, 766
BspACI CCGC 2 cut(s) 45, 48
BspANI GGCC 4 cut(s) 886, 902, 1120, 1208
BspCNI CTCAG 5 cut(s) 274, 337, 412, 816, 1000
BspEI TCCGGA 2 cut(s) 38, 766
BspLI GGNNCC 3 cut(s) 303, 867, 876
BspPI GGATC 7 cut(s) 280, 296, 309, 478, 677, 712, 1295
BspT107I GGYRCC 1 cut(s) 865
BsrFI RCCGGY 1 cut(s) 19
BsrI ACTGG 1 cut(s) 1349
BssAI RCCGGY 1 cut(s) 19
BssECI CCNNGG 2 cut(s) 217, 1096
BssNI GRCGYC 1 cut(s) 866
BssT1I CCWWGG 1 cut(s) 217
Bst4CI ACNGT 5 cut(s) 80, 436, 711, 1152, 1303
Bst6I CTCTTC 2 cut(s) 82, 1187
BstACI GRCGYC 1 cut(s) 866
BstBAI YACGTR 1 cut(s) 194
BstC8I GCNNGC 2 cut(s) 21, 607
BstDEI CTNAG 7 cut(s) 282, 324, 369, 420, 480, 824, 987
BstEII GGTNACC 1 cut(s) 212
BstENI CCTNNNNNAGG 1 cut(s) 327
BstF5I GGATG 5 cut(s) 35, 322, 652, 684, 1008
BstH2I RGCGCY 2 cut(s) 234, 869
BstHHI GCGC 3 cut(s) 25, 233, 868
BstMAI GTCTC 4 cut(s) 257, 654, 1292, 1309
BstMWI GCNNNNNNNGC 2 cut(s) 947, 1172
BstPI GGTNACC 1 cut(s) 212
BstSCI CCNGG 3 cut(s) 902, 1095, 1096
BstV2I GAAGAC 1 cut(s) 140
BstX2I RGATCY 5 cut(s) 285, 301, 470, 669, 717
BstXI CCANNNNNNTGG 1 cut(s) 1139
BstYI RGATCY 5 cut(s) 285, 301, 470, 669, 717
Bsu36I CCTNAGG 1 cut(s) 324
BsuRI GGCC 4 cut(s) 886, 902, 1120, 1208
BtsCI GGATG 5 cut(s) 35, 322, 652, 684, 1008
BtsIMutI CAGTG 3 cut(s) 699, 842, 1356
Cac8I GCNNGC 2 cut(s) 21, 607
CfoI GCGC 3 cut(s) 25, 233, 868
Cfr10I RCCGGY 1 cut(s) 19
Cfr13I GGNCC 4 cut(s) 365, 875, 884, 1206
Cfr9I CCCGGG 1 cut(s) 1096
Csp6I GTAC 1 cut(s) 432
CviAII CATG 4 cut(s) 557, 580, 758, 999
CviQI GTAC 1 cut(s) 432
DdeI CTNAG 7 cut(s) 282, 324, 369, 420, 480, 824, 987
DinI GGCGCC 1 cut(s) 867
EaeI YGGCCR 1 cut(s) 1118
Eam1104I CTCTTC 2 cut(s) 82, 1187
EarI CTCTTC 2 cut(s) 82, 1187
EciI GGCGGA 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 217
Eco24I GRGCYC 1 cut(s) 1274
Eco47I GGWCC 2 cut(s) 365, 875
Eco81I CCTNAGG 1 cut(s) 324
Eco88I CYCGRG 2 cut(s) 114, 1096
Eco91I GGTNACC 1 cut(s) 212
EcoNI CCTNNNNNAGG 1 cut(s) 327
EcoO109I RGGNCCY 3 cut(s) 365, 875, 1206
EcoO65I GGTNACC 1 cut(s) 212
EcoT14I CCWWGG 1 cut(s) 217
EcoT38I GRGCYC 1 cut(s) 1274
EgeI GGCGCC 1 cut(s) 867
EheI GGCGCC 1 cut(s) 867
ErhI CCWWGG 1 cut(s) 217
FaeI CATG 4 cut(s) 560, 583, 761, 1002
FaqI GGGAC 1 cut(s) 888
FatI CATG 4 cut(s) 556, 579, 757, 998
FbaI TGATCA 2 cut(s) 505, 955
FblI GTMKAC 3 cut(s) 121, 934, 1323
Fnu4HI GCNGC 1 cut(s) 46
FokI GGATG 5 cut(s) 22, 329, 639, 691, 1015
FriOI GRGCYC 1 cut(s) 1274
Fsp4HI GCNGC 1 cut(s) 46
FspBI CTAG 7 cut(s) 218, 278, 362, 429, 729, 749, 1372
GlaI GCGC 3 cut(s) 24, 232, 867
GluI GCNGC 1 cut(s) 46
HaeII RGCGCY 2 cut(s) 234, 869
HaeIII GGCC 4 cut(s) 886, 902, 1120, 1208
HapII CCGG 6 cut(s) 20, 39, 271, 767, 903, 1097
HhaI GCGC 3 cut(s) 25, 233, 868
Hin1I GRCGYC 1 cut(s) 866
Hin1II CATG 4 cut(s) 560, 583, 761, 1002
Hin6I GCGC 3 cut(s) 23, 231, 866
HinP1I GCGC 3 cut(s) 23, 231, 866
HincII GTYRAC 3 cut(s) 72, 244, 392
HindII GTYRAC 3 cut(s) 72, 244, 392
HinfI GANTC 8 cut(s) 274, 296, 340, 409, 415, 453, 754, 1024
HpaI GTTAAC 2 cut(s) 72, 244
HpaII CCGG 6 cut(s) 20, 39, 271, 767, 903, 1097
HphI GGTGA 4 cut(s) 344, 515, 1085, 1118
Hpy166II GTNNAC 8 cut(s) 72, 122, 244, 392, 699, 935, 1148, 1324
Hpy188III TCNNGA 9 cut(s) 8, 39, 151, 326, 419, 656, 767, 893, 1180
Hpy8I GTNNAC 8 cut(s) 72, 122, 244, 392, 699, 935, 1148, 1324
Hpy99I CGWCG 4 cut(s) 64, 67, 70, 355
HpyAV CCTTC 3 cut(s) 323, 901, 1046
HpyCH4III ACNGT 5 cut(s) 80, 436, 711, 1152, 1303
HpyCH4IV ACGT 5 cut(s) 68, 137, 193, 353, 394
HpyCH4V TGCA 5 cut(s) 130, 239, 1039, 1175, 1220
HpyF10VI GCNNNNNNNGC 2 cut(s) 947, 1172
HpyF3I CTNAG 7 cut(s) 282, 324, 369, 420, 480, 824, 987
HpySE526I ACGT 5 cut(s) 68, 137, 193, 353, 394
Hsp92I GRCGYC 1 cut(s) 866
Hsp92II CATG 4 cut(s) 560, 583, 761, 1002
HspAI GCGC 3 cut(s) 23, 231, 866
KasI GGCGCC 1 cut(s) 865
Kpn2I TCCGGA 2 cut(s) 38, 766
KroI GCCGGC 1 cut(s) 19
KroNI GCCGGC 1 cut(s) 21
Ksp22I TGATCA 2 cut(s) 505, 955
KspAI GTTAAC 2 cut(s) 72, 244
LweI GCATC 4 cut(s) 117, 226, 679, 847
MaeI CTAG 7 cut(s) 218, 278, 362, 429, 729, 749, 1372
MaeII ACGT 5 cut(s) 68, 137, 193, 353, 394
MaeIII GTNAC 4 cut(s) 108, 175, 212, 1126
MboII GAAGA 4 cut(s) 99, 145, 541, 1204
MflI RGATCY 5 cut(s) 285, 301, 470, 669, 717
MhlI GDGCHC 2 cut(s) 1236, 1274
MlsI TGGCCA 1 cut(s) 1120
MluCI AATT 7 cut(s) 159, 180, 561, 620, 829, 888, 1213
MluNI TGGCCA 1 cut(s) 1120
Mly113I GGCGCC 1 cut(s) 866
MmeI TCCRAC 3 cut(s) 83, 329, 825
Mox20I TGGCCA 1 cut(s) 1120
MreI CGCCGGCG 1 cut(s) 19
MroI TCCGGA 2 cut(s) 38, 766
MroNI GCCGGC 1 cut(s) 19
MscI TGGCCA 1 cut(s) 1120
MseI TTAA 6 cut(s) 71, 141, 243, 464, 1212, 1281
Msp20I TGGCCA 1 cut(s) 1120
MspI CCGG 6 cut(s) 20, 39, 271, 767, 903, 1097
MspR9I CCNGG 3 cut(s) 904, 1097, 1098
MwoI GCNNNNNNNGC 2 cut(s) 947, 1172
NaeI GCCGGC 1 cut(s) 21
NarI GGCGCC 1 cut(s) 866
NciI CCSGG 3 cut(s) 904, 1097, 1098
NgoMIV GCCGGC 1 cut(s) 19
NlaIII CATG 4 cut(s) 560, 583, 761, 1002
NlaIV GGNNCC 3 cut(s) 303, 867, 876
NmuCI GTSAC 2 cut(s) 175, 1126
PaeR7I CTCGAG 1 cut(s) 114
PdiI GCCGGC 1 cut(s) 21
PfeI GAWTC 8 cut(s) 274, 296, 340, 409, 415, 453, 754, 1024
PkrI GCNGC 1 cut(s) 47
PluTI GGCGCC 1 cut(s) 869
Ppu21I YACGTR 1 cut(s) 194
PpuMI RGGWCCY 2 cut(s) 365, 875
Psp5II RGGWCCY 2 cut(s) 365, 875
PspEI GGTNACC 1 cut(s) 212
PspN4I GGNNCC 3 cut(s) 303, 867, 876
PspPI GGNCC 4 cut(s) 365, 875, 884, 1206
PspPPI RGGWCCY 2 cut(s) 365, 875
PspXI VCTCGAGB 1 cut(s) 114
PsuI RGATCY 5 cut(s) 285, 301, 470, 669, 717
RsaI GTAC 1 cut(s) 433
RsaNI GTAC 1 cut(s) 432
SaqAI TTAA 6 cut(s) 71, 141, 243, 464, 1212, 1281
SatI GCNGC 1 cut(s) 46
Sau96I GGNCC 4 cut(s) 365, 875, 884, 1206
ScaI AGTACT 1 cut(s) 433
ScrFI CCNGG 3 cut(s) 904, 1097, 1098
SduI GDGCHC 2 cut(s) 1236, 1274
SfaNI GCATC 4 cut(s) 117, 226, 679, 847
SfoI GGCGCC 1 cut(s) 867
Sfr274I CTCGAG 1 cut(s) 114
SgrAI CRCCGGYG 1 cut(s) 19
SinI GGWCC 2 cut(s) 365, 875
SlaI CTCGAG 1 cut(s) 114
SmaI CCCGGG 1 cut(s) 1098
SmlI CTYRAG 3 cut(s) 114, 226, 1235
SmoI CTYRAG 3 cut(s) 114, 226, 1235
Sse9I AATT 7 cut(s) 159, 180, 561, 620, 829, 888, 1213
SsiI CCGC 2 cut(s) 45, 48
SspDI GGCGCC 1 cut(s) 865
SspMI CTAG 7 cut(s) 218, 278, 362, 429, 729, 749, 1372
StyD4I CCNGG 3 cut(s) 902, 1095, 1096
StyI CCWWGG 1 cut(s) 217
TaaI ACNGT 5 cut(s) 80, 436, 711, 1152, 1303
TaiI ACGT 5 cut(s) 71, 140, 196, 356, 397
TaqI TCGA 4 cut(s) 115, 451, 780, 1179
TasI AATT 7 cut(s) 159, 180, 561, 620, 829, 888, 1213
TatI WGTACW 1 cut(s) 431
TauI GCSGC 1 cut(s) 48
TfiI GAWTC 8 cut(s) 274, 296, 340, 409, 415, 453, 754, 1024
Tru1I TTAA 6 cut(s) 71, 141, 243, 464, 1212, 1281
Tru9I TTAA 6 cut(s) 71, 141, 243, 464, 1212, 1281
TscAI CASTG 3 cut(s) 706, 842, 1356
TseFI GTSAC 2 cut(s) 175, 1126
Tsp45I GTSAC 2 cut(s) 175, 1126
TspDTI ATGAA 3 cut(s) 353, 545, 746
TspGWI ACGGA 1 cut(s) 392
TspMI CCCGGG 1 cut(s) 1096
TspRI CASTG 3 cut(s) 706, 842, 1356
VpaK11BI GGWCC 2 cut(s) 365, 875
XagI CCTNNNNNAGG 1 cut(s) 327
XcmI CCANNNNNNNNNTGG 1 cut(s) 663
XhoI CTCGAG 1 cut(s) 114
XmaI CCCGGG 1 cut(s) 1096
XmaJI CCTAGG 1 cut(s) 217
XmiI GTMKAC 3 cut(s) 121, 934, 1323
XspI CTAG 7 cut(s) 218, 278, 362, 429, 729, 749, 1372
ZrmI AGTACT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.