Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006557

Physical Location & Seq

Genomic Coordinates Reverse (-)

778345 .. 779786

Gene Structure 1442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G02770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGGAAGATTCCGGCATGAAATGTGTCTTTGTAACTACTAATATGGATACTCGTCTGGGCCTTCTCATGGACAAGGATGATACTGTATCTACATTCAAAGAGAAAATCTGCAAAGAGCATGAACAGTGTTTCCCTAGTTTTGGAAACATCACTATCTCCGCTTTGAAGGTTAACTGTTGCGGTCAACTTTATCATTTAGTTGATTCTCTGACTTTGAACACGGCTTTCCAAAGCAACGAATCGTTTCTTTTTGTTGATGTGCTGAGGGTTGAGGAGAAGGGTAAAATGCTGACTGGAGAAACTCCTTTGTCAAACCCTAGTTTACTTGAGAGAGAGACCAATGATCTGACTATTAAGGAAGCTCCGGTAACCCAAGCTGGTGATGATAAAACTAAAAAGAGGAAACTGAAAAGTTTGGATAGTACCAAAAGAAGTCATAAGAAACGATCTCTTGGGGATCAGTCAAGTGGAAAAGGAGAGGTTGAGTCTTTGGCAATGTCACCAACAGGAAAAGATCTTGAAAAGGGAGAAAAAAGTGCTGCTACGATTGACCAAGAGAATGATCTTGCACTTGTGGATGATGAGAACGAGAGTCATGAAGAAGATGTTCGTGTAGGAGCAATAGTAGAAGACATCAATCAATCTGCTGATGTTGAGAACGAAGGGCTCAACAAAGATGGTGTTGATGGAAAATATGCTGATGAGGCTACTACATCTGTGAAGGCTGCTAAGAAAGGAAGGACAAAGAAAGACAAGGCAGCCCCGACTAAAGAAGATACTGAAGTTGCTTCTAGCTCAAGGAACGTTGATCACGATGTTGTTATCAGAGAGCCGCAGGAGAATGTAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00770 map00770

Pfam Domains

Protein Families

ACPS

Protein Analysis

283

Amino Acids

31.06

Weight (kDa)

4.92

Isoelectric Point (pI)

34.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30060 AT1G30070 AT1G30070 AT2G01800 AT2G01800 AT2G01800 AT2G02770 AT4G00580 AT4G00580 AT4G00920
fragaria_vesca	FvH4_3g05510
malus_domestica	MD05G1283600.v1.1 MD10G1261800.v1.1
prunus_persica	Prupe.4G081000_v2.0.a1
pyrus_communis	pycom05g26270 pycom10g21810
rosa_chinensis	RchiOBHm_Chr5g0014231
rosa_laevigata	RLG00000032092
rosa_multiflora	Rmu_ssc0000120.1_g000005
rosa_roxburghii	Rroxscaffold_1G00062350
rosa_rugosa	Rorug05G0016300
rosa_samantha	Rh5AG110700 Rh5BG108000 Rh5CG119400 Rh5DG106100
rosa_wichuraiana	Rw5G009650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	159, 180, 833
AclI	AACGTT	1 cut(s)	804
AclWI	GGATC	1 cut(s)	465
AcuI	CTGAAG	1 cut(s)	801
AfaI	GTAC	1 cut(s)	424
AfiI	CCNNNNNNNGG	2 cut(s)	67, 140
AgsI	TTSAA	4 cut(s)	97, 166, 217, 521
AloI	GAACNNNNNNTCC	2 cut(s)	114, 146
AluBI	AGCT	3 cut(s)	362, 377, 795
AluI	AGCT	3 cut(s)	362, 377, 795
Alw26I	GTCTC	1 cut(s)	329
AlwI	GGATC	1 cut(s)	465
AoxI	GGCC	1 cut(s)	58
ApeKI	GCWGC	3 cut(s)	539, 725, 758
Asp700I	GAANNNNTTC	2 cut(s)	243, 606
AspS9I	GGNCC	1 cut(s)	58
AsuHPI	GGTGA	2 cut(s)	392, 492
BaeI	ACNNNNGTAYC	2 cut(s)	768, 801
BanII	GRGCYC	1 cut(s)	669
BbsI	GAAGAC	1 cut(s)	636
BbvCI	CCTCAGC	1 cut(s)	263
BbvI	GCAGC	3 cut(s)	526, 712, 770
BccI	CCATC	2 cut(s)	671, 680
BceAI	ACGGC	1 cut(s)	237
BciVI	GTATCC	1 cut(s)	40
BclI	TGATCA	1 cut(s)	808
BcoDI	GTCTC	1 cut(s)	329
BfaI	CTAG	3 cut(s)	135, 318, 792
BfuI	GTATCC	1 cut(s)	40
BglII	AGATCT	1 cut(s)	514
BisI	GCNGC	4 cut(s)	540, 726, 759, 833
BlsI	GCNGC	4 cut(s)	541, 727, 760, 834
BmgT120I	GGNCC	1 cut(s)	58
BpiI	GAAGAC	1 cut(s)	636
BpmI	CTGGAG	1 cut(s)	315
Bpu10I	CCTNAGC	1 cut(s)	263
BpuEI	CTTGAG	2 cut(s)	347, 781
BsaI	GGTCTC	1 cut(s)	329
BsaWI	WCCGGW	1 cut(s)	364
BsaXI	ACNNNNNCTCC	2 cut(s)	609, 639
Bsc4I	CCNNNNNNNGG	2 cut(s)	67, 140
Bse1I	ACTGG	1 cut(s)	298
Bse3DI	GCAATG	1 cut(s)	501
BseGI	GGATG	2 cut(s)	82, 583
BseLI	CCNNNNNNNGG	2 cut(s)	67, 140
BseMI	GCAATG	1 cut(s)	501
BseMII	CTCAG	1 cut(s)	254
BseNI	ACTGG	1 cut(s)	298
BseRI	GAGGAG	1 cut(s)	287
BseXI	GCAGC	3 cut(s)	526, 712, 770
BshFI	GGCC	1 cut(s)	60
BsiSI	CCGG	2 cut(s)	12, 365
BslI	CCNNNNNNNGG	2 cut(s)	67, 140
BsmAI	GTCTC	1 cut(s)	329
BsnI	GGCC	1 cut(s)	60
Bso31I	GGTCTC	1 cut(s)	329
Bsp1286I	GDGCHC	1 cut(s)	669
Bsp143I	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
BspACI	CCGC	3 cut(s)	159, 180, 833
BspANI	GGCC	1 cut(s)	60
BspCNI	CTCAG	1 cut(s)	255
BspHI	TCATGA	1 cut(s)	595
BspPI	GGATC	1 cut(s)	465
BspTNI	GGTCTC	1 cut(s)	329
BsrDI	GCAATG	1 cut(s)	501
BsrI	ACTGG	1 cut(s)	298
BssMI	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
Bst4CI	ACNGT	3 cut(s)	85, 126, 176
BstDEI	CTNAG	2 cut(s)	263, 729
BstEII	GGTNACC	1 cut(s)	367
BstF5I	GGATG	2 cut(s)	82, 583
BstKTI	GATC	6 cut(s)	346, 449, 460, 517, 565, 811
BstMAI	GTCTC	1 cut(s)	329
BstMBI	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
BstMWI	GCNNNNNNNGC	1 cut(s)	704
BstPI	GGTNACC	1 cut(s)	367
BstV1I	GCAGC	3 cut(s)	526, 712, 770
BstV2I	GAAGAC	1 cut(s)	636
BstX2I	RGATCY	1 cut(s)	514
BstYI	RGATCY	1 cut(s)	514
BsuI	GTATCC	1 cut(s)	40
BsuRI	GGCC	1 cut(s)	60
BtsCI	GGATG	2 cut(s)	82, 583
BtsIMutI	CAGTG	1 cut(s)	131
CciI	TCATGA	1 cut(s)	595
Cfr13I	GGNCC	1 cut(s)	58
Csp6I	GTAC	1 cut(s)	423
CviAII	CATG	4 cut(s)	16, 67, 119, 596
CviQI	GTAC	1 cut(s)	423
DdeI	CTNAG	2 cut(s)	263, 729
DpnI	GATC	6 cut(s)	345, 448, 459, 516, 564, 810
DpnII	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
Eco24I	GRGCYC	1 cut(s)	669
Eco31I	GGTCTC	1 cut(s)	329
Eco57I	CTGAAG	1 cut(s)	801
Eco91I	GGTNACC	1 cut(s)	367
EcoO65I	GGTNACC	1 cut(s)	367
EcoT38I	GRGCYC	1 cut(s)	669
FaeI	CATG	4 cut(s)	19, 70, 122, 599
FaiI	YATR	7 cut(s)	17, 44, 68, 120, 438, 597, 696
FatI	CATG	4 cut(s)	15, 66, 118, 595
FbaI	TGATCA	1 cut(s)	808
Fnu4HI	GCNGC	4 cut(s)	540, 726, 759, 833
FokI	GGATG	2 cut(s)	89, 590
FriOI	GRGCYC	1 cut(s)	669
Fsp4HI	GCNGC	4 cut(s)	540, 726, 759, 833
FspBI	CTAG	3 cut(s)	135, 318, 792
GluI	GCNGC	4 cut(s)	540, 726, 759, 833
GsuI	CTGGAG	1 cut(s)	315
HaeIII	GGCC	1 cut(s)	60
HapII	CCGG	2 cut(s)	12, 365
Hin1II	CATG	4 cut(s)	19, 70, 122, 599
HincII	GTYRAC	2 cut(s)	172, 185
HindII	GTYRAC	2 cut(s)	172, 185
HinfI	GANTC	5 cut(s)	8, 203, 239, 485, 592
HpaI	GTTAAC	1 cut(s)	172
HpaII	CCGG	2 cut(s)	12, 365
HphI	GGTGA	2 cut(s)	392, 492
Hpy166II	GTNNAC	3 cut(s)	172, 185, 323
Hpy188I	TCNGA	3 cut(s)	210, 348, 827
Hpy188III	TCNNGA	3 cut(s)	518, 596, 812
Hpy8I	GTNNAC	3 cut(s)	172, 185, 323
HpyAV	CCTTC	6 cut(s)	71, 160, 271, 656, 715, 732
HpyCH4III	ACNGT	3 cut(s)	85, 126, 176
HpyCH4IV	ACGT	1 cut(s)	804
HpyCH4V	TGCA	2 cut(s)	111, 569
HpyF10VI	GCNNNNNNNGC	1 cut(s)	704
HpyF3I	CTNAG	2 cut(s)	263, 729
HpySE526I	ACGT	1 cut(s)	804
Hsp92II	CATG	4 cut(s)	19, 70, 122, 599
Ksp22I	TGATCA	1 cut(s)	808
KspAI	GTTAAC	1 cut(s)	172
Kzo9I	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
LmnI	GCTCC	2 cut(s)	367, 617
LpnPI	CCDG	7 cut(s)	25, 41, 279, 363, 378, 492, 821
Lsp1109I	GCAGC	3 cut(s)	526, 712, 770
MaeI	CTAG	3 cut(s)	135, 318, 792
MaeII	ACGT	1 cut(s)	804
MaeIII	GTNAC	3 cut(s)	31, 367, 498
MalI	GATC	6 cut(s)	345, 448, 459, 516, 564, 810
MboI	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
MboII	GAAGA	5 cut(s)	17, 611, 614, 641, 785
MflI	RGATCY	1 cut(s)	514
MhlI	GDGCHC	1 cut(s)	669
MlyI	GAGTC	2 cut(s)	494, 601
MnlI	CCTC	5 cut(s)	258, 265, 393, 472, 697
MroXI	GAANNNNTTC	2 cut(s)	243, 606
MseI	TTAA	2 cut(s)	171, 354
MspI	CCGG	2 cut(s)	12, 365
MwoI	GCNNNNNNNGC	1 cut(s)	704
NdeII	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
NlaIII	CATG	4 cut(s)	19, 70, 122, 599
NmuCI	GTSAC	1 cut(s)	498
PagI	TCATGA	1 cut(s)	595
PcsI	WCGNNNNNNNCGW	1 cut(s)	810
PdmI	GAANNNNTTC	2 cut(s)	243, 606
PfeI	GAWTC	3 cut(s)	8, 203, 239
PkrI	GCNGC	4 cut(s)	541, 727, 760, 834
PleI	GAGTC	2 cut(s)	493, 600
PpsI	GAGTC	2 cut(s)	493, 600
Psp1406I	AACGTT	1 cut(s)	804
PspEI	GGTNACC	1 cut(s)	367
PspPI	GGNCC	1 cut(s)	58
PsuI	RGATCY	1 cut(s)	514
RsaI	GTAC	1 cut(s)	424
RsaNI	GTAC	1 cut(s)	423
SaqAI	TTAA	2 cut(s)	171, 354
SatI	GCNGC	4 cut(s)	540, 726, 759, 833
Sau3AI	GATC	6 cut(s)	343, 446, 457, 514, 562, 808
Sau96I	GGNCC	1 cut(s)	58
SchI	GAGTC	2 cut(s)	494, 601
SduI	GDGCHC	1 cut(s)	669
SetI	ASST	6 cut(s)	171, 364, 379, 483, 797, 807
SmlI	CTYRAG	2 cut(s)	326, 796
SmoI	CTYRAG	2 cut(s)	326, 796
SsiI	CCGC	3 cut(s)	159, 180, 833
SspMI	CTAG	3 cut(s)	135, 318, 792
TaaI	ACNGT	3 cut(s)	85, 126, 176
TaiI	ACGT	1 cut(s)	807
TauI	GCSGC	1 cut(s)	835
TfiI	GAWTC	3 cut(s)	8, 203, 239
Tru1I	TTAA	2 cut(s)	171, 354
Tru9I	TTAA	2 cut(s)	171, 354
TscAI	CASTG	1 cut(s)	131
TseFI	GTSAC	1 cut(s)	498
TseI	GCWGC	3 cut(s)	539, 725, 758
Tsp45I	GTSAC	1 cut(s)	498
TspDTI	ATGAA	3 cut(s)	32, 135, 612
TspRI	CASTG	1 cut(s)	131
XmnI	GAANNNNTTC	2 cut(s)	243, 606
XspI	CTAG	3 cut(s)	135, 318, 792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.