Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005623

Physical Location & Seq

Genomic Coordinates Reverse (-)

34411146 .. 34412907

Gene Structure 1762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G382900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 885 bp

ATGACGTCGGATGGAGCCACGTCTGCGGCGACGGTGGCGCGAAGGAAACCGTCGTGGAGGGAGAGAGAGAACAACCGGAGGAGAGAGAGGAGGAGGAGAGCCATAGCTGCGAAGATATTCGCAGGGCTCCGAGCTCAGGGCAACTTCAATTTGCCCAAGCACTGCGACAACAACGAGGTGTTGAAAGCTCTCTGCCTCCAGGCTGGCTGGACCGTCGAAGACGACGGCACCACCTATCGCAAGGGATTGAGGCCGACCCAAATTGATACACCAGGCACATCAACCATGATCAGCCCTTACTCTTCTCTAAATCCTAGTCCAATCCCATCCTACCAAGCCAGTCCTTCGTCGTCTTCCTATCCAAGCCCAAGTCGTTTCGATCCCAGCACGAATTCATCCAATCCCAGTCGCTATCTGCGCTCTGCAATTCCTTCGTCTCTCCCTCCTCTGCGAATTTCCAATAGTGCCCCTGTAACCCCACCGCTCTCATCCCCAACCTCCAGAAACCCCAACCCAATTCCAAACTGGGACTCCATTGCTAAACAGTCCATGGCCTCTTTCGATTACCCGTTTTATGCTGTCTCTGCTCCGGCTAGCCCGACCCGTCACCAGCTCCATTTTCCAGCTGCTACCATTCCCGAATGTGACGAGTCTGATACTTCCACTGTTGATTCTGGGCAATGGGTTTGCTTCCAGAGATTTGCTCCTTCTCTGTCAGCAATGCCAGCCTCTCCCACTTTCAATCTTGTGAAGCCTGTTGTTGCTCACCAAAACTTGCCTGACAGTGAGATCCCAGAGGTAAAGCCGTGGATTGGAGAGAAGATTCATGAGGTGGGATTGGATGATTTGGAGCTCACACTTGGAAGTGGTAAGCCTCGAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035670 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048523 GO:0048532 GO:0048545 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1904961 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

BES1_N

Protein Analysis

295

Amino Acids

32.13

Weight (kDa)

9.23

Isoelectric Point (pI)

70.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005623)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19350 AT1G19350 AT1G19350 AT1G19350 AT1G19350 AT1G75080 AT1G75080 AT3G50750
fragaria_vesca	FvH4_2g40170 FvH4_2g40170
malus_domestica	MD08G1035400.v1.1 MD15G1031900.v1.1
prunus_persica	Prupe.1G382900_v2.0.a1
pyrus_communis	pycom15g02760
rosa_chinensis	RchiOBHm_Chr6g0300561
rosa_laevigata	RLG00000011324 RLG00000028760
rosa_multiflora	Rmu_sc0000718.1_g000032 Rmu_sc0002792.1_g000011 Rmu_sc0021182.1_g000002
rosa_roxburghii	Rroxscaffold_7G00167670
rosa_rugosa	Rorug06G0297200
rosa_samantha	Rh3CG341300 Rh6AG409700 Rh6BG417000 Rh6CG424700 Rh6DG410200
rosa_wichuraiana	Rw6G035850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	8
AccB1I	GGYRCC	1 cut(s)	227
AccBSI	CCGCTC	1 cut(s)	484
AccII	CGCG	1 cut(s)	40
AciI	CCGC	2 cut(s)	26, 482
AclWI	GGATC	2 cut(s)	374, 784
AcsI	RAATTY	2 cut(s)	391, 453
AcyI	GRCGYC	1 cut(s)	5
AfiI	CCNNNNNNNGG	2 cut(s)	136, 812
AgsI	TTSAA	3 cut(s)	148, 184, 742
AjiI	CACGTC	1 cut(s)	21
AjnI	CCWGG	2 cut(s)	198, 271
AluBI	AGCT	6 cut(s)	107, 134, 188, 613, 626, 853
AluI	AGCT	6 cut(s)	107, 134, 188, 613, 626, 853
Alw21I	GWGCWC	2 cut(s)	136, 855
Alw26I	GTCTC	2 cut(s)	441, 586
AlwI	GGATC	2 cut(s)	374, 784
AoxI	GGCC	2 cut(s)	251, 552
ApeKI	GCWGC	2 cut(s)	107, 626
ApoI	RAATTY	2 cut(s)	391, 453
Asp700I	GAANNNNTTC	1 cut(s)	116
AspLEI	GCGC	2 cut(s)	40, 420
AspS9I	GGNCC	1 cut(s)	210
AsuHPI	GGTGA	2 cut(s)	599, 758
AsuNHI	GCTAGC	1 cut(s)	593
AvaII	GGWCC	1 cut(s)	210
BaeGI	GKGCMC	1 cut(s)	469
BanI	GGYRCC	1 cut(s)	227
BanII	GRGCYC	3 cut(s)	129, 136, 855
BbsI	GAAGAC	2 cut(s)	225, 345
Bbv12I	GWGCWC	2 cut(s)	136, 855
BbvI	GCAGC	2 cut(s)	94, 613
BccI	CCATC	2 cut(s)	5, 334
BceAI	ACGGC	2 cut(s)	241, 790
BcgI	CGANNNNNNTGC	2 cut(s)	414, 448
BciT130I	CCWGG	2 cut(s)	200, 273
BclI	TGATCA	1 cut(s)	288
BcoDI	GTCTC	2 cut(s)	441, 586
BfaI	CTAG	2 cut(s)	315, 594
BisI	GCNGC	3 cut(s)	27, 108, 627
BlsI	GCNGC	3 cut(s)	28, 109, 628
Bme1390I	CCNGG	2 cut(s)	200, 273
Bme18I	GGWCC	1 cut(s)	210
BmgBI	CACGTC	1 cut(s)	21
BmgT120I	GGNCC	1 cut(s)	210
BmiI	GGNNCC	3 cut(s)	16, 128, 229
BmrFI	CCNGG	2 cut(s)	200, 273
BmrI	ACTGGG	2 cut(s)	399, 535
BmtI	GCTAGC	1 cut(s)	597
BmuI	ACTGGG	2 cut(s)	399, 535
BpiI	GAAGAC	2 cut(s)	225, 345
BplI	GAGNNNNNCTC	2 cut(s)	688, 720
BpmI	CTGGAG	2 cut(s)	182, 484
Bpu10I	CCTNAGC	1 cut(s)	135
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	2 cut(s)	549, 806
BsaWI	WCCGGW	1 cut(s)	75
BsaXI	ACNNNNNCTCC	2 cut(s)	515, 545
Bsc4I	CCNNNNNNNGG	2 cut(s)	136, 812
Bse1I	ACTGG	3 cut(s)	339, 405, 530
Bse3DI	GCAATG	3 cut(s)	534, 686, 726
BseBI	CCWGG	2 cut(s)	200, 273
BseDI	CCNNGG	2 cut(s)	549, 806
BseGI	GGATG	5 cut(s)	16, 326, 395, 488, 847
BseLI	CCNNNNNNNGG	2 cut(s)	136, 812
BseMI	GCAATG	3 cut(s)	534, 686, 726
BseMII	CTCAG	1 cut(s)	149
BseNI	ACTGG	3 cut(s)	339, 405, 530
BseRI	GAGGAG	5 cut(s)	94, 103, 106, 109, 435
BseSI	GKGCMC	1 cut(s)	469
BseXI	GCAGC	2 cut(s)	94, 613
BseYI	CCCAGC	1 cut(s)	383
Bsh1236I	CGCG	1 cut(s)	40
BshFI	GGCC	2 cut(s)	253, 554
BshNI	GGYRCC	1 cut(s)	227
BsiHKAI	GWGCWC	2 cut(s)	136, 855
BsiSI	CCGG	2 cut(s)	76, 590
BslFI	GGGAC	1 cut(s)	542
BslI	CCNNNNNNNGG	2 cut(s)	136, 812
BsmAI	GTCTC	2 cut(s)	441, 586
BsmBI	CGTCTC	1 cut(s)	441
BsmFI	GGGAC	1 cut(s)	542
BsnI	GGCC	2 cut(s)	253, 554
Bsp1286I	GDGCHC	4 cut(s)	129, 136, 469, 855
Bsp143I	GATC	3 cut(s)	288, 379, 789
Bsp19I	CCATGG	1 cut(s)	549
BspACI	CCGC	2 cut(s)	26, 482
BspANI	GGCC	2 cut(s)	253, 554
BspCNI	CTCAG	1 cut(s)	148
BspFNI	CGCG	1 cut(s)	40
BspHI	TCATGA	1 cut(s)	826
BspLI	GGNNCC	3 cut(s)	16, 128, 229
BspOI	GCTAGC	1 cut(s)	597
BspPI	GGATC	2 cut(s)	374, 784
BspT107I	GGYRCC	1 cut(s)	227
BsrBI	CCGCTC	1 cut(s)	484
BsrDI	GCAATG	3 cut(s)	534, 686, 726
BsrI	ACTGG	3 cut(s)	339, 405, 530
BssECI	CCNNGG	2 cut(s)	549, 806
BssMI	GATC	3 cut(s)	288, 379, 789
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	549
Bst2UI	CCWGG	2 cut(s)	200, 273
Bst4CI	ACNGT	6 cut(s)	34, 51, 214, 546, 667, 785
Bst6I	CTCTTC	1 cut(s)	307
BstACI	GRCGYC	1 cut(s)	5
BstC8I	GCNNGC	3 cut(s)	205, 595, 726
BstDEI	CTNAG	1 cut(s)	135
BstDSI	CCRYGG	2 cut(s)	549, 806
BstF5I	GGATG	5 cut(s)	16, 326, 395, 488, 847
BstFNI	CGCG	1 cut(s)	40
BstHHI	GCGC	2 cut(s)	40, 420
BstKTI	GATC	3 cut(s)	291, 382, 792
BstMAI	GTCTC	2 cut(s)	441, 586
BstMBI	GATC	3 cut(s)	288, 379, 789
BstMWI	GCNNNNNNNGC	6 cut(s)	23, 35, 107, 417, 584, 725
BstNI	CCWGG	2 cut(s)	200, 273
BstSCI	CCNGG	2 cut(s)	198, 271
BstSLI	GKGCMC	1 cut(s)	469
BstUI	CGCG	1 cut(s)	40
BstV1I	GCAGC	2 cut(s)	94, 613
BstV2I	GAAGAC	2 cut(s)	225, 345
BstX2I	RGATCY	1 cut(s)	789
BstYI	RGATCY	1 cut(s)	789
BsuRI	GGCC	2 cut(s)	253, 554
BtgI	CCRYGG	2 cut(s)	549, 806
BtrI	CACGTC	1 cut(s)	21
BtsCI	GGATG	5 cut(s)	16, 326, 395, 488, 847
BtsI	GCAGTG	1 cut(s)	160
BtsIMutI	CAGTG	3 cut(s)	160, 663, 790
Cac8I	GCNNGC	3 cut(s)	205, 595, 726
CciI	TCATGA	1 cut(s)	826
CfoI	GCGC	2 cut(s)	40, 420
Cfr13I	GGNCC	1 cut(s)	210
CviAII	CATG	3 cut(s)	286, 550, 827
DdeI	CTNAG	1 cut(s)	135
DpnI	GATC	3 cut(s)	290, 381, 791
DpnII	GATC	3 cut(s)	288, 379, 789
Eam1104I	CTCTTC	1 cut(s)	307
EarI	CTCTTC	1 cut(s)	307
Ecl136II	GAGCTC	2 cut(s)	134, 853
Eco130I	CCWWGG	1 cut(s)	549
Eco24I	GRGCYC	3 cut(s)	129, 136, 855
Eco47I	GGWCC	1 cut(s)	210
Eco53kI	GAGCTC	2 cut(s)	134, 853
EcoICRI	GAGCTC	2 cut(s)	134, 853
EcoRI	GAATTC	1 cut(s)	391
EcoRII	CCWGG	2 cut(s)	198, 271
EcoT14I	CCWWGG	1 cut(s)	549
EcoT38I	GRGCYC	3 cut(s)	129, 136, 855
ErhI	CCWWGG	1 cut(s)	549
Esp3I	CGTCTC	1 cut(s)	441
FaeI	CATG	3 cut(s)	289, 553, 830
FaiI	YATR	5 cut(s)	104, 287, 551, 576, 828
FaqI	GGGAC	1 cut(s)	542
FatI	CATG	3 cut(s)	285, 549, 826
FbaI	TGATCA	1 cut(s)	288
Fnu4HI	GCNGC	3 cut(s)	27, 108, 627
FokI	GGATG	5 cut(s)	23, 313, 382, 475, 854
FriOI	GRGCYC	3 cut(s)	129, 136, 855
Fsp4HI	GCNGC	3 cut(s)	27, 108, 627
FspBI	CTAG	2 cut(s)	315, 594
GlaI	GCGC	2 cut(s)	39, 419
GluI	GCNGC	3 cut(s)	27, 108, 627
GsaI	CCCAGC	1 cut(s)	387
GsuI	CTGGAG	2 cut(s)	182, 484
HaeIII	GGCC	2 cut(s)	253, 554
HapII	CCGG	2 cut(s)	76, 590
HhaI	GCGC	2 cut(s)	40, 420
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	3 cut(s)	289, 553, 830
Hin6I	GCGC	2 cut(s)	38, 418
HinP1I	GCGC	2 cut(s)	38, 418
HinfI	GANTC	4 cut(s)	530, 650, 671, 823
HpaII	CCGG	2 cut(s)	76, 590
HphI	GGTGA	2 cut(s)	599, 758
Hpy188I	TCNGA	3 cut(s)	10, 131, 655
Hpy188III	TCNNGA	4 cut(s)	501, 638, 694, 827
Hpy99I	CGWCG	6 cut(s)	10, 34, 55, 218, 227, 352
HpyAV	CCTTC	4 cut(s)	36, 354, 441, 717
HpyCH4III	ACNGT	6 cut(s)	34, 51, 214, 546, 667, 785
HpyCH4IV	ACGT	2 cut(s)	5, 20
HpyCH4V	TGCA	1 cut(s)	425
HpyF10VI	GCNNNNNNNGC	6 cut(s)	23, 35, 107, 417, 584, 725
HpyF3I	CTNAG	1 cut(s)	135
HpySE526I	ACGT	2 cut(s)	5, 20
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	3 cut(s)	289, 553, 830
HspAI	GCGC	2 cut(s)	38, 418
Ksp22I	TGATCA	1 cut(s)	288
Kzo9I	GATC	3 cut(s)	288, 379, 789
LmnI	GCTCC	6 cut(s)	14, 132, 592, 618, 709, 850
Lsp1109I	GCAGC	2 cut(s)	94, 613
MaeI	CTAG	2 cut(s)	315, 594
MaeII	ACGT	2 cut(s)	5, 20
MaeIII	GTNAC	3 cut(s)	472, 605, 644
MalI	GATC	3 cut(s)	290, 381, 791
MbiI	CCGCTC	1 cut(s)	484
MboI	GATC	3 cut(s)	288, 379, 789
MboII	GAAGA	5 cut(s)	124, 230, 294, 345, 832
MflI	RGATCY	1 cut(s)	789
MhlI	GDGCHC	4 cut(s)	129, 136, 469, 855
MluCI	AATT	6 cut(s)	148, 261, 391, 426, 453, 516
MlyI	GAGTC	2 cut(s)	524, 659
MroXI	GAANNNNTTC	1 cut(s)	116
MseI	TTAA	1 cut(s)	883
MspA1I	CMGCKG	1 cut(s)	626
MspI	CCGG	2 cut(s)	76, 590
MspR9I	CCNGG	2 cut(s)	200, 273
MvaI	CCWGG	2 cut(s)	200, 273
MvnI	CGCG	1 cut(s)	40
MwoI	GCNNNNNNNGC	6 cut(s)	23, 35, 107, 417, 584, 725
NcoI	CCATGG	1 cut(s)	549
NdeII	GATC	3 cut(s)	288, 379, 789
NheI	GCTAGC	1 cut(s)	593
NlaIII	CATG	3 cut(s)	289, 553, 830
NlaIV	GGNNCC	3 cut(s)	16, 128, 229
NmuCI	GTSAC	2 cut(s)	605, 644
PagI	TCATGA	1 cut(s)	826
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PdmI	GAANNNNTTC	1 cut(s)	116
PfeI	GAWTC	2 cut(s)	671, 823
PkrI	GCNGC	3 cut(s)	28, 109, 628
PleI	GAGTC	2 cut(s)	524, 658
PpsI	GAGTC	2 cut(s)	524, 658
Psp124BI	GAGCTC	2 cut(s)	136, 855
Psp6I	CCWGG	2 cut(s)	198, 271
PspFI	CCCAGC	1 cut(s)	383
PspGI	CCWGG	2 cut(s)	198, 271
PspN4I	GGNNCC	3 cut(s)	16, 128, 229
PspPI	GGNCC	1 cut(s)	210
PsuI	RGATCY	1 cut(s)	789
PvuII	CAGCTG	1 cut(s)	626
SacI	GAGCTC	2 cut(s)	136, 855
SaqAI	TTAA	1 cut(s)	883
SatI	GCNGC	3 cut(s)	27, 108, 627
Sau3AI	GATC	3 cut(s)	288, 379, 789
Sau96I	GGNCC	1 cut(s)	210
SchI	GAGTC	2 cut(s)	524, 659
ScrFI	CCNGG	2 cut(s)	200, 273
SduI	GDGCHC	4 cut(s)	129, 136, 469, 855
SinI	GGWCC	1 cut(s)	210
Sse9I	AATT	6 cut(s)	148, 261, 391, 426, 453, 516
SsiI	CCGC	2 cut(s)	26, 482
SspMI	CTAG	2 cut(s)	315, 594
SstI	GAGCTC	2 cut(s)	136, 855
StyD4I	CCNGG	2 cut(s)	198, 271
StyI	CCWWGG	1 cut(s)	549
TaaI	ACNGT	6 cut(s)	34, 51, 214, 546, 667, 785
TaiI	ACGT	2 cut(s)	8, 23
TaqI	TCGA	4 cut(s)	216, 378, 561, 877
TasI	AATT	6 cut(s)	148, 261, 391, 426, 453, 516
TauI	GCSGC	1 cut(s)	29
TfiI	GAWTC	2 cut(s)	671, 823
Tru1I	TTAA	1 cut(s)	883
Tru9I	TTAA	1 cut(s)	883
TscAI	CASTG	3 cut(s)	167, 670, 790
TseFI	GTSAC	2 cut(s)	605, 644
TseI	GCWGC	2 cut(s)	107, 626
Tsp45I	GTSAC	2 cut(s)	605, 644
TspDTI	ATGAA	2 cut(s)	384, 815
TspRI	CASTG	3 cut(s)	167, 670, 790
VpaK11BI	GGWCC	1 cut(s)	210
XapI	RAATTY	2 cut(s)	391, 453
XcmI	CCANNNNNNNNNTGG	1 cut(s)	522
XmnI	GAANNNNTTC	1 cut(s)	116
XspI	CTAG	2 cut(s)	315, 594
ZraI	GACGTC	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.