Prupe.3G104000_v2.0.a1

Transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
8182329 .. 8187137
4809 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G104000.2

Sequence Viewer

Length: 1500 bp
ATGGAAATGGAAGCAGAAGAACAGGAAAAAGAAAGTCTTCACCTTGAGGCTGAGAACCAAAAGCAGAAAACTTCAGTAAAGGGTGTCCGGGATTTGCTATGGACACCCATGAATTGGTTCAAAATGCTCAGCAGTGAGTTGCATTGGAGCTTTGTGGTGGGTGTGGTCATTGTGTACGGAATCAGTCAGGGTCTGAGTATGGGACTGAGTAGAATAGGTATACAGTATTACTTGAAAGATGATCAGAAAGTGCAGCCCTCTGAAGCACAAGTCTACTTTGGAATTATTCAAATTCCATGGATGGTTAAGCCTTTTTGGGGTCTTCTTACTGATACTCTTCCTATTCTTGGGTACCGCCGAAAGCCGTACTTTGTTTTTGCTGGTGTAATTGGGATGATCTCCATGCTTGTGCTATCACTAGACAAGAAATTAGATCTCACAATTTCCCTGTTGTCTCTGATGATGGGGAGTGCTGGAGTAGCAATAGCTGATGTAACAATTGATGCCTGTGTTACACAAAACAGTATAAGTCATCCATCCCTTGCTGGTGACATGCAAAGCTTGTGTGGACTGACCTCTTCAATTGGGGCACTGGTGGGATTTTCACTTAGTGGGTTTCTTGTTCACCTACTGGGCCCTAAGGGTGTCTTTGGATTGCTCAGCATCCCTCCAGGGCTGGTCATTTTGGTTGGGGTAATGCATAGAGAACCTCATGTTCGCACCTTCACTTATACACAGGTCAGTGTAAAGTTTCTGGATGCTTGCAAGACTATGTGGACAACTCTGAAATGTGGTAATGTCTGGAGGCCCTGTTTATACATGTACTTGTCACTTGCTTTGGCCTTGAATGTTCGTGAAGGAATGTTTTACTGGTACACCGATGCAAAGGGGGGTCCATCTTTCTCACAGGAGGTTGTTGGGTCCATATTCTCTATTGGTGCTGTTGGCTCTCTTTTTGGGGTCCTCCTTTACCAGAACTTCTTCAAAAGTTACCCCTTCAGGGATGTGCTTTTCTGGACGCAATTGCTCTATGGTGTATCAGGATTGCTAGACTTGATATTGGTGTTGCGCATAAATTTGAAATTTGGTTTACCAGATTATTTTTTTGTTGTCATTGACGAAGGCGTTACTCAGTTGATTGGGCGTATTAAGTGGATGCCTCTTCTTGTACTTAGTTCCAAACTCTGTCCTGCTGGTATAGAAGGCACTTTCTTTGCTTTGCTTATGTCTATTGATCATGTTGGAATGCTGTCATCTACTTGGGCTGGAGGCCTCTTACTCCACGTCTTGAAGATTACACGGACACAGTTTGAAAATCTTTGGATGGCAATTTTGATCCGGAGTTTGTTGAGAATTGTTCCGATTGCATTACTTTTCTTAATACCCAGAACTGATCCCAACTTATCCATTCTTCCACCTGAGATGTTGAGGACCAAAAAAGGTCATGATACACATGAGTATGAGAATATTGAAATGGCCTCCCTTGTGAATGCCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

500

Amino Acids

55.69

Weight (kDa)

7.64

Isoelectric Point (pI)

29.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1070
Acc65I GGTACC 1 cut(s) 351
AccB1I GGYRCC 1 cut(s) 351
AccB7I CCANNNNNTGG 1 cut(s) 114
AccI GTMKAC 2 cut(s) 220, 273
AccIII TCCGGA 1 cut(s) 1338
AciI CCGC 1 cut(s) 355
AclWI GGATC 2 cut(s) 1330, 1388
AcsI RAATTY 3 cut(s) 291, 1075, 1082
AcuI CTGAAG 3 cut(s) 57, 282, 982
AdeI CACNNNGTG 1 cut(s) 611
AfaI GTAC 6 cut(s) 176, 353, 368, 824, 875, 1170
AfiI CCNNNNNNNGG 4 cut(s) 114, 317, 347, 1000
AflIII ACRYGT 1 cut(s) 819
AjiI CACGTC 1 cut(s) 1285
AjnI CCWGG 1 cut(s) 670
AluBI AGCT 3 cut(s) 150, 488, 561
AluI AGCT 3 cut(s) 150, 488, 561
Alw26I GTCTC 1 cut(s) 459
AlwI GGATC 2 cut(s) 1330, 1388
AlwNI CAGNNNCTG 1 cut(s) 193
Aor13HI TCCGGA 1 cut(s) 1338
AoxI GGCC 5 cut(s) 634, 806, 840, 1270, 1476
ApaI GGGCCC 1 cut(s) 638
ApeKI GCWGC 1 cut(s) 253
ApoI RAATTY 3 cut(s) 291, 1075, 1082
Asp700I GAANNNNTTC 3 cut(s) 36, 116, 980
Asp718I GGTACC 1 cut(s) 351
AspLEI GCGC 1 cut(s) 1071
AspS9I GGNCC 7 cut(s) 634, 635, 807, 893, 921, 961, 1431
AsuC2I CCSGG 1 cut(s) 89
AsuHPI GGTGA 3 cut(s) 32, 560, 617
AvaII GGWCC 4 cut(s) 893, 921, 961, 1431
AxyI CCTNAGG 1 cut(s) 639
BaeGI GKGCMC 2 cut(s) 592, 638
BanI GGYRCC 1 cut(s) 351
BanII GRGCYC 1 cut(s) 638
BbsI GAAGAC 2 cut(s) 29, 314
BbvI GCAGC 1 cut(s) 265
BccI CCATC 5 cut(s) 295, 457, 544, 904, 1318
BceAI ACGGC 1 cut(s) 349
BciT130I CCWGG 1 cut(s) 672
BclI TGATCA 2 cut(s) 241, 1234
BcnI CCSGG 1 cut(s) 89
BcoDI GTCTC 1 cut(s) 459
BfaI CTAG 2 cut(s) 419, 1049
BglII AGATCT 1 cut(s) 433
BisI GCNGC 1 cut(s) 254
BlpI GCTNAGC 2 cut(s) 128, 659
BlsI GCNGC 1 cut(s) 255
Bme1390I CCNGG 2 cut(s) 89, 672
Bme18I GGWCC 4 cut(s) 893, 921, 961, 1431
BmgBI CACGTC 1 cut(s) 1285
BmgT120I GGNCC 7 cut(s) 634, 635, 807, 893, 921, 961, 1431
BmiI GGNNCC 5 cut(s) 353, 636, 894, 922, 962
BmrFI CCNGG 2 cut(s) 89, 672
BmrI ACTGGG 1 cut(s) 641
BmsI GCATC 5 cut(s) 493, 672, 748, 871, 1146
BmuI ACTGGG 1 cut(s) 641
BpiI GAAGAC 2 cut(s) 29, 314
BpmI CTGGAG 4 cut(s) 495, 654, 823, 1287
Bpu1102I GCTNAGC 2 cut(s) 128, 659
BpuEI CTTGAG 1 cut(s) 65
BpuMI CCSGG 1 cut(s) 89
BsaJI CCNNGG 2 cut(s) 296, 671
BsaWI WCCGGW 1 cut(s) 1338
BsaXI ACNNNNNCTCC 2 cut(s) 796, 826
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 317, 347, 1000
Bse1I ACTGG 3 cut(s) 597, 636, 875
Bse21I CCTNAGG 1 cut(s) 639
BseAI TCCGGA 1 cut(s) 1338
BseBI CCWGG 1 cut(s) 672
BseDI CCNNGG 2 cut(s) 296, 671
BseGI GGATG 9 cut(s) 306, 399, 532, 536, 663, 763, 1009, 1161, 1329
BseLI CCNNNNNNNGG 4 cut(s) 114, 317, 347, 1000
BseMII CTCAG 7 cut(s) 42, 142, 185, 197, 673, 1145, 1410
BseNI ACTGG 3 cut(s) 597, 636, 875
BseSI GKGCMC 2 cut(s) 592, 638
BseXI GCAGC 1 cut(s) 265
BsgI GTGCAG 1 cut(s) 272
BshFI GGCC 5 cut(s) 636, 808, 842, 1272, 1478
BshNI GGYRCC 1 cut(s) 351
BsiSI CCGG 2 cut(s) 88, 1339
BslFI GGGAC 1 cut(s) 216
BslI CCNNNNNNNGG 4 cut(s) 114, 317, 347, 1000
BsmAI GTCTC 1 cut(s) 459
BsmFI GGGAC 1 cut(s) 216
BsmI GAATGC 2 cut(s) 1251, 1495
BsnI GGCC 5 cut(s) 636, 808, 842, 1272, 1478
Bsp120I GGGCCC 1 cut(s) 634
Bsp1286I GDGCHC 2 cut(s) 592, 638
Bsp13I TCCGGA 1 cut(s) 1338
Bsp143I GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
Bsp1720I GCTNAGC 2 cut(s) 128, 659
Bsp19I CCATGG 1 cut(s) 296
BspACI CCGC 1 cut(s) 355
BspANI GGCC 5 cut(s) 636, 808, 842, 1272, 1478
BspCNI CTCAG 7 cut(s) 43, 141, 186, 198, 672, 1144, 1411
BspEI TCCGGA 1 cut(s) 1338
BspHI TCATGA 1 cut(s) 1444
BspLI GGNNCC 5 cut(s) 353, 636, 894, 922, 962
BspPI GGATC 2 cut(s) 1330, 1388
BspT107I GGYRCC 1 cut(s) 351
BsrI ACTGG 3 cut(s) 597, 636, 875
BssECI CCNNGG 2 cut(s) 296, 671
BssMI GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
BssNAI GTATAC 1 cut(s) 221
BssT1I CCWWGG 1 cut(s) 296
Bst1107I GTATAC 1 cut(s) 221
Bst2UI CCWGG 1 cut(s) 672
Bst4CI ACNGT 3 cut(s) 225, 524, 1308
Bst6I CTCTTC 3 cut(s) 342, 583, 1167
BstC8I GCNNGC 1 cut(s) 763
BstDSI CCRYGG 1 cut(s) 296
BstF5I GGATG 9 cut(s) 306, 399, 532, 536, 663, 763, 1009, 1161, 1329
BstHHI GCGC 1 cut(s) 1071
BstKTI GATC 6 cut(s) 244, 399, 436, 1237, 1338, 1396
BstMAI GTCTC 1 cut(s) 459
BstMBI GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
BstMWI GCNNNNNNNGC 1 cut(s) 479
BstNI CCWGG 1 cut(s) 672
BstNSI RCATGY 2 cut(s) 556, 823
BstSCI CCNGG 2 cut(s) 87, 670
BstSLI GKGCMC 2 cut(s) 592, 638
BstV1I GCAGC 1 cut(s) 265
BstV2I GAAGAC 2 cut(s) 29, 314
BstX2I RGATCY 1 cut(s) 433
BstYI RGATCY 1 cut(s) 433
BstZ17I GTATAC 1 cut(s) 221
Bsu36I CCTNAGG 1 cut(s) 639
BsuRI GGCC 5 cut(s) 636, 808, 842, 1272, 1478
BtgI CCRYGG 1 cut(s) 296
BtrI CACGTC 1 cut(s) 1285
BtsCI GGATG 9 cut(s) 306, 399, 532, 536, 663, 763, 1009, 1161, 1329
BtsI GCAGTG 1 cut(s) 139
BtsIMutI CAGTG 3 cut(s) 139, 590, 748
Cac8I GCNNGC 1 cut(s) 763
CaiI CAGNNNCTG 1 cut(s) 193
CciI TCATGA 1 cut(s) 1444
CfoI GCGC 1 cut(s) 1071
Cfr13I GGNCC 7 cut(s) 634, 635, 807, 893, 921, 961, 1431
CseI GACGC 1 cut(s) 1027
Csp6I GTAC 6 cut(s) 175, 352, 367, 823, 874, 1169
CviAII CATG 9 cut(s) 109, 297, 403, 553, 713, 820, 1238, 1445, 1454
CviQI GTAC 6 cut(s) 175, 352, 367, 823, 874, 1169
DpnI GATC 6 cut(s) 243, 398, 435, 1236, 1337, 1395
DpnII GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
DraIII CACNNNGTG 1 cut(s) 611
Eam1104I CTCTTC 3 cut(s) 342, 583, 1167
EarI CTCTTC 3 cut(s) 342, 583, 1167
Eco130I CCWWGG 1 cut(s) 296
Eco147I AGGCCT 1 cut(s) 1272
Eco24I GRGCYC 1 cut(s) 638
Eco47I GGWCC 4 cut(s) 893, 921, 961, 1431
Eco57I CTGAAG 3 cut(s) 57, 282, 982
Eco81I CCTNAGG 1 cut(s) 639
EcoO109I RGGNCCY 3 cut(s) 635, 807, 961
EcoRII CCWGG 1 cut(s) 670
EcoT14I CCWWGG 1 cut(s) 296
EcoT22I ATGCAT 1 cut(s) 702
EcoT38I GRGCYC 1 cut(s) 638
ErhI CCWWGG 1 cut(s) 296
FaeI CATG 9 cut(s) 112, 300, 406, 556, 716, 823, 1241, 1448, 1457
FalI AAGNNNNNCTT 6 cut(s) 21, 53, 353, 385, 632, 664
FaqI GGGAC 1 cut(s) 216
FatI CATG 9 cut(s) 108, 296, 402, 552, 712, 819, 1237, 1444, 1453
FbaI TGATCA 2 cut(s) 241, 1234
FblI GTMKAC 2 cut(s) 220, 273
Fnu4HI GCNGC 1 cut(s) 254
FokI GGATG 9 cut(s) 313, 406, 519, 523, 650, 770, 1016, 1168, 1336
FriOI GRGCYC 1 cut(s) 638
Fsp4HI GCNGC 1 cut(s) 254
FspBI CTAG 2 cut(s) 419, 1049
FspI TGCGCA 1 cut(s) 1070
GlaI GCGC 1 cut(s) 1070
GluI GCNGC 1 cut(s) 254
GsuI CTGGAG 4 cut(s) 495, 654, 823, 1287
HaeIII GGCC 5 cut(s) 636, 808, 842, 1272, 1478
HapII CCGG 2 cut(s) 88, 1339
HgaI GACGC 1 cut(s) 1027
HhaI GCGC 1 cut(s) 1071
Hin1II CATG 9 cut(s) 112, 300, 406, 556, 716, 823, 1241, 1448, 1457
Hin6I GCGC 1 cut(s) 1069
HinP1I GCGC 1 cut(s) 1069
HindIII AAGCTT 1 cut(s) 559
HinfI GANTC 1 cut(s) 180
HpaII CCGG 2 cut(s) 88, 1339
HphI GGTGA 3 cut(s) 32, 560, 617
Hpy166II GTNNAC 8 cut(s) 175, 221, 274, 569, 625, 777, 876, 1091
Hpy188I TCNGA 6 cut(s) 195, 246, 262, 459, 786, 1362
Hpy188III TCNNGA 8 cut(s) 755, 802, 854, 1015, 1041, 1288, 1339, 1445
Hpy8I GTNNAC 8 cut(s) 175, 221, 274, 569, 625, 777, 876, 1091
HpyAV CCTTC 5 cut(s) 733, 851, 1006, 1115, 1196
HpyCH4III ACNGT 3 cut(s) 225, 524, 1308
HpyCH4IV ACGT 1 cut(s) 1284
HpyCH4V TGCA 7 cut(s) 142, 253, 556, 700, 765, 884, 1367
HpyF10VI GCNNNNNNNGC 1 cut(s) 479
HpySE526I ACGT 1 cut(s) 1284
Hsp92II CATG 9 cut(s) 112, 300, 406, 556, 716, 823, 1241, 1448, 1457
HspAI GCGC 1 cut(s) 1069
Kpn2I TCCGGA 1 cut(s) 1338
KpnI GGTACC 1 cut(s) 355
Ksp22I TGATCA 2 cut(s) 241, 1234
Kzo9I GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
LmnI GCTCC 1 cut(s) 147
Lsp1109I GCAGC 1 cut(s) 265
LweI GCATC 5 cut(s) 493, 672, 748, 871, 1146
MaeI CTAG 2 cut(s) 419, 1049
MaeII ACGT 1 cut(s) 1284
MaeIII GTNAC 6 cut(s) 493, 511, 548, 828, 989, 1126
MalI GATC 6 cut(s) 243, 398, 435, 1236, 1337, 1395
MboI GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
MboII GAAGA 9 cut(s) 29, 29, 314, 329, 570, 973, 1154, 1303, 1403
MfeI CAATTG 3 cut(s) 498, 582, 1022
MflI RGATCY 1 cut(s) 433
MhlI GDGCHC 2 cut(s) 592, 638
MmeI TCCRAC 1 cut(s) 1222
Mph1103I ATGCAT 1 cut(s) 702
MroI TCCGGA 1 cut(s) 1338
MroXI GAANNNNTTC 3 cut(s) 36, 116, 980
MseI TTAA 3 cut(s) 306, 1149, 1379
MslI CAYNNNNRTG 2 cut(s) 407, 1458
MspI CCGG 2 cut(s) 88, 1339
MspR9I CCNGG 2 cut(s) 89, 672
MunI CAATTG 3 cut(s) 498, 582, 1022
Mva1269I GAATGC 2 cut(s) 1251, 1495
MvaI CCWGG 1 cut(s) 672
MwoI GCNNNNNNNGC 1 cut(s) 479
NciI CCSGG 1 cut(s) 89
NcoI CCATGG 1 cut(s) 296
NdeII GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
NlaIII CATG 9 cut(s) 112, 300, 406, 556, 716, 823, 1241, 1448, 1457
NlaIV GGNNCC 5 cut(s) 353, 636, 894, 922, 962
NmuCI GTSAC 2 cut(s) 548, 828
NsbI TGCGCA 1 cut(s) 1070
NsiI ATGCAT 1 cut(s) 702
NspI RCATGY 2 cut(s) 556, 823
PagI TCATGA 1 cut(s) 1444
PceI AGGCCT 1 cut(s) 1272
PciI ACATGT 1 cut(s) 819
PctI GAATGC 2 cut(s) 1251, 1495
PdmI GAANNNNTTC 3 cut(s) 36, 116, 980
PfeI GAWTC 1 cut(s) 180
PflMI CCANNNNNTGG 1 cut(s) 114
PfoI TCCNGGA 1 cut(s) 87
PkrI GCNGC 1 cut(s) 255
PpuMI RGGWCCY 1 cut(s) 961
PscI ACATGT 1 cut(s) 819
Psp5II RGGWCCY 1 cut(s) 961
Psp6I CCWGG 1 cut(s) 670
PspGI CCWGG 1 cut(s) 670
PspN4I GGNNCC 5 cut(s) 353, 636, 894, 922, 962
PspOMI GGGCCC 1 cut(s) 634
PspPI GGNCC 7 cut(s) 634, 635, 807, 893, 921, 961, 1431
PspPPI RGGWCCY 1 cut(s) 961
PstNI CAGNNNCTG 1 cut(s) 193
PsuI RGATCY 1 cut(s) 433
RsaI GTAC 6 cut(s) 176, 353, 368, 824, 875, 1170
RsaNI GTAC 6 cut(s) 175, 352, 367, 823, 874, 1169
RseI CAYNNNNRTG 2 cut(s) 407, 1458
SaqAI TTAA 3 cut(s) 306, 1149, 1379
SatI GCNGC 1 cut(s) 254
Sau3AI GATC 6 cut(s) 241, 396, 433, 1234, 1335, 1393
Sau96I GGNCC 7 cut(s) 634, 635, 807, 893, 921, 961, 1431
ScrFI CCNGG 2 cut(s) 89, 672
SduI GDGCHC 2 cut(s) 592, 638
SfaNI GCATC 5 cut(s) 493, 672, 748, 871, 1146
SinI GGWCC 4 cut(s) 893, 921, 961, 1431
SmiMI CAYNNNNRTG 2 cut(s) 407, 1458
SmlI CTYRAG 1 cut(s) 44
SmoI CTYRAG 1 cut(s) 44
SseBI AGGCCT 1 cut(s) 1272
SsiI CCGC 1 cut(s) 355
SspI AATATT 1 cut(s) 1468
SspMI CTAG 2 cut(s) 419, 1049
StuI AGGCCT 1 cut(s) 1272
StyD4I CCNGG 2 cut(s) 87, 670
StyI CCWWGG 1 cut(s) 296
TaaI ACNGT 3 cut(s) 225, 524, 1308
TaiI ACGT 1 cut(s) 1287
TatI WGTACW 2 cut(s) 822, 1168
TfiI GAWTC 1 cut(s) 180
Tru1I TTAA 3 cut(s) 306, 1149, 1379
Tru9I TTAA 3 cut(s) 306, 1149, 1379
TscAI CASTG 3 cut(s) 139, 597, 748
TseFI GTSAC 2 cut(s) 548, 828
TseI GCWGC 1 cut(s) 253
Tsp45I GTSAC 2 cut(s) 548, 828
TspDTI ATGAA 1 cut(s) 125
TspGWI ACGGA 2 cut(s) 192, 1315
TspRI CASTG 3 cut(s) 139, 597, 748
Van91I CCANNNNNTGG 1 cut(s) 114
VpaK11BI GGWCC 4 cut(s) 893, 921, 961, 1431
XapI RAATTY 3 cut(s) 291, 1075, 1082
XceI RCATGY 2 cut(s) 556, 823
XmiI GTMKAC 2 cut(s) 220, 273
XmnI GAANNNNTTC 3 cut(s) 36, 116, 980
XspI CTAG 2 cut(s) 419, 1049
Zsp2I ATGCAT 1 cut(s) 702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.