Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0006459

Physical Location & Seq

Genomic Coordinates Reverse (-)

4208582 .. 4215262

Gene Structure 6681 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G059400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGATGTCGTTGAATAGAAGCTGTTTTCTGGGCAACCCGGCAATCGCTGGGTCTTCTAGCCCGTTCTCTCATAGCCAGAAGAGGCGCTCAGCTTCGCTGAAAGTGGTGGCTTTGGTCCCAAAAGCCCGGACTGGTGACCGAAACGGCAGCGTAGTGATGGAGAGCACATTGCAGGAAGTGAAGGACGAATCCTCGGTTGTTGAGCTGAAATCCACCGTCCATGGTGGGGTCCAAGACGTGTATGGTGAGGATACTGCCACCGAGGATCAATTTGTCACACCCTGGAGTGTGTCTGTTGCTAGTGGATATACGTTGATACGGGATCCACACCACAACAAAGGTCTTGCCTTCACAGAGAAAGAGAGGGATGCTCATTACTTGCGTGGTCTTCTTCCCCCTGTTGTTATTTCTCAAGAACTTCAGGTGAAGAAAATGATAAATTGTATCCGCCAGTATCTAGTTCCTCTGCAGAAGTATATAGCCATGATGGATCTTCAGGGGAGAAATGAAAAGCTATTCTACAAGCTTCTTATTGACCATGTCGAGGAATTACTCCCAGTTGTATATACTCCTACTGTCGGTGAAGCTTGCCAGAAATATGGAAGCATATTTACGCATCCACACGGTCTTTTCATAAGTTTGAAAGACAAGGGCAAGATTCTTGAAGTGTTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTGTTGTCACTGATGGAGAGAGGATCCTTGGGCTGGGGGATCTTGGCTGTCATGGGATGGGTATACCTGTGGGTAAACTTGCTCTATATACGGCACTTGGAGGAGTTCGTCCTTCTGCTTGCTTGCCTGTAACCATTGATGTTGGTACAAACAATCAGAAGCTATTGGACGATGAGTTCTACATTGGACTCAGGCAAAAGAGGGCTACTGGACAGGAATATGCAGAACTTCTACAGGAATTCATGACTGCAGTCAAGCAGAATTATGGGGAGAAAATTCTCGTTCAGTTTGAAGACTTTGCGAACCACAATGCTTTTGATCTGCTGTCAAAGTATGGTACAACTCATCTTGTTTTTAATGATGACATTCAGGGGACAGCATCTGTGGTTCTTGCAGGACTTGTTGCAGCTTTGAAGTTAGTTGGGGGATCATTAGCTGACCACAGATTTTTATTCCTTGGTGCTGGAGAGGCGGGCACTGGCATAGCAGAACTGATAGCCCTTGAAGTTTCCAAACAGACAAATATCCCAGTGGAAGAAACCCGGAAGAACATTTGGCTTGTGGACTCAAAGGGATTGATTGTCAGTTCTAGGAAGGAATCACTCCAACATTTTAAAAAGCCGTGGGCTCATGAACATGAACCAGTCAAGGAACTTGTAGATGCTGTTAATGCAATCAAACCTACAGTGTTAATTGGAACGTCAGGAGCAGGAAGAACATTCACCAAAGAAGTGGTTGAGTCTATGGCCTCCCTCAATGAGAGACCTATTATCCTTGCTCTTTCCAACCCAACATCACAATCTGAATGTACTGCGGAAGAAGCATACACATGGACTCAGGGTCGTGCTATTTATTGTAGTGGAAGCCCATTCCCGCCTGTTGAATATGAGGGGAAGGTTTACACTCCTGGCCAGGCAAACAATGCATACATCTTCCCTGGATTTGGTCTGGGTTTAATCATGTCTGGTACCATCCGTGTTCACGACGACATGCTTCTGGCAGCCTCGGAAGCTTTGGCTTCACAGGTATCCCAGGAAGACTATGACAAGGGACTCATATACCCTCCATTTACAAACATTAGAAAGATTTCGGCACATATTGCTGCTAAAGTAGCTGCTAAATCATATGAACTGGGTTTGGCTACTCGCCTCCCTGAACCGAAGGATCTGGAGAAGTATGCTGAAAGCTGTATGTACAGCCCTTCCTATCGAAGTTTCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004470 GO:0004473 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006090 GO:0006108 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008270 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016053 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0019752 GO:0022607 GO:0032787 GO:0042802 GO:0042803 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0046983 GO:0050897 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0055114 GO:0065003 GO:0071704 GO:0071840 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

642

Amino Acids

70.45

Weight (kDa)

6.31

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79750
fragaria_vesca	FvH4_6g32330 FvH4_6g32330 FvH4_6g32330
malus_domestica	MD09G1203300.v1.1 MD17G1184200.v1.1
prunus_persica	Prupe.3G059400_v2.0.a1 Prupe.3G059400_v2.0.a1 Prupe.3G059400_v2.0.a1
pyrus_communis	pycom09g12010 pycom17g19390
rosa_chinensis	RchiOBHm_Chr2g0140441
rosa_laevigata	RLG00000019867
rosa_multiflora	Rmu_sc0003516.1_g000006
rosa_roxburghii	Rroxscaffold_153G00436750 Rroxscaffold_2G00104830
rosa_rugosa	Rorug02G0362900 Rorug02G0363000 Rorug02G0363100 Rorug02G0363200 Rorug02G0363300
rosa_samantha	Rh2AG413500 Rh2BG423700 Rh2CG399700 Rh2DG433400
rosa_wichuraiana	Rw2G033890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1670
AccB1I	GGYRCC	1 cut(s)	1670
AccI	GTMKAC	1 cut(s)	766
AciI	CCGC	4 cut(s)	448, 1175, 1517, 1577
AclWI	GGATC	9 cut(s)	273, 317, 330, 498, 721, 734, 750, 1138, 1875
AcoI	YGGCCR	1 cut(s)	1612
AcsI	RAATTY	2 cut(s)	941, 978
AcuI	CTGAAG	2 cut(s)	404, 479
AfaI	GTAC	5 cut(s)	850, 1042, 1513, 1672, 1898
AfiI	CCNNNNNNNGG	5 cut(s)	226, 544, 578, 736, 1646
AflIII	ACRYGT	1 cut(s)	237
AgsI	TTSAA	8 cut(s)	13, 643, 665, 698, 995, 1117, 1208, 1586
AhdI	GACNNNNNGTC	1 cut(s)	1542
AjiI	CACGTC	1 cut(s)	238
AjnI	CCWGG	5 cut(s)	281, 1609, 1614, 1639, 1734
AloI	GAACNNNNNNTCC	2 cut(s)	863, 895
Alw21I	GWGCWC	1 cut(s)	167
Alw26I	GTCTC	1 cut(s)	1459
AlwI	GGATC	9 cut(s)	273, 317, 330, 498, 721, 734, 750, 1138, 1875
AlwNI	CAGNNNCTG	1 cut(s)	1085
AoxI	GGCC	3 cut(s)	680, 1449, 1612
ApeKI	GCWGC	5 cut(s)	147, 1109, 1703, 1805, 1817
ApoI	RAATTY	2 cut(s)	941, 978
Asp700I	GAANNNNTTC	1 cut(s)	1789
Asp718I	GGTACC	1 cut(s)	1670
AspLEI	GCGC	1 cut(s)	87
AspS9I	GGNCC	2 cut(s)	115, 229
AsuC2I	CCSGG	3 cut(s)	38, 127, 1246
AsuHPI	GGTGA	5 cut(s)	146, 257, 436, 593, 1417
AvaII	GGWCC	2 cut(s)	115, 229
BaeGI	GKGCMC	1 cut(s)	1181
BalI	TGGCCA	1 cut(s)	1614
BamHI	GGATCC	2 cut(s)	322, 726
BanI	GGYRCC	1 cut(s)	1670
BanII	GRGCYC	1 cut(s)	1333
BarI	GAAGNNNNNNTAC	2 cut(s)	595, 627
BbsI	GAAGAC	4 cut(s)	45, 380, 1002, 1746
Bbv12I	GWGCWC	1 cut(s)	167
BbvI	GCAGC	5 cut(s)	159, 1121, 1715, 1792, 1804
BccI	CCATC	5 cut(s)	151, 481, 710, 754, 1682
BceAI	ACGGC	3 cut(s)	160, 810, 1309
BciT130I	CCWGG	5 cut(s)	283, 1611, 1616, 1641, 1736
BciVI	GTATCC	3 cut(s)	244, 455, 1741
BcnI	CCSGG	3 cut(s)	38, 127, 1246
BcoDI	GTCTC	1 cut(s)	1459
BfaI	CTAG	4 cut(s)	57, 300, 458, 1293
BfmI	CTRYAG	4 cut(s)	467, 935, 951, 1386
BfoI	RGCGCY	1 cut(s)	88
BfuI	GTATCC	3 cut(s)	244, 455, 1741
BisI	GCNGC	5 cut(s)	148, 1110, 1704, 1806, 1818
BlpI	GCTNAGC	1 cut(s)	88
BlsI	GCNGC	5 cut(s)	149, 1111, 1705, 1807, 1819
Bme1390I	CCNGG	8 cut(s)	38, 127, 283, 1246, 1611, 1616, 1641, 1736
Bme18I	GGWCC	2 cut(s)	115, 229
BmeRI	GACNNNNNGTC	1 cut(s)	1542
BmgBI	CACGTC	1 cut(s)	238
BmgT120I	GGNCC	2 cut(s)	115, 229
BmiI	GGNNCC	5 cut(s)	117, 230, 324, 728, 1672
BmrFI	CCNGG	8 cut(s)	38, 127, 283, 1246, 1611, 1616, 1641, 1736
BmrI	ACTGGG	3 cut(s)	551, 1226, 1844
BmsI	GCATC	4 cut(s)	358, 625, 1091, 1354
BmuI	ACTGGG	3 cut(s)	551, 1226, 1844
BoxI	GACNNNNGTC	1 cut(s)	953
BpiI	GAAGAC	4 cut(s)	45, 380, 1002, 1746
BplI	GAGNNNNNCTC	2 cut(s)	355, 387
BpmI	CTGGAG	3 cut(s)	304, 1188, 1892
Bpu1102I	GCTNAGC	1 cut(s)	88
BpuEI	CTTGAG	1 cut(s)	396
BpuMI	CCSGG	3 cut(s)	38, 127, 1246
BsaI	GGTCTC	1 cut(s)	1459
BsaWI	WCCGGW	1 cut(s)	1920
Bsc4I	CCNNNNNNNGG	5 cut(s)	226, 544, 578, 736, 1646
Bse1I	ACTGG	9 cut(s)	136, 451, 557, 683, 916, 1186, 1232, 1346, 1839
Bse3DI	GCAATG	1 cut(s)	167
BseBI	CCWGG	5 cut(s)	283, 1611, 1616, 1641, 1736
BseGI	GGATG	4 cut(s)	373, 616, 765, 1674
BseLI	CCNNNNNNNGG	5 cut(s)	226, 544, 578, 736, 1646
BseMI	GCAATG	1 cut(s)	167
BseMII	CTCAG	4 cut(s)	102, 675, 907, 1553
BseNI	ACTGG	9 cut(s)	136, 451, 557, 683, 916, 1186, 1232, 1346, 1839
BseRI	GAGGAG	1 cut(s)	819
BseSI	GKGCMC	1 cut(s)	1181
BseXI	GCAGC	5 cut(s)	159, 1121, 1715, 1792, 1804
BseYI	CCCAGC	2 cut(s)	47, 736
BshFI	GGCC	3 cut(s)	682, 1451, 1614
BshNI	GGYRCC	1 cut(s)	1670
BsiHKAI	GWGCWC	1 cut(s)	167
BsiSI	CCGG	4 cut(s)	38, 127, 1246, 1921
BslFI	GGGAC	3 cut(s)	101, 1090, 1767
BslI	CCNNNNNNNGG	5 cut(s)	226, 544, 578, 736, 1646
BsmAI	GTCTC	1 cut(s)	1459
BsmFI	GGGAC	3 cut(s)	101, 1090, 1767
BsnI	GGCC	3 cut(s)	682, 1451, 1614
Bso31I	GGTCTC	1 cut(s)	1459
Bsp1286I	GDGCHC	3 cut(s)	167, 1181, 1333
Bsp1407I	TGTACA	1 cut(s)	1896
Bsp143I	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
Bsp1720I	GCTNAGC	1 cut(s)	88
Bsp19I	CCATGG	1 cut(s)	220
BspACI	CCGC	4 cut(s)	448, 1175, 1517, 1577
BspANI	GGCC	3 cut(s)	682, 1451, 1614
BspCNI	CTCAG	4 cut(s)	101, 676, 906, 1552
BspHI	TCATGA	2 cut(s)	945, 1333
BspLI	GGNNCC	5 cut(s)	117, 230, 324, 728, 1672
BspMAI	CTGCAG	2 cut(s)	471, 955
BspPI	GGATC	9 cut(s)	273, 317, 330, 498, 721, 734, 750, 1138, 1875
BspT107I	GGYRCC	1 cut(s)	1670
BspTNI	GGTCTC	1 cut(s)	1459
BsrDI	GCAATG	1 cut(s)	167
BsrGI	TGTACA	1 cut(s)	1896
BsrI	ACTGG	9 cut(s)	136, 451, 557, 683, 916, 1186, 1232, 1346, 1839
BssMI	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
BssNAI	GTATAC	1 cut(s)	767
BssT1I	CCWWGG	3 cut(s)	220, 730, 1159
Bst1107I	GTATAC	1 cut(s)	767
Bst2UI	CCWGG	5 cut(s)	283, 1611, 1616, 1641, 1736
Bst4CI	ACNGT	4 cut(s)	217, 577, 626, 1390
Bst6I	CTCTTC	1 cut(s)	74
BstAPI	GCANNNNNTGC	2 cut(s)	1625, 1802
BstAUI	TGTACA	1 cut(s)	1896
BstC8I	GCNNGC	4 cut(s)	589, 823, 827, 1177
BstDEI	CTNAG	4 cut(s)	88, 684, 893, 1539
BstDSI	CCRYGG	2 cut(s)	220, 1325
BstEII	GGTNACC	1 cut(s)	134
BstF5I	GGATG	4 cut(s)	373, 616, 765, 1674
BstH2I	RGCGCY	1 cut(s)	88
BstHHI	GCGC	1 cut(s)	87
BstKTI	GATC	8 cut(s)	268, 325, 493, 729, 745, 1024, 1133, 1870
BstMAI	GTCTC	1 cut(s)	1459
BstMBI	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
BstMWI	GCNNNNNNNGC	7 cut(s)	1172, 1373, 1523, 1625, 1712, 1802, 1814
BstNI	CCWGG	5 cut(s)	283, 1611, 1616, 1641, 1736
BstNSI	RCATGY	1 cut(s)	1696
BstPAI	GACNNNNGTC	1 cut(s)	953
BstPI	GGTNACC	1 cut(s)	134
BstSCI	CCNGG	8 cut(s)	36, 125, 281, 1244, 1609, 1614, 1639, 1734
BstSFI	CTRYAG	4 cut(s)	467, 935, 951, 1386
BstSLI	GKGCMC	1 cut(s)	1181
BstV1I	GCAGC	5 cut(s)	159, 1121, 1715, 1792, 1804
BstV2I	GAAGAC	4 cut(s)	45, 380, 1002, 1746
BstX2I	RGATCY	5 cut(s)	322, 490, 726, 742, 1867
BstXI	CCANNNNNNTGG	2 cut(s)	599, 1435
BstYI	RGATCY	5 cut(s)	322, 490, 726, 742, 1867
BstZ17I	GTATAC	1 cut(s)	767
BsuI	GTATCC	3 cut(s)	244, 455, 1741
BsuRI	GGCC	3 cut(s)	682, 1451, 1614
BtgI	CCRYGG	2 cut(s)	220, 1325
BtrI	CACGTC	1 cut(s)	238
BtsCI	GGATG	4 cut(s)	373, 616, 765, 1674
BtsIMutI	CAGTG	4 cut(s)	711, 1179, 1239, 1395
Cac8I	GCNNGC	4 cut(s)	589, 823, 827, 1177
CaiI	CAGNNNCTG	1 cut(s)	1085
CciI	TCATGA	2 cut(s)	945, 1333
CfoI	GCGC	1 cut(s)	87
Cfr13I	GGNCC	2 cut(s)	115, 229
Csp6I	GTAC	5 cut(s)	849, 1041, 1512, 1671, 1897
CviQI	GTAC	5 cut(s)	849, 1041, 1512, 1671, 1897
DdeI	CTNAG	4 cut(s)	88, 684, 893, 1539
DpnI	GATC	8 cut(s)	267, 324, 492, 728, 744, 1023, 1132, 1869
DpnII	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
DraI	TTTAAA	1 cut(s)	1318
DriI	GACNNNNNGTC	1 cut(s)	1542
EaeI	YGGCCR	1 cut(s)	1612
Eam1104I	CTCTTC	1 cut(s)	74
Eam1105I	GACNNNNNGTC	1 cut(s)	1542
EarI	CTCTTC	1 cut(s)	74
EciI	GGCGGA	1 cut(s)	437
Eco130I	CCWWGG	3 cut(s)	220, 730, 1159
Eco24I	GRGCYC	1 cut(s)	1333
Eco31I	GGTCTC	1 cut(s)	1459
Eco47I	GGWCC	2 cut(s)	115, 229
Eco57I	CTGAAG	2 cut(s)	404, 479
Eco91I	GGTNACC	1 cut(s)	134
EcoO65I	GGTNACC	1 cut(s)	134
EcoRI	GAATTC	1 cut(s)	941
EcoRII	CCWGG	5 cut(s)	281, 1609, 1614, 1639, 1734
EcoT14I	CCWWGG	3 cut(s)	220, 730, 1159
EcoT22I	ATGCAT	1 cut(s)	1630
EcoT38I	GRGCYC	1 cut(s)	1333
ErhI	CCWWGG	3 cut(s)	220, 730, 1159
FaqI	GGGAC	3 cut(s)	101, 1090, 1767
FauI	CCCGC	2 cut(s)	1168, 1584
FauNDI	CATATG	1 cut(s)	1828
FblI	GTMKAC	1 cut(s)	766
Fnu4HI	GCNGC	5 cut(s)	148, 1110, 1704, 1806, 1818
FokI	GGATG	4 cut(s)	380, 603, 772, 1661
FriOI	GRGCYC	1 cut(s)	1333
Fsp4HI	GCNGC	5 cut(s)	148, 1110, 1704, 1806, 1818
FspBI	CTAG	4 cut(s)	57, 300, 458, 1293
GlaI	GCGC	1 cut(s)	86
GluI	GCNGC	5 cut(s)	148, 1110, 1704, 1806, 1818
GsaI	CCCAGC	2 cut(s)	51, 740
GsuI	CTGGAG	3 cut(s)	304, 1188, 1892
HaeII	RGCGCY	1 cut(s)	88
HaeIII	GGCC	3 cut(s)	682, 1451, 1614
HapII	CCGG	4 cut(s)	38, 127, 1246, 1921
HhaI	GCGC	1 cut(s)	87
Hin6I	GCGC	1 cut(s)	85
HinP1I	GCGC	1 cut(s)	85
HindIII	AAGCTT	3 cut(s)	524, 585, 1713
HinfI	GANTC	8 cut(s)	188, 658, 891, 1268, 1301, 1442, 1537, 1755
HpaII	CCGG	4 cut(s)	38, 127, 1246, 1921
HphI	GGTGA	5 cut(s)	146, 257, 436, 593, 1417
Hpy166II	GTNNAC	5 cut(s)	767, 779, 1267, 1603, 1684
Hpy188I	TCNGA	3 cut(s)	861, 1507, 1711
Hpy188III	TCNNGA	7 cut(s)	413, 662, 946, 1334, 1407, 1685, 1871
Hpy8I	GTNNAC	5 cut(s)	767, 779, 1267, 1603, 1684
Hpy99I	CGWCG	1 cut(s)	1691
HpyAV	CCTTC	7 cut(s)	175, 358, 825, 1291, 1591, 1858, 1914
HpyCH4III	ACNGT	4 cut(s)	217, 577, 626, 1390
HpyCH4IV	ACGT	3 cut(s)	237, 311, 1403
HpyCH4V	TGCA	8 cut(s)	172, 469, 926, 953, 1097, 1109, 1376, 1628
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1172, 1373, 1523, 1625, 1712, 1802, 1814
HpyF3I	CTNAG	4 cut(s)	88, 684, 893, 1539
HpySE526I	ACGT	3 cut(s)	237, 311, 1403
HspAI	GCGC	1 cut(s)	85
KpnI	GGTACC	1 cut(s)	1674
Kzo9I	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
LmnI	GCTCC	1 cut(s)	1409
Lsp1109I	GCAGC	5 cut(s)	159, 1121, 1715, 1792, 1804
LweI	GCATC	4 cut(s)	358, 625, 1091, 1354
MaeI	CTAG	4 cut(s)	57, 300, 458, 1293
MaeII	ACGT	3 cut(s)	237, 311, 1403
MaeIII	GTNAC	4 cut(s)	134, 274, 709, 832
MalI	GATC	8 cut(s)	267, 324, 492, 728, 744, 1023, 1132, 1869
MboI	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
MflI	RGATCY	5 cut(s)	322, 490, 726, 742, 1867
MhlI	GDGCHC	3 cut(s)	167, 1181, 1333
MlsI	TGGCCA	1 cut(s)	1614
MluCI	AATT	7 cut(s)	269, 439, 548, 941, 964, 978, 1395
MluNI	TGGCCA	1 cut(s)	1614
MlyI	GAGTC	5 cut(s)	885, 1262, 1451, 1531, 1749
MmeI	TCCRAC	2 cut(s)	1333, 1512
Mox20I	TGGCCA	1 cut(s)	1614
Mph1103I	ATGCAT	1 cut(s)	1630
MroXI	GAANNNNTTC	1 cut(s)	1789
MscI	TGGCCA	1 cut(s)	1614
MseI	TTAA	5 cut(s)	1059, 1317, 1371, 1394, 1658
MslI	CAYNNNNRTG	2 cut(s)	1338, 1531
Msp20I	TGGCCA	1 cut(s)	1614
MspI	CCGG	4 cut(s)	38, 127, 1246, 1921
MspR9I	CCNGG	8 cut(s)	38, 127, 283, 1246, 1611, 1616, 1641, 1736
MvaI	CCWGG	5 cut(s)	283, 1611, 1616, 1641, 1736
MwoI	GCNNNNNNNGC	7 cut(s)	1172, 1373, 1523, 1625, 1712, 1802, 1814
NciI	CCSGG	3 cut(s)	38, 127, 1246
NcoI	CCATGG	1 cut(s)	220
NdeI	CATATG	1 cut(s)	1828
NdeII	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
NlaIV	GGNNCC	5 cut(s)	117, 230, 324, 728, 1672
NmuCI	GTSAC	3 cut(s)	134, 274, 709
NsiI	ATGCAT	1 cut(s)	1630
NspI	RCATGY	1 cut(s)	1696
PagI	TCATGA	2 cut(s)	945, 1333
PdmI	GAANNNNTTC	1 cut(s)	1789
PfeI	GAWTC	3 cut(s)	188, 658, 1301
PflFI	GACNNNGTC	1 cut(s)	539
PkrI	GCNGC	5 cut(s)	149, 1111, 1705, 1807, 1819
PleI	GAGTC	5 cut(s)	885, 1262, 1450, 1531, 1749
PpsI	GAGTC	5 cut(s)	885, 1262, 1450, 1531, 1749
PshAI	GACNNNNGTC	1 cut(s)	953
Psp6I	CCWGG	5 cut(s)	281, 1609, 1614, 1639, 1734
PspEI	GGTNACC	1 cut(s)	134
PspFI	CCCAGC	2 cut(s)	47, 736
PspGI	CCWGG	5 cut(s)	281, 1609, 1614, 1639, 1734
PspN4I	GGNNCC	5 cut(s)	117, 230, 324, 728, 1672
PspPI	GGNCC	2 cut(s)	115, 229
PstI	CTGCAG	2 cut(s)	471, 955
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	5 cut(s)	322, 490, 726, 742, 1867
PsyI	GACNNNGTC	1 cut(s)	539
RsaI	GTAC	5 cut(s)	850, 1042, 1513, 1672, 1898
RsaNI	GTAC	5 cut(s)	849, 1041, 1512, 1671, 1897
RseI	CAYNNNNRTG	2 cut(s)	1338, 1531
SaqAI	TTAA	5 cut(s)	1059, 1317, 1371, 1394, 1658
SatI	GCNGC	5 cut(s)	148, 1110, 1704, 1806, 1818
Sau3AI	GATC	8 cut(s)	265, 322, 490, 726, 742, 1021, 1130, 1867
Sau96I	GGNCC	2 cut(s)	115, 229
SchI	GAGTC	5 cut(s)	885, 1262, 1451, 1531, 1749
ScrFI	CCNGG	8 cut(s)	38, 127, 283, 1246, 1611, 1616, 1641, 1736
SduI	GDGCHC	3 cut(s)	167, 1181, 1333
SfaNI	GCATC	4 cut(s)	358, 625, 1091, 1354
SfcI	CTRYAG	4 cut(s)	467, 935, 951, 1386
SinI	GGWCC	2 cut(s)	115, 229
SmiMI	CAYNNNNRTG	2 cut(s)	1338, 1531
SmlI	CTYRAG	1 cut(s)	411
SmoI	CTYRAG	1 cut(s)	411
Sse9I	AATT	7 cut(s)	269, 439, 548, 941, 964, 978, 1395
SsiI	CCGC	4 cut(s)	448, 1175, 1517, 1577
SspI	AATATT	1 cut(s)	694
SspMI	CTAG	4 cut(s)	57, 300, 458, 1293
StyD4I	CCNGG	8 cut(s)	36, 125, 281, 1244, 1609, 1614, 1639, 1734
StyI	CCWWGG	3 cut(s)	220, 730, 1159
TaaI	ACNGT	4 cut(s)	217, 577, 626, 1390
TaiI	ACGT	3 cut(s)	240, 314, 1406
TaqI	TCGA	2 cut(s)	543, 1912
TaqII	GACCGA	1 cut(s)	153
TasI	AATT	7 cut(s)	269, 439, 548, 941, 964, 978, 1395
TatI	WGTACW	2 cut(s)	1511, 1896
TfiI	GAWTC	3 cut(s)	188, 658, 1301
Tru1I	TTAA	5 cut(s)	1059, 1317, 1371, 1394, 1658
Tru9I	TTAA	5 cut(s)	1059, 1317, 1371, 1394, 1658
TscAI	CASTG	4 cut(s)	718, 1186, 1239, 1395
TseFI	GTSAC	3 cut(s)	134, 274, 709
TseI	GCWGC	5 cut(s)	147, 1109, 1703, 1805, 1817
Tsp45I	GTSAC	3 cut(s)	134, 274, 709
TspDTI	ATGAA	6 cut(s)	522, 622, 934, 1350, 1356, 1845
TspGWI	ACGGA	1 cut(s)	1667
TspRI	CASTG	4 cut(s)	718, 1186, 1239, 1395
Tth111I	GACNNNGTC	1 cut(s)	539
VpaK11BI	GGWCC	2 cut(s)	115, 229
XapI	RAATTY	2 cut(s)	941, 978
XceI	RCATGY	1 cut(s)	1696
XcmI	CCANNNNNNNNNTGG	1 cut(s)	239
XmiI	GTMKAC	1 cut(s)	766
XmnI	GAANNNNTTC	1 cut(s)	1789
XspI	CTAG	4 cut(s)	57, 300, 458, 1293
Zsp2I	ATGCAT	1 cut(s)	1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.