AT2G03520

ureide permease

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
1069491 .. 1071421
1931 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G03520.1

Sequence Viewer

Length: 1206 bp
ATGTATGTGGTTGAGAGCAAAGCAGGAGCTATAGGATGTATGATACTCTCATTGTGTTGTTTGGGAAGTTGGCCAGCGATTCTGACTCTATTGGAGAGAAGAGGTCGTCTTCCTCAACACACGTTTCTTGATTTCGCAACCGCGAATCTCTTGGCTGCAATCGTGATAGCATTTTCGCTCGGTGAGATTGGGAAAAGCACGTTTCTAAAACCTGACTTTACCACTCAGCTACCTCAGGATAATTGGCCGTCGGTATTGCTTGCAGTCGCAGGCGGTGTGCTTCTTAGCATCGGGAATTTAGCGACTCAATACGCTTTTGCGTTTGTCGGTTTATCGGTTACTGAAGTTATAACCGCAAGCATTACCGTCGTCATTGGTACAACATTGAATTATTTCTTGGACAACAAGATAAACAAAGCCGAGATCCTCTTCCCTGGCGTAGGTTGCTTCTTGATCGCTGTTTTCCTAGGCGCTGCGGTTCATGCTTCTAATGCAGCTGATGTCAAAGAGAAACTCAAGTCTTTACCTAGCGAAGATTTATATTCTTCTATTGAAAATGGTGAAGACAAGCCTGAAATAGAGAAAACTGATGTCGAATCTCAAGAGAAACTCGCGGAAAAGGCGAAAGCAGGGACGGCAGGATTCTATGTAGAGCTAGAGAACAAAAGAGCAATCAAGGTCTTTGGAAAAAGCATAATGATCGGACTATTCATAACGCTGTTCGCGGGAATCAGCCTTTCTCTATTCTCTCCTGCATTCAACTTGGCAACAAACGATCAATGGAGTACATTGCCAAAAGGCGTACCTAAGCTCGTTGTCTATACCGCCTTTTTCTACTTCTCAATCGCGGGTTTTCTCATTTCTTTGATTCTAAACCTCATCTTTCTTTACCGGCCAATGGTAGGCTTAGCGAGATCATCGCTTAAGAAGTATATATATGACTCCAAAGGTAGAGGTTGGGCGGTTTTCGCTGGATTCTTGTGCGGGTTTGGTAACGGTTTGCAGTTCATGGGAGGTCAAGCCGCTGGATACGCGGCTGCAGACTCTGTCCAGGCACTTCCTCTTGTAAGCACATTTTGGGGTATAGTTTTGTTCGGAGAGTATCGAAAATCGTCGAAGCGAACTTATGCCCTTTTAGTTAGCATGTTGGCCATGTTTGTGGCGGCCGTAGCTATTCTTATGGCCTCTTCCGGTCACCGGAAATGA

Protein Analysis

401

Amino Acids

43.2

Weight (kDa)

8.91

Isoelectric Point (pI)

33.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ureide_permease PF07168 41 - 396 3.5e-185 Ureide permease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 350
AccII CGCG 5 cut(s) 143, 614, 725, 848, 1034
AclWI GGATC 1 cut(s) 418
AcoI YGGCCR 5 cut(s) 71, 245, 893, 1149, 1164
AcsI RAATTY 1 cut(s) 295
AcuI CTGAAG 1 cut(s) 363
AfaI GTAC 3 cut(s) 379, 787, 804
AfiI CCNNNNNNNGG 4 cut(s) 440, 898, 902, 1197
AflII CTTAAG 1 cut(s) 923
AflIII ACRYGT 1 cut(s) 120
AgsI TTSAA 3 cut(s) 388, 554, 760
AjnI CCWGG 2 cut(s) 433, 1050
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AluBI AGCT 6 cut(s) 29, 229, 497, 655, 811, 1172
AluI AGCT 6 cut(s) 29, 229, 497, 655, 811, 1172
AlwI GGATC 1 cut(s) 418
AlwNI CAGNNNCTG 1 cut(s) 1046
AoxI GGCC 6 cut(s) 71, 245, 893, 1149, 1164, 1182
ApeKI GCWGC 4 cut(s) 155, 473, 494, 1037
ApoI RAATTY 1 cut(s) 295
Asp700I GAANNNNTTC 1 cut(s) 392
AspA2I CCTAGG 1 cut(s) 466
AspLEI GCGC 1 cut(s) 473
AsuHPI GGTGA 3 cut(s) 194, 572, 1187
AvrII CCTAGG 1 cut(s) 466
AxyI CCTNAGG 1 cut(s) 234
BalI TGGCCA 2 cut(s) 73, 1151
BbsI GAAGAC 2 cut(s) 101, 570
BbvI GCAGC 4 cut(s) 142, 460, 506, 1024
BceAI ACGGC 3 cut(s) 232, 651, 1151
BcgI CGANNNNNNTGC 4 cut(s) 349, 383, 682, 716
BciT130I CCWGG 2 cut(s) 435, 1052
BciVI GTATCC 1 cut(s) 1022
BfaI CTAG 3 cut(s) 467, 528, 656
BfmI CTRYAG 2 cut(s) 30, 1038
BfoI RGCGCY 1 cut(s) 474
BfrI CTTAAG 1 cut(s) 923
BfuI GTATCC 1 cut(s) 1022
BisI GCNGC 7 cut(s) 156, 474, 495, 1023, 1035, 1038, 1164
BlnI CCTAGG 1 cut(s) 466
BlpI GCTNAGC 1 cut(s) 907
BlsI GCNGC 7 cut(s) 157, 475, 496, 1024, 1036, 1039, 1165
Bme1390I CCNGG 2 cut(s) 435, 1052
BmrFI CCNGG 2 cut(s) 435, 1052
BmsI GCATC 1 cut(s) 297
BpiI GAAGAC 2 cut(s) 101, 570
Bpu10I CCTNAGC 1 cut(s) 807
Bpu1102I GCTNAGC 1 cut(s) 907
BpuEI CTTGAG 2 cut(s) 500, 585
BsaJI CCNNGG 2 cut(s) 433, 466
BsaWI WCCGGW 2 cut(s) 1190, 1197
Bsc4I CCNNNNNNNGG 4 cut(s) 440, 898, 902, 1197
Bse118I RCCGGY 1 cut(s) 891
Bse21I CCTNAGG 1 cut(s) 234
Bse3DI GCAATG 1 cut(s) 788
BseBI CCWGG 2 cut(s) 435, 1052
BseDI CCNNGG 2 cut(s) 433, 466
BseGI GGATG 1 cut(s) 41
BseLI CCNNNNNNNGG 4 cut(s) 440, 898, 902, 1197
BseMI GCAATG 1 cut(s) 788
BseMII CTCAG 2 cut(s) 239, 248
BseX3I CGGCCG 1 cut(s) 1164
BseXI GCAGC 4 cut(s) 142, 460, 506, 1024
Bsh1236I CGCG 5 cut(s) 143, 614, 725, 848, 1034
Bsh1285I CGRYCG 1 cut(s) 1167
BshFI GGCC 6 cut(s) 73, 247, 895, 1151, 1166, 1184
BsiEI CGRYCG 1 cut(s) 1167
BsiSI CCGG 3 cut(s) 892, 1191, 1198
BslFI GGGAC 1 cut(s) 646
BslI CCNNNNNNNGG 4 cut(s) 440, 898, 902, 1197
BsmFI GGGAC 1 cut(s) 646
BsmI GAATGC 1 cut(s) 755
BsnI GGCC 6 cut(s) 73, 247, 895, 1151, 1166, 1184
Bsp143I GATC 5 cut(s) 423, 453, 699, 775, 914
Bsp1720I GCTNAGC 1 cut(s) 907
BspANI GGCC 6 cut(s) 73, 247, 895, 1151, 1166, 1184
BspCNI CTCAG 2 cut(s) 238, 247
BspFNI CGCG 5 cut(s) 143, 614, 725, 848, 1034
BspMAI CTGCAG 1 cut(s) 1042
BspPI GGATC 1 cut(s) 418
BspTI CTTAAG 1 cut(s) 923
BsrDI GCAATG 1 cut(s) 788
BsrFI RCCGGY 1 cut(s) 891
BssAI RCCGGY 1 cut(s) 891
BssECI CCNNGG 2 cut(s) 433, 466
BssMI GATC 5 cut(s) 423, 453, 699, 775, 914
BssT1I CCWWGG 1 cut(s) 466
Bst2UI CCWGG 2 cut(s) 435, 1052
Bst4CI ACNGT 2 cut(s) 367, 998
Bst6I CTCTTC 3 cut(s) 94, 434, 1192
BstAFI CTTAAG 1 cut(s) 923
BstC8I GCNNGC 4 cut(s) 75, 261, 271, 358
BstDEI CTNAG 5 cut(s) 225, 234, 284, 807, 907
BstEII GGTNACC 1 cut(s) 1193
BstENI CCTNNNNNAGG 1 cut(s) 438
BstF5I GGATG 1 cut(s) 41
BstFNI CGCG 5 cut(s) 143, 614, 725, 848, 1034
BstH2I RGCGCY 1 cut(s) 474
BstHHI GCGC 1 cut(s) 473
BstKTI GATC 5 cut(s) 426, 456, 702, 778, 917
BstMBI GATC 5 cut(s) 423, 453, 699, 775, 914
BstMCI CGRYCG 1 cut(s) 1167
BstMWI GCNNNNNNNGC 8 cut(s) 444, 482, 491, 620, 635, 968, 1031, 1169
BstNI CCWGG 2 cut(s) 435, 1052
BstNSI RCATGY 1 cut(s) 1147
BstPI GGTNACC 1 cut(s) 1193
BstSCI CCNGG 2 cut(s) 433, 1050
BstSFI CTRYAG 2 cut(s) 30, 1038
BstUI CGCG 5 cut(s) 143, 614, 725, 848, 1034
BstV1I GCAGC 4 cut(s) 142, 460, 506, 1024
BstV2I GAAGAC 2 cut(s) 101, 570
BstX2I RGATCY 1 cut(s) 423
BstXI CCANNNNNNTGG 1 cut(s) 1159
BstYI RGATCY 1 cut(s) 423
BstZI CGGCCG 1 cut(s) 1164
Bsu36I CCTNAGG 1 cut(s) 234
BsuI GTATCC 1 cut(s) 1022
BsuRI GGCC 6 cut(s) 73, 247, 895, 1151, 1166, 1184
BtgZI GCGATG 1 cut(s) 903
BtsCI GGATG 1 cut(s) 41
Cac8I GCNNGC 4 cut(s) 75, 261, 271, 358
CaiI CAGNNNCTG 1 cut(s) 1046
CfoI GCGC 1 cut(s) 473
Cfr10I RCCGGY 1 cut(s) 891
Csp6I GTAC 3 cut(s) 378, 786, 803
CviAII CATG 4 cut(s) 482, 1009, 1144, 1153
CviQI GTAC 3 cut(s) 378, 786, 803
DdeI CTNAG 5 cut(s) 225, 234, 284, 807, 907
DpnI GATC 5 cut(s) 425, 455, 701, 777, 916
DpnII GATC 5 cut(s) 423, 453, 699, 775, 914
EaeI YGGCCR 5 cut(s) 71, 245, 893, 1149, 1164
EagI CGGCCG 1 cut(s) 1164
Eam1104I CTCTTC 3 cut(s) 94, 434, 1192
EarI CTCTTC 3 cut(s) 94, 434, 1192
EclXI CGGCCG 1 cut(s) 1164
Eco130I CCWWGG 1 cut(s) 466
Eco52I CGGCCG 1 cut(s) 1164
Eco57I CTGAAG 1 cut(s) 363
Eco81I CCTNAGG 1 cut(s) 234
Eco91I GGTNACC 1 cut(s) 1193
EcoNI CCTNNNNNAGG 1 cut(s) 438
EcoO65I GGTNACC 1 cut(s) 1193
EcoRII CCWGG 2 cut(s) 433, 1050
EcoT14I CCWWGG 1 cut(s) 466
ErhI CCWWGG 1 cut(s) 466
FaeI CATG 4 cut(s) 485, 1012, 1147, 1156
FaqI GGGAC 1 cut(s) 646
FatI CATG 4 cut(s) 481, 1008, 1143, 1152
FauI CCCGC 3 cut(s) 718, 841, 977
Fnu4HI GCNGC 7 cut(s) 156, 474, 495, 1023, 1035, 1038, 1164
FokI GGATG 1 cut(s) 48
Fsp4HI GCNGC 7 cut(s) 156, 474, 495, 1023, 1035, 1038, 1164
FspBI CTAG 3 cut(s) 467, 528, 656
GlaI GCGC 1 cut(s) 472
GluI GCNGC 7 cut(s) 156, 474, 495, 1023, 1035, 1038, 1164
HaeII RGCGCY 1 cut(s) 474
HaeIII GGCC 6 cut(s) 73, 247, 895, 1151, 1166, 1184
HapII CCGG 3 cut(s) 892, 1191, 1198
HhaI GCGC 1 cut(s) 473
Hin1II CATG 4 cut(s) 485, 1012, 1147, 1156
Hin6I GCGC 1 cut(s) 471
HinP1I GCGC 1 cut(s) 471
HpaII CCGG 3 cut(s) 892, 1191, 1198
HphI GGTGA 3 cut(s) 194, 572, 1187
Hpy188I TCNGA 3 cut(s) 84, 704, 1097
Hpy188III TCNNGA 6 cut(s) 128, 163, 236, 292, 451, 602
Hpy99I CGWCG 3 cut(s) 253, 371, 1117
HpyCH4III ACNGT 2 cut(s) 367, 998
HpyCH4IV ACGT 2 cut(s) 122, 200
HpyCH4V TGCA 6 cut(s) 158, 263, 494, 755, 1003, 1040
HpyF10VI GCNNNNNNNGC 8 cut(s) 444, 482, 491, 620, 635, 968, 1031, 1169
HpyF3I CTNAG 5 cut(s) 225, 234, 284, 807, 907
HpySE526I ACGT 2 cut(s) 122, 200
Hsp92II CATG 4 cut(s) 485, 1012, 1147, 1156
HspAI GCGC 1 cut(s) 471
Kzo9I GATC 5 cut(s) 423, 453, 699, 775, 914
LmnI GCTCC 1 cut(s) 26
Lsp1109I GCAGC 4 cut(s) 142, 460, 506, 1024
LweI GCATC 1 cut(s) 297
MaeI CTAG 3 cut(s) 467, 528, 656
MaeII ACGT 2 cut(s) 122, 200
MaeIII GTNAC 3 cut(s) 337, 992, 1193
MalI GATC 5 cut(s) 425, 455, 701, 777, 916
MboI GATC 5 cut(s) 423, 453, 699, 775, 914
MboII GAAGA 7 cut(s) 101, 111, 421, 537, 545, 575, 1179
MflI RGATCY 1 cut(s) 423
MlsI TGGCCA 2 cut(s) 73, 1151
MluCI AATT 3 cut(s) 241, 295, 388
MluNI TGGCCA 2 cut(s) 73, 1151
MlyI GAGTC 4 cut(s) 79, 298, 935, 1037
MnlI CCTC 9 cut(s) 95, 123, 243, 437, 887, 947, 1007, 1071, 1195
Mox20I TGGCCA 2 cut(s) 73, 1151
MroXI GAANNNNTTC 1 cut(s) 392
MscI TGGCCA 2 cut(s) 73, 1151
MseI TTAA 1 cut(s) 924
MslI CAYNNNNRTG 1 cut(s) 1157
Msp20I TGGCCA 2 cut(s) 73, 1151
MspA1I CMGCKG 2 cut(s) 497, 1025
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 3 cut(s) 892, 1191, 1198
MspR9I CCNGG 2 cut(s) 435, 1052
Mva1269I GAATGC 1 cut(s) 755
MvaI CCWGG 2 cut(s) 435, 1052
MvnI CGCG 5 cut(s) 143, 614, 725, 848, 1034
MwoI GCNNNNNNNGC 8 cut(s) 444, 482, 491, 620, 635, 968, 1031, 1169
NdeII GATC 5 cut(s) 423, 453, 699, 775, 914
NlaIII CATG 4 cut(s) 485, 1012, 1147, 1156
NmeAIII GCCGAG 1 cut(s) 445
NmuCI GTSAC 1 cut(s) 1193
NspI RCATGY 1 cut(s) 1147
PctI GAATGC 1 cut(s) 755
PdmI GAANNNNTTC 1 cut(s) 392
PfeI GAWTC 7 cut(s) 79, 145, 596, 642, 729, 868, 975
PflFI GACNNNGTC 1 cut(s) 1046
PkrI GCNGC 7 cut(s) 157, 475, 496, 1024, 1036, 1039, 1165
PleI GAGTC 4 cut(s) 79, 298, 935, 1037
PpsI GAGTC 4 cut(s) 79, 298, 935, 1037
PsiI TTATAA 1 cut(s) 350
Psp6I CCWGG 2 cut(s) 433, 1050
PspEI GGTNACC 1 cut(s) 1193
PspGI CCWGG 2 cut(s) 433, 1050
PstI CTGCAG 1 cut(s) 1042
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 1 cut(s) 423
PsyI GACNNNGTC 1 cut(s) 1046
PvuII CAGCTG 1 cut(s) 497
RsaI GTAC 3 cut(s) 379, 787, 804
RsaNI GTAC 3 cut(s) 378, 786, 803
RseI CAYNNNNRTG 1 cut(s) 1157
SaqAI TTAA 1 cut(s) 924
SatI GCNGC 7 cut(s) 156, 474, 495, 1023, 1035, 1038, 1164
Sau3AI GATC 5 cut(s) 423, 453, 699, 775, 914
SchI GAGTC 4 cut(s) 79, 298, 935, 1037
ScrFI CCNGG 2 cut(s) 435, 1052
SfaNI GCATC 1 cut(s) 297
SfcI CTRYAG 2 cut(s) 30, 1038
SmiMI CAYNNNNRTG 1 cut(s) 1157
SmlI CTYRAG 3 cut(s) 515, 600, 923
SmoI CTYRAG 3 cut(s) 515, 600, 923
Sse9I AATT 3 cut(s) 241, 295, 388
SspMI CTAG 3 cut(s) 467, 528, 656
StyD4I CCNGG 2 cut(s) 433, 1050
StyI CCWWGG 1 cut(s) 466
TaaI ACNGT 2 cut(s) 367, 998
TaiI ACGT 2 cut(s) 125, 203
TaqI TCGA 3 cut(s) 594, 1105, 1115
TasI AATT 3 cut(s) 241, 295, 388
TatI WGTACW 1 cut(s) 785
TauI GCSGC 3 cut(s) 1025, 1037, 1166
TfiI GAWTC 7 cut(s) 79, 145, 596, 642, 729, 868, 975
Tru1I TTAA 1 cut(s) 924
Tru9I TTAA 1 cut(s) 924
TseFI GTSAC 1 cut(s) 1193
TseI GCWGC 4 cut(s) 155, 473, 494, 1037
Tsp45I GTSAC 1 cut(s) 1193
TspDTI ATGAA 3 cut(s) 470, 700, 997
Tth111I GACNNNGTC 1 cut(s) 1046
Vha464I CTTAAG 1 cut(s) 923
XagI CCTNNNNNAGG 1 cut(s) 438
XapI RAATTY 1 cut(s) 295
XceI RCATGY 1 cut(s) 1147
XmaJI CCTAGG 1 cut(s) 466
XmnI GAANNNNTTC 1 cut(s) 392
XspI CTAG 3 cut(s) 467, 528, 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.