Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006459

Physical Location & Seq

Genomic Coordinates Reverse (-)

57715110 .. 57720894

Gene Structure 5785 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019867

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGATCTCGCTAAATAGAAGCTGCTTCCTGAGCAACGGGGGCATTTCTGGGAATTGTAGCCCGTTCTCTCAGGGGCAGAAGAGGCGGTCGGCTTCGCTGAAAGTGGTGGCTGTGGGGACGAACGCCGCCAGGAAAGGTGAACGAAACGGCAGCATAGTGATGGAGAACGTAGCAAAAGAAGTTGTTGAGCTGAAATCTACCGTCCATGGTGGGGACAAAGACGTGTATGGTGAGGATACTGCCAGCGAGGACCAACCTGTCACGCCATGGAGTGTGTCTGTTGCAAGTGGTTATAATTTGATACGAGATCCACACCACAACAAAGGTCTTGCCTTCTCTGAAAAGGAGAGAGATGCCCACTACATGCGTGGTCTTCTCCCCCCAGTTGTTATTTCTCAAGAACTTCAGGTGAAGAAAATGATAAACGCCATCCGTCAGTATCAAGTTCCCCTGCAGAAGTATATAGCCATGATGGATCTTCAGGAAAGAAACCAGAAGCTATTCTACAAGCTTCTTATTGAGCATGTTGAGGAATTACTCCCAGTTGTTTATACTCCAACCGTCGGTGAAGCTTGCCAGAAATATGGAAGCATTTTCCAGCGTCCCCAGGGTCTATTCATAAGTTTGAAAGAAAAGGGAAAGATTCTTGAAGTGTTGCGGAACTGGCCAGAGAAGAATATTCAAGTCATTGTTGTCACTGACGGAGAGCGTATCCTAGGGCTGGGGGATCTTGGCTGTCATGGGATGGGTATACCTGTTGGCAAACTTTCTCTATATACGGCACTTGGAGGAGTTCGTCCATCTGCTTGCTTGCCTGTAACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGGATGACGAGTTCTACATAGGGCTCAGGCAAAAGAGGGCAACTGGGCAGGAATATGCAGAACTCCTTCAAGAATTCATGACTGCTGTCAAGCAGAATTATGGAGAGAAAGTTCTTGTTCAGTTTGAGGACTTCGCAAACCACAATGCTTTTGATCTTCTTTCGAAGTATGGCGCAACTCATCTTGTTTTTAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGACTCTTGTCATCTTTGAAGTTAGTAGGAGGATCCTTAGCTGATCACACATTTTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGCATAGCGGAGCTCATAGCCCTTGAAATATCTAAGCAGACAAATGCCCCAGTGGAAGAGACTCGCAAGAAGGTTTGGCTTGTGGACTCGAAGGGATTGATTGTCAGTTCCCGGTTGGAATCACTCCAACATTTTAAAAAGCCTTGGGCTCATGAACATGAACCAGCAATCAAGCCAACGGTGTTGATTGGAACGTCAGGAGTAGGAAGAACATTTACTAAAGAAGTGGTTGAGGCTATGGCCGCCAACAATGAGAGACCCATTATTCTTGCTCTCTCCAACCCAACATCACAATCTGAGTGTACTGCAGAAGAAGCATATACATGGACACAGGGTCGTGCCATTTACTGTAGTGGAAGCCCATTCCCACCAGTTGAATACGAGGGAAAGGTTTACACTCCTGGCCAGTCAAATAATGCCTACATCTTCCCTGGATTTGGTCTTGGTTTATTGATGTCTGGTACTATTCGTGTTCATGATGACATGCTTCTGGCAGCTTCGGAAGCTTTGGCTTCACAGGTATCCCAGGAAGATTTTGACAAGGGACTTATATACCCTCCATTTACAAACATCAGAGAGATTTCAGCACATATTGCTGCTAAAGTAGCTGCTAAATCATATGAACTCGGATTGGCTACACGCCTCCCCCAGCCAAAGGATCTGTTCCAGTATGCTGAAAGCTGTATGTACAGCCCAAACTACCGAAGTTTCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004470 GO:0004473 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006090 GO:0006108 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008270 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016053 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0019752 GO:0022607 GO:0032787 GO:0042802 GO:0042803 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0046983 GO:0050897 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0055114 GO:0065003 GO:0071704 GO:0071840 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

628

Amino Acids

68.91

Weight (kDa)

6.31

Isoelectric Point (pI)

42.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	161 - 341	7.1e-78	Malic enzyme, N-terminal domain
Malic_M	PF03949	352 - 594	2e-89	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79750
fragaria_vesca	FvH4_6g32330 FvH4_6g32330 FvH4_6g32330
malus_domestica	MD09G1203300.v1.1 MD17G1184200.v1.1
prunus_persica	Prupe.3G059400_v2.0.a1 Prupe.3G059400_v2.0.a1 Prupe.3G059400_v2.0.a1
pyrus_communis	pycom09g12010 pycom17g19390
rosa_chinensis	RchiOBHm_Chr2g0140441
rosa_laevigata	RLG00000019867
rosa_multiflora	Rmu_sc0003516.1_g000006
rosa_roxburghii	Rroxscaffold_153G00436750 Rroxscaffold_2G00104830
rosa_rugosa	Rorug02G0362900 Rorug02G0363000 Rorug02G0363100 Rorug02G0363200 Rorug02G0363300
rosa_samantha	Rh2AG413500 Rh2BG423700 Rh2CG399700 Rh2DG433400
rosa_wichuraiana	Rw2G033890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	294
AasI	GACNNNNNNGTC	1 cut(s)	257
AccI	GTMKAC	1 cut(s)	751
AciI	CCGC	5 cut(s)	85, 126, 658, 1175, 1410
AclWI	GGATC	6 cut(s)	302, 483, 735, 1110, 1123, 1833
AcoI	YGGCCR	3 cut(s)	665, 1407, 1570
AcsI	RAATTY	1 cut(s)	926
AcuI	CTGAAG	2 cut(s)	389, 464
AfaI	GTAC	4 cut(s)	835, 1471, 1630, 1856
AfiI	CCNNNNNNNGG	5 cut(s)	211, 563, 721, 1604, 1822
AflIII	ACRYGT	1 cut(s)	222
AgsI	TTSAA	7 cut(s)	628, 650, 683, 923, 1102, 1193, 1544
AhdI	GACNNNNNGTC	1 cut(s)	1500
AjiI	CACGTC	1 cut(s)	223
AjnI	CCWGG	5 cut(s)	128, 606, 1567, 1597, 1692
AloI	GAACNNNNNNTCC	4 cut(s)	848, 880, 948, 980
Alw21I	GWGCWC	1 cut(s)	1182
Alw26I	GTCTC	2 cut(s)	1220, 1417
AlwI	GGATC	6 cut(s)	302, 483, 735, 1110, 1123, 1833
AlwNI	CAGNNNCTG	1 cut(s)	1070
AoxI	GGCC	3 cut(s)	665, 1407, 1570
ApeKI	GCWGC	5 cut(s)	21, 150, 1661, 1763, 1775
ApoI	RAATTY	1 cut(s)	926
Asp700I	GAANNNNTTC	2 cut(s)	500, 918
AspA2I	CCTAGG	1 cut(s)	715
AspLEI	GCGC	1 cut(s)	1028
AspS9I	GGNCC	2 cut(s)	250, 1075
AsuC2I	CCSGG	1 cut(s)	1279
AsuHPI	GGTGA	4 cut(s)	149, 242, 421, 578
AsuII	TTCGAA	1 cut(s)	1016
AvaII	GGWCC	2 cut(s)	250, 1075
AvrII	CCTAGG	1 cut(s)	715
BalI	TGGCCA	2 cut(s)	667, 1572
BamHI	GGATCC	1 cut(s)	1115
BanII	GRGCYC	3 cut(s)	879, 1182, 1318
BarI	GAAGNNNNNNTAC	4 cut(s)	488, 520, 1366, 1398
BbsI	GAAGAC	1 cut(s)	365
Bbv12I	GWGCWC	1 cut(s)	1182
BbvI	GCAGC	5 cut(s)	8, 162, 1673, 1750, 1762
BccI	CCATC	5 cut(s)	154, 437, 466, 739, 808
BceAI	ACGGC	2 cut(s)	163, 795
BciT130I	CCWGG	5 cut(s)	130, 608, 1569, 1599, 1694
BciVI	GTATCC	3 cut(s)	229, 722, 1699
BclI	TGATCA	1 cut(s)	1126
BcnI	CCSGG	1 cut(s)	1279
BcoDI	GTCTC	2 cut(s)	1220, 1417
BfaI	CTAG	1 cut(s)	716
BfmI	CTRYAG	3 cut(s)	452, 1473, 1516
BfuI	GTATCC	3 cut(s)	229, 722, 1699
BisI	GCNGC	7 cut(s)	22, 126, 151, 1410, 1662, 1764, 1776
BlnI	CCTAGG	1 cut(s)	715
BlsI	GCNGC	7 cut(s)	23, 127, 152, 1411, 1663, 1765, 1777
Bme1390I	CCNGG	6 cut(s)	130, 608, 1279, 1569, 1599, 1694
Bme18I	GGWCC	2 cut(s)	250, 1075
BmeRI	GACNNNNNGTC	1 cut(s)	1500
BmgBI	CACGTC	1 cut(s)	223
BmgT120I	GGNCC	2 cut(s)	250, 1075
BmiI	GGNNCC	1 cut(s)	1117
BmrFI	CCNGG	6 cut(s)	130, 608, 1279, 1569, 1599, 1694
BmrI	ACTGGG	4 cut(s)	377, 536, 906, 1211
BmsI	GCATC	2 cut(s)	343, 1076
BmuI	ACTGGG	4 cut(s)	377, 536, 906, 1211
BoxI	GACNNNNGTC	2 cut(s)	938, 1090
BpiI	GAAGAC	1 cut(s)	365
BpmI	CTGGAG	1 cut(s)	1173
Bpu10I	CCTNAGC	3 cut(s)	29, 878, 1120
Bpu14I	TTCGAA	1 cut(s)	1016
BpuEI	CTTGAG	1 cut(s)	381
BpuMI	CCSGG	1 cut(s)	1279
BsaI	GGTCTC	1 cut(s)	1417
BsaJI	CCNNGG	9 cut(s)	205, 266, 606, 607, 715, 1144, 1310, 1597, 1692
BsaWI	WCCGGW	1 cut(s)	1878
BsaXI	ACNNNNNCTCC	2 cut(s)	948, 978
Bsc4I	CCNNNNNNNGG	5 cut(s)	211, 563, 721, 1604, 1822
Bse1I	ACTGG	9 cut(s)	383, 542, 668, 901, 1171, 1217, 1538, 1573, 1834
BseBI	CCWGG	5 cut(s)	130, 608, 1569, 1599, 1694
BseDI	CCNNGG	9 cut(s)	205, 266, 606, 607, 715, 1144, 1310, 1597, 1692
BseGI	GGATG	3 cut(s)	429, 750, 862
BseLI	CCNNNNNNNGG	5 cut(s)	211, 563, 721, 1604, 1822
BseMII	CTCAG	4 cut(s)	20, 83, 892, 1455
BseNI	ACTGG	9 cut(s)	383, 542, 668, 901, 1171, 1217, 1538, 1573, 1834
BseRI	GAGGAG	1 cut(s)	804
BseXI	GCAGC	5 cut(s)	8, 162, 1673, 1750, 1762
BseYI	CCCAGC	2 cut(s)	721, 1815
Bsh1285I	CGRYCG	1 cut(s)	89
BshFI	GGCC	3 cut(s)	667, 1409, 1572
BsiEI	CGRYCG	1 cut(s)	89
BsiHKAI	GWGCWC	1 cut(s)	1182
BsiSI	CCGG	2 cut(s)	1279, 1879
BslFI	GGGAC	5 cut(s)	130, 227, 588, 1075, 1725
BslI	CCNNNNNNNGG	5 cut(s)	211, 563, 721, 1604, 1822
BsmAI	GTCTC	2 cut(s)	1220, 1417
BsmFI	GGGAC	5 cut(s)	130, 227, 588, 1075, 1725
BsnI	GGCC	3 cut(s)	667, 1409, 1572
Bso31I	GGTCTC	1 cut(s)	1417
Bsp119I	TTCGAA	1 cut(s)	1016
Bsp1286I	GDGCHC	3 cut(s)	879, 1182, 1318
Bsp1407I	TGTACA	1 cut(s)	1854
Bsp143I	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
Bsp19I	CCATGG	2 cut(s)	205, 266
BspACI	CCGC	5 cut(s)	85, 126, 658, 1175, 1410
BspANI	GGCC	3 cut(s)	667, 1409, 1572
BspCNI	CTCAG	4 cut(s)	21, 82, 891, 1456
BspHI	TCATGA	3 cut(s)	930, 1318, 1642
BspLI	GGNNCC	1 cut(s)	1117
BspMAI	CTGCAG	2 cut(s)	456, 1477
BspPI	GGATC	6 cut(s)	302, 483, 735, 1110, 1123, 1833
BspT104I	TTCGAA	1 cut(s)	1016
BspTNI	GGTCTC	1 cut(s)	1417
BsrGI	TGTACA	1 cut(s)	1854
BsrI	ACTGG	9 cut(s)	383, 542, 668, 901, 1171, 1217, 1538, 1573, 1834
BssECI	CCNNGG	9 cut(s)	205, 266, 606, 607, 715, 1144, 1310, 1597, 1692
BssMI	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
BssNAI	GTATAC	1 cut(s)	752
BssT1I	CCWWGG	5 cut(s)	205, 266, 715, 1144, 1310
Bst1107I	GTATAC	1 cut(s)	752
Bst2UI	CCWGG	5 cut(s)	130, 608, 1569, 1599, 1694
Bst4CI	ACNGT	4 cut(s)	202, 562, 1348, 1517
Bst6I	CTCTTC	2 cut(s)	74, 1218
BstAPI	GCANNNNNTGC	1 cut(s)	1760
BstAUI	TGTACA	1 cut(s)	1854
BstBI	TTCGAA	1 cut(s)	1016
BstC8I	GCNNGC	5 cut(s)	244, 574, 808, 812, 1162
BstDEI	CTNAG	6 cut(s)	29, 69, 878, 1120, 1200, 1464
BstDSI	CCRYGG	2 cut(s)	205, 266
BstF5I	GGATG	3 cut(s)	429, 750, 862
BstHHI	GCGC	1 cut(s)	1028
BstKTI	GATC	8 cut(s)	6, 310, 478, 730, 1009, 1118, 1129, 1828
BstMAI	GTCTC	2 cut(s)	1220, 1417
BstMBI	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
BstMCI	CGRYCG	1 cut(s)	89
BstNI	CCWGG	5 cut(s)	130, 608, 1569, 1599, 1694
BstNSI	RCATGY	3 cut(s)	367, 527, 1654
BstPAI	GACNNNNGTC	2 cut(s)	938, 1090
BstSCI	CCNGG	6 cut(s)	128, 606, 1277, 1567, 1597, 1692
BstSFI	CTRYAG	3 cut(s)	452, 1473, 1516
BstV1I	GCAGC	5 cut(s)	8, 162, 1673, 1750, 1762
BstV2I	GAAGAC	1 cut(s)	365
BstX2I	RGATCY	5 cut(s)	307, 475, 727, 1115, 1825
BstXI	CCANNNNNNTGG	2 cut(s)	584, 829
BstYI	RGATCY	5 cut(s)	307, 475, 727, 1115, 1825
BstZ17I	GTATAC	1 cut(s)	752
BsuI	GTATCC	3 cut(s)	229, 722, 1699
BsuRI	GGCC	3 cut(s)	667, 1409, 1572
BtgI	CCRYGG	2 cut(s)	205, 266
BtrI	CACGTC	1 cut(s)	223
BtsCI	GGATG	3 cut(s)	429, 750, 862
BtsIMutI	CAGTG	3 cut(s)	696, 1164, 1224
Cac8I	GCNNGC	5 cut(s)	244, 574, 808, 812, 1162
CaiI	CAGNNNCTG	1 cut(s)	1070
CciI	TCATGA	3 cut(s)	930, 1318, 1642
CfoI	GCGC	1 cut(s)	1028
Cfr13I	GGNCC	2 cut(s)	250, 1075
CseI	GACGC	1 cut(s)	590
Csp6I	GTAC	4 cut(s)	834, 1470, 1629, 1855
CviQI	GTAC	4 cut(s)	834, 1470, 1629, 1855
DdeI	CTNAG	6 cut(s)	29, 69, 878, 1120, 1200, 1464
DpnI	GATC	8 cut(s)	5, 309, 477, 729, 1008, 1117, 1128, 1827
DpnII	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
DraI	TTTAAA	1 cut(s)	1303
DrdI	GACNNNNNNGTC	1 cut(s)	257
DriI	GACNNNNNGTC	1 cut(s)	1500
DseDI	GACNNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	3 cut(s)	665, 1407, 1570
Eam1104I	CTCTTC	2 cut(s)	74, 1218
Eam1105I	GACNNNNNGTC	1 cut(s)	1500
EarI	CTCTTC	2 cut(s)	74, 1218
Ecl136II	GAGCTC	1 cut(s)	1180
Eco130I	CCWWGG	5 cut(s)	205, 266, 715, 1144, 1310
Eco24I	GRGCYC	3 cut(s)	879, 1182, 1318
Eco31I	GGTCTC	1 cut(s)	1417
Eco47I	GGWCC	2 cut(s)	250, 1075
Eco53kI	GAGCTC	1 cut(s)	1180
Eco57I	CTGAAG	2 cut(s)	389, 464
EcoICRI	GAGCTC	1 cut(s)	1180
EcoRI	GAATTC	1 cut(s)	926
EcoRII	CCWGG	5 cut(s)	128, 606, 1567, 1597, 1692
EcoT14I	CCWWGG	5 cut(s)	205, 266, 715, 1144, 1310
EcoT38I	GRGCYC	3 cut(s)	879, 1182, 1318
ErhI	CCWWGG	5 cut(s)	205, 266, 715, 1144, 1310
FaqI	GGGAC	5 cut(s)	130, 227, 588, 1075, 1725
FauNDI	CATATG	1 cut(s)	1786
FbaI	TGATCA	1 cut(s)	1126
FblI	GTMKAC	1 cut(s)	751
Fnu4HI	GCNGC	7 cut(s)	22, 126, 151, 1410, 1662, 1764, 1776
FokI	GGATG	3 cut(s)	416, 757, 869
FriOI	GRGCYC	3 cut(s)	879, 1182, 1318
Fsp4HI	GCNGC	7 cut(s)	22, 126, 151, 1410, 1662, 1764, 1776
FspBI	CTAG	1 cut(s)	716
GlaI	GCGC	1 cut(s)	1027
GluI	GCNGC	7 cut(s)	22, 126, 151, 1410, 1662, 1764, 1776
GsaI	CCCAGC	2 cut(s)	725, 1819
GsuI	CTGGAG	1 cut(s)	1173
HaeIII	GGCC	3 cut(s)	667, 1409, 1572
HapII	CCGG	2 cut(s)	1279, 1879
HgaI	GACGC	1 cut(s)	590
HhaI	GCGC	1 cut(s)	1028
Hin6I	GCGC	1 cut(s)	1026
HinP1I	GCGC	1 cut(s)	1026
HindIII	AAGCTT	3 cut(s)	509, 570, 1671
HinfI	GANTC	5 cut(s)	643, 1086, 1228, 1253, 1286
HpaII	CCGG	2 cut(s)	1279, 1879
HphI	GGTGA	4 cut(s)	149, 242, 421, 578
Hpy166II	GTNNAC	5 cut(s)	140, 752, 1252, 1470, 1561
Hpy188I	TCNGA	5 cut(s)	340, 1465, 1669, 1742, 1796
Hpy188III	TCNNGA	9 cut(s)	28, 398, 482, 647, 923, 931, 1319, 1365, 1643
Hpy8I	GTNNAC	5 cut(s)	140, 752, 1252, 1470, 1561
Hpy99I	CGWCG	1 cut(s)	566
HpyAV	CCTTC	4 cut(s)	343, 929, 1231, 1252
HpyCH4III	ACNGT	4 cut(s)	202, 562, 1348, 1517
HpyCH4IV	ACGT	3 cut(s)	168, 222, 1361
HpyCH4V	TGCA	5 cut(s)	284, 454, 911, 1082, 1475
HpyF3I	CTNAG	6 cut(s)	29, 69, 878, 1120, 1200, 1464
HpySE526I	ACGT	3 cut(s)	168, 222, 1361
HspAI	GCGC	1 cut(s)	1026
Ksp22I	TGATCA	1 cut(s)	1126
Kzo9I	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
LmnI	GCTCC	1 cut(s)	1177
Lsp1109I	GCAGC	5 cut(s)	8, 162, 1673, 1750, 1762
LweI	GCATC	2 cut(s)	343, 1076
MaeI	CTAG	1 cut(s)	716
MaeII	ACGT	3 cut(s)	168, 222, 1361
MaeIII	GTNAC	3 cut(s)	259, 694, 817
MalI	GATC	8 cut(s)	5, 309, 477, 729, 1008, 1117, 1128, 1827
MboI	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
MflI	RGATCY	5 cut(s)	307, 475, 727, 1115, 1825
MhlI	GDGCHC	3 cut(s)	879, 1182, 1318
MlsI	TGGCCA	2 cut(s)	667, 1572
MluCI	AATT	5 cut(s)	52, 295, 533, 926, 949
MluNI	TGGCCA	2 cut(s)	667, 1572
MlyI	GAGTC	3 cut(s)	1080, 1222, 1247
MmeI	TCCRAC	5 cut(s)	581, 834, 1263, 1318, 1470
Mox20I	TGGCCA	2 cut(s)	667, 1572
MroXI	GAANNNNTTC	2 cut(s)	500, 918
MscI	TGGCCA	2 cut(s)	667, 1572
MseI	TTAA	2 cut(s)	1044, 1302
MslI	CAYNNNNRTG	4 cut(s)	158, 827, 1323, 1489
Msp20I	TGGCCA	2 cut(s)	667, 1572
MspI	CCGG	2 cut(s)	1279, 1879
MspR9I	CCNGG	6 cut(s)	130, 608, 1279, 1569, 1599, 1694
MvaI	CCWGG	5 cut(s)	130, 608, 1569, 1599, 1694
NciI	CCSGG	1 cut(s)	1279
NcoI	CCATGG	2 cut(s)	205, 266
NdeI	CATATG	1 cut(s)	1786
NdeII	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
NlaIV	GGNNCC	1 cut(s)	1117
NmuCI	GTSAC	2 cut(s)	259, 694
NspI	RCATGY	3 cut(s)	367, 527, 1654
NspV	TTCGAA	1 cut(s)	1016
PagI	TCATGA	3 cut(s)	930, 1318, 1642
PasI	CCCWGGG	1 cut(s)	607
PdmI	GAANNNNTTC	2 cut(s)	500, 918
PfeI	GAWTC	2 cut(s)	643, 1286
PkrI	GCNGC	7 cut(s)	23, 127, 152, 1411, 1663, 1765, 1777
PleI	GAGTC	3 cut(s)	1080, 1222, 1247
PpsI	GAGTC	3 cut(s)	1080, 1222, 1247
PshAI	GACNNNNGTC	2 cut(s)	938, 1090
PsiI	TTATAA	1 cut(s)	294
Psp124BI	GAGCTC	1 cut(s)	1182
Psp6I	CCWGG	5 cut(s)	128, 606, 1567, 1597, 1692
PspFI	CCCAGC	2 cut(s)	721, 1815
PspGI	CCWGG	5 cut(s)	128, 606, 1567, 1597, 1692
PspN4I	GGNNCC	1 cut(s)	1117
PspPI	GGNCC	2 cut(s)	250, 1075
PstI	CTGCAG	2 cut(s)	456, 1477
PstNI	CAGNNNCTG	1 cut(s)	1070
PsuI	RGATCY	5 cut(s)	307, 475, 727, 1115, 1825
RsaI	GTAC	4 cut(s)	835, 1471, 1630, 1856
RsaNI	GTAC	4 cut(s)	834, 1470, 1629, 1855
RseI	CAYNNNNRTG	4 cut(s)	158, 827, 1323, 1489
SacI	GAGCTC	1 cut(s)	1182
SaqAI	TTAA	2 cut(s)	1044, 1302
SatI	GCNGC	7 cut(s)	22, 126, 151, 1410, 1662, 1764, 1776
Sau3AI	GATC	8 cut(s)	3, 307, 475, 727, 1006, 1115, 1126, 1825
Sau96I	GGNCC	2 cut(s)	250, 1075
SchI	GAGTC	3 cut(s)	1080, 1222, 1247
ScrFI	CCNGG	6 cut(s)	130, 608, 1279, 1569, 1599, 1694
SduI	GDGCHC	3 cut(s)	879, 1182, 1318
SfaNI	GCATC	2 cut(s)	343, 1076
SfcI	CTRYAG	3 cut(s)	452, 1473, 1516
SfuI	TTCGAA	1 cut(s)	1016
SinI	GGWCC	2 cut(s)	250, 1075
SmiMI	CAYNNNNRTG	4 cut(s)	158, 827, 1323, 1489
SmlI	CTYRAG	1 cut(s)	396
SmoI	CTYRAG	1 cut(s)	396
Sse9I	AATT	5 cut(s)	52, 295, 533, 926, 949
SsiI	CCGC	5 cut(s)	85, 126, 658, 1175, 1410
SspI	AATATT	1 cut(s)	679
SspMI	CTAG	1 cut(s)	716
SstI	GAGCTC	1 cut(s)	1182
StyD4I	CCNGG	6 cut(s)	128, 606, 1277, 1567, 1597, 1692
StyI	CCWWGG	5 cut(s)	205, 266, 715, 1144, 1310
TaaI	ACNGT	4 cut(s)	202, 562, 1348, 1517
TaiI	ACGT	3 cut(s)	171, 225, 1364
TaqI	TCGA	2 cut(s)	1016, 1256
TasI	AATT	5 cut(s)	52, 295, 533, 926, 949
TatI	WGTACW	2 cut(s)	1469, 1854
TauI	GCSGC	2 cut(s)	128, 1412
TfiI	GAWTC	2 cut(s)	643, 1286
Tru1I	TTAA	2 cut(s)	1044, 1302
Tru9I	TTAA	2 cut(s)	1044, 1302
TscAI	CASTG	3 cut(s)	703, 1171, 1224
TseFI	GTSAC	2 cut(s)	259, 694
TseI	GCWGC	5 cut(s)	21, 150, 1661, 1763, 1775
Tsp45I	GTSAC	2 cut(s)	259, 694
TspDTI	ATGAA	6 cut(s)	607, 919, 1335, 1341, 1631, 1803
TspGWI	ACGGA	2 cut(s)	422, 717
TspRI	CASTG	3 cut(s)	703, 1171, 1224
VpaK11BI	GGWCC	2 cut(s)	250, 1075
XapI	RAATTY	1 cut(s)	926
XceI	RCATGY	3 cut(s)	367, 527, 1654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	365
XmaJI	CCTAGG	1 cut(s)	715
XmiI	GTMKAC	1 cut(s)	751
XmnI	GAANNNNTTC	2 cut(s)	500, 918
XspI	CTAG	1 cut(s)	716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.