Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005095

Physical Location & Seq

Genomic Coordinates Reverse (-)

63828391 .. 63830625

Gene Structure 2235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00271500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGGTCAGGACAATTTCACGCCCCAGAAGCGGAGCTCAAGTGGGCTACCCACCACCACCGCCACCGGCACCTCAGCCCGAGCAGCCTCCGCCGGCCGCGTCCTTCCACGTGGCCGCCAGATCCAGAAGACGTTCAACAACATCAAAATCACCATCCTCTGCGGCTTCGTCACCATCCTGGTCCTACGCGGCACCATCGGAGTGGGCAACCTCGGCAGCTCCGAGGCCGACGCCGTCAACCAGAACTTAATCGAGGAGACGAATCGGATCCTGGCCGAGATCCGATCCGACAGCGACCCCAACGACCCGGACGAGTTCATCAACGGCACCCAGAGCAGTAACCCGAACGTGACGTACACGCTCGGACCCAAGATCGGGAATTGGGACGCGGAGAGAAGGCGGTGGCTGCAGTCGAACCCGGAGTTTCCGAGCTTGGTGAACGGTAAGCCTAGGGTTCTGTTGGTTACCGGGTCTCCTCCTAAGCCTTGTGACAACCCGATTGGAGACCATTATTTGTTGAAGGCTATAAAGAACAAGATCGATTATTGTAGGCTTCATGGGATTGAGATTGTTTATAATTTAGCTCATTTGGATATGGAGCTTGCTGGGTATTGGGCCAAGTTGCCTTTGATTAGGAAGCTGATGCTTTCGCATCCCGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTATGTTTACTGATATGGTGTTTGAGATCCCATTGGGGAAGTATGATAAGCATAATCTTGTTATTCATGGCTACCCGGATTTGCTGTTTGATCAGAAGTCTTGGATTGCTTTGAATACTGGGAGTTTTCTGTTTAGGAATTGCCAGTGGTCTTTGGATTTGCTTGATGCTTGGGCTCCGATGGGTCCCAAGGGGCCGATAAGAGAGGAGGCCGGGAAGGTTTTGACGGCGAATTTGAAGGGGAGGCCGGCGTTTGAGGCGGATGATCAGTCTGCATTGATATACTTGTTGCTGTCGCAGAAGGATCTGTGGATGGAGAAGGTTTTTGTGGAGAATTCGTATTACTTGCACGGATATTGGGCTGGATTGGTGGATCGGTATGAGGAGATGATAGAGAAGTATCACCCGGGGTTGGGGGATGAGAGGTGGCCGTTTGTGACACATTTTGTGGGTTGCAAGCCTTGTGGGAGTTATGGGGATTATCCGGTGGAGAGGTGCTTGAGCAGCATGGAGAGGGCTTTCAATTTTGCGGATAACCAGGTGCTTAAGCTTTACGGGTTTAGGCACAGGGGCTTGTTGAGTCCCAAGATCAAGAGGATCAGGAATGAGACGGCTACTCCGTTGGAGTCTGTCGACCAGTTTGATATTCGGCGGCATCCAGTGCAGGGGAGCAGTGGATCGCACAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006073 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009888 GO:0009969 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010383 GO:0010410 GO:0010411 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033692 GO:0033843 GO:0034637 GO:0034645 GO:0035252 GO:0040007 GO:0042285 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0060560 GO:0071554 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0098588 GO:0098791 GO:0099402 GO:1901576 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_34

Protein Analysis

459

Amino Acids

51.89

Weight (kDa)

6.65

Isoelectric Point (pI)

35.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_34	PF05637	149 - 387	1.3e-63	galactosyl transferase GMA12/MNN10 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74380 AT5G07720
fragaria_vesca	FvH4_5g14540 FvH4_5g14540
malus_domestica	MD06G1197600.v1.1 MD14G1205000.v1.1
prunus_persica	Prupe.5G198300_v2.0.a1
pyrus_communis	pycom14g16940
rosa_chinensis	RchiOBHm_Chr1g0355441 RchiOBHm_Chr6g0275691 RchiOBHm_Chr7g0182111 RchiOBHm_Chr7g0199921
rosa_laevigata	RLG00000005150 RLG00000007126 RLG00000018754 RLG00000027626 RLG00000033700
rosa_multiflora	Rmu_co8179518.1_g000001
rosa_roxburghii	Rroxscaffold_3G00271500
rosa_rugosa	Rorug06G0445700
rosa_samantha	Rh1BG320500 Rh1CG334500 Rh1DG351200 Rh6CG214000 Rh6DG203300 Rh7AG048400 Rh7BG048200 Rh7DG047600
rosa_wichuraiana	Rw0G021050 Rw7G003950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	576
AccB1I	GGYRCC	3 cut(s)	68, 191, 326
AccI	GTMKAC	1 cut(s)	1323
AccII	CGCG	3 cut(s)	99, 189, 389
AcoI	YGGCCR	4 cut(s)	94, 112, 273, 1118
AcsI	RAATTY	2 cut(s)	922, 1024
AcvI	CACGTG	1 cut(s)	110
AcyI	GRCGYC	1 cut(s)	231
AfaI	GTAC	1 cut(s)	356
AfiI	CCNNNNNNNGG	6 cut(s)	30, 374, 375, 1102, 1103, 1355
AflII	CTTAAG	1 cut(s)	1235
AgsI	TTSAA	5 cut(s)	136, 520, 805, 928, 1213
AjnI	CCWGG	3 cut(s)	177, 270, 1227
AluBI	AGCT	8 cut(s)	36, 219, 432, 584, 601, 640, 1240, 1377
AluI	AGCT	8 cut(s)	36, 219, 432, 584, 601, 640, 1240, 1377
Alw21I	GWGCWC	1 cut(s)	38
Alw26I	GTCTC	4 cut(s)	251, 477, 498, 1292
Ama87I	CYCGRG	3 cut(s)	78, 656, 1096
AoxI	GGCC	9 cut(s)	94, 112, 225, 273, 615, 884, 900, 935, 1118
ApeKI	GCWGC	4 cut(s)	83, 216, 406, 1194
ApoI	RAATTY	2 cut(s)	922, 1024
ArsI	GACNNNNNNTTYG	2 cut(s)	907, 939
Asp700I	GAANNNNTTC	1 cut(s)	131
AspA2I	CCTAGG	1 cut(s)	449
AspS9I	GGNCC	5 cut(s)	181, 365, 615, 875, 884
AsuC2I	CCSGG	7 cut(s)	308, 419, 469, 767, 904, 1097, 1098
AsuHPI	GGTGA	4 cut(s)	142, 163, 448, 1085
AvaI	CYCGRG	3 cut(s)	78, 656, 1096
AvaII	GGWCC	3 cut(s)	181, 365, 875
AvrII	CCTAGG	1 cut(s)	449
BamHI	GGATCC	1 cut(s)	267
BanI	GGYRCC	3 cut(s)	68, 191, 326
BanII	GRGCYC	2 cut(s)	38, 868
BbrPI	CACGTG	1 cut(s)	110
BbsI	GAAGAC	1 cut(s)	134
Bbv12I	GWGCWC	1 cut(s)	38
BbvCI	CCTCAGC	1 cut(s)	73
BbvI	GCAGC	4 cut(s)	95, 228, 393, 1206
BccI	CCATC	6 cut(s)	161, 182, 203, 673, 865, 997
BceAI	ACGGC	5 cut(s)	218, 340, 933, 1105, 1317
BciT130I	CCWGG	3 cut(s)	179, 272, 1229
BclI	TGATCA	2 cut(s)	781, 955
BcnI	CCSGG	7 cut(s)	308, 419, 469, 767, 904, 1097, 1098
BcoDI	GTCTC	4 cut(s)	251, 477, 498, 1292
BfaI	CTAG	2 cut(s)	450, 1378
BfmI	CTRYAG	1 cut(s)	407
BfrI	CTTAAG	1 cut(s)	1235
BisI	GCNGC	9 cut(s)	84, 97, 115, 163, 190, 217, 407, 1195, 1343
BlnI	CCTAGG	1 cut(s)	449
BlsI	GCNGC	9 cut(s)	85, 98, 116, 164, 191, 218, 408, 1196, 1344
Bme18I	GGWCC	3 cut(s)	181, 365, 875
BmeT110I	CYCGRG	3 cut(s)	78, 656, 1096
BmgT120I	GGNCC	5 cut(s)	181, 365, 615, 875, 884
BmiI	GGNNCC	9 cut(s)	70, 193, 269, 328, 367, 867, 876, 877, 885
BmrI	ACTGGG	1 cut(s)	819
BmsI	GCATC	5 cut(s)	633, 661, 679, 847, 1354
BmuI	ACTGGG	1 cut(s)	819
BpiI	GAAGAC	1 cut(s)	134
Bpu10I	CCTNAGC	2 cut(s)	73, 480
BpuEI	CTTGAG	2 cut(s)	22, 1210
BpuMI	CCSGG	7 cut(s)	308, 419, 469, 767, 904, 1097, 1098
Bsa29I	ATCGAT	1 cut(s)	540
BsaAI	YACGTR	1 cut(s)	110
BsaHI	GRCGYC	1 cut(s)	231
BsaI	GGTCTC	2 cut(s)	477, 498
BsaJI	CCNNGG	7 cut(s)	211, 222, 449, 657, 879, 1096, 1097
BsaWI	WCCGGW	1 cut(s)	1174
BsaXI	ACNNNNNCTCC	8 cut(s)	25, 55, 457, 487, 1013, 1043, 1291, 1321
Bsc4I	CCNNNNNNNGG	6 cut(s)	30, 374, 375, 1102, 1103, 1355
Bse118I	RCCGGY	3 cut(s)	65, 92, 937
Bse1I	ACTGG	4 cut(s)	814, 835, 1327, 1349
BseBI	CCWGG	3 cut(s)	179, 272, 1229
BseCI	ATCGAT	1 cut(s)	540
BseDI	CCNNGG	7 cut(s)	211, 222, 449, 657, 879, 1096, 1097
BseGI	GGATG	8 cut(s)	153, 174, 652, 684, 958, 1008, 1114, 1345
BseLI	CCNNNNNNNGG	6 cut(s)	30, 374, 375, 1102, 1103, 1355
BseMII	CTCAG	1 cut(s)	87
BseNI	ACTGG	4 cut(s)	814, 835, 1327, 1349
BseRI	GAGGAG	4 cut(s)	269, 465, 911, 1088
BseX3I	CGGCCG	1 cut(s)	94
BseXI	GCAGC	4 cut(s)	95, 228, 393, 1206
BseYI	CCCAGC	1 cut(s)	605
BsgI	GTGCAG	1 cut(s)	1373
Bsh1236I	CGCG	3 cut(s)	99, 189, 389
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	9 cut(s)	96, 114, 227, 275, 617, 886, 902, 937, 1120
BshNI	GGYRCC	3 cut(s)	68, 191, 326
BshVI	ATCGAT	1 cut(s)	540
BsiEI	CGRYCG	1 cut(s)	97
BsiHKAI	GWGCWC	1 cut(s)	38
BsiHKCI	CYCGRG	3 cut(s)	78, 656, 1096
BslFI	GGGAC	3 cut(s)	398, 861, 1257
BslI	CCNNNNNNNGG	6 cut(s)	30, 374, 375, 1102, 1103, 1355
BsmAI	GTCTC	4 cut(s)	251, 477, 498, 1292
BsmBI	CGTCTC	2 cut(s)	251, 1292
BsmFI	GGGAC	3 cut(s)	398, 861, 1257
BsnI	GGCC	9 cut(s)	96, 114, 227, 275, 617, 886, 902, 937, 1120
Bso31I	GGTCTC	2 cut(s)	477, 498
BsoBI	CYCGRG	3 cut(s)	78, 656, 1096
Bsp1286I	GDGCHC	2 cut(s)	38, 868
BspANI	GGCC	9 cut(s)	96, 114, 227, 275, 617, 886, 902, 937, 1120
BspCNI	CTCAG	1 cut(s)	86
BspDI	ATCGAT	1 cut(s)	540
BspFNI	CGCG	3 cut(s)	99, 189, 389
BspLI	GGNNCC	9 cut(s)	70, 193, 269, 328, 367, 867, 876, 877, 885
BspMAI	CTGCAG	1 cut(s)	411
BspT107I	GGYRCC	3 cut(s)	68, 191, 326
BspTI	CTTAAG	1 cut(s)	1235
BspTNI	GGTCTC	2 cut(s)	477, 498
BsrFI	RCCGGY	3 cut(s)	65, 92, 937
BsrI	ACTGG	4 cut(s)	814, 835, 1327, 1349
BssAI	RCCGGY	3 cut(s)	65, 92, 937
BssECI	CCNNGG	7 cut(s)	211, 222, 449, 657, 879, 1096, 1097
BssNI	GRCGYC	1 cut(s)	231
BssT1I	CCWWGG	2 cut(s)	449, 879
Bst2UI	CCWGG	3 cut(s)	179, 272, 1229
Bst4CI	ACNGT	1 cut(s)	443
BstACI	GRCGYC	1 cut(s)	231
BstAFI	CTTAAG	1 cut(s)	1235
BstAPI	GCANNNNNTGC	1 cut(s)	1351
BstBAI	YACGTR	1 cut(s)	110
BstC8I	GCNNGC	4 cut(s)	94, 603, 939, 1148
BstDEI	CTNAG	2 cut(s)	73, 480
BstEII	GGTNACC	1 cut(s)	463
BstF5I	GGATG	8 cut(s)	153, 174, 652, 684, 958, 1008, 1114, 1345
BstFNI	CGCG	3 cut(s)	99, 189, 389
BstMAI	GTCTC	4 cut(s)	251, 477, 498, 1292
BstMCI	CGRYCG	1 cut(s)	97
BstMWI	GCNNNNNNNGC	9 cut(s)	28, 83, 89, 213, 333, 406, 947, 1194, 1351
BstNI	CCWGG	3 cut(s)	179, 272, 1229
BstPI	GGTNACC	1 cut(s)	463
BstSFI	CTRYAG	1 cut(s)	407
BstUI	CGCG	3 cut(s)	99, 189, 389
BstV1I	GCAGC	4 cut(s)	95, 228, 393, 1206
BstV2I	GAAGAC	1 cut(s)	134
BstX2I	RGATCY	5 cut(s)	120, 267, 279, 717, 994
BstXI	CCANNNNNNTGG	1 cut(s)	202
BstYI	RGATCY	5 cut(s)	120, 267, 279, 717, 994
BstZI	CGGCCG	1 cut(s)	94
Bsu15I	ATCGAT	1 cut(s)	540
BsuRI	GGCC	9 cut(s)	96, 114, 227, 275, 617, 886, 902, 937, 1120
BsuTUI	ATCGAT	1 cut(s)	540
BtsCI	GGATG	8 cut(s)	153, 174, 652, 684, 958, 1008, 1114, 1345
BtsI	GCAGTG	1 cut(s)	1369
BtsIMutI	CAGTG	3 cut(s)	842, 1356, 1369
Cac8I	GCNNGC	4 cut(s)	94, 603, 939, 1148
Cfr10I	RCCGGY	3 cut(s)	65, 92, 937
Cfr13I	GGNCC	5 cut(s)	181, 365, 615, 875, 884
Cfr9I	CCCGGG	1 cut(s)	1096
ClaI	ATCGAT	1 cut(s)	540
CseI	GACGC	3 cut(s)	88, 239, 395
CsiI	ACCWGGT	1 cut(s)	1227
Csp6I	GTAC	1 cut(s)	355
CspCI	CAANNNNNGTGG	2 cut(s)	1135, 1170
CviAII	CATG	3 cut(s)	557, 758, 1198
CviQI	GTAC	1 cut(s)	355
DdeI	CTNAG	2 cut(s)	73, 480
EaeI	YGGCCR	4 cut(s)	94, 112, 273, 1118
EagI	CGGCCG	1 cut(s)	94
EciI	GGCGGA	2 cut(s)	79, 965
Ecl136II	GAGCTC	1 cut(s)	36
EclXI	CGGCCG	1 cut(s)	94
Eco130I	CCWWGG	2 cut(s)	449, 879
Eco24I	GRGCYC	2 cut(s)	38, 868
Eco31I	GGTCTC	2 cut(s)	477, 498
Eco47I	GGWCC	3 cut(s)	181, 365, 875
Eco52I	CGGCCG	1 cut(s)	94
Eco53kI	GAGCTC	1 cut(s)	36
Eco72I	CACGTG	1 cut(s)	110
Eco88I	CYCGRG	3 cut(s)	78, 656, 1096
Eco91I	GGTNACC	1 cut(s)	463
EcoICRI	GAGCTC	1 cut(s)	36
EcoO109I	RGGNCCY	1 cut(s)	875
EcoO65I	GGTNACC	1 cut(s)	463
EcoRI	GAATTC	1 cut(s)	1024
EcoRII	CCWGG	3 cut(s)	177, 270, 1227
EcoT14I	CCWWGG	2 cut(s)	449, 879
EcoT38I	GRGCYC	2 cut(s)	38, 868
ErhI	CCWWGG	2 cut(s)	449, 879
Esp3I	CGTCTC	2 cut(s)	251, 1292
FaeI	CATG	3 cut(s)	560, 761, 1201
FaqI	GGGAC	3 cut(s)	398, 861, 1257
FatI	CATG	3 cut(s)	556, 757, 1197
FbaI	TGATCA	2 cut(s)	781, 955
FblI	GTMKAC	1 cut(s)	1323
Fnu4HI	GCNGC	9 cut(s)	84, 97, 115, 163, 190, 217, 407, 1195, 1343
FokI	GGATG	8 cut(s)	140, 161, 639, 691, 965, 1015, 1121, 1332
FriOI	GRGCYC	2 cut(s)	38, 868
Fsp4HI	GCNGC	9 cut(s)	84, 97, 115, 163, 190, 217, 407, 1195, 1343
FspBI	CTAG	2 cut(s)	450, 1378
GluI	GCNGC	9 cut(s)	84, 97, 115, 163, 190, 217, 407, 1195, 1343
GsaI	CCCAGC	1 cut(s)	609
HaeIII	GGCC	9 cut(s)	96, 114, 227, 275, 617, 886, 902, 937, 1120
HgaI	GACGC	3 cut(s)	88, 239, 395
Hin1I	GRCGYC	1 cut(s)	231
Hin1II	CATG	3 cut(s)	560, 761, 1201
HincII	GTYRAC	2 cut(s)	238, 1324
HindII	GTYRAC	2 cut(s)	238, 1324
HindIII	AAGCTT	1 cut(s)	1238
HinfI	GANTC	3 cut(s)	262, 1270, 1316
HphI	GGTGA	4 cut(s)	142, 163, 448, 1085
Hpy166II	GTNNAC	5 cut(s)	238, 357, 439, 699, 1324
Hpy188I	TCNGA	9 cut(s)	200, 223, 267, 284, 289, 365, 429, 786, 870
Hpy188III	TCNNGA	6 cut(s)	8, 124, 376, 656, 1282, 1291
Hpy8I	GTNNAC	5 cut(s)	238, 357, 439, 699, 1324
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	7 cut(s)	113, 390, 514, 901, 922, 985, 1003
HpyCH4III	ACNGT	1 cut(s)	443
HpyCH4IV	ACGT	4 cut(s)	109, 131, 348, 353
HpyCH4V	TGCA	5 cut(s)	409, 965, 1039, 1146, 1354
HpyF10VI	GCNNNNNNNGC	9 cut(s)	28, 83, 89, 213, 333, 406, 947, 1194, 1351
HpyF3I	CTNAG	2 cut(s)	73, 480
HpySE526I	ACGT	4 cut(s)	109, 131, 348, 353
Hsp92I	GRCGYC	1 cut(s)	231
Hsp92II	CATG	3 cut(s)	560, 761, 1201
KflI	GGGWCCC	1 cut(s)	875
KroI	GCCGGC	2 cut(s)	92, 937
KroNI	GCCGGC	2 cut(s)	94, 939
Ksp22I	TGATCA	2 cut(s)	781, 955
LmnI	GCTCC	5 cut(s)	33, 224, 598, 871, 1359
Lsp1109I	GCAGC	4 cut(s)	95, 228, 393, 1206
LweI	GCATC	5 cut(s)	633, 661, 679, 847, 1354
MabI	ACCWGGT	1 cut(s)	1227
MaeI	CTAG	2 cut(s)	450, 1378
MaeII	ACGT	4 cut(s)	109, 131, 348, 353
MaeIII	GTNAC	6 cut(s)	169, 338, 349, 463, 488, 1126
MboII	GAAGA	1 cut(s)	139
MflI	RGATCY	5 cut(s)	120, 267, 279, 717, 994
MhlI	GDGCHC	2 cut(s)	38, 868
MluCI	AATT	7 cut(s)	13, 379, 577, 829, 922, 1024, 1213
MlyI	GAGTC	2 cut(s)	1279, 1325
MmeI	TCCRAC	2 cut(s)	312, 1293
MroNI	GCCGGC	2 cut(s)	92, 937
MroXI	GAANNNNTTC	1 cut(s)	131
MseI	TTAA	2 cut(s)	248, 1236
MslI	CAYNNNNRTG	1 cut(s)	200
MspCI	CTTAAG	1 cut(s)	1235
MvaI	CCWGG	3 cut(s)	179, 272, 1229
MvnI	CGCG	3 cut(s)	99, 189, 389
MwoI	GCNNNNNNNGC	9 cut(s)	28, 83, 89, 213, 333, 406, 947, 1194, 1351
NaeI	GCCGGC	2 cut(s)	94, 939
NciI	CCSGG	7 cut(s)	308, 419, 469, 767, 904, 1097, 1098
NgoMIV	GCCGGC	2 cut(s)	92, 937
NlaIII	CATG	3 cut(s)	560, 761, 1201
NlaIV	GGNNCC	9 cut(s)	70, 193, 269, 328, 367, 867, 876, 877, 885
NmeAIII	GCCGAG	2 cut(s)	192, 301
NmuCI	GTSAC	4 cut(s)	169, 349, 488, 1126
PcsI	WCGNNNNNNNCGW	3 cut(s)	219, 309, 1307
PdiI	GCCGGC	2 cut(s)	94, 939
PdmI	GAANNNNTTC	1 cut(s)	131
PfeI	GAWTC	1 cut(s)	262
PflFI	GACNNNGTC	1 cut(s)	233
PkrI	GCNGC	9 cut(s)	85, 98, 116, 164, 191, 218, 408, 1196, 1344
PleI	GAGTC	2 cut(s)	1278, 1324
PmaCI	CACGTG	1 cut(s)	110
PmlI	CACGTG	1 cut(s)	110
PpsI	GAGTC	2 cut(s)	1278, 1324
Ppu21I	YACGTR	1 cut(s)	110
PpuMI	RGGWCCY	1 cut(s)	875
PsiI	TTATAA	1 cut(s)	576
Psp124BI	GAGCTC	1 cut(s)	38
Psp5II	RGGWCCY	1 cut(s)	875
Psp6I	CCWGG	3 cut(s)	177, 270, 1227
PspCI	CACGTG	1 cut(s)	110
PspEI	GGTNACC	1 cut(s)	463
PspFI	CCCAGC	1 cut(s)	605
PspGI	CCWGG	3 cut(s)	177, 270, 1227
PspN4I	GGNNCC	9 cut(s)	70, 193, 269, 328, 367, 867, 876, 877, 885
PspPI	GGNCC	5 cut(s)	181, 365, 615, 875, 884
PspPPI	RGGWCCY	1 cut(s)	875
PsrI	GAACNNNNNNTAC	2 cut(s)	338, 370
PstI	CTGCAG	1 cut(s)	411
PsuI	RGATCY	5 cut(s)	120, 267, 279, 717, 994
PsyI	GACNNNGTC	1 cut(s)	233
RsaI	GTAC	1 cut(s)	356
RsaNI	GTAC	1 cut(s)	355
RseI	CAYNNNNRTG	1 cut(s)	200
SacI	GAGCTC	1 cut(s)	38
SalI	GTCGAC	1 cut(s)	1322
SaqAI	TTAA	2 cut(s)	248, 1236
SatI	GCNGC	9 cut(s)	84, 97, 115, 163, 190, 217, 407, 1195, 1343
Sau96I	GGNCC	5 cut(s)	181, 365, 615, 875, 884
SchI	GAGTC	2 cut(s)	1279, 1325
SduI	GDGCHC	2 cut(s)	38, 868
SexAI	ACCWGGT	1 cut(s)	1227
SfaNI	GCATC	5 cut(s)	633, 661, 679, 847, 1354
SfcI	CTRYAG	1 cut(s)	407
SinI	GGWCC	3 cut(s)	181, 365, 875
SmaI	CCCGGG	1 cut(s)	1098
SmiMI	CAYNNNNRTG	1 cut(s)	200
SmlI	CTYRAG	3 cut(s)	37, 1189, 1235
SmoI	CTYRAG	3 cut(s)	37, 1189, 1235
Sse9I	AATT	7 cut(s)	13, 379, 577, 829, 922, 1024, 1213
SspMI	CTAG	2 cut(s)	450, 1378
SstI	GAGCTC	1 cut(s)	38
StyI	CCWWGG	2 cut(s)	449, 879
TaaI	ACNGT	1 cut(s)	443
TaiI	ACGT	4 cut(s)	112, 134, 351, 356
TaqI	TCGA	4 cut(s)	252, 413, 540, 1323
TasI	AATT	7 cut(s)	13, 379, 577, 829, 922, 1024, 1213
TauI	GCSGC	5 cut(s)	99, 117, 165, 192, 1345
TfiI	GAWTC	1 cut(s)	262
Tru1I	TTAA	2 cut(s)	248, 1236
Tru9I	TTAA	2 cut(s)	248, 1236
TscAI	CASTG	3 cut(s)	842, 1356, 1369
TseFI	GTSAC	4 cut(s)	169, 349, 488, 1126
TseI	GCWGC	4 cut(s)	83, 216, 406, 1194
Tsp45I	GTSAC	4 cut(s)	169, 349, 488, 1126
TspDTI	ATGAA	3 cut(s)	307, 545, 746
TspGWI	ACGGA	2 cut(s)	1056, 1299
TspMI	CCCGGG	1 cut(s)	1096
TspRI	CASTG	3 cut(s)	842, 1356, 1369
Tth111I	GACNNNGTC	1 cut(s)	233
Vha464I	CTTAAG	1 cut(s)	1235
VpaK11BI	GGWCC	3 cut(s)	181, 365, 875
XapI	RAATTY	2 cut(s)	922, 1024
XmaI	CCCGGG	1 cut(s)	1096
XmaJI	CCTAGG	1 cut(s)	449
XmiI	GTMKAC	1 cut(s)	1323
XmnI	GAANNNNTTC	1 cut(s)	131
XspI	CTAG	2 cut(s)	450, 1378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.