Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004113

Physical Location & Seq

Genomic Coordinates Forward (+)

30311527 .. 30314450

Gene Structure 2924 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G80640.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGTGTCTCCTTCGTCATTTGCTACCCATTTGGGTTCTTCTTGGTTTCTTCTTCTTCTCCACTGCTACTAAATCACAAGAATCTTCCGTTGTCTACGTTTCTGGTGCTTCCCCCGAAATCCCCATTTCTCAGGCTTCTCCACGAATGGGAGCTCAATCCCCAGGACCTCCCATTGTTAAAGTGGTGCTTCGCCAGGACTTGAACAAGAAGATTCTAATTGCTCTTATAGTCTCATCATCTCTGCTCTGTGTCACAGTCATGTTCCTTGTGTATCTCTTGCTATGGAGGTACAGGAATATGAAGAACAGCTTCACCGGTATCAAACGCAAATCCGATTCGGTGAAGAGTGTAACCACGAAACCGACTGTACACAAGATTGATTCTGTGAGGAAAGGAACCATCCCTGTGTATGAATATCAATTGCTGGAATCTGCAACAAACAAGTTTAGTGATAGTAATGTGTTGAGCCGAGGTGGTCGTGGATGCCTTTACAGAGCTTGTCTCGATGAAAAATCCTCAGTCACTGTGAAGAAACTTGATGGCGGTGGGGAGACAGACATTGAAAAACAGTTTGAGACTGAAGTAGATTGGTTGGCTAAGATCAGGCATCAGAACATAGTTTCCTTATTGGGGTTTTGCGTATATCGGCAAACGAGTTGTATTGTGTATGAGTTGATGCAGAATGGATCTTTGGAGAGTCAGTTACATGGGCCTAGTCAAGGTTCAGGTTTAACTTGGCAGCTCAGGATGAAGATAGCGGTTGATATAGCGAGAGGATTAGAGTATCTTCACGAGCATTGCCATCCTCCTGTAGTTCACAGAGATTTGAAATCATCTAGCATCCTTCTGGACTCCGATTTCAATGCAAAGATATCCGATTTTGGGTTTGCCACGGTTTTGACCACGCAGAATAAAAACCTGATACACAAGGCTTCTGAGGATCTTCTTGATGGGAAAGTTACAGACAAGAATGATGTCTACTCATTTGGAGTGATCCTGCTCGAACTTCTCCTCGGGAAGAAATCAGTGGAGAAACCGTCTTCTGAACCAGAATCCATCGTTACTTGGGCAGTACCTAAGCTGAGTGATAGAGCTAATCTACCAAACATATTGGATCCTGCAATCAAAGGAACCATGGATTTGAAGCATCTATATCAGGTAGCTGCGGTGGCGGTGTTGTGTGTACAGCCGGAGCCAAGTTACAGACCACTTATAACCGATGTCTTGCACTCACTCATCCCTCTTCTACCAGTAGAACTCGGTGGATCATTGCGGATTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

427

Amino Acids

47.37

Weight (kDa)

8.84

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	152 - 345	2.2e-33	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	153 - 344	5.9e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80640 AT1G80640
fragaria_vesca	FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910
malus_domestica	MD17G1219900.v1.1
prunus_persica	Prupe.3G095600_v2.0.a1
pyrus_communis	pycom17g22480
rosa_chinensis	RchiOBHm_Chr2g0133481 RchiOBHm_Chr7g0190981 RchiOBHm_Chr7g0202421 RchiOBHm_Chr7g0239591
rosa_laevigata	RLG00000019341
rosa_multiflora	Rmu_sc0001118.1_g000006 Rmu_sc0003605.1_g000031 Rmu_sc0005071.1_g000009 Rmu_sc0016125.1_g000002 Rmu_sc0017323.1_g000011
rosa_roxburghii	Rroxscaffold_2G00111050 Rroxscaffold_6G00388930
rosa_rugosa	Rorug02G0312100 Rorug02G0312200
rosa_samantha	Rh2BG370600 Rh2CG348100 Rh2DG387500
rosa_wichuraiana	Rw2G029740 Rw6G011840 Rw6G012150 Rw7G026990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1214, 1282
AccI	GTMKAC	2 cut(s)	93, 978
AciI	CCGC	5 cut(s)	543, 758, 1166, 1172, 1273
AclWI	GGATC	6 cut(s)	694, 948, 988, 1109, 1122, 1273
AcuI	CTGAAG	1 cut(s)	600
AfaI	GTAC	4 cut(s)	290, 369, 1074, 1185
AfiI	CCNNNNNNNGG	4 cut(s)	146, 630, 719, 882
AgeI	ACCGGT	1 cut(s)	314
AgsI	TTSAA	5 cut(s)	202, 563, 829, 862, 1144
AjnI	CCWGG	2 cut(s)	160, 192
AjuI	GAANNNNNNNTTGG	2 cut(s)	674, 706
AloI	GAACNNNNNNTCC	2 cut(s)	605, 637
AluBI	AGCT	7 cut(s)	152, 309, 497, 742, 1081, 1094, 1163
AluI	AGCT	7 cut(s)	152, 309, 497, 742, 1081, 1094, 1163
Alw21I	GWGCWC	1 cut(s)	154
Alw26I	GTCTC	5 cut(s)	11, 235, 506, 545, 569
AlwI	GGATC	6 cut(s)	694, 948, 988, 1109, 1122, 1273
AlwNI	CAGNNNCTG	1 cut(s)	524
Ama87I	CYCGRG	1 cut(s)	1013
AoxI	GGCC	1 cut(s)	710
ApeKI	GCWGC	2 cut(s)	739, 1163
AsiGI	ACCGGT	1 cut(s)	314
Asp700I	GAANNNNTTC	1 cut(s)	308
AspS9I	GGNCC	2 cut(s)	164, 710
AsuHPI	GGTGA	2 cut(s)	304, 352
AvaI	CYCGRG	1 cut(s)	1013
AvaII	GGWCC	1 cut(s)	164
BamHI	GGATCC	1 cut(s)	1114
BanII	GRGCYC	1 cut(s)	154
BauI	CACGAG	1 cut(s)	791
BbsI	GAAGAC	1 cut(s)	1032
Bbv12I	GWGCWC	1 cut(s)	154
BbvI	GCAGC	2 cut(s)	751, 1150
BccI	CCATC	5 cut(s)	407, 533, 810, 944, 1064
BcgI	CGANNNNNNTGC	2 cut(s)	845, 879
BciT130I	CCWGG	2 cut(s)	162, 194
BcoDI	GTCTC	5 cut(s)	11, 235, 506, 545, 569
BfaI	CTAG	2 cut(s)	714, 837
BfmI	CTRYAG	1 cut(s)	810
BisI	GCNGC	2 cut(s)	740, 1164
BlsI	GCNGC	2 cut(s)	741, 1165
Bme1390I	CCNGG	2 cut(s)	162, 194
Bme18I	GGWCC	1 cut(s)	164
BmeT110I	CYCGRG	1 cut(s)	1013
BmgT120I	GGNCC	2 cut(s)	164, 710
BmiI	GGNNCC	4 cut(s)	397, 1116, 1132, 1194
BmrFI	CCNGG	2 cut(s)	162, 194
BmsI	GCATC	5 cut(s)	473, 616, 666, 849, 1156
BpiI	GAAGAC	1 cut(s)	1032
BplI	GAGNNNNNCTC	2 cut(s)	486, 518
Bpu10I	CCTNAGC	2 cut(s)	743, 1077
BsaJI	CCNNGG	5 cut(s)	160, 469, 891, 1012, 1134
BsaWI	WCCGGW	1 cut(s)	314
BsaXI	ACNNNNNCTCC	4 cut(s)	686, 716, 1022, 1052
Bsc4I	CCNNNNNNNGG	4 cut(s)	146, 630, 719, 882
Bse118I	RCCGGY	1 cut(s)	314
Bse1I	ACTGG	1 cut(s)	1250
Bse3DI	GCAATG	2 cut(s)	796, 1268
BseBI	CCWGG	2 cut(s)	162, 194
BseDI	CCNNGG	5 cut(s)	160, 469, 891, 1012, 1134
BseGI	GGATG	6 cut(s)	399, 488, 753, 802, 840, 1236
BseLI	CCNNNNNNNGG	4 cut(s)	146, 630, 719, 882
BseMI	GCAATG	2 cut(s)	796, 1268
BseMII	CTCAG	5 cut(s)	143, 531, 757, 927, 1073
BseNI	ACTGG	1 cut(s)	1250
BseRI	GAGGAG	1 cut(s)	1001
BseXI	GCAGC	2 cut(s)	751, 1150
BshFI	GGCC	1 cut(s)	712
BshTI	ACCGGT	1 cut(s)	314
BsiHKAI	GWGCWC	1 cut(s)	154
BsiHKCI	CYCGRG	1 cut(s)	1013
BsiSI	CCGG	2 cut(s)	315, 1190
BslI	CCNNNNNNNGG	4 cut(s)	146, 630, 719, 882
BsmAI	GTCTC	5 cut(s)	11, 235, 506, 545, 569
BsnI	GGCC	1 cut(s)	712
BsoBI	CYCGRG	1 cut(s)	1013
Bsp1286I	GDGCHC	1 cut(s)	154
Bsp1407I	TGTACA	2 cut(s)	367, 1183
Bsp143I	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
Bsp19I	CCATGG	1 cut(s)	1134
BspACI	CCGC	5 cut(s)	543, 758, 1166, 1172, 1273
BspANI	GGCC	1 cut(s)	712
BspCNI	CTCAG	5 cut(s)	142, 530, 756, 928, 1074
BspLI	GGNNCC	4 cut(s)	397, 1116, 1132, 1194
BspPI	GGATC	6 cut(s)	694, 948, 988, 1109, 1122, 1273
BsrDI	GCAATG	2 cut(s)	796, 1268
BsrFI	RCCGGY	1 cut(s)	314
BsrGI	TGTACA	2 cut(s)	367, 1183
BsrI	ACTGG	1 cut(s)	1250
BssAI	RCCGGY	1 cut(s)	314
BssECI	CCNNGG	5 cut(s)	160, 469, 891, 1012, 1134
BssMI	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
BssSI	CACGAG	1 cut(s)	791
BssT1I	CCWWGG	1 cut(s)	1134
Bst2BI	CACGAG	1 cut(s)	791
Bst2UI	CCWGG	2 cut(s)	162, 194
Bst4CI	ACNGT	6 cut(s)	256, 367, 526, 570, 895, 1038
Bst6I	CTCTTC	2 cut(s)	338, 1248
BstAUI	TGTACA	2 cut(s)	367, 1183
BstDEI	CTNAG	7 cut(s)	129, 517, 597, 743, 936, 1077, 1082
BstDSI	CCRYGG	2 cut(s)	891, 1134
BstENI	CCTNNNNNAGG	1 cut(s)	717
BstF5I	GGATG	6 cut(s)	399, 488, 753, 802, 840, 1236
BstKTI	GATC	6 cut(s)	603, 689, 943, 996, 1117, 1268
BstMAI	GTCTC	5 cut(s)	11, 235, 506, 545, 569
BstMBI	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
BstMWI	GCNNNNNNNGC	1 cut(s)	1169
BstNI	CCWGG	2 cut(s)	162, 194
BstSCI	CCNGG	2 cut(s)	160, 192
BstSFI	CTRYAG	1 cut(s)	810
BstV1I	GCAGC	2 cut(s)	751, 1150
BstV2I	GAAGAC	1 cut(s)	1032
BstX2I	RGATCY	3 cut(s)	686, 940, 1114
BstYI	RGATCY	3 cut(s)	686, 940, 1114
BsuRI	GGCC	1 cut(s)	712
BtgI	CCRYGG	2 cut(s)	891, 1134
BtsCI	GGATG	6 cut(s)	399, 488, 753, 802, 840, 1236
BtsI	GCAGTG	1 cut(s)	60
BtsIMutI	CAGTG	3 cut(s)	60, 522, 1032
CaiI	CAGNNNCTG	1 cut(s)	524
Cfr10I	RCCGGY	1 cut(s)	314
Cfr13I	GGNCC	2 cut(s)	164, 710
Csp6I	GTAC	4 cut(s)	289, 368, 1073, 1184
CspAI	ACCGGT	1 cut(s)	314
CviAII	CATG	3 cut(s)	259, 707, 1135
CviQI	GTAC	4 cut(s)	289, 368, 1073, 1184
DdeI	CTNAG	7 cut(s)	129, 517, 597, 743, 936, 1077, 1082
DpnI	GATC	6 cut(s)	602, 688, 942, 995, 1116, 1267
DpnII	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
Eam1104I	CTCTTC	2 cut(s)	338, 1248
EarI	CTCTTC	2 cut(s)	338, 1248
Ecl136II	GAGCTC	1 cut(s)	152
Eco130I	CCWWGG	1 cut(s)	1134
Eco24I	GRGCYC	1 cut(s)	154
Eco32I	GATATC	1 cut(s)	873
Eco47I	GGWCC	1 cut(s)	164
Eco53kI	GAGCTC	1 cut(s)	152
Eco57I	CTGAAG	1 cut(s)	600
Eco88I	CYCGRG	1 cut(s)	1013
EcoICRI	GAGCTC	1 cut(s)	152
EcoNI	CCTNNNNNAGG	1 cut(s)	717
EcoO109I	RGGNCCY	1 cut(s)	164
EcoRII	CCWGG	2 cut(s)	160, 192
EcoRV	GATATC	1 cut(s)	873
EcoT14I	CCWWGG	1 cut(s)	1134
EcoT38I	GRGCYC	1 cut(s)	154
ErhI	CCWWGG	1 cut(s)	1134
FaeI	CATG	3 cut(s)	262, 710, 1138
FalI	AAGNNNNNCTT	4 cut(s)	171, 203, 293, 325
FatI	CATG	3 cut(s)	258, 706, 1134
FblI	GTMKAC	2 cut(s)	93, 978
Fnu4HI	GCNGC	2 cut(s)	740, 1164
FokI	GGATG	6 cut(s)	386, 495, 760, 789, 827, 1223
FriOI	GRGCYC	1 cut(s)	154
Fsp4HI	GCNGC	2 cut(s)	740, 1164
FspBI	CTAG	2 cut(s)	714, 837
GluI	GCNGC	2 cut(s)	740, 1164
HaeIII	GGCC	1 cut(s)	712
HapII	CCGG	2 cut(s)	315, 1190
Hin1II	CATG	3 cut(s)	262, 710, 1138
HinfI	GANTC	8 cut(s)	80, 211, 335, 380, 428, 697, 851, 1052
HpaII	CCGG	2 cut(s)	315, 1190
HphI	GGTGA	2 cut(s)	304, 352
Hpy166II	GTNNAC	5 cut(s)	94, 370, 817, 979, 1184
Hpy188I	TCNGA	6 cut(s)	334, 612, 856, 877, 937, 1045
Hpy188III	TCNNGA	6 cut(s)	503, 745, 791, 848, 947, 1015
Hpy8I	GTNNAC	5 cut(s)	94, 370, 817, 979, 1184
HpyAV	CCTTC	2 cut(s)	20, 854
HpyCH4III	ACNGT	6 cut(s)	256, 367, 526, 570, 895, 1038
HpyCH4IV	ACGT	1 cut(s)	96
HpyCH4V	TGCA	5 cut(s)	434, 679, 866, 1121, 1228
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1169
HpyF3I	CTNAG	7 cut(s)	129, 517, 597, 743, 936, 1077, 1082
HpySE526I	ACGT	1 cut(s)	96
Hsp92II	CATG	3 cut(s)	262, 710, 1138
Kzo9I	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
LmnI	GCTCC	2 cut(s)	149, 1192
Lsp1109I	GCAGC	2 cut(s)	751, 1150
LweI	GCATC	5 cut(s)	473, 616, 666, 849, 1156
MaeI	CTAG	2 cut(s)	714, 837
MaeII	ACGT	1 cut(s)	96
MaeIII	GTNAC	7 cut(s)	250, 349, 520, 702, 958, 1060, 1199
MalI	GATC	6 cut(s)	602, 688, 942, 995, 1116, 1267
MboI	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
MfeI	CAATTG	1 cut(s)	419
MflI	RGATCY	3 cut(s)	686, 940, 1114
MhlI	GDGCHC	1 cut(s)	154
MluCI	AATT	2 cut(s)	216, 419
MlyI	GAGTC	2 cut(s)	706, 845
MroXI	GAANNNNTTC	1 cut(s)	308
MseI	TTAA	2 cut(s)	177, 731
MslI	CAYNNNNRTG	2 cut(s)	257, 404
MspI	CCGG	2 cut(s)	315, 1190
MspR9I	CCNGG	2 cut(s)	162, 194
MunI	CAATTG	1 cut(s)	419
MvaI	CCWGG	2 cut(s)	162, 194
MwoI	GCNNNNNNNGC	1 cut(s)	1169
NcoI	CCATGG	1 cut(s)	1134
NdeII	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
NlaIII	CATG	3 cut(s)	262, 710, 1138
NlaIV	GGNNCC	4 cut(s)	397, 1116, 1132, 1194
NmeAIII	GCCGAG	1 cut(s)	494
NmuCI	GTSAC	2 cut(s)	250, 520
PdmI	GAANNNNTTC	1 cut(s)	308
PfeI	GAWTC	6 cut(s)	80, 211, 335, 380, 428, 1052
PinAI	ACCGGT	1 cut(s)	314
PkrI	GCNGC	2 cut(s)	741, 1165
PleI	GAGTC	2 cut(s)	705, 845
PpsI	GAGTC	2 cut(s)	705, 845
PpuMI	RGGWCCY	1 cut(s)	164
PsiI	TTATAA	2 cut(s)	1214, 1282
Psp124BI	GAGCTC	1 cut(s)	154
Psp5II	RGGWCCY	1 cut(s)	164
Psp6I	CCWGG	2 cut(s)	160, 192
PspGI	CCWGG	2 cut(s)	160, 192
PspN4I	GGNNCC	4 cut(s)	397, 1116, 1132, 1194
PspPI	GGNCC	2 cut(s)	164, 710
PspPPI	RGGWCCY	1 cut(s)	164
PstNI	CAGNNNCTG	1 cut(s)	524
PsuI	RGATCY	3 cut(s)	686, 940, 1114
RsaI	GTAC	4 cut(s)	290, 369, 1074, 1185
RsaNI	GTAC	4 cut(s)	289, 368, 1073, 1184
RseI	CAYNNNNRTG	2 cut(s)	257, 404
SacI	GAGCTC	1 cut(s)	154
SaqAI	TTAA	2 cut(s)	177, 731
SatI	GCNGC	2 cut(s)	740, 1164
Sau3AI	GATC	6 cut(s)	600, 686, 940, 993, 1114, 1265
Sau96I	GGNCC	2 cut(s)	164, 710
SchI	GAGTC	2 cut(s)	706, 845
ScrFI	CCNGG	2 cut(s)	162, 194
SduI	GDGCHC	1 cut(s)	154
SfaNI	GCATC	5 cut(s)	473, 616, 666, 849, 1156
SfcI	CTRYAG	1 cut(s)	810
SinI	GGWCC	1 cut(s)	164
SmiMI	CAYNNNNRTG	2 cut(s)	257, 404
Sse9I	AATT	2 cut(s)	216, 419
SsiI	CCGC	5 cut(s)	543, 758, 1166, 1172, 1273
SspMI	CTAG	2 cut(s)	714, 837
SstI	GAGCTC	1 cut(s)	154
StyD4I	CCNGG	2 cut(s)	160, 192
StyI	CCWWGG	1 cut(s)	1134
TaaI	ACNGT	6 cut(s)	256, 367, 526, 570, 895, 1038
TaiI	ACGT	1 cut(s)	99
TaqI	TCGA	2 cut(s)	504, 1002
TasI	AATT	2 cut(s)	216, 419
TatI	WGTACW	2 cut(s)	367, 1183
TfiI	GAWTC	6 cut(s)	80, 211, 335, 380, 428, 1052
Tru1I	TTAA	2 cut(s)	177, 731
Tru9I	TTAA	2 cut(s)	177, 731
TscAI	CASTG	3 cut(s)	67, 529, 1032
TseFI	GTSAC	2 cut(s)	250, 520
TseI	GCWGC	2 cut(s)	739, 1163
Tsp45I	GTSAC	2 cut(s)	250, 520
TspDTI	ATGAA	4 cut(s)	314, 426, 522, 764
TspGWI	ACGGA	1 cut(s)	76
TspRI	CASTG	3 cut(s)	67, 529, 1032
VpaK11BI	GGWCC	1 cut(s)	164
XagI	CCTNNNNNAGG	1 cut(s)	717
XcmI	CCANNNNNNNNNTGG	1 cut(s)	178
XmiI	GTMKAC	2 cut(s)	93, 978
XmnI	GAANNNNTTC	1 cut(s)	308
XspI	CTAG	2 cut(s)	714, 837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.