AT1G79710

BT1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
29994962 .. 29997201
2240 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G79710.2

Sequence Viewer

Length: 1494 bp
ATGGCCAATCGATCGGAGGAAGCAGAGTACGAGAACGATTCTCGGCGAAATCATCAAGACAAGAAGAAAGAAGGAGTTTTAGATCTGGTACTGAAACGACCTTTACGGTGGCTAAGAATGCTCATCGAAGAGCTTCACTGGAGCTTCTTCTTCGGTGTGATTATCGTCTATGGAGTTAGCCAAGGACTTGGTAAAGGTCTCAGCAAAGTCAGCACACAGTACTACTTCAAAGACGAGCAGAAGATACAACCCTCTCAAGCTCAGATTTACGTTGGTTTGATTCAGATTCCTTGGATTATTAAACCTCTCTGGGGATTGTTGACTGATGTTGTCCCAGTTTTGGGTTACAGGAGACGACCCTATTTCATATTAGCCGGTTTTCTTGCTATGATCTCCATGATGGTGTTATGGCTTCACACGAATCTGCATCTTGCACTGGCTTTGTCCTGTCTTGTGGCAGGAAGTGCTGGAGTTGCTATAGCAGATGTAACTATTGATGCTTGTGTGACACAATGTAGCATAAGCCATCCTACACTTGCTGCAGATATGCAAAGTTTGTGTGGTTTGTGTTCTTCGATTGGTTCCTTGGTTGGTTTCTCCCTTAGCGGCGTTTTGGTGCACTTGGTTGGGTCCAAAGGTGTGTACGGTTTACTCGGTGTGACGGCAGGATTGCTTGTTGTGGTTGGGATGGTTCTGAAAGAATCTCCTTCTCGCAGTCTAGGTCGCAAGCATGTTAACGACAAGTTTCTGGATGCTGGAAGTGCAATATGGAAAACCTTTCAATATGGTGAGGTGTGGCGACCATGCTTGTTCATGCTATTGTCAGCTGCAGTGAGCTTGCACATTCACGAAGGCATGTTCTATTGGTACACGGATTCAAAGGATGGCCCTTCCTTTTCAAAGGAAGCCGTTGGATCCATTATGTCGTTTGGTGCAATTGGCTCTCTTGTGGGAATACTTCTCTATCAGAACTTTCTGAAGAACTTCCCTTTCAGGAATGTCGTCTTCTGGGCACTTTCCCTATCTGTCCTGTCAGGATTTCTGGATTTAATCCTGGTGCTGCGCATAAATCTGAAGCTTGGTCTCCCTGATTACTTCTTTATTGTGGTAGATGAGTTTGTTTCACATATGATAAGTAGAATCAAGTGGTTACCCTTACTTGTTCTCAGCTCCAAGCTCTGCCCTGCCGGTATGGAAGGCACTTTCTTTGCTTTGCTCATGTCTATTGAACATATAGGACATCTAGTGTCGTCATGGGGCGGAGGAGTACTACTCCATGCCCTGAAAGTTACGCGTACTCAGTTTGATAATCTCTGGTTGGTTATTGTGATCAGGAGTTTATTGAGGGTAATCCCAATTGGATTGGTCTTTTTGATACCAAATGTTGATTCAAACTCAACCATTCTCCCTGCTGAGATGTTAACAAGTAGAATAAGTGAAGGTGTTGATACCGAGAAGATAGAGATGACCGCTCTGATCAGTGATGAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

497

Amino Acids

55.03

Weight (kDa)

8.09

Isoelectric Point (pI)

37.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 61 - 469 7.3e-147 BT1 family
MFS_1 PF07690 183 - 416 4e-09 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1064
AccBSI CCGCTC 1 cut(s) 1472
AccII CGCG 1 cut(s) 1294
AciI CCGC 3 cut(s) 606, 1260, 1470
AclWI GGATC 2 cut(s) 909, 922
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 2 cut(s) 998, 1094
AfaI GTAC 7 cut(s) 29, 90, 221, 644, 869, 1269, 1297
AfiI CCNNNNNNNGG 3 cut(s) 311, 340, 341
AflIII ACRYGT 1 cut(s) 1292
AgsI TTSAA 6 cut(s) 229, 782, 879, 900, 1229, 1392
AjnI CCWGG 1 cut(s) 1053
AjuI GAANNNNNNNTTGG 2 cut(s) 1372, 1404
AluBI AGCT 9 cut(s) 133, 144, 260, 827, 837, 1078, 1170, 1177, 1490
AluI AGCT 9 cut(s) 133, 144, 260, 827, 837, 1078, 1170, 1177, 1490
Alw21I GWGCWC 1 cut(s) 621
Alw26I GTCTC 3 cut(s) 203, 346, 1088
Alw44I GTGCAC 1 cut(s) 617
AlwI GGATC 2 cut(s) 909, 922
AoxI GGCC 2 cut(s) 3, 886
ApaLI GTGCAC 1 cut(s) 617
ApeKI GCWGC 3 cut(s) 539, 827, 1060
Asp700I GAANNNNTTC 2 cut(s) 132, 983
AspLEI GCGC 1 cut(s) 1065
AspS9I GGNCC 2 cut(s) 630, 887
AsuHPI GGTGA 1 cut(s) 800
AvaII GGWCC 1 cut(s) 630
BaeGI GKGCMC 2 cut(s) 621, 1015
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 914
BbsI GAAGAC 1 cut(s) 997
Bbv12I GWGCWC 1 cut(s) 621
BbvI GCAGC 3 cut(s) 526, 814, 1047
BccI CCATC 4 cut(s) 394, 534, 682, 878
BceAI ACGGC 2 cut(s) 678, 893
BciT130I CCWGG 1 cut(s) 1055
BclI TGATCA 2 cut(s) 1329, 1476
BcoDI GTCTC 3 cut(s) 203, 346, 1088
BfaI CTAG 2 cut(s) 719, 1244
BfmI CTRYAG 3 cut(s) 477, 540, 828
BglII AGATCT 1 cut(s) 82
BisI GCNGC 4 cut(s) 540, 607, 828, 1061
BlsI GCNGC 4 cut(s) 541, 608, 829, 1062
BmcAI AGTACT 2 cut(s) 221, 1269
Bme1390I CCNGG 1 cut(s) 1055
Bme18I GGWCC 1 cut(s) 630
BmgT120I GGNCC 2 cut(s) 630, 887
BmiI GGNNCC 3 cut(s) 583, 631, 916
BmrFI CCNGG 1 cut(s) 1055
BmrI ACTGGG 1 cut(s) 329
BmsI GCATC 3 cut(s) 436, 487, 742
BmuI ACTGGG 1 cut(s) 329
BpiI GAAGAC 1 cut(s) 997
BplI GAGNNNNNCTC 2 cut(s) 1257, 1289
BpmI CTGGAG 2 cut(s) 160, 489
Bpu10I CCTNAGC 1 cut(s) 602
BpuEI CTTGAG 1 cut(s) 240
Bsa29I ATCGAT 1 cut(s) 10
BsaI GGTCTC 2 cut(s) 203, 1088
BsaJI CCNNGG 3 cut(s) 181, 290, 585
Bsc4I CCNNNNNNNGG 3 cut(s) 311, 340, 341
Bse118I RCCGGY 2 cut(s) 374, 1187
Bse1I ACTGG 3 cut(s) 143, 335, 441
BseBI CCWGG 1 cut(s) 1055
BseCI ATCGAT 1 cut(s) 10
BseDI CCNNGG 3 cut(s) 181, 290, 585
BseGI GGATG 4 cut(s) 526, 693, 757, 889
BseLI CCNNNNNNNGG 3 cut(s) 311, 340, 341
BseMII CTCAG 5 cut(s) 214, 275, 1180, 1313, 1404
BseNI ACTGG 3 cut(s) 143, 335, 441
BseRI GAGGAG 1 cut(s) 1278
BseSI GKGCMC 2 cut(s) 621, 1015
BseXI GCAGC 3 cut(s) 526, 814, 1047
Bsh1236I CGCG 1 cut(s) 1294
Bsh1285I CGRYCG 1 cut(s) 14
BshFI GGCC 2 cut(s) 5, 888
BshVI ATCGAT 1 cut(s) 10
BsiEI CGRYCG 1 cut(s) 14
BsiHKAI GWGCWC 1 cut(s) 621
BsiSI CCGG 2 cut(s) 375, 1188
BslFI GGGAC 1 cut(s) 317
BslI CCNNNNNNNGG 3 cut(s) 311, 340, 341
BsmAI GTCTC 3 cut(s) 203, 346, 1088
BsmBI CGTCTC 1 cut(s) 346
BsmFI GGGAC 1 cut(s) 317
BsmI GAATGC 1 cut(s) 123
BsnI GGCC 2 cut(s) 5, 888
Bso31I GGTCTC 2 cut(s) 203, 1088
Bsp1286I GDGCHC 2 cut(s) 621, 1015
Bsp143I GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
BspACI CCGC 3 cut(s) 606, 1260, 1470
BspANI GGCC 2 cut(s) 5, 888
BspCNI CTCAG 5 cut(s) 213, 274, 1179, 1312, 1405
BspDI ATCGAT 1 cut(s) 10
BspFNI CGCG 1 cut(s) 1294
BspLI GGNNCC 3 cut(s) 583, 631, 916
BspMAI CTGCAG 2 cut(s) 544, 832
BspPI GGATC 2 cut(s) 909, 922
BspQI GCTCTTC 1 cut(s) 123
BspTNI GGTCTC 2 cut(s) 203, 1088
BsrBI CCGCTC 1 cut(s) 1472
BsrFI RCCGGY 2 cut(s) 374, 1187
BsrI ACTGG 3 cut(s) 143, 335, 441
BssAI RCCGGY 2 cut(s) 374, 1187
BssECI CCNNGG 3 cut(s) 181, 290, 585
BssMI GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
BssT1I CCWWGG 3 cut(s) 181, 290, 585
Bst2UI CCWGG 1 cut(s) 1055
Bst4CI ACNGT 3 cut(s) 108, 219, 647
Bst6I CTCTTC 1 cut(s) 123
BstAPI GCANNNNNTGC 1 cut(s) 464
BstC8I GCNNGC 2 cut(s) 728, 839
BstDEI CTNAG 7 cut(s) 113, 200, 261, 602, 1166, 1299, 1413
BstEII GGTNACC 1 cut(s) 1149
BstF5I GGATG 4 cut(s) 526, 693, 757, 889
BstFNI CGCG 1 cut(s) 1294
BstHHI GCGC 1 cut(s) 1065
BstKTI GATC 6 cut(s) 14, 85, 393, 917, 1332, 1479
BstMAI GTCTC 3 cut(s) 203, 346, 1088
BstMBI GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
BstMCI CGRYCG 1 cut(s) 14
BstMWI GCNNNNNNNGC 5 cut(s) 118, 210, 464, 473, 761
BstNI CCWGG 1 cut(s) 1055
BstNSI RCATGY 2 cut(s) 734, 859
BstPI GGTNACC 1 cut(s) 1149
BstSCI CCNGG 1 cut(s) 1053
BstSFI CTRYAG 3 cut(s) 477, 540, 828
BstSLI GKGCMC 2 cut(s) 621, 1015
BstUI CGCG 1 cut(s) 1294
BstV1I GCAGC 3 cut(s) 526, 814, 1047
BstV2I GAAGAC 1 cut(s) 997
BstX2I RGATCY 2 cut(s) 82, 914
BstXI CCANNNNNNTGG 1 cut(s) 188
BstYI RGATCY 2 cut(s) 82, 914
Bsu15I ATCGAT 1 cut(s) 10
BsuRI GGCC 2 cut(s) 5, 888
BsuTUI ATCGAT 1 cut(s) 10
BtsCI GGATG 4 cut(s) 526, 693, 757, 889
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 4 cut(s) 136, 434, 837, 1486
Cac8I GCNNGC 2 cut(s) 728, 839
CfoI GCGC 1 cut(s) 1065
Cfr10I RCCGGY 2 cut(s) 374, 1187
Cfr13I GGNCC 2 cut(s) 630, 887
ClaI ATCGAT 1 cut(s) 10
Csp6I GTAC 7 cut(s) 28, 89, 220, 643, 868, 1268, 1296
CviAII CATG 8 cut(s) 397, 731, 804, 814, 856, 1219, 1254, 1277
CviQI GTAC 7 cut(s) 28, 89, 220, 643, 868, 1268, 1296
DdeI CTNAG 7 cut(s) 113, 200, 261, 602, 1166, 1299, 1413
DpnI GATC 6 cut(s) 13, 84, 392, 916, 1331, 1478
DpnII GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 123
EciI GGCGGA 1 cut(s) 1275
Eco130I CCWWGG 3 cut(s) 181, 290, 585
Eco31I GGTCTC 2 cut(s) 203, 1088
Eco47I GGWCC 1 cut(s) 630
Eco57I CTGAAG 2 cut(s) 998, 1094
Eco91I GGTNACC 1 cut(s) 1149
EcoO65I GGTNACC 1 cut(s) 1149
EcoRII CCWGG 1 cut(s) 1053
EcoT14I CCWWGG 3 cut(s) 181, 290, 585
ErhI CCWWGG 3 cut(s) 181, 290, 585
Esp3I CGTCTC 1 cut(s) 346
FaeI CATG 8 cut(s) 400, 734, 807, 817, 859, 1222, 1257, 1280
FaqI GGGAC 1 cut(s) 317
FatI CATG 8 cut(s) 396, 730, 803, 813, 855, 1218, 1253, 1276
FauNDI CATATG 1 cut(s) 1128
FbaI TGATCA 2 cut(s) 1329, 1476
Fnu4HI GCNGC 4 cut(s) 540, 607, 828, 1061
FokI GGATG 4 cut(s) 513, 700, 764, 896
Fsp4HI GCNGC 4 cut(s) 540, 607, 828, 1061
FspBI CTAG 2 cut(s) 719, 1244
FspI TGCGCA 1 cut(s) 1064
GlaI GCGC 1 cut(s) 1064
GluI GCNGC 4 cut(s) 540, 607, 828, 1061
GsuI CTGGAG 2 cut(s) 160, 489
HaeIII GGCC 2 cut(s) 5, 888
HapII CCGG 2 cut(s) 375, 1188
HhaI GCGC 1 cut(s) 1065
Hin1II CATG 8 cut(s) 400, 734, 807, 817, 859, 1222, 1257, 1280
Hin6I GCGC 1 cut(s) 1063
HinP1I GCGC 1 cut(s) 1063
HincII GTYRAC 3 cut(s) 321, 736, 1422
HindII GTYRAC 3 cut(s) 321, 736, 1422
HindIII AAGCTT 2 cut(s) 1076, 1488
HinfI GANTC 8 cut(s) 38, 280, 286, 421, 701, 875, 1140, 1388
HpaI GTTAAC 2 cut(s) 736, 1422
HpaII CCGG 2 cut(s) 375, 1188
HphI GGTGA 1 cut(s) 800
Hpy166II GTNNAC 7 cut(s) 321, 619, 643, 650, 736, 870, 1422
Hpy188I TCNGA 8 cut(s) 16, 264, 285, 696, 969, 978, 1074, 1476
Hpy188III TCNNGA 7 cut(s) 56, 749, 848, 994, 1035, 1043, 1333
Hpy8I GTNNAC 7 cut(s) 321, 619, 643, 650, 736, 870, 1422
HpyAV CCTTC 6 cut(s) 65, 717, 845, 900, 1190, 1433
HpyCH4III ACNGT 3 cut(s) 108, 219, 647
HpyCH4IV ACGT 1 cut(s) 270
HpyCH4V TGCA 9 cut(s) 427, 434, 542, 550, 619, 764, 830, 841, 935
HpyF10VI GCNNNNNNNGC 5 cut(s) 118, 210, 464, 473, 761
HpyF3I CTNAG 7 cut(s) 113, 200, 261, 602, 1166, 1299, 1413
HpySE526I ACGT 1 cut(s) 270
Hsp92II CATG 8 cut(s) 400, 734, 807, 817, 859, 1222, 1257, 1280
HspAI GCGC 1 cut(s) 1063
Ksp22I TGATCA 2 cut(s) 1329, 1476
KspAI GTTAAC 2 cut(s) 736, 1422
Kzo9I GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
LguI GCTCTTC 1 cut(s) 123
LmnI GCTCC 2 cut(s) 141, 1175
Lsp1109I GCAGC 3 cut(s) 526, 814, 1047
LweI GCATC 3 cut(s) 436, 487, 742
MaeI CTAG 2 cut(s) 719, 1244
MaeII ACGT 1 cut(s) 270
MaeIII GTNAC 6 cut(s) 344, 487, 505, 658, 1149, 1288
MalI GATC 6 cut(s) 13, 84, 392, 916, 1331, 1478
MbiI CCGCTC 1 cut(s) 1472
MboI GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
MboII GAAGA 9 cut(s) 76, 139, 140, 142, 253, 564, 991, 997, 1468
MfeI CAATTG 2 cut(s) 936, 1356
MflI RGATCY 2 cut(s) 82, 914
MhlI GDGCHC 2 cut(s) 621, 1015
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 936, 1356
MluI ACGCGT 1 cut(s) 1292
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 892
MnlI CCTC 6 cut(s) 10, 262, 315, 784, 1256, 1338
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 2 cut(s) 132, 983
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 300, 735, 1049, 1421
MslI CAYNNNNRTG 1 cut(s) 401
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 827
MspI CCGG 2 cut(s) 375, 1188
MspR9I CCNGG 1 cut(s) 1055
MunI CAATTG 2 cut(s) 936, 1356
Mva1269I GAATGC 1 cut(s) 123
MvaI CCWGG 1 cut(s) 1055
MvnI CGCG 1 cut(s) 1294
MwoI GCNNNNNNNGC 5 cut(s) 118, 210, 464, 473, 761
NdeI CATATG 1 cut(s) 1128
NdeII GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
NlaIII CATG 8 cut(s) 400, 734, 807, 817, 859, 1222, 1257, 1280
NlaIV GGNNCC 3 cut(s) 583, 631, 916
NmeAIII GCCGAG 1 cut(s) 22
NmuCI GTSAC 2 cut(s) 505, 658
NsbI TGCGCA 1 cut(s) 1064
NspI RCATGY 2 cut(s) 734, 859
PciSI GCTCTTC 1 cut(s) 123
PctI GAATGC 1 cut(s) 123
PdmI GAANNNNTTC 2 cut(s) 132, 983
PfeI GAWTC 8 cut(s) 38, 280, 286, 421, 701, 875, 1140, 1388
PkrI GCNGC 4 cut(s) 541, 608, 829, 1062
Ple19I CGATCG 1 cut(s) 14
Psp6I CCWGG 1 cut(s) 1053
PspEI GGTNACC 1 cut(s) 1149
PspGI CCWGG 1 cut(s) 1053
PspN4I GGNNCC 3 cut(s) 583, 631, 916
PspPI GGNCC 2 cut(s) 630, 887
PstI CTGCAG 2 cut(s) 544, 832
PsuI RGATCY 2 cut(s) 82, 914
PvuI CGATCG 1 cut(s) 14
PvuII CAGCTG 1 cut(s) 827
RsaI GTAC 7 cut(s) 29, 90, 221, 644, 869, 1269, 1297
RsaNI GTAC 7 cut(s) 28, 89, 220, 643, 868, 1268, 1296
RseI CAYNNNNRTG 1 cut(s) 401
SapI GCTCTTC 1 cut(s) 123
SaqAI TTAA 4 cut(s) 300, 735, 1049, 1421
SatI GCNGC 4 cut(s) 540, 607, 828, 1061
Sau3AI GATC 6 cut(s) 11, 82, 390, 914, 1329, 1476
Sau96I GGNCC 2 cut(s) 630, 887
ScaI AGTACT 2 cut(s) 221, 1269
ScrFI CCNGG 1 cut(s) 1055
SduI GDGCHC 2 cut(s) 621, 1015
SfaNI GCATC 3 cut(s) 436, 487, 742
SfcI CTRYAG 3 cut(s) 477, 540, 828
SinI GGWCC 1 cut(s) 630
SmiMI CAYNNNNRTG 1 cut(s) 401
SmlI CTYRAG 1 cut(s) 255
SmoI CTYRAG 1 cut(s) 255
Sse9I AATT 2 cut(s) 936, 1356
SsiI CCGC 3 cut(s) 606, 1260, 1470
SspMI CTAG 2 cut(s) 719, 1244
StyD4I CCNGG 1 cut(s) 1053
StyI CCWWGG 3 cut(s) 181, 290, 585
TaaI ACNGT 3 cut(s) 108, 219, 647
TaiI ACGT 1 cut(s) 273
TaqI TCGA 3 cut(s) 10, 126, 575
TasI AATT 2 cut(s) 936, 1356
TatI WGTACW 2 cut(s) 219, 1267
TauI GCSGC 1 cut(s) 609
TfiI GAWTC 8 cut(s) 38, 280, 286, 421, 701, 875, 1140, 1388
Tru1I TTAA 4 cut(s) 300, 735, 1049, 1421
Tru9I TTAA 4 cut(s) 300, 735, 1049, 1421
TscAI CASTG 4 cut(s) 143, 441, 837, 1486
TseFI GTSAC 2 cut(s) 505, 658
TseI GCWGC 3 cut(s) 539, 827, 1060
Tsp45I GTSAC 2 cut(s) 505, 658
TspDTI ATGAA 2 cut(s) 355, 802
TspGWI ACGGA 1 cut(s) 887
TspRI CASTG 4 cut(s) 143, 441, 837, 1486
VneI GTGCAC 1 cut(s) 617
VpaK11BI GGWCC 1 cut(s) 630
XceI RCATGY 2 cut(s) 734, 859
XmnI GAANNNNTTC 2 cut(s) 132, 983
XspI CTAG 2 cut(s) 719, 1244
ZrmI AGTACT 2 cut(s) 221, 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.