Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004113

Physical Location & Seq

Genomic Coordinates Forward (+)

7170453 .. 7174826

Gene Structure 4374 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G095600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGAATCTTGCTCTTCTGTTAATATCCATGTGGGTGTCAACCACCAGTTTGTTGGTAACCATAATTGAAGCCAGAGCAGAGCCAACAAGTTCCACCATTTCTGGTCACATTATCCTTTTTGAGGAAGAACCCATCACTCAGTTTTCTGCAAAAATGGAAGCTCAATCTCCAGGATTGCCTGAGGTTAGAGTAGTTCACCATCAAGATTTGAACAAGAGAATTCTTATAGCACTCATTGTTGCTTCCACACTCCTTGGAGGAATCTTGCTGTTCCTGTCATGTTTTTGGATCTATAGACAGAAAACCTTGAAACATTCCAATGGGAAAAAGGGAAAGCCAATTGAGACTGCAAAGGGGATGCAATTCAATCCAATGACGGTTGAATTTAATACCTTGCGAATGGGGAGTAGGAAGGGTTCAGTTGCAGTATTCAATTATCAATCGCTTGAAGATGCAACAAACAATTTCAACGAAAGTAATATTTTGAGTGAGGATGGTTCTGGACTTCTTTACAGAGCTAGTTTTGATGACAAACTTATTGCAGCTGTTAAGAAAGTAAATAGTGAAGGTCCGGATTCTGATAGAGAATTTAAAAATGAGGTGAACTTGTTGAGCAAAATCAAGCATCAAAACATCATTAGACTTTTGGGTTACTGCATTCACAGCGAAGCAAGGTTTCTTGTTTATGACATGATGCAGAATGGGTCCTTAGAAACTCAGTTATGTGGACCTAATCATGGGTCAGCGTTGACTTGGCATCTACGGTTGAAAATCGCTGTTGATGTTTCCAGGGGATTGGAATATCTTCATGAGCACTGTAATCCCCCTGTGGTCCATAGGGGCCTAAAATCGTCTAACATTCTTCTGGATTCAAATTTTAGTGCTAAGCTTTCAGATTTTGGTCTTGCTGTAACTGCTGGGATGAAGGATAAGGACAACATAAAGCTGTCAGGAACTTTGGATTATGTAGCACCAGAGTACATTTTGGATGGTCAGTTAACTGATAAAAGTGATGTCTATGCTTTTGGAGTTGTCCTTTTGGAGCTCTTGATGGGAAGAAAATCGGTGGAAAATAAAGCCGGAGCTGAAAGCCAATCCATAGTCACATGGGCCATGCCCCAGCTCACTGATAGATCAAGGCTTCCAAACATTGTGGATTGTGTGATAAAAGATACTATGGATTTAAAACATCTGTACCAGGTCGCTGCTGTGGCAGTACTATGTGTACAACCTGAACCGAGTTACAGGCCATTGATAACAGATGTTCTGCACTCACTAATCCCTCTCGTCCCTATCGAGCTTGGAGGGTCGCTGAGGATTGCAGACTGTGTACCCTCAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

448

Amino Acids

49.42

Weight (kDa)

6.36

Isoelectric Point (pI)

35.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80640 AT1G80640
fragaria_vesca	FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910 FvH4_6g28910
malus_domestica	MD17G1219900.v1.1
prunus_persica	Prupe.3G095600_v2.0.a1
pyrus_communis	pycom17g22480
rosa_chinensis	RchiOBHm_Chr2g0133481 RchiOBHm_Chr7g0190981 RchiOBHm_Chr7g0202421 RchiOBHm_Chr7g0239591
rosa_laevigata	RLG00000019341
rosa_multiflora	Rmu_sc0001118.1_g000006 Rmu_sc0003605.1_g000031 Rmu_sc0005071.1_g000009 Rmu_sc0016125.1_g000002 Rmu_sc0017323.1_g000011
rosa_roxburghii	Rroxscaffold_2G00111050 Rroxscaffold_6G00388930
rosa_rugosa	Rorug02G0312100 Rorug02G0312200
rosa_samantha	Rh2BG370600 Rh2CG348100 Rh2DG387500
rosa_wichuraiana	Rw2G029740 Rw6G011840 Rw6G012150 Rw7G026990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	571
AclWI	GGATC	1 cut(s)	296
AcsI	RAATTY	4 cut(s)	219, 383, 587, 874
AfaI	GTAC	5 cut(s)	980, 1196, 1218, 1227, 1332
AfiI	CCNNNNNNNGG	2 cut(s)	121, 737
AjnI	CCWGG	3 cut(s)	169, 788, 1197
AluBI	AGCT	9 cut(s)	161, 518, 545, 889, 946, 1045, 1085, 1123, 1300
AluI	AGCT	9 cut(s)	161, 518, 545, 889, 946, 1045, 1085, 1123, 1300
Alw21I	GWGCWC	2 cut(s)	816, 1047
Alw26I	GTCTC	1 cut(s)	338
AlwI	GGATC	1 cut(s)	296
Aor13HI	TCCGGA	1 cut(s)	571
AoxI	GGCC	3 cut(s)	841, 1110, 1247
ApeKI	GCWGC	2 cut(s)	542, 1205
ApoI	RAATTY	4 cut(s)	219, 383, 587, 874
Asp700I	GAANNNNTTC	1 cut(s)	804
AspS9I	GGNCC	6 cut(s)	569, 705, 728, 832, 841, 1110
AsuHPI	GGTGA	2 cut(s)	188, 613
AvaII	GGWCC	4 cut(s)	569, 705, 728, 832
AxyI	CCTNAGG	1 cut(s)	180
BaeI	ACNNNNGTAYC	2 cut(s)	1178, 1211
BanII	GRGCYC	1 cut(s)	1047
Bbv12I	GWGCWC	2 cut(s)	816, 1047
BbvCI	CCTCAGC	2 cut(s)	1313, 1336
BbvI	GCAGC	2 cut(s)	554, 1192
BccI	CCATC	5 cut(s)	140, 207, 488, 983, 1045
BciT130I	CCWGG	3 cut(s)	171, 790, 1199
BcoDI	GTCTC	1 cut(s)	338
BfaI	CTAG	1 cut(s)	519
BfmI	CTRYAG	1 cut(s)	292
BisI	GCNGC	2 cut(s)	543, 1206
BlpI	GCTNAGC	1 cut(s)	885
BlsI	GCNGC	2 cut(s)	544, 1207
BmcAI	AGTACT	1 cut(s)	1218
Bme1390I	CCNGG	3 cut(s)	171, 790, 1199
Bme18I	GGWCC	4 cut(s)	569, 705, 728, 832
BmgT120I	GGNCC	6 cut(s)	569, 705, 728, 832, 841, 1110
BmiI	GGNNCC	2 cut(s)	706, 842
BmrFI	CCNGG	3 cut(s)	171, 790, 1199
BmsI	GCATC	5 cut(s)	348, 442, 634, 684, 766
BpmI	CTGGAG	1 cut(s)	153
Bpu10I	CCTNAGC	2 cut(s)	1313, 1336
Bpu1102I	GCTNAGC	1 cut(s)	885
BsaJI	CCNNGG	2 cut(s)	253, 789
BsaWI	WCCGGW	1 cut(s)	571
Bsc4I	CCNNNNNNNGG	2 cut(s)	121, 737
Bse1I	ACTGG	1 cut(s)	45
Bse21I	CCTNAGG	1 cut(s)	180
BseAI	TCCGGA	1 cut(s)	571
BseBI	CCWGG	3 cut(s)	171, 790, 1199
BseDI	CCNNGG	2 cut(s)	253, 789
BseGI	GGATG	4 cut(s)	363, 499, 927, 994
BseLI	CCNNNNNNNGG	2 cut(s)	121, 737
BseMII	CTCAG	4 cut(s)	152, 171, 731, 1304
BseNI	ACTGG	1 cut(s)	45
BseXI	GCAGC	2 cut(s)	554, 1192
BseYI	CCCAGC	2 cut(s)	917, 1119
BsgI	GTGCAG	1 cut(s)	1253
BshFI	GGCC	3 cut(s)	843, 1112, 1249
BsiHKAI	GWGCWC	2 cut(s)	816, 1047
BsiSI	CCGG	2 cut(s)	572, 1080
BslFI	GGGAC	1 cut(s)	1274
BslI	CCNNNNNNNGG	2 cut(s)	121, 737
BsmAI	GTCTC	1 cut(s)	338
BsmFI	GGGAC	1 cut(s)	1274
BsmI	GAATGC	1 cut(s)	657
BsnI	GGCC	3 cut(s)	843, 1112, 1249
Bsp1286I	GDGCHC	2 cut(s)	816, 1047
Bsp13I	TCCGGA	1 cut(s)	571
Bsp1407I	TGTACA	1 cut(s)	1225
Bsp143I	GATC	2 cut(s)	288, 1133
Bsp1720I	GCTNAGC	1 cut(s)	885
BspANI	GGCC	3 cut(s)	843, 1112, 1249
BspCNI	CTCAG	4 cut(s)	151, 172, 730, 1305
BspEI	TCCGGA	1 cut(s)	571
BspHI	TCATGA	1 cut(s)	808
BspLI	GGNNCC	2 cut(s)	706, 842
BspPI	GGATC	1 cut(s)	296
BspQI	GCTCTTC	1 cut(s)	18
BsrGI	TGTACA	1 cut(s)	1225
BsrI	ACTGG	1 cut(s)	45
BssECI	CCNNGG	2 cut(s)	253, 789
BssMI	GATC	2 cut(s)	288, 1133
BssT1I	CCWWGG	1 cut(s)	253
Bst2UI	CCWGG	3 cut(s)	171, 790, 1199
Bst4CI	ACNGT	4 cut(s)	379, 765, 818, 1328
Bst6I	CTCTTC	1 cut(s)	18
BstAUI	TGTACA	1 cut(s)	1225
BstDEI	CTNAG	7 cut(s)	138, 180, 709, 717, 885, 1313, 1336
BstEII	GGTNACC	1 cut(s)	55
BstENI	CCTNNNNNAGG	1 cut(s)	119
BstF5I	GGATG	4 cut(s)	363, 499, 927, 994
BstKTI	GATC	2 cut(s)	291, 1136
BstMAI	GTCTC	1 cut(s)	338
BstMBI	GATC	2 cut(s)	288, 1133
BstMWI	GCNNNNNNNGC	3 cut(s)	663, 914, 1211
BstNI	CCWGG	3 cut(s)	171, 790, 1199
BstPI	GGTNACC	1 cut(s)	55
BstSCI	CCNGG	3 cut(s)	169, 788, 1197
BstSFI	CTRYAG	1 cut(s)	292
BstV1I	GCAGC	2 cut(s)	554, 1192
BstX2I	RGATCY	1 cut(s)	288
BstXI	CCANNNNNNTGG	2 cut(s)	52, 796
BstYI	RGATCY	1 cut(s)	288
Bsu36I	CCTNAGG	1 cut(s)	180
BsuRI	GGCC	3 cut(s)	843, 1112, 1249
BtsCI	GGATG	4 cut(s)	363, 499, 927, 994
BtsIMutI	CAGTG	2 cut(s)	814, 1125
CciI	TCATGA	1 cut(s)	808
Cfr13I	GGNCC	6 cut(s)	569, 705, 728, 832, 841, 1110
CsiI	ACCWGGT	1 cut(s)	1197
Csp6I	GTAC	5 cut(s)	979, 1195, 1217, 1226, 1331
CspCI	CAANNNNNGTGG	4 cut(s)	235, 270, 1134, 1169
CviAII	CATG	7 cut(s)	28, 279, 691, 737, 809, 1107, 1114
CviQI	GTAC	5 cut(s)	979, 1195, 1217, 1226, 1331
DdeI	CTNAG	7 cut(s)	138, 180, 709, 717, 885, 1313, 1336
DpnI	GATC	2 cut(s)	290, 1135
DpnII	GATC	2 cut(s)	288, 1133
DraI	TTTAAA	2 cut(s)	592, 1185
Eam1104I	CTCTTC	1 cut(s)	18
EarI	CTCTTC	1 cut(s)	18
Ecl136II	GAGCTC	1 cut(s)	1045
Eco130I	CCWWGG	1 cut(s)	253
Eco24I	GRGCYC	1 cut(s)	1047
Eco47I	GGWCC	4 cut(s)	569, 705, 728, 832
Eco53kI	GAGCTC	1 cut(s)	1045
Eco81I	CCTNAGG	1 cut(s)	180
Eco91I	GGTNACC	1 cut(s)	55
EcoICRI	GAGCTC	1 cut(s)	1045
EcoNI	CCTNNNNNAGG	1 cut(s)	119
EcoO109I	RGGNCCY	2 cut(s)	705, 841
EcoO65I	GGTNACC	1 cut(s)	55
EcoRI	GAATTC	1 cut(s)	219
EcoRII	CCWGG	3 cut(s)	169, 788, 1197
EcoT14I	CCWWGG	1 cut(s)	253
EcoT38I	GRGCYC	1 cut(s)	1047
ErhI	CCWWGG	1 cut(s)	253
FaeI	CATG	7 cut(s)	31, 282, 694, 740, 812, 1110, 1117
FaqI	GGGAC	1 cut(s)	1274
FatI	CATG	7 cut(s)	27, 278, 690, 736, 808, 1106, 1113
Fnu4HI	GCNGC	2 cut(s)	543, 1206
FokI	GGATG	4 cut(s)	370, 506, 934, 1001
FriOI	GRGCYC	1 cut(s)	1047
Fsp4HI	GCNGC	2 cut(s)	543, 1206
FspBI	CTAG	1 cut(s)	519
GluI	GCNGC	2 cut(s)	543, 1206
GsaI	CCCAGC	2 cut(s)	921, 1123
GsuI	CTGGAG	1 cut(s)	153
HaeIII	GGCC	3 cut(s)	843, 1112, 1249
HapII	CCGG	2 cut(s)	572, 1080
Hin1II	CATG	7 cut(s)	31, 282, 694, 740, 812, 1110, 1117
HincII	GTYRAC	3 cut(s)	39, 750, 999
HindII	GTYRAC	3 cut(s)	39, 750, 999
HindIII	AAGCTT	1 cut(s)	887
HinfI	GANTC	4 cut(s)	4, 261, 575, 869
HpaI	GTTAAC	1 cut(s)	999
HpaII	CCGG	2 cut(s)	572, 1080
HphI	GGTGA	2 cut(s)	188, 613
Hpy166II	GTNNAC	8 cut(s)	39, 196, 604, 728, 750, 999, 1226, 1331
Hpy188I	TCNGA	2 cut(s)	580, 895
Hpy188III	TCNNGA	7 cut(s)	203, 501, 572, 809, 866, 951, 1048
Hpy8I	GTNNAC	8 cut(s)	39, 196, 604, 728, 750, 999, 1226, 1331
HpyAV	CCTTC	3 cut(s)	406, 560, 919
HpyCH4III	ACNGT	4 cut(s)	379, 765, 818, 1328
HpyF10VI	GCNNNNNNNGC	3 cut(s)	663, 914, 1211
HpyF3I	CTNAG	7 cut(s)	138, 180, 709, 717, 885, 1313, 1336
Hsp92II	CATG	7 cut(s)	31, 282, 694, 740, 812, 1110, 1117
Kpn2I	TCCGGA	1 cut(s)	571
KspAI	GTTAAC	1 cut(s)	999
Kzo9I	GATC	2 cut(s)	288, 1133
LguI	GCTCTTC	1 cut(s)	18
LmnI	GCTCC	2 cut(s)	1042, 1082
Lsp1109I	GCAGC	2 cut(s)	554, 1192
LweI	GCATC	5 cut(s)	348, 442, 634, 684, 766
MabI	ACCWGGT	1 cut(s)	1197
MaeI	CTAG	1 cut(s)	519
MaeIII	GTNAC	6 cut(s)	55, 104, 650, 910, 1102, 1241
MalI	GATC	2 cut(s)	290, 1135
MboI	GATC	2 cut(s)	288, 1133
MboII	GAAGA	6 cut(s)	5, 137, 461, 797, 854, 1068
MfeI	CAATTG	1 cut(s)	339
MflI	RGATCY	1 cut(s)	288
MhlI	GDGCHC	2 cut(s)	816, 1047
MluCI	AATT	9 cut(s)	63, 219, 339, 362, 383, 433, 463, 587, 874
MnlI	CCTC	8 cut(s)	115, 175, 251, 484, 592, 1293, 1298, 1308
MroI	TCCGGA	1 cut(s)	571
MroXI	GAANNNNTTC	1 cut(s)	804
MseI	TTAA	6 cut(s)	20, 387, 549, 591, 998, 1184
MslI	CAYNNNNRTG	2 cut(s)	32, 318
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	2 cut(s)	572, 1080
MspR9I	CCNGG	3 cut(s)	171, 790, 1199
MunI	CAATTG	1 cut(s)	339
Mva1269I	GAATGC	1 cut(s)	657
MvaI	CCWGG	3 cut(s)	171, 790, 1199
MwoI	GCNNNNNNNGC	3 cut(s)	663, 914, 1211
NdeII	GATC	2 cut(s)	288, 1133
NlaIII	CATG	7 cut(s)	31, 282, 694, 740, 812, 1110, 1117
NlaIV	GGNNCC	2 cut(s)	706, 842
NmuCI	GTSAC	2 cut(s)	104, 1102
PagI	TCATGA	1 cut(s)	808
PciSI	GCTCTTC	1 cut(s)	18
PcsI	WCGNNNNNNNCGW	1 cut(s)	1293
PctI	GAATGC	1 cut(s)	657
PdmI	GAANNNNTTC	1 cut(s)	804
PfeI	GAWTC	4 cut(s)	4, 261, 575, 869
PfoI	TCCNGGA	1 cut(s)	169
PkrI	GCNGC	2 cut(s)	544, 1207
PpuMI	RGGWCCY	1 cut(s)	705
Psp124BI	GAGCTC	1 cut(s)	1047
Psp5II	RGGWCCY	1 cut(s)	705
Psp6I	CCWGG	3 cut(s)	169, 788, 1197
PspEI	GGTNACC	1 cut(s)	55
PspFI	CCCAGC	2 cut(s)	917, 1119
PspGI	CCWGG	3 cut(s)	169, 788, 1197
PspN4I	GGNNCC	2 cut(s)	706, 842
PspPI	GGNCC	6 cut(s)	569, 705, 728, 832, 841, 1110
PspPPI	RGGWCCY	1 cut(s)	705
PsrI	GAACNNNNNNTAC	2 cut(s)	400, 432
PsuI	RGATCY	1 cut(s)	288
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	5 cut(s)	980, 1196, 1218, 1227, 1332
RsaNI	GTAC	5 cut(s)	979, 1195, 1217, 1226, 1331
RseI	CAYNNNNRTG	2 cut(s)	32, 318
SacI	GAGCTC	1 cut(s)	1047
SapI	GCTCTTC	1 cut(s)	18
SaqAI	TTAA	6 cut(s)	20, 387, 549, 591, 998, 1184
SatI	GCNGC	2 cut(s)	543, 1206
Sau3AI	GATC	2 cut(s)	288, 1133
Sau96I	GGNCC	6 cut(s)	569, 705, 728, 832, 841, 1110
ScaI	AGTACT	1 cut(s)	1218
ScrFI	CCNGG	3 cut(s)	171, 790, 1199
SduI	GDGCHC	2 cut(s)	816, 1047
SexAI	ACCWGGT	1 cut(s)	1197
SfaNI	GCATC	5 cut(s)	348, 442, 634, 684, 766
SfcI	CTRYAG	1 cut(s)	292
SinI	GGWCC	4 cut(s)	569, 705, 728, 832
SmiMI	CAYNNNNRTG	2 cut(s)	32, 318
Sse9I	AATT	9 cut(s)	63, 219, 339, 362, 383, 433, 463, 587, 874
SspI	AATATT	1 cut(s)	481
SspMI	CTAG	1 cut(s)	519
SstI	GAGCTC	1 cut(s)	1047
StyD4I	CCNGG	3 cut(s)	169, 788, 1197
StyI	CCWWGG	1 cut(s)	253
TaaI	ACNGT	4 cut(s)	379, 765, 818, 1328
TaqI	TCGA	1 cut(s)	1296
TasI	AATT	9 cut(s)	63, 219, 339, 362, 383, 433, 463, 587, 874
TatI	WGTACW	3 cut(s)	978, 1216, 1225
TfiI	GAWTC	4 cut(s)	4, 261, 575, 869
Tru1I	TTAA	6 cut(s)	20, 387, 549, 591, 998, 1184
Tru9I	TTAA	6 cut(s)	20, 387, 549, 591, 998, 1184
TscAI	CASTG	2 cut(s)	821, 1132
TseFI	GTSAC	2 cut(s)	104, 1102
TseI	GCWGC	2 cut(s)	542, 1205
Tsp45I	GTSAC	2 cut(s)	104, 1102
TspDTI	ATGAA	3 cut(s)	17, 797, 938
TspRI	CASTG	2 cut(s)	821, 1132
VpaK11BI	GGWCC	4 cut(s)	569, 705, 728, 832
XagI	CCTNNNNNAGG	1 cut(s)	119
XapI	RAATTY	4 cut(s)	219, 383, 587, 874
XcmI	CCANNNNNNNNNTGG	1 cut(s)	49
XmnI	GAANNNNTTC	1 cut(s)	804
XspI	CTAG	1 cut(s)	519
ZrmI	AGTACT	1 cut(s)	1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.