AT1G75080

brassinazole-resistant

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
28185504 .. 28188075
2572 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G75080.2

Sequence Viewer

Length: 1011 bp
ATGACTTCGGATGGAGCTACGTCGACATCAGCAGCTGCAGCTGCGGCGGCGGCAGCAGCGGCGAGGAGGAAGCCGTCGTGGAGAGAAAGGGAGAATAATCGGAGGAGAGAAAGACGGAGAAGAGCTGTAGCTGCGAAGATATACACTGGGCTTAGAGCTCAAGGTGATTATAATTTGCCTAAACATTGTGATAATAATGAAGTCCTTAAAGCTCTTTGTGTTGAAGCTGGTTGGGTTGTTGAAGAAGATGGTACTACTTATCGCAAGGGATGCAAGCCTTTACCTGGTGAGATAGCTGGGACTTCATCTCGAGTAACTCCATATTCATCACAGAACCAGAGCCCTCTTTCATCAGCCTTTCAAAGTCCCATCCCATCTTACCAAGTTAGCCCGTCTTCTTCATCATTCCCGAGTCCTTCTCGCGGTGAACCAAATAACAACATGTCCTCTACATTCTTCCCTTTCCTCAGAAATGGTGGCATTCCTTCTTCTCTTCCTTCCCTCAGAATCTCAAACAGTTGTCCAGTTACCCCACCGGTCTCATCGCCGACTTCTAAGAACCCGAAACCGTTGCCTAACTGGGAATCTATCGCTAAGCAATCCATGGCCATTGCTAAACAATCAATGGCGTCTTTTAATTATCCTTTCTATGCGGTTTCTGCACCTGCTAGTCCGACACATCGCCACCAGTTTCATACCCCGGCTACTATACCTGAATGTGATGAGTCTGACTCTTCCACTGTTGATTCTGGTCATTGGATAAGCTTTCAGAAGTTTGCACAACAACAGCCATTCTCTGCCTCTATGGTGCCAACCTCTCCTACCTTCAATCTTGTGAAACCTGCGCCTCAGCAGATGTCTCCAAATACTGCTGCCTTCCAAGAGATTGGTCAAAGCTCTGAGTTTAAATTTGAGAATAGCCAAGTTAAACCCTGGGAAGGAGAGAGGATACATGATGTGGGTATGGAGGATCTTGAGCTTACACTTGGAAATGGGAAGGCTCGTGGTTGA

Protein Analysis

336

Amino Acids

36.49

Weight (kDa)

9.19

Isoelectric Point (pI)

75.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BES1_N PF05687 21 - 144 1.8e-62 BES1/BZR1 plant transcription factor, N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 171
AarI CACCTGC 1 cut(s) 673
Acc36I ACCTGC 2 cut(s) 673, 850
AccB1I GGYRCC 1 cut(s) 808
AccI GTMKAC 1 cut(s) 23
AccII CGCG 1 cut(s) 423
AciI CCGC 6 cut(s) 44, 47, 50, 59, 423, 653
AclWI GGATC 1 cut(s) 978
AcoI YGGCCR 1 cut(s) 606
AcsI RAATTY 1 cut(s) 908
AcyI GRCGYC 1 cut(s) 629
AfaI GTAC 1 cut(s) 253
AfiI CCNNNNNNNGG 3 cut(s) 284, 422, 938
AflIII ACRYGT 1 cut(s) 441
AgeI ACCGGT 1 cut(s) 535
AgsI TTSAA 4 cut(s) 224, 242, 362, 829
AjnI CCWGG 2 cut(s) 283, 932
Alw21I GWGCWC 1 cut(s) 160
Alw26I GTCTC 2 cut(s) 544, 864
AlwI GGATC 1 cut(s) 978
AlwNI CAGNNNCTG 1 cut(s) 35
Ama87I CYCGRG 2 cut(s) 309, 409
AoxI GGCC 1 cut(s) 606
ApeKI GCWGC 8 cut(s) 32, 35, 38, 41, 53, 56, 131, 872
ApoI RAATTY 1 cut(s) 908
AsiGI ACCGGT 1 cut(s) 535
AspLEI GCGC 1 cut(s) 847
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 3 cut(s) 176, 299, 437
AvaI CYCGRG 2 cut(s) 309, 409
BalI TGGCCA 1 cut(s) 608
BanI GGYRCC 1 cut(s) 808
BanII GRGCYC 2 cut(s) 160, 344
BauI CACGAG 1 cut(s) 1002
BbsI GAAGAC 1 cut(s) 387
Bbv12I GWGCWC 1 cut(s) 160
BbvCI CCTCAGC 1 cut(s) 849
BbvI GCAGC 8 cut(s) 22, 28, 44, 50, 65, 68, 118, 859
BccI CCATC 4 cut(s) 5, 242, 377, 382
BceAI ACGGC 1 cut(s) 58
BcgI CGANNNNNNTGC 2 cut(s) 553, 587
BciT130I CCWGG 2 cut(s) 285, 934
BciVI GTATCC 1 cut(s) 942
BcnI CCSGG 1 cut(s) 701
BcoDI GTCTC 2 cut(s) 544, 864
BfaI CTAG 1 cut(s) 669
BfmI CTRYAG 2 cut(s) 36, 126
BfuAI ACCTGC 2 cut(s) 673, 850
BfuI GTATCC 1 cut(s) 942
BlpI GCTNAGC 1 cut(s) 594
Bme1390I CCNGG 3 cut(s) 285, 701, 934
BmeT110I CYCGRG 2 cut(s) 309, 409
BmiI GGNNCC 1 cut(s) 810
BmrFI CCNGG 3 cut(s) 285, 701, 934
BmrI ACTGGG 2 cut(s) 156, 589
BmsI GCATC 1 cut(s) 260
BmuI ACTGGG 2 cut(s) 156, 589
BpiI GAAGAC 1 cut(s) 387
BplI GAGNNNNNCTC 4 cut(s) 403, 435, 716, 748
Bpu10I CCTNAGC 1 cut(s) 849
Bpu1102I GCTNAGC 1 cut(s) 594
BpuEI CTTGAG 2 cut(s) 144, 995
BpuMI CCSGG 1 cut(s) 701
BsaHI GRCGYC 1 cut(s) 629
BsaI GGTCTC 1 cut(s) 544
BsaJI CCNNGG 4 cut(s) 603, 699, 932, 933
BsaWI WCCGGW 1 cut(s) 535
Bsc4I CCNNNNNNNGG 3 cut(s) 284, 422, 938
Bse118I RCCGGY 1 cut(s) 535
Bse1I ACTGG 4 cut(s) 151, 524, 584, 688
Bse3DI GCAATG 1 cut(s) 609
BseBI CCWGG 2 cut(s) 285, 934
BseDI CCNNGG 4 cut(s) 603, 699, 932, 933
BseGI GGATG 3 cut(s) 16, 275, 369
BseLI CCNNNNNNNGG 3 cut(s) 284, 422, 938
BseMI GCAATG 1 cut(s) 609
BseMII CTCAG 4 cut(s) 481, 517, 863, 891
BseNI ACTGG 4 cut(s) 151, 524, 584, 688
BseRI GAGGAG 2 cut(s) 79, 118
BseXI GCAGC 8 cut(s) 22, 28, 44, 50, 65, 68, 118, 859
BseYI CCCAGC 1 cut(s) 296
BsgI GTGCAG 1 cut(s) 645
Bsh1236I CGCG 1 cut(s) 423
BshFI GGCC 1 cut(s) 608
BshNI GGYRCC 1 cut(s) 808
BshTI ACCGGT 1 cut(s) 535
BsiHKAI GWGCWC 1 cut(s) 160
BsiHKCI CYCGRG 2 cut(s) 309, 409
BsiSI CCGG 2 cut(s) 536, 701
BslFI GGGAC 2 cut(s) 313, 351
BslI CCNNNNNNNGG 3 cut(s) 284, 422, 938
BsmAI GTCTC 2 cut(s) 544, 864
BsmFI GGGAC 2 cut(s) 313, 351
BsmI GAATGC 1 cut(s) 480
BsnI GGCC 1 cut(s) 608
Bso31I GGTCTC 1 cut(s) 544
BsoBI CYCGRG 2 cut(s) 309, 409
Bsp1286I GDGCHC 2 cut(s) 160, 344
Bsp143I GATC 1 cut(s) 970
Bsp1720I GCTNAGC 1 cut(s) 594
Bsp19I CCATGG 1 cut(s) 603
BspACI CCGC 6 cut(s) 44, 47, 50, 59, 423, 653
BspANI GGCC 1 cut(s) 608
BspCNI CTCAG 4 cut(s) 480, 516, 862, 892
BspFNI CGCG 1 cut(s) 423
BspLI GGNNCC 1 cut(s) 810
BspMAI CTGCAG 1 cut(s) 40
BspMI ACCTGC 2 cut(s) 673, 850
BspPI GGATC 1 cut(s) 978
BspQI GCTCTTC 1 cut(s) 115
BspT107I GGYRCC 1 cut(s) 808
BspTNI GGTCTC 1 cut(s) 544
BsrDI GCAATG 1 cut(s) 609
BsrFI RCCGGY 1 cut(s) 535
BsrI ACTGG 4 cut(s) 151, 524, 584, 688
BssAI RCCGGY 1 cut(s) 535
BssECI CCNNGG 4 cut(s) 603, 699, 932, 933
BssMI GATC 1 cut(s) 970
BssNI GRCGYC 1 cut(s) 629
BssSI CACGAG 1 cut(s) 1002
BssT1I CCWWGG 1 cut(s) 603
Bst2BI CACGAG 1 cut(s) 1002
Bst2UI CCWGG 2 cut(s) 285, 934
Bst4CI ACNGT 3 cut(s) 518, 570, 742
Bst6I CTCTTC 3 cut(s) 115, 498, 739
BstACI GRCGYC 1 cut(s) 629
BstAPI GCANNNNNTGC 1 cut(s) 270
BstC8I GCNNGC 1 cut(s) 275
BstDEI CTNAG 7 cut(s) 152, 467, 503, 555, 594, 849, 900
BstDSI CCRYGG 1 cut(s) 603
BstF5I GGATG 3 cut(s) 16, 275, 369
BstFNI CGCG 1 cut(s) 423
BstHHI GCGC 1 cut(s) 847
BstKTI GATC 1 cut(s) 973
BstMAI GTCTC 2 cut(s) 544, 864
BstMBI GATC 1 cut(s) 970
BstNI CCWGG 2 cut(s) 285, 934
BstNSI RCATGY 1 cut(s) 445
BstSCI CCNGG 3 cut(s) 283, 699, 932
BstSFI CTRYAG 2 cut(s) 36, 126
BstUI CGCG 1 cut(s) 423
BstV1I GCAGC 8 cut(s) 22, 28, 44, 50, 65, 68, 118, 859
BstV2I GAAGAC 1 cut(s) 387
BstX2I RGATCY 1 cut(s) 970
BstXI CCANNNNNNTGG 1 cut(s) 887
BstYI RGATCY 1 cut(s) 970
BsuI GTATCC 1 cut(s) 942
BsuRI GGCC 1 cut(s) 608
BtgI CCRYGG 1 cut(s) 603
BtgZI GCGATG 2 cut(s) 528, 665
BtsCI GGATG 3 cut(s) 16, 275, 369
BtsIMutI CAGTG 2 cut(s) 144, 738
BveI ACCTGC 2 cut(s) 673, 850
Cac8I GCNNGC 1 cut(s) 275
CaiI CAGNNNCTG 1 cut(s) 35
CfoI GCGC 1 cut(s) 847
Cfr10I RCCGGY 1 cut(s) 535
CseI GACGC 1 cut(s) 618
CsiI ACCWGGT 1 cut(s) 283
Csp6I GTAC 1 cut(s) 252
CspAI ACCGGT 1 cut(s) 535
CviAII CATG 3 cut(s) 442, 604, 953
CviQI GTAC 1 cut(s) 252
DdeI CTNAG 7 cut(s) 152, 467, 503, 555, 594, 849, 900
DpnI GATC 1 cut(s) 972
DpnII GATC 1 cut(s) 970
DraI TTTAAA 1 cut(s) 907
EaeI YGGCCR 1 cut(s) 606
Eam1104I CTCTTC 3 cut(s) 115, 498, 739
EarI CTCTTC 3 cut(s) 115, 498, 739
Ecl136II GAGCTC 1 cut(s) 158
Eco130I CCWWGG 1 cut(s) 603
Eco24I GRGCYC 2 cut(s) 160, 344
Eco31I GGTCTC 1 cut(s) 544
Eco53kI GAGCTC 1 cut(s) 158
Eco88I CYCGRG 2 cut(s) 309, 409
EcoICRI GAGCTC 1 cut(s) 158
EcoRII CCWGG 2 cut(s) 283, 932
EcoT14I CCWWGG 1 cut(s) 603
EcoT38I GRGCYC 2 cut(s) 160, 344
ErhI CCWWGG 1 cut(s) 603
FaeI CATG 3 cut(s) 445, 607, 956
FaqI GGGAC 2 cut(s) 313, 351
FatI CATG 3 cut(s) 441, 603, 952
FblI GTMKAC 1 cut(s) 23
FokI GGATG 3 cut(s) 23, 282, 356
FriOI GRGCYC 2 cut(s) 160, 344
FspBI CTAG 1 cut(s) 669
GlaI GCGC 1 cut(s) 846
GsaI CCCAGC 1 cut(s) 300
HaeIII GGCC 1 cut(s) 608
HapII CCGG 2 cut(s) 536, 701
HgaI GACGC 1 cut(s) 618
HhaI GCGC 1 cut(s) 847
Hin1I GRCGYC 1 cut(s) 629
Hin1II CATG 3 cut(s) 445, 607, 956
Hin6I GCGC 1 cut(s) 845
HinP1I GCGC 1 cut(s) 845
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HindIII AAGCTT 1 cut(s) 763
HinfI GANTC 6 cut(s) 412, 507, 584, 725, 731, 746
HpaII CCGG 2 cut(s) 536, 701
HphI GGTGA 3 cut(s) 176, 299, 437
Hpy166II GTNNAC 2 cut(s) 24, 428
Hpy188I TCNGA 8 cut(s) 10, 102, 470, 506, 675, 730, 771, 901
Hpy188III TCNNGA 3 cut(s) 309, 409, 974
Hpy8I GTNNAC 2 cut(s) 24, 428
Hpy99I CGWCG 2 cut(s) 25, 79
HpyAV CCTTC 7 cut(s) 426, 495, 507, 835, 886, 932, 991
HpyCH4III ACNGT 3 cut(s) 518, 570, 742
HpyCH4IV ACGT 1 cut(s) 20
HpyCH4V TGCA 4 cut(s) 38, 273, 662, 779
HpyF3I CTNAG 7 cut(s) 152, 467, 503, 555, 594, 849, 900
HpySE526I ACGT 1 cut(s) 20
Hsp92I GRCGYC 1 cut(s) 629
Hsp92II CATG 3 cut(s) 445, 607, 956
HspAI GCGC 1 cut(s) 845
Kzo9I GATC 1 cut(s) 970
LguI GCTCTTC 1 cut(s) 115
LmnI GCTCC 1 cut(s) 14
Lsp1109I GCAGC 8 cut(s) 22, 28, 44, 50, 65, 68, 118, 859
LweI GCATC 1 cut(s) 260
MabI ACCWGGT 1 cut(s) 283
MaeI CTAG 1 cut(s) 669
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 2 cut(s) 313, 526
MalI GATC 1 cut(s) 972
MboI GATC 1 cut(s) 970
MflI RGATCY 1 cut(s) 970
MhlI GDGCHC 2 cut(s) 160, 344
MlsI TGGCCA 1 cut(s) 608
MluCI AATT 3 cut(s) 172, 637, 908
MluNI TGGCCA 1 cut(s) 608
MlyI GAGTC 3 cut(s) 421, 725, 734
MmeI TCCRAC 1 cut(s) 698
Mox20I TGGCCA 1 cut(s) 608
MscI TGGCCA 1 cut(s) 608
MseI TTAA 4 cut(s) 207, 636, 906, 927
Msp20I TGGCCA 1 cut(s) 608
MspA1I CMGCKG 3 cut(s) 35, 41, 59
MspI CCGG 2 cut(s) 536, 701
MspR9I CCNGG 3 cut(s) 285, 701, 934
Mva1269I GAATGC 1 cut(s) 480
MvaI CCWGG 2 cut(s) 285, 934
MvnI CGCG 1 cut(s) 423
NciI CCSGG 1 cut(s) 701
NcoI CCATGG 1 cut(s) 603
NdeII GATC 1 cut(s) 970
NlaIII CATG 3 cut(s) 445, 607, 956
NlaIV GGNNCC 1 cut(s) 810
NspI RCATGY 1 cut(s) 445
PaeR7I CTCGAG 1 cut(s) 309
PaqCI CACCTGC 1 cut(s) 673
PasI CCCWGGG 1 cut(s) 933
PciI ACATGT 1 cut(s) 441
PciSI GCTCTTC 1 cut(s) 115
PctI GAATGC 1 cut(s) 480
PfeI GAWTC 3 cut(s) 507, 584, 746
PinAI ACCGGT 1 cut(s) 535
PleI GAGTC 3 cut(s) 420, 725, 733
PpsI GAGTC 3 cut(s) 420, 725, 733
PscI ACATGT 1 cut(s) 441
PsiI TTATAA 1 cut(s) 171
Psp124BI GAGCTC 1 cut(s) 160
Psp6I CCWGG 2 cut(s) 283, 932
PspFI CCCAGC 1 cut(s) 296
PspGI CCWGG 2 cut(s) 283, 932
PspN4I GGNNCC 1 cut(s) 810
PstI CTGCAG 1 cut(s) 40
PstNI CAGNNNCTG 1 cut(s) 35
PsuI RGATCY 1 cut(s) 970
PvuII CAGCTG 2 cut(s) 35, 41
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
SacI GAGCTC 1 cut(s) 160
SalI GTCGAC 1 cut(s) 22
SapI GCTCTTC 1 cut(s) 115
SaqAI TTAA 4 cut(s) 207, 636, 906, 927
Sau3AI GATC 1 cut(s) 970
SchI GAGTC 3 cut(s) 421, 725, 734
ScrFI CCNGG 3 cut(s) 285, 701, 934
SduI GDGCHC 2 cut(s) 160, 344
SexAI ACCWGGT 1 cut(s) 283
SfaNI GCATC 1 cut(s) 260
SfcI CTRYAG 2 cut(s) 36, 126
Sfr274I CTCGAG 1 cut(s) 309
SlaI CTCGAG 1 cut(s) 309
SmlI CTYRAG 3 cut(s) 159, 309, 974
SmoI CTYRAG 3 cut(s) 159, 309, 974
Sse9I AATT 3 cut(s) 172, 637, 908
SsiI CCGC 6 cut(s) 44, 47, 50, 59, 423, 653
SspMI CTAG 1 cut(s) 669
SstI GAGCTC 1 cut(s) 160
StyD4I CCNGG 3 cut(s) 283, 699, 932
StyI CCWWGG 1 cut(s) 603
TaaI ACNGT 3 cut(s) 518, 570, 742
TaiI ACGT 1 cut(s) 23
TaqI TCGA 2 cut(s) 23, 310
TasI AATT 3 cut(s) 172, 637, 908
TauI GCSGC 4 cut(s) 47, 50, 53, 62
TfiI GAWTC 3 cut(s) 507, 584, 746
Tru1I TTAA 4 cut(s) 207, 636, 906, 927
Tru9I TTAA 4 cut(s) 207, 636, 906, 927
TscAI CASTG 2 cut(s) 151, 745
TseI GCWGC 8 cut(s) 32, 35, 38, 41, 53, 56, 131, 872
TspDTI ATGAA 6 cut(s) 213, 294, 315, 339, 390, 683
TspGWI ACGGA 1 cut(s) 130
TspRI CASTG 2 cut(s) 151, 745
XapI RAATTY 1 cut(s) 908
XceI RCATGY 1 cut(s) 445
XhoI CTCGAG 1 cut(s) 309
XmiI GTMKAC 1 cut(s) 23
XspI CTAG 1 cut(s) 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.