malic enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79750 |
| fragaria_vesca | FvH4_6g32330 FvH4_6g32330 FvH4_6g32330 |
| malus_domestica | MD09G1203300.v1.1 MD17G1184200.v1.1 |
| prunus_persica | Prupe.3G059400_v2.0.a1 Prupe.3G059400_v2.0.a1 Prupe.3G059400_v2.0.a1 |
| pyrus_communis | pycom09g12010 pycom17g19390 |
| rosa_chinensis | RchiOBHm_Chr2g0140441 |
| rosa_laevigata | RLG00000019867 |
| rosa_multiflora | Rmu_sc0003516.1_g000006 |
| rosa_roxburghii | Rroxscaffold_153G00436750 Rroxscaffold_2G00104830 |
| rosa_rugosa | Rorug02G0362900 Rorug02G0363000 Rorug02G0363100 Rorug02G0363200 Rorug02G0363300 |
| rosa_samantha | Rh2AG413500 Rh2BG423700 Rh2CG399700 Rh2DG433400 |
| rosa_wichuraiana | Rw2G033890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 593 |
| AccI | GTMKAC | 2 cut(s) | 255, 323 |
| AccII | CGCG | 1 cut(s) | 399 |
| AciI | CCGC | 6 cut(s) | 204, 207, 270, 399, 910, 1936 |
| AclWI | GGATC | 8 cut(s) | 137, 139, 150, 332, 513, 1140, 1153, 1684 |
| AcoI | YGGCCR | 2 cut(s) | 827, 1857 |
| AcsI | RAATTY | 1 cut(s) | 956 |
| AcuI | CTGAAG | 2 cut(s) | 419, 1771 |
| AfaI | GTAC | 3 cut(s) | 1057, 1528, 1913 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 525, 593, 1548, 1661 |
| AgsI | TTSAA | 8 cut(s) | 658, 886, 1010, 1075, 1230, 1287, 1325, 1333 |
| AjiI | CACGTC | 2 cut(s) | 556, 1450 |
| AjnI | CCWGG | 7 cut(s) | 46, 138, 510, 711, 1340, 1624, 1654 |
| Alw26I | GTCTC | 4 cut(s) | 161, 191, 306, 509 |
| AlwI | GGATC | 8 cut(s) | 137, 139, 150, 332, 513, 1140, 1153, 1684 |
| Ama87I | CYCGRG | 3 cut(s) | 194, 1175, 1667 |
| AoxI | GGCC | 7 cut(s) | 355, 400, 695, 827, 1539, 1839, 1857 |
| ApeKI | GCWGC | 6 cut(s) | 153, 1124, 1718, 1820, 1832, 1905 |
| ApoI | RAATTY | 1 cut(s) | 956 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1320 |
| AspLEI | GCGC | 3 cut(s) | 75, 741, 1594 |
| AsuC2I | CCSGG | 1 cut(s) | 1309 |
| AsuII | TTCGAA | 1 cut(s) | 1502 |
| AvaI | CYCGRG | 3 cut(s) | 194, 1175, 1667 |
| BaeGI | GKGCMC | 1 cut(s) | 1094 |
| BalI | TGGCCA | 1 cut(s) | 1859 |
| BamHI | GGATCC | 2 cut(s) | 142, 1145 |
| BanII | GRGCYC | 2 cut(s) | 909, 1348 |
| BauI | CACGAG | 2 cut(s) | 1277, 1861 |
| BbsI | GAAGAC | 1 cut(s) | 1017 |
| BbvCI | CCTCAGC | 3 cut(s) | 686, 1737, 1872 |
| BbvI | GCAGC | 6 cut(s) | 165, 1111, 1730, 1819, 1832, 1917 |
| BccI | CCATC | 5 cut(s) | 496, 725, 838, 1493, 1741 |
| BceAI | ACGGC | 3 cut(s) | 274, 1367, 1545 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 443, 477 |
| BciT130I | CCWGG | 7 cut(s) | 48, 140, 512, 713, 1342, 1626, 1656 |
| BclI | TGATCA | 1 cut(s) | 550 |
| BcnI | CCSGG | 1 cut(s) | 1309 |
| BcoDI | GTCTC | 4 cut(s) | 161, 191, 306, 509 |
| BfaI | CTAG | 1 cut(s) | 81 |
| BfmI | CTRYAG | 1 cut(s) | 924 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1388 |
| BglII | AGATCT | 2 cut(s) | 430, 757 |
| BisI | GCNGC | 9 cut(s) | 154, 207, 270, 400, 1125, 1719, 1821, 1833, 1906 |
| BlsI | GCNGC | 9 cut(s) | 155, 208, 271, 401, 1126, 1720, 1822, 1834, 1907 |
| Bme1390I | CCNGG | 8 cut(s) | 48, 140, 512, 713, 1309, 1342, 1626, 1656 |
| BmeT110I | CYCGRG | 3 cut(s) | 194, 1175, 1667 |
| BmgBI | CACGTC | 2 cut(s) | 556, 1450 |
| BmiI | GGNNCC | 3 cut(s) | 144, 908, 1147 |
| BmrFI | CCNGG | 8 cut(s) | 48, 140, 512, 713, 1309, 1342, 1626, 1656 |
| BmrI | ACTGGG | 1 cut(s) | 1859 |
| BmsI | GCATC | 4 cut(s) | 256, 1106, 1369, 1730 |
| BmuI | ACTGGG | 1 cut(s) | 1859 |
| BoxI | GACNNNNGTC | 1 cut(s) | 968 |
| BpiI | GAAGAC | 1 cut(s) | 1017 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 923, 955, 1855, 1887 |
| BpmI | CTGGAG | 3 cut(s) | 494, 1203, 1907 |
| Bpu10I | CCTNAGC | 4 cut(s) | 686, 1737, 1824, 1872 |
| Bpu14I | TTCGAA | 1 cut(s) | 1502 |
| BpuEI | CTTGAG | 3 cut(s) | 130, 1241, 1428 |
| BpuMI | CCSGG | 1 cut(s) | 1309 |
| Bsa29I | ATCGAT | 1 cut(s) | 855 |
| BsaAI | YACGTR | 1 cut(s) | 1548 |
| BsaBI | GATNNNNATC | 1 cut(s) | 342 |
| BsaI | GGTCTC | 4 cut(s) | 161, 191, 306, 509 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 387, 417 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 525, 593, 1548, 1661 |
| Bse118I | RCCGGY | 1 cut(s) | 149 |
| Bse1I | ACTGG | 6 cut(s) | 315, 698, 1201, 1595, 1854, 1860 |
| Bse8I | GATNNNNATC | 1 cut(s) | 342 |
| BseBI | CCWGG | 7 cut(s) | 48, 140, 512, 713, 1342, 1626, 1656 |
| BseCI | ATCGAT | 1 cut(s) | 855 |
| BseGI | GGATG | 7 cut(s) | 56, 182, 256, 271, 708, 770, 1776 |
| BseJI | GATNNNNATC | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 525, 593, 1548, 1661 |
| BseMII | CTCAG | 7 cut(s) | 677, 690, 1529, 1728, 1821, 1886, 1890 |
| BseNI | ACTGG | 6 cut(s) | 315, 698, 1201, 1595, 1854, 1860 |
| BseRI | GAGGAG | 4 cut(s) | 87, 178, 395, 575 |
| BseSI | GKGCMC | 1 cut(s) | 1094 |
| BseXI | GCAGC | 6 cut(s) | 165, 1111, 1730, 1819, 1832, 1917 |
| Bsh1236I | CGCG | 1 cut(s) | 399 |
| BshFI | GGCC | 7 cut(s) | 357, 402, 697, 829, 1541, 1841, 1859 |
| BshVI | ATCGAT | 1 cut(s) | 855 |
| BsiHKCI | CYCGRG | 3 cut(s) | 194, 1175, 1667 |
| BsiSI | CCGG | 3 cut(s) | 150, 826, 1309 |
| BslFI | GGGAC | 5 cut(s) | 877, 1222, 1572, 1699, 1866 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 525, 593, 1548, 1661 |
| BsmAI | GTCTC | 4 cut(s) | 161, 191, 306, 509 |
| BsmFI | GGGAC | 5 cut(s) | 877, 1222, 1572, 1699, 1866 |
| BsnI | GGCC | 7 cut(s) | 357, 402, 697, 829, 1541, 1841, 1859 |
| Bso31I | GGTCTC | 4 cut(s) | 161, 191, 306, 509 |
| BsoBI | CYCGRG | 3 cut(s) | 194, 1175, 1667 |
| Bsp119I | TTCGAA | 1 cut(s) | 1502 |
| Bsp1286I | GDGCHC | 3 cut(s) | 909, 1094, 1348 |
| Bsp1407I | TGTACA | 1 cut(s) | 1911 |
| Bsp19I | CCATGG | 1 cut(s) | 1461 |
| BspACI | CCGC | 6 cut(s) | 204, 207, 270, 399, 910, 1936 |
| BspANI | GGCC | 7 cut(s) | 357, 402, 697, 829, 1541, 1841, 1859 |
| BspCNI | CTCAG | 7 cut(s) | 678, 691, 1528, 1729, 1820, 1885, 1891 |
| BspDI | ATCGAT | 1 cut(s) | 855 |
| BspFNI | CGCG | 1 cut(s) | 399 |
| BspHI | TCATGA | 3 cut(s) | 676, 960, 1348 |
| BspLI | GGNNCC | 3 cut(s) | 144, 908, 1147 |
| BspPI | GGATC | 8 cut(s) | 137, 139, 150, 332, 513, 1140, 1153, 1684 |
| BspT104I | TTCGAA | 1 cut(s) | 1502 |
| BspTNI | GGTCTC | 4 cut(s) | 161, 191, 306, 509 |
| BsrFI | RCCGGY | 1 cut(s) | 149 |
| BsrGI | TGTACA | 1 cut(s) | 1911 |
| BsrI | ACTGG | 6 cut(s) | 315, 698, 1201, 1595, 1854, 1860 |
| BssAI | RCCGGY | 1 cut(s) | 149 |
| BssNAI | GTATAC | 1 cut(s) | 324 |
| BssSI | CACGAG | 2 cut(s) | 1277, 1861 |
| BssT1I | CCWWGG | 5 cut(s) | 296, 814, 1461, 1836, 1878 |
| Bst1107I | GTATAC | 1 cut(s) | 324 |
| Bst2BI | CACGAG | 2 cut(s) | 1277, 1861 |
| Bst2UI | CCWGG | 7 cut(s) | 48, 140, 512, 713, 1342, 1626, 1656 |
| Bst4CI | ACNGT | 5 cut(s) | 40, 232, 418, 592, 1405 |
| Bst6I | CTCTTC | 4 cut(s) | 465, 1175, 1248, 1530 |
| BstAUI | TGTACA | 1 cut(s) | 1911 |
| BstBAI | YACGTR | 1 cut(s) | 1548 |
| BstBI | TTCGAA | 1 cut(s) | 1502 |
| BstC8I | GCNNGC | 4 cut(s) | 77, 604, 1110, 1192 |
| BstDSI | CCRYGG | 1 cut(s) | 1461 |
| BstF5I | GGATG | 7 cut(s) | 56, 182, 256, 271, 708, 770, 1776 |
| BstFNI | CGCG | 1 cut(s) | 399 |
| BstHHI | GCGC | 3 cut(s) | 75, 741, 1594 |
| BstMAI | GTCTC | 4 cut(s) | 161, 191, 306, 509 |
| BstNI | CCWGG | 7 cut(s) | 48, 140, 512, 713, 1342, 1626, 1656 |
| BstNSI | RCATGY | 3 cut(s) | 286, 1711, 1912 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 968 |
| BstSCI | CCNGG | 8 cut(s) | 46, 138, 510, 711, 1307, 1340, 1624, 1654 |
| BstSFI | CTRYAG | 1 cut(s) | 924 |
| BstSLI | GKGCMC | 1 cut(s) | 1094 |
| BstUI | CGCG | 1 cut(s) | 399 |
| BstV1I | GCAGC | 6 cut(s) | 165, 1111, 1730, 1819, 1832, 1917 |
| BstV2I | GAAGAC | 1 cut(s) | 1017 |
| BstX2I | RGATCY | 6 cut(s) | 131, 142, 430, 505, 757, 1145 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 614, 1885 |
| BstYI | RGATCY | 6 cut(s) | 131, 142, 430, 505, 757, 1145 |
| BstZ17I | GTATAC | 1 cut(s) | 324 |
| Bsu15I | ATCGAT | 1 cut(s) | 855 |
| BsuRI | GGCC | 7 cut(s) | 357, 402, 697, 829, 1541, 1841, 1859 |
| BsuTUI | ATCGAT | 1 cut(s) | 855 |
| BtgI | CCRYGG | 1 cut(s) | 1461 |
| BtrI | CACGTC | 2 cut(s) | 556, 1450 |
| BtsCI | GGATG | 7 cut(s) | 56, 182, 256, 271, 708, 770, 1776 |
| BtsI | GCAGTG | 2 cut(s) | 171, 1898 |
| BtsIMutI | CAGTG | 6 cut(s) | 171, 322, 414, 726, 1194, 1898 |
| Cac8I | GCNNGC | 4 cut(s) | 77, 604, 1110, 1192 |
| CciI | TCATGA | 3 cut(s) | 676, 960, 1348 |
| CfoI | GCGC | 3 cut(s) | 75, 741, 1594 |
| Cfr10I | RCCGGY | 1 cut(s) | 149 |
| ClaI | ATCGAT | 1 cut(s) | 855 |
| CseI | GACGC | 2 cut(s) | 392, 620 |
| Csp6I | GTAC | 3 cut(s) | 1056, 1527, 1912 |
| CviQI | GTAC | 3 cut(s) | 1056, 1527, 1912 |
| EaeI | YGGCCR | 2 cut(s) | 827, 1857 |
| Eam1104I | CTCTTC | 4 cut(s) | 465, 1175, 1248, 1530 |
| EarI | CTCTTC | 4 cut(s) | 465, 1175, 1248, 1530 |
| EciI | GGCGGA | 2 cut(s) | 193, 899 |
| Eco130I | CCWWGG | 5 cut(s) | 296, 814, 1461, 1836, 1878 |
| Eco147I | AGGCCT | 3 cut(s) | 357, 1541, 1841 |
| Eco24I | GRGCYC | 2 cut(s) | 909, 1348 |
| Eco31I | GGTCTC | 4 cut(s) | 161, 191, 306, 509 |
| Eco57I | CTGAAG | 2 cut(s) | 419, 1771 |
| Eco88I | CYCGRG | 3 cut(s) | 194, 1175, 1667 |
| EcoRI | GAATTC | 1 cut(s) | 956 |
| EcoRII | CCWGG | 7 cut(s) | 46, 138, 510, 711, 1340, 1624, 1654 |
| EcoT14I | CCWWGG | 5 cut(s) | 296, 814, 1461, 1836, 1878 |
| EcoT22I | ATGCAT | 1 cut(s) | 954 |
| EcoT38I | GRGCYC | 2 cut(s) | 909, 1348 |
| ErhI | CCWWGG | 5 cut(s) | 296, 814, 1461, 1836, 1878 |
| FaqI | GGGAC | 5 cut(s) | 877, 1222, 1572, 1699, 1866 |
| FbaI | TGATCA | 1 cut(s) | 550 |
| FblI | GTMKAC | 2 cut(s) | 255, 323 |
| Fnu4HI | GCNGC | 9 cut(s) | 154, 207, 270, 400, 1125, 1719, 1821, 1833, 1906 |
| FokI | GGATG | 7 cut(s) | 63, 169, 263, 278, 695, 777, 1783 |
| FriOI | GRGCYC | 2 cut(s) | 909, 1348 |
| Fsp4HI | GCNGC | 9 cut(s) | 154, 207, 270, 400, 1125, 1719, 1821, 1833, 1906 |
| FspBI | CTAG | 1 cut(s) | 81 |
| GlaI | GCGC | 3 cut(s) | 74, 740, 1593 |
| GluI | GCNGC | 9 cut(s) | 154, 207, 270, 400, 1125, 1719, 1821, 1833, 1906 |
| GsuI | CTGGAG | 3 cut(s) | 494, 1203, 1907 |
| HaeIII | GGCC | 7 cut(s) | 357, 402, 697, 829, 1541, 1841, 1859 |
| HapII | CCGG | 3 cut(s) | 150, 826, 1309 |
| HgaI | GACGC | 2 cut(s) | 392, 620 |
| HhaI | GCGC | 3 cut(s) | 75, 741, 1594 |
| Hin6I | GCGC | 3 cut(s) | 73, 739, 1592 |
| HinP1I | GCGC | 3 cut(s) | 73, 739, 1592 |
| HindIII | AAGCTT | 1 cut(s) | 1728 |
| HinfI | GANTC | 7 cut(s) | 114, 673, 1164, 1283, 1316, 1552, 1665 |
| HpaII | CCGG | 3 cut(s) | 150, 826, 1309 |
| Hpy166II | GTNNAC | 3 cut(s) | 256, 324, 635 |
| Hpy188III | TCNNGA | 9 cut(s) | 194, 196, 248, 677, 961, 1220, 1349, 1445, 1789 |
| Hpy8I | GTNNAC | 3 cut(s) | 256, 324, 635 |
| Hpy99I | CGWCG | 1 cut(s) | 560 |
| HpyAV | CCTTC | 3 cut(s) | 1759, 1795, 1929 |
| HpyCH4III | ACNGT | 5 cut(s) | 40, 232, 418, 592, 1405 |
| HpyCH4IV | ACGT | 5 cut(s) | 326, 555, 1449, 1547, 1616 |
| HpyCH4V | TGCA | 5 cut(s) | 454, 484, 952, 1574, 1820 |
| HpySE526I | ACGT | 5 cut(s) | 326, 555, 1449, 1547, 1616 |
| HspAI | GCGC | 3 cut(s) | 73, 739, 1592 |
| Ksp22I | TGATCA | 1 cut(s) | 550 |
| LmnI | GCTCC | 4 cut(s) | 736, 912, 1882, 1888 |
| Lsp1109I | GCAGC | 6 cut(s) | 165, 1111, 1730, 1819, 1832, 1917 |
| LweI | GCATC | 4 cut(s) | 256, 1106, 1369, 1730 |
| MaeI | CTAG | 1 cut(s) | 81 |
| MaeII | ACGT | 5 cut(s) | 326, 555, 1449, 1547, 1616 |
| MaeIII | GTNAC | 3 cut(s) | 380, 724, 847 |
| MboII | GAAGA | 9 cut(s) | 425, 452, 715, 1022, 1162, 1265, 1276, 1547, 1642 |
| MflI | RGATCY | 6 cut(s) | 131, 142, 430, 505, 757, 1145 |
| MhlI | GDGCHC | 3 cut(s) | 909, 1094, 1348 |
| MlsI | TGGCCA | 1 cut(s) | 1859 |
| MluCI | AATT | 4 cut(s) | 90, 447, 956, 1212 |
| MluNI | TGGCCA | 1 cut(s) | 1859 |
| MlyI | GAGTC | 3 cut(s) | 123, 1561, 1659 |
| MmeI | TCCRAC | 1 cut(s) | 611 |
| Mox20I | TGGCCA | 1 cut(s) | 1859 |
| Mph1103I | ATGCAT | 1 cut(s) | 954 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1320 |
| MscI | TGGCCA | 1 cut(s) | 1859 |
| MseI | TTAA | 1 cut(s) | 441 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1353 |
| Msp20I | TGGCCA | 1 cut(s) | 1859 |
| MspA1I | CMGCKG | 1 cut(s) | 1938 |
| MspI | CCGG | 3 cut(s) | 150, 826, 1309 |
| MspR9I | CCNGG | 8 cut(s) | 48, 140, 512, 713, 1309, 1342, 1626, 1656 |
| MvaI | CCWGG | 7 cut(s) | 48, 140, 512, 713, 1342, 1626, 1656 |
| MvnI | CGCG | 1 cut(s) | 399 |
| NciI | CCSGG | 1 cut(s) | 1309 |
| NcoI | CCATGG | 1 cut(s) | 1461 |
| NlaIV | GGNNCC | 3 cut(s) | 144, 908, 1147 |
| NmuCI | GTSAC | 2 cut(s) | 380, 724 |
| NsiI | ATGCAT | 1 cut(s) | 954 |
| NspI | RCATGY | 3 cut(s) | 286, 1711, 1912 |
| NspV | TTCGAA | 1 cut(s) | 1502 |
| PaeR7I | CTCGAG | 1 cut(s) | 194 |
| PagI | TCATGA | 3 cut(s) | 676, 960, 1348 |
| PasI | CCCWGGG | 2 cut(s) | 1341, 1655 |
| PceI | AGGCCT | 3 cut(s) | 357, 1541, 1841 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1320 |
| PfeI | GAWTC | 4 cut(s) | 673, 1164, 1283, 1316 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 593 |
| PfoI | TCCNGGA | 3 cut(s) | 46, 510, 1307 |
| PkrI | GCNGC | 9 cut(s) | 155, 208, 271, 401, 1126, 1720, 1822, 1834, 1907 |
| PleI | GAGTC | 3 cut(s) | 122, 1560, 1659 |
| PpsI | GAGTC | 3 cut(s) | 122, 1560, 1659 |
| Ppu21I | YACGTR | 1 cut(s) | 1548 |
| PshAI | GACNNNNGTC | 1 cut(s) | 968 |
| Psp6I | CCWGG | 7 cut(s) | 46, 138, 510, 711, 1340, 1624, 1654 |
| PspGI | CCWGG | 7 cut(s) | 46, 138, 510, 711, 1340, 1624, 1654 |
| PspN4I | GGNNCC | 3 cut(s) | 144, 908, 1147 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 76, 108 |
| PsuI | RGATCY | 6 cut(s) | 131, 142, 430, 505, 757, 1145 |
| RsaI | GTAC | 3 cut(s) | 1057, 1528, 1913 |
| RsaNI | GTAC | 3 cut(s) | 1056, 1527, 1912 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1353 |
| SaqAI | TTAA | 1 cut(s) | 441 |
| SatI | GCNGC | 9 cut(s) | 154, 207, 270, 400, 1125, 1719, 1821, 1833, 1906 |
| SchI | GAGTC | 3 cut(s) | 123, 1561, 1659 |
| ScrFI | CCNGG | 8 cut(s) | 48, 140, 512, 713, 1309, 1342, 1626, 1656 |
| SduI | GDGCHC | 3 cut(s) | 909, 1094, 1348 |
| SfaNI | GCATC | 4 cut(s) | 256, 1106, 1369, 1730 |
| SfcI | CTRYAG | 1 cut(s) | 924 |
| Sfr274I | CTCGAG | 1 cut(s) | 194 |
| SfuI | TTCGAA | 1 cut(s) | 1502 |
| SlaI | CTCGAG | 1 cut(s) | 194 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1353 |
| SmlI | CTYRAG | 4 cut(s) | 109, 194, 1220, 1443 |
| SmoI | CTYRAG | 4 cut(s) | 109, 194, 1220, 1443 |
| Sse9I | AATT | 4 cut(s) | 90, 447, 956, 1212 |
| SseBI | AGGCCT | 3 cut(s) | 357, 1541, 1841 |
| SsiI | CCGC | 6 cut(s) | 204, 207, 270, 399, 910, 1936 |
| SspI | AATATT | 1 cut(s) | 1270 |
| SspMI | CTAG | 1 cut(s) | 81 |
| StuI | AGGCCT | 3 cut(s) | 357, 1541, 1841 |
| StyD4I | CCNGG | 8 cut(s) | 46, 138, 510, 711, 1307, 1340, 1624, 1654 |
| StyI | CCWWGG | 5 cut(s) | 296, 814, 1461, 1836, 1878 |
| TaaI | ACNGT | 5 cut(s) | 40, 232, 418, 592, 1405 |
| TaiI | ACGT | 5 cut(s) | 329, 558, 1452, 1550, 1619 |
| TaqI | TCGA | 5 cut(s) | 195, 558, 855, 1502, 1927 |
| TasI | AATT | 4 cut(s) | 90, 447, 956, 1212 |
| TatI | WGTACW | 1 cut(s) | 1911 |
| TauI | GCSGC | 3 cut(s) | 209, 272, 402 |
| TfiI | GAWTC | 4 cut(s) | 673, 1164, 1283, 1316 |
| Tru1I | TTAA | 1 cut(s) | 441 |
| Tru9I | TTAA | 1 cut(s) | 441 |
| TscAI | CASTG | 6 cut(s) | 178, 322, 421, 733, 1201, 1898 |
| TseFI | GTSAC | 2 cut(s) | 380, 724 |
| TseI | GCWGC | 6 cut(s) | 153, 1124, 1718, 1820, 1832, 1905 |
| Tsp45I | GTSAC | 2 cut(s) | 380, 724 |
| TspDTI | ATGAA | 6 cut(s) | 171, 665, 693, 949, 969, 1371 |
| TspGWI | ACGGA | 1 cut(s) | 1682 |
| TspRI | CASTG | 6 cut(s) | 178, 322, 421, 733, 1201, 1898 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 593 |
| XapI | RAATTY | 1 cut(s) | 956 |
| XceI | RCATGY | 3 cut(s) | 286, 1711, 1912 |
| XhoI | CTCGAG | 1 cut(s) | 194 |
| XmiI | GTMKAC | 2 cut(s) | 255, 323 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1320 |
| XspI | CTAG | 1 cut(s) | 81 |
| Zsp2I | ATGCAT | 1 cut(s) | 954 |