RchiOBHm_Chr7g0239591

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
65207273 .. 65208555
1283 bp
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UTR
Exon/CDS
Intron
PRQ21473

Sequence Viewer

Length: 456 bp
ATGGTTGAATTTAATTCCTTGATGTTGGAGAATAGAAAGGGTTCGGTTGTTGTAGTCAATTATCAATTGCTGGAAGCTGCAACAAACAAGTTCAGTGAAAGTAATATTTTGGGTGAGGGTAGTTCTGGACCTGTTTACAAGGCTAGTTTTGATGGAAAATTCATTGCAGCTGTTAAGAAAGTAAACGGCATAAGACAGGATGCTGAAAGAGAATTTGAGAATGAGGTGAACTGGTTGGGAAAAATTCGGCATCAAAACATCATCAAACTTTTGGGTTACTGTGTTCATGGAAAAACAAGGTTTCTTGTGTATGAAATGATGCAGAATGGCTCCTTACAAACTCAATTGTATGGTATGAACTTTCTATTGGTATCAAGTAACATAGATGGAGAAAGACATTTGCAAATGGCACAAGAAGGTTTTGTTGATGCGAAAAGATATTATATCAGCTTTTGA

Protein Analysis

151

Amino Acids

17.2

Weight (kDa)

7.83

Isoelectric Point (pI)

26.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 32 - 116 9.4e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 35 - 135 7.6e-15 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 4 cut(s) 8, 158, 212, 243
AgsI TTSAA 1 cut(s) 8
AjuI GAANNNNNNNTTGG 2 cut(s) 350, 382
AluBI AGCT 3 cut(s) 77, 170, 450
AluI AGCT 3 cut(s) 77, 170, 450
ApeKI GCWGC 2 cut(s) 77, 167
ApoI RAATTY 4 cut(s) 8, 158, 212, 243
Asp700I GAANNNNTTC 1 cut(s) 40
AspS9I GGNCC 1 cut(s) 128
AsuHPI GGTGA 2 cut(s) 125, 238
AvaII GGWCC 1 cut(s) 128
BbvI GCAGC 2 cut(s) 64, 179
BccI CCATC 2 cut(s) 146, 380
BceAI ACGGC 1 cut(s) 202
BfaI CTAG 1 cut(s) 144
BisI GCNGC 2 cut(s) 78, 168
BlsI GCNGC 2 cut(s) 79, 169
Bme18I GGWCC 1 cut(s) 128
BmgT120I GGNCC 1 cut(s) 128
BmiI GGNNCC 1 cut(s) 331
BmsI GCATC 4 cut(s) 190, 259, 309, 418
Bse1I ACTGG 1 cut(s) 236
Bse3DI GCAATG 1 cut(s) 162
BseGI GGATG 1 cut(s) 205
BseMI GCAATG 1 cut(s) 162
BseNI ACTGG 1 cut(s) 236
BseXI GCAGC 2 cut(s) 64, 179
BspLI GGNNCC 1 cut(s) 331
BsrDI GCAATG 1 cut(s) 162
BsrI ACTGG 1 cut(s) 236
Bst4CI ACNGT 1 cut(s) 281
BstF5I GGATG 1 cut(s) 205
BstV1I GCAGC 2 cut(s) 64, 179
BtsCI GGATG 1 cut(s) 205
BtsIMutI CAGTG 1 cut(s) 100
Cfr13I GGNCC 1 cut(s) 128
CviAII CATG 1 cut(s) 287
CviJI RGCY 5 cut(s) 77, 143, 170, 330, 450
CviKI_1 RGCY 5 cut(s) 77, 143, 170, 330, 450
Eco47I GGWCC 1 cut(s) 128
FaeI CATG 1 cut(s) 290
FaiI YATR 7 cut(s) 191, 288, 312, 351, 356, 383, 444
FatI CATG 1 cut(s) 286
Fnu4HI GCNGC 2 cut(s) 78, 168
FokI GGATG 1 cut(s) 212
Fsp4HI GCNGC 2 cut(s) 78, 168
FspBI CTAG 1 cut(s) 144
GluI GCNGC 2 cut(s) 78, 168
Hin1II CATG 1 cut(s) 290
HphI GGTGA 2 cut(s) 125, 238
Hpy166II GTNNAC 3 cut(s) 136, 184, 229
Hpy188III TCNNGA 1 cut(s) 126
Hpy8I GTNNAC 3 cut(s) 136, 184, 229
HpyAV CCTTC 1 cut(s) 410
HpyCH4III ACNGT 1 cut(s) 281
HpyCH4V TGCA 4 cut(s) 80, 167, 322, 403
Hsp92II CATG 1 cut(s) 290
LmnI GCTCC 1 cut(s) 335
LpnPI CCDG 5 cut(s) 56, 111, 144, 182, 217
Lsp1109I GCAGC 2 cut(s) 64, 179
LweI GCATC 4 cut(s) 190, 259, 309, 418
MaeI CTAG 1 cut(s) 144
MaeIII GTNAC 2 cut(s) 275, 377
MfeI CAATTG 2 cut(s) 65, 344
MluCI AATT 8 cut(s) 8, 13, 58, 65, 158, 212, 243, 344
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 2 cut(s) 109, 217
MroXI GAANNNNTTC 1 cut(s) 40
MseI TTAA 2 cut(s) 12, 174
MspA1I CMGCKG 1 cut(s) 170
MunI CAATTG 2 cut(s) 65, 344
NlaIII CATG 1 cut(s) 290
NlaIV GGNNCC 1 cut(s) 331
PdmI GAANNNNTTC 1 cut(s) 40
PkrI GCNGC 2 cut(s) 79, 169
PspN4I GGNNCC 1 cut(s) 331
PspPI GGNCC 1 cut(s) 128
PvuII CAGCTG 1 cut(s) 170
SaqAI TTAA 2 cut(s) 12, 174
SatI GCNGC 2 cut(s) 78, 168
Sau96I GGNCC 1 cut(s) 128
SetI ASST 7 cut(s) 79, 133, 172, 228, 302, 421, 452
SfaNI GCATC 4 cut(s) 190, 259, 309, 418
SinI GGWCC 1 cut(s) 128
Sse9I AATT 8 cut(s) 8, 13, 58, 65, 158, 212, 243, 344
SspI AATATT 1 cut(s) 106
SspMI CTAG 1 cut(s) 144
TaaI ACNGT 1 cut(s) 281
TasI AATT 8 cut(s) 8, 13, 58, 65, 158, 212, 243, 344
Tru1I TTAA 2 cut(s) 12, 174
Tru9I TTAA 2 cut(s) 12, 174
TscAI CASTG 1 cut(s) 100
TseI GCWGC 2 cut(s) 77, 167
TspDTI ATGAA 4 cut(s) 151, 275, 327, 371
TspRI CASTG 1 cut(s) 100
VpaK11BI GGWCC 1 cut(s) 128
XapI RAATTY 4 cut(s) 8, 158, 212, 243
XmnI GAANNNNTTC 1 cut(s) 40
XspI CTAG 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.