AT3G50750

BES1 BZR1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0005623
Physical Location & Seq
Reverse (-)
18861749 .. 18863397
1649 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G50750.1

Sequence Viewer

Length: 831 bp
ATGACGGCATCAGGAGGAGGATCAACGGCGGCGACGGGGAGGATGCCGACGTGGAAGGAAAGAGAGAACAACAAGAAGAGAGAAAGAAGAAGAAGAGCAATAGCAGCTAAAATCTTCACCGGACTTAGATCTCAAGGCAATTATAAACTTCCTAAACACTGTGACAACAATGAAGTCCTCAAAGCTCTTTGTCTTGAAGCTGGTTGGATCGTTCATGAAGATGGCACCACTTATCGAAAGGGTTCTCGACCAACAGAAACAACAGTGCCGTGTTCGTCAATCCAACTTAGTCCACAATCATCGGCCTTTCAAAGCCCAATTCCTTCGTATCAAGCTAGCCCTTCATCGTCATCTTACCCAAGTCCGACCCGGTTTGACCCGAATCAATCCTCGACTTATCTCATTCCCTATCTCCAAAACCTAGCTTCGTCTGGAAACCTCGCTCCTCTACGAATTTCCAATAGTGCCCCTGTTACACCGCCGATTTCTTCACCTAGAAGATCAAATCCGAGACTTCCGAGATGGCAAAGCAGTAATTTCCCAGTCTCAGCTCCGTCAAGCCCAACACGGCGTCTCCATCACTACACATCGATTCCAGAATGCGATGAATCGGATGTTTCGACGGTTGATTCTTGTCGATGGGGAAATTTCCAATCGGTTAACGTTTCTCAGACATGTCCTCCGTCGCCGACATTTAACCTGGTCGGAAAAAGCGTTAGCTCCGTCGGAGTAGATGTGTCGGTGAAGCCGTGGGAAGGTGAGAAGATTCACGATGTTGGTATCGATGACTTGGAGCTGACGCTAGGTCACAACACCAAAGGACGCGGCTAG

Protein Analysis

276

Amino Acids

30.11

Weight (kDa)

9.48

Isoelectric Point (pI)

76.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BES1_N PF05687 12 - 141 1.5e-59 BES1/BZR1 plant transcription factor, N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 144
AccB1I GGYRCC 1 cut(s) 224
AccII CGCG 1 cut(s) 825
AciI CCGC 3 cut(s) 29, 479, 825
AclI AACGTT 1 cut(s) 663
AclWI GGATC 2 cut(s) 28, 215
AcsI RAATTY 2 cut(s) 453, 646
AcyI GRCGYC 1 cut(s) 571
AfiI CCNNNNNNNGG 1 cut(s) 755
AflIII ACRYGT 1 cut(s) 674
AgsI TTSAA 2 cut(s) 197, 311
AhdI GACNNNNNGTC 1 cut(s) 804
AjiI CACGTC 1 cut(s) 51
AjnI CCWGG 1 cut(s) 699
AluBI AGCT 8 cut(s) 107, 185, 200, 335, 425, 551, 720, 796
AluI AGCT 8 cut(s) 107, 185, 200, 335, 425, 551, 720, 796
Alw26I GTCTC 3 cut(s) 505, 550, 578
AlwI GGATC 2 cut(s) 28, 215
AoxI GGCC 1 cut(s) 303
ApeKI GCWGC 1 cut(s) 104
ApoI RAATTY 2 cut(s) 453, 646
Asp700I GAANNNNTTC 1 cut(s) 241
AsuC2I CCSGG 1 cut(s) 370
AsuHPI GGTGA 4 cut(s) 109, 483, 754, 770
AsuNHI GCTAGC 1 cut(s) 335
BaeGI GKGCMC 1 cut(s) 469
BanI GGYRCC 1 cut(s) 224
BbvI GCAGC 1 cut(s) 116
BccI CCATC 4 cut(s) 215, 516, 585, 633
BceAI ACGGC 5 cut(s) 21, 42, 253, 584, 733
BciT130I CCWGG 1 cut(s) 701
BcnI CCSGG 1 cut(s) 370
BcoDI GTCTC 3 cut(s) 505, 550, 578
BfaI CTAG 5 cut(s) 336, 422, 495, 803, 829
BglII AGATCT 1 cut(s) 128
BisI GCNGC 3 cut(s) 30, 105, 826
BlsI GCNGC 3 cut(s) 31, 106, 827
Bme1390I CCNGG 2 cut(s) 370, 701
BmeRI GACNNNNNGTC 1 cut(s) 804
BmgBI CACGTC 1 cut(s) 51
BmiI GGNNCC 1 cut(s) 226
BmrFI CCNGG 2 cut(s) 370, 701
BmrI ACTGGG 1 cut(s) 536
BmsI GCATC 2 cut(s) 17, 33
BmtI GCTAGC 1 cut(s) 339
BmuI ACTGGG 1 cut(s) 536
BpuEI CTTGAG 1 cut(s) 117
BpuMI CCSGG 1 cut(s) 370
Bsa29I ATCGAT 2 cut(s) 590, 783
BsaHI GRCGYC 1 cut(s) 571
BsaJI CCNNGG 1 cut(s) 749
BsaWI WCCGGW 1 cut(s) 119
BsaXI ACNNNNNCTCC 6 cut(s) 558, 588, 664, 694, 720, 750
Bsc4I CCNNNNNNNGG 1 cut(s) 755
Bse1I ACTGG 1 cut(s) 542
BseBI CCWGG 1 cut(s) 701
BseCI ATCGAT 2 cut(s) 590, 783
BseDI CCNNGG 1 cut(s) 749
BseGI GGATG 2 cut(s) 48, 619
BseLI CCNNNNNNNGG 1 cut(s) 755
BseMII CTCAG 2 cut(s) 561, 683
BseNI ACTGG 1 cut(s) 542
BseRI GAGGAG 2 cut(s) 30, 435
BseSI GKGCMC 1 cut(s) 469
BseXI GCAGC 1 cut(s) 116
Bsh1236I CGCG 1 cut(s) 825
BshFI GGCC 1 cut(s) 305
BshNI GGYRCC 1 cut(s) 224
BshVI ATCGAT 2 cut(s) 590, 783
BsiSI CCGG 2 cut(s) 120, 370
BslI CCNNNNNNNGG 1 cut(s) 755
BsmAI GTCTC 3 cut(s) 505, 550, 578
BsmBI CGTCTC 1 cut(s) 578
BsmI GAATGC 1 cut(s) 605
BsnI GGCC 1 cut(s) 305
Bsp1286I GDGCHC 1 cut(s) 469
Bsp143I GATC 4 cut(s) 20, 128, 207, 500
BspACI CCGC 3 cut(s) 29, 479, 825
BspANI GGCC 1 cut(s) 305
BspCNI CTCAG 2 cut(s) 560, 682
BspDI ATCGAT 2 cut(s) 590, 783
BspFNI CGCG 1 cut(s) 825
BspHI TCATGA 1 cut(s) 214
BspLI GGNNCC 1 cut(s) 226
BspOI GCTAGC 1 cut(s) 339
BspPI GGATC 2 cut(s) 28, 215
BspQI GCTCTTC 1 cut(s) 88
BspT107I GGYRCC 1 cut(s) 224
BsrI ACTGG 1 cut(s) 542
BssECI CCNNGG 1 cut(s) 749
BssMI GATC 4 cut(s) 20, 128, 207, 500
BssNI GRCGYC 1 cut(s) 571
Bst2UI CCWGG 1 cut(s) 701
Bst4CI ACNGT 3 cut(s) 161, 265, 625
Bst6I CTCTTC 2 cut(s) 71, 88
BstACI GRCGYC 1 cut(s) 571
BstC8I GCNNGC 1 cut(s) 337
BstDEI CTNAG 4 cut(s) 125, 287, 547, 669
BstDSI CCRYGG 1 cut(s) 749
BstF5I GGATG 2 cut(s) 48, 619
BstFNI CGCG 1 cut(s) 825
BstKTI GATC 4 cut(s) 23, 131, 210, 503
BstMAI GTCTC 3 cut(s) 505, 550, 578
BstMBI GATC 4 cut(s) 20, 128, 207, 500
BstMWI GCNNNNNNNGC 1 cut(s) 104
BstNI CCWGG 1 cut(s) 701
BstNSI RCATGY 1 cut(s) 678
BstSCI CCNGG 2 cut(s) 368, 699
BstSLI GKGCMC 1 cut(s) 469
BstUI CGCG 1 cut(s) 825
BstV1I GCAGC 1 cut(s) 116
BstX2I RGATCY 1 cut(s) 128
BstYI RGATCY 1 cut(s) 128
Bsu15I ATCGAT 2 cut(s) 590, 783
BsuRI GGCC 1 cut(s) 305
BsuTUI ATCGAT 2 cut(s) 590, 783
BtgI CCRYGG 1 cut(s) 749
BtgZI GCGATG 1 cut(s) 618
BtrI CACGTC 1 cut(s) 51
BtsCI GGATG 2 cut(s) 48, 619
BtsIMutI CAGTG 2 cut(s) 157, 270
Cac8I GCNNGC 1 cut(s) 337
CciI TCATGA 1 cut(s) 214
ClaI ATCGAT 2 cut(s) 590, 783
CseI GACGC 2 cut(s) 560, 808
CsiI ACCWGGT 1 cut(s) 699
CviAII CATG 2 cut(s) 215, 675
DdeI CTNAG 4 cut(s) 125, 287, 547, 669
DpnI GATC 4 cut(s) 22, 130, 209, 502
DpnII GATC 4 cut(s) 20, 128, 207, 500
DriI GACNNNNNGTC 1 cut(s) 804
Eam1104I CTCTTC 2 cut(s) 71, 88
Eam1105I GACNNNNNGTC 1 cut(s) 804
EarI CTCTTC 2 cut(s) 71, 88
EcoRII CCWGG 1 cut(s) 699
Esp3I CGTCTC 1 cut(s) 578
FaeI CATG 2 cut(s) 218, 678
FaiI YATR 3 cut(s) 144, 216, 676
FatI CATG 2 cut(s) 214, 674
Fnu4HI GCNGC 3 cut(s) 30, 105, 826
FokI GGATG 2 cut(s) 55, 626
Fsp4HI GCNGC 3 cut(s) 30, 105, 826
FspBI CTAG 5 cut(s) 336, 422, 495, 803, 829
GluI GCNGC 3 cut(s) 30, 105, 826
HaeIII GGCC 1 cut(s) 305
HapII CCGG 2 cut(s) 120, 370
HgaI GACGC 2 cut(s) 560, 808
Hin1I GRCGYC 1 cut(s) 571
Hin1II CATG 2 cut(s) 218, 678
HincII GTYRAC 1 cut(s) 661
HindII GTYRAC 1 cut(s) 661
HinfI GANTC 5 cut(s) 382, 592, 608, 629, 766
HpaI GTTAAC 1 cut(s) 661
HpaII CCGG 2 cut(s) 120, 370
HphI GGTGA 4 cut(s) 109, 483, 754, 770
Hpy166II GTNNAC 2 cut(s) 293, 661
Hpy188I TCNGA 7 cut(s) 366, 510, 519, 613, 672, 707, 728
Hpy188III TCNNGA 7 cut(s) 12, 194, 215, 246, 432, 596, 770
Hpy8I GTNNAC 2 cut(s) 293, 661
Hpy99I CGWCG 5 cut(s) 37, 52, 625, 688, 728
HpyAV CCTTC 4 cut(s) 49, 333, 351, 749
HpyCH4III ACNGT 3 cut(s) 161, 265, 625
HpyCH4IV ACGT 2 cut(s) 50, 663
HpyF10VI GCNNNNNNNGC 1 cut(s) 104
HpyF3I CTNAG 4 cut(s) 125, 287, 547, 669
HpySE526I ACGT 2 cut(s) 50, 663
Hsp92I GRCGYC 1 cut(s) 571
Hsp92II CATG 2 cut(s) 218, 678
KspAI GTTAAC 1 cut(s) 661
Kzo9I GATC 4 cut(s) 20, 128, 207, 500
LguI GCTCTTC 1 cut(s) 88
LmnI GCTCC 4 cut(s) 448, 556, 725, 793
LpnPI CCDG 9 cut(s) 133, 186, 383, 417, 483, 555, 609, 686, 713
Lsp1109I GCAGC 1 cut(s) 116
LweI GCATC 2 cut(s) 17, 33
MabI ACCWGGT 1 cut(s) 699
MaeI CTAG 5 cut(s) 336, 422, 495, 803, 829
MaeII ACGT 2 cut(s) 50, 663
MaeIII GTNAC 3 cut(s) 161, 472, 806
MalI GATC 4 cut(s) 22, 130, 209, 502
MboI GATC 4 cut(s) 20, 128, 207, 500
MboII GAAGA 9 cut(s) 88, 99, 102, 105, 106, 230, 480, 510, 775
MflI RGATCY 1 cut(s) 128
MhlI GDGCHC 1 cut(s) 469
MluCI AATT 5 cut(s) 139, 318, 453, 535, 646
MmeI TCCRAC 5 cut(s) 185, 307, 389, 685, 706
MnlI CCTC 8 cut(s) 8, 11, 33, 188, 400, 449, 456, 690
MroXI GAANNNNTTC 1 cut(s) 241
MseI TTAA 2 cut(s) 660, 696
MslI CAYNNNNRTG 1 cut(s) 219
MspI CCGG 2 cut(s) 120, 370
MspR9I CCNGG 2 cut(s) 370, 701
Mva1269I GAATGC 1 cut(s) 605
MvaI CCWGG 1 cut(s) 701
MvnI CGCG 1 cut(s) 825
MwoI GCNNNNNNNGC 1 cut(s) 104
NciI CCSGG 1 cut(s) 370
NdeII GATC 4 cut(s) 20, 128, 207, 500
NheI GCTAGC 1 cut(s) 335
NlaIII CATG 2 cut(s) 218, 678
NlaIV GGNNCC 1 cut(s) 226
NmuCI GTSAC 2 cut(s) 161, 806
NspI RCATGY 1 cut(s) 678
PagI TCATGA 1 cut(s) 214
PciI ACATGT 1 cut(s) 674
PciSI GCTCTTC 1 cut(s) 88
PcsI WCGNNNNNNNCGW 3 cut(s) 617, 711, 746
PctI GAATGC 1 cut(s) 605
PdmI GAANNNNTTC 1 cut(s) 241
PfeI GAWTC 5 cut(s) 382, 592, 608, 629, 766
PkrI GCNGC 3 cut(s) 31, 106, 827
PscI ACATGT 1 cut(s) 674
PsiI TTATAA 1 cut(s) 144
Psp1406I AACGTT 1 cut(s) 663
Psp6I CCWGG 1 cut(s) 699
PspGI CCWGG 1 cut(s) 699
PspN4I GGNNCC 1 cut(s) 226
PsuI RGATCY 1 cut(s) 128
RseI CAYNNNNRTG 1 cut(s) 219
SapI GCTCTTC 1 cut(s) 88
SaqAI TTAA 2 cut(s) 660, 696
SatI GCNGC 3 cut(s) 30, 105, 826
Sau3AI GATC 4 cut(s) 20, 128, 207, 500
ScrFI CCNGG 2 cut(s) 370, 701
SduI GDGCHC 1 cut(s) 469
SexAI ACCWGGT 1 cut(s) 699
SfaNI GCATC 2 cut(s) 17, 33
SmiMI CAYNNNNRTG 1 cut(s) 219
SmlI CTYRAG 1 cut(s) 132
SmoI CTYRAG 1 cut(s) 132
Sse9I AATT 5 cut(s) 139, 318, 453, 535, 646
SsiI CCGC 3 cut(s) 29, 479, 825
SspMI CTAG 5 cut(s) 336, 422, 495, 803, 829
StyD4I CCNGG 2 cut(s) 368, 699
TaaI ACNGT 3 cut(s) 161, 265, 625
TaiI ACGT 2 cut(s) 53, 666
TaqI TCGA 7 cut(s) 235, 247, 392, 590, 620, 637, 783
TasI AATT 5 cut(s) 139, 318, 453, 535, 646
TauI GCSGC 2 cut(s) 32, 828
TfiI GAWTC 5 cut(s) 382, 592, 608, 629, 766
Tru1I TTAA 2 cut(s) 660, 696
Tru9I TTAA 2 cut(s) 660, 696
TscAI CASTG 2 cut(s) 164, 270
TseFI GTSAC 2 cut(s) 161, 806
TseI GCWGC 1 cut(s) 104
Tsp45I GTSAC 2 cut(s) 161, 806
TspDTI ATGAA 5 cut(s) 186, 203, 231, 333, 621
TspGWI ACGGA 3 cut(s) 543, 672, 712
TspRI CASTG 2 cut(s) 164, 270
XapI RAATTY 2 cut(s) 453, 646
XceI RCATGY 1 cut(s) 678
XmnI GAANNNNTTC 1 cut(s) 241
XspI CTAG 5 cut(s) 336, 422, 495, 803, 829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.