Rmu_sc0019260.1_g000004

Ureide permease

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019260.1
Physical Location & Seq
Forward (+)
28169 .. 31848
3680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019260.1_g000004.1.cds

Sequence Viewer

Length: 1356 bp
atgtatgtggtggatagcaaaggaggtgctatagcatgcatgctgctggcactgttcttattggggacatggcctgctgtcctgactatgctcgaaagaagaggccggcttcctcagcatacttatttggattactctatcaccaatttgttggttgctgttctgattgctttgacatttggtcagataggcagtagcacacctgacaagcccaattttataactcaactttcacaggataatttgcctagtgttttattcgcaatggcgggtgggatagtcctgagccttggaaatctttcttcacagtatgcatttgctttagttggtttgtcactgacagaggtgatcactgcaagcatcactactgtcataggcacaaccttgaattacttcttggacaacagaattaatagagccgagattcttttccctggtgttgcttgcttcttgattgcggtttgtcttggctctgctgttcactcgtccaatgcagctgataacaaagtaaaacttgacagttttcccagtgattcaaaagatggagaaaaggctccaaaacaaattccagataaggatgggttaaaggatttggagagtggaaatgagaaagcgaaggctggcactgcagactatcttgtacagattgagaaccaaagagcaattaaggtttttgggaagaagacttacattggactggccataactttctttgcgggactttgcttctccctcttcacaccagcattcaacgtggccacaaatgatcagtggcatactttgaagaaaggagttcctcatttggttgtctatactgcatttttctacttctcagcatcttgtttcgtcattgctatcattttaaacaccatcttcctttaccgccctatactagacttacccaaaagttcattcaaagcttacttgaacgactgggagggtaggggttgggcccttttggctggtctcatatgtggattcggcaacggtctccaattcatgggaggtcaagctgcaggatatgctgcagctgattctgttcaggatatccctggtgttccactgctggtttttttgccgtctgagtggaaattttcgagggggttaaagatgtatgtggtggaaggcaaaggaggtgccatagcatgcatgctgctggccttgctcttcttggggacatggcctgctatcctgactatgctcgaaagaagaggccgacttcctcagcatacttatctggattattcgatcaccaatttcttggctgctatccttattgctttgacatttggtcagatagggagtagcacagctgaggagcccaattttataactcaacttttgcaggtgagttag

Protein Analysis

451

Amino Acids

48.87

Weight (kDa)

7.55

Isoelectric Point (pI)

33.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 221, 1331
AarI CACCTGC 1 cut(s) 1336
Acc36I ACCTGC 1 cut(s) 1336
AccB1I GGYRCC 1 cut(s) 1136
AccB7I CCANNNNNTGG 1 cut(s) 1000
AciI CCGC 4 cut(s) 269, 458, 716, 883
AcoI YGGCCR 2 cut(s) 699, 756
AcsI RAATTY 2 cut(s) 564, 1091
AfaI GTAC 1 cut(s) 642
AfiI CCNNNNNNNGG 1 cut(s) 1000
AgsI TTSAA 6 cut(s) 388, 537, 751, 784, 916, 928
AhdI GACNNNNNGTC 2 cut(s) 180, 1290
AjnI CCWGG 2 cut(s) 433, 1051
AjuI GAANNNNNNNTTGG 4 cut(s) 380, 412, 896, 928
AluBI AGCT 5 cut(s) 497, 920, 1013, 1031, 1313
AluI AGCT 5 cut(s) 497, 920, 1013, 1031, 1313
Alw26I GTCTC 2 cut(s) 971, 995
AoxI GGCC 8 cut(s) 71, 103, 699, 756, 951, 1158, 1181, 1213
ApaI GGGCCC 1 cut(s) 955
ApeKI GCWGC 7 cut(s) 43, 494, 1013, 1025, 1028, 1153, 1265
ApoI RAATTY 2 cut(s) 564, 1091
AseI ATTAAT 1 cut(s) 411
Asp700I GAANNNNTTC 2 cut(s) 298, 392
AspS9I GGNCC 2 cut(s) 951, 952
AsuHPI GGTGA 3 cut(s) 133, 358, 1243
BaeGI GKGCMC 1 cut(s) 955
BalI TGGCCA 2 cut(s) 701, 758
BanI GGYRCC 1 cut(s) 1136
BanII GRGCYC 2 cut(s) 955, 1323
BarI GAAGNNNNNNTAC 2 cut(s) 671, 703
BbsI GAAGAC 1 cut(s) 689
BbvCI CCTCAGC 3 cut(s) 114, 1224, 1314
BbvI GCAGC 7 cut(s) 30, 506, 1000, 1012, 1040, 1140, 1252
BccI CCATC 3 cut(s) 536, 572, 878
BceAI ACGGC 1 cut(s) 1063
BciT130I CCWGG 2 cut(s) 435, 1053
BclI TGATCA 2 cut(s) 348, 766
BcoDI GTCTC 2 cut(s) 971, 995
BfaI CTAG 2 cut(s) 249, 893
BfmI CTRYAG 4 cut(s) 30, 627, 1014, 1026
BfuAI ACCTGC 1 cut(s) 1336
BglI GCCNNNNNGGC 1 cut(s) 959
BisI GCNGC 7 cut(s) 44, 495, 1014, 1026, 1029, 1154, 1266
BlsI GCNGC 7 cut(s) 45, 496, 1015, 1027, 1030, 1155, 1267
Bme1390I CCNGG 2 cut(s) 435, 1053
BmeRI GACNNNNNGTC 2 cut(s) 180, 1290
BmgT120I GGNCC 2 cut(s) 951, 952
BmiI GGNNCC 4 cut(s) 555, 953, 1138, 1320
BmrFI CCNGG 2 cut(s) 435, 1053
BmrI ACTGGG 2 cut(s) 522, 943
BmsI GCATC 2 cut(s) 369, 845
BmuI ACTGGG 2 cut(s) 522, 943
BpiI GAAGAC 1 cut(s) 689
Bpu10I CCTNAGC 4 cut(s) 114, 284, 1224, 1314
BsaI GGTCTC 2 cut(s) 971, 995
BsaJI CCNNGG 3 cut(s) 289, 433, 1051
Bsc4I CCNNNNNNNGG 1 cut(s) 1000
Bse118I RCCGGY 1 cut(s) 105
Bse1I ACTGG 3 cut(s) 528, 702, 938
Bse3DI GCAATG 2 cut(s) 270, 849
BseBI CCWGG 2 cut(s) 435, 1053
BseDI CCNNGG 3 cut(s) 289, 433, 1051
BseGI GGATG 1 cut(s) 583
BseLI CCNNNNNNNGG 1 cut(s) 1000
BseMI GCAATG 2 cut(s) 270, 849
BseMII CTCAG 6 cut(s) 128, 275, 846, 1074, 1238, 1305
BseNI ACTGG 3 cut(s) 528, 702, 938
BseRI GAGGAG 1 cut(s) 1331
BseSI GKGCMC 1 cut(s) 955
BseXI GCAGC 7 cut(s) 30, 506, 1000, 1012, 1040, 1140, 1252
BshFI GGCC 8 cut(s) 73, 105, 701, 758, 953, 1160, 1183, 1215
BshNI GGYRCC 1 cut(s) 1136
BsiSI CCGG 1 cut(s) 106
BslFI GGGAC 3 cut(s) 79, 732, 1189
BslI CCNNNNNNNGG 1 cut(s) 1000
BsmAI GTCTC 2 cut(s) 971, 995
BsmFI GGGAC 3 cut(s) 79, 732, 1189
BsmI GAATGC 1 cut(s) 746
BsnI GGCC 8 cut(s) 73, 105, 701, 758, 953, 1160, 1183, 1215
Bso31I GGTCTC 2 cut(s) 971, 995
Bsp120I GGGCCC 1 cut(s) 951
Bsp1286I GDGCHC 2 cut(s) 955, 1323
Bsp1407I TGTACA 1 cut(s) 640
Bsp143I GATC 3 cut(s) 348, 766, 1248
BspACI CCGC 4 cut(s) 269, 458, 716, 883
BspANI GGCC 8 cut(s) 73, 105, 701, 758, 953, 1160, 1183, 1215
BspCNI CTCAG 6 cut(s) 127, 276, 845, 1075, 1237, 1306
BspLI GGNNCC 4 cut(s) 555, 953, 1138, 1320
BspMAI CTGCAG 3 cut(s) 631, 1018, 1030
BspMI ACCTGC 1 cut(s) 1336
BspQI GCTCTTC 1 cut(s) 1172
BspT107I GGYRCC 1 cut(s) 1136
BspTNI GGTCTC 2 cut(s) 971, 995
BsrDI GCAATG 2 cut(s) 270, 849
BsrFI RCCGGY 1 cut(s) 105
BsrGI TGTACA 1 cut(s) 640
BsrI ACTGG 3 cut(s) 528, 702, 938
BssAI RCCGGY 1 cut(s) 105
BssECI CCNNGG 3 cut(s) 289, 433, 1051
BssMI GATC 3 cut(s) 348, 766, 1248
BssT1I CCWWGG 1 cut(s) 289
Bst2UI CCWGG 2 cut(s) 435, 1053
Bst4CI ACNGT 5 cut(s) 54, 309, 370, 521, 989
Bst6I CTCTTC 4 cut(s) 94, 740, 1172, 1204
BstAPI GCANNNNNTGC 1 cut(s) 1022
BstAUI TGTACA 1 cut(s) 640
BstDEI CTNAG 6 cut(s) 114, 284, 832, 1083, 1224, 1314
BstF5I GGATG 1 cut(s) 583
BstKTI GATC 3 cut(s) 351, 769, 1251
BstMAI GTCTC 2 cut(s) 971, 995
BstMBI GATC 3 cut(s) 348, 766, 1248
BstMWI GCNNNNNNNGC 5 cut(s) 115, 626, 959, 1022, 1162
BstNI CCWGG 2 cut(s) 435, 1053
BstNSI RCATGY 4 cut(s) 39, 43, 1149, 1153
BstSCI CCNGG 2 cut(s) 433, 1051
BstSFI CTRYAG 4 cut(s) 30, 627, 1014, 1026
BstSLI GKGCMC 1 cut(s) 955
BstV1I GCAGC 7 cut(s) 30, 506, 1000, 1012, 1040, 1140, 1252
BstV2I GAAGAC 1 cut(s) 689
BstXI CCANNNNNNTGG 2 cut(s) 151, 1261
BsuRI GGCC 8 cut(s) 73, 105, 701, 758, 953, 1160, 1183, 1215
BtsCI GGATG 1 cut(s) 583
BtsI GCAGTG 3 cut(s) 351, 624, 1061
BtsIMutI CAGTG 7 cut(s) 50, 335, 351, 535, 624, 776, 1061
BveI ACCTGC 1 cut(s) 1336
Cfr10I RCCGGY 1 cut(s) 105
Cfr13I GGNCC 2 cut(s) 951, 952
Csp6I GTAC 1 cut(s) 641
CviAII CATG 7 cut(s) 36, 40, 69, 1000, 1146, 1150, 1179
CviQI GTAC 1 cut(s) 641
DdeI CTNAG 6 cut(s) 114, 284, 832, 1083, 1224, 1314
DpnI GATC 3 cut(s) 350, 768, 1250
DpnII GATC 3 cut(s) 348, 766, 1248
DraI TTTAAA 1 cut(s) 864
DriI GACNNNNNGTC 2 cut(s) 180, 1290
EaeI YGGCCR 2 cut(s) 699, 756
Eam1104I CTCTTC 4 cut(s) 94, 740, 1172, 1204
Eam1105I GACNNNNNGTC 2 cut(s) 180, 1290
EarI CTCTTC 4 cut(s) 94, 740, 1172, 1204
Eco130I CCWWGG 1 cut(s) 289
Eco24I GRGCYC 2 cut(s) 955, 1323
Eco31I GGTCTC 2 cut(s) 971, 995
Eco32I GATATC 1 cut(s) 1048
EcoO109I RGGNCCY 1 cut(s) 952
EcoRII CCWGG 2 cut(s) 433, 1051
EcoRV GATATC 1 cut(s) 1048
EcoT14I CCWWGG 1 cut(s) 289
EcoT22I ATGCAT 3 cut(s) 41, 316, 1151
EcoT38I GRGCYC 2 cut(s) 955, 1323
ErhI CCWWGG 1 cut(s) 289
FaeI CATG 7 cut(s) 39, 43, 72, 1003, 1149, 1153, 1182
FalI AAGNNNNNCTT 2 cut(s) 498, 530
FaqI GGGAC 3 cut(s) 79, 732, 1189
FatI CATG 7 cut(s) 35, 39, 68, 999, 1145, 1149, 1178
FauI CCCGC 2 cut(s) 262, 709
FauNDI CATATG 1 cut(s) 971
FbaI TGATCA 2 cut(s) 348, 766
Fnu4HI GCNGC 7 cut(s) 44, 495, 1014, 1026, 1029, 1154, 1266
FokI GGATG 1 cut(s) 590
FriOI GRGCYC 2 cut(s) 955, 1323
Fsp4HI GCNGC 7 cut(s) 44, 495, 1014, 1026, 1029, 1154, 1266
FspBI CTAG 2 cut(s) 249, 893
GluI GCNGC 7 cut(s) 44, 495, 1014, 1026, 1029, 1154, 1266
HaeIII GGCC 8 cut(s) 73, 105, 701, 758, 953, 1160, 1183, 1215
HapII CCGG 1 cut(s) 106
Hin1II CATG 7 cut(s) 39, 43, 72, 1003, 1149, 1153, 1182
HindIII AAGCTT 1 cut(s) 918
HinfI GANTC 4 cut(s) 424, 533, 978, 1034
HpaII CCGG 1 cut(s) 106
HphI GGTGA 3 cut(s) 133, 358, 1243
Hpy166II GTNNAC 1 cut(s) 481
Hpy188I TCNGA 4 cut(s) 165, 186, 1084, 1296
Hpy188III TCNNGA 7 cut(s) 82, 283, 451, 569, 1043, 1192, 1238
Hpy8I GTNNAC 1 cut(s) 481
HpyAV CCTTC 2 cut(s) 610, 1118
HpyCH4III ACNGT 5 cut(s) 54, 309, 370, 521, 989
HpyCH4IV ACGT 1 cut(s) 753
HpyF10VI GCNNNNNNNGC 5 cut(s) 115, 626, 959, 1022, 1162
HpyF3I CTNAG 6 cut(s) 114, 284, 832, 1083, 1224, 1314
HpySE526I ACGT 1 cut(s) 753
Hsp92II CATG 7 cut(s) 39, 43, 72, 1003, 1149, 1153, 1182
KroI GCCGGC 1 cut(s) 105
KroNI GCCGGC 1 cut(s) 107
Ksp22I TGATCA 2 cut(s) 348, 766
Kzo9I GATC 3 cut(s) 348, 766, 1248
LguI GCTCTTC 1 cut(s) 1172
LmnI GCTCC 2 cut(s) 559, 1318
Lsp1109I GCAGC 7 cut(s) 30, 506, 1000, 1012, 1040, 1140, 1252
LweI GCATC 2 cut(s) 369, 845
MaeI CTAG 2 cut(s) 249, 893
MaeII ACGT 1 cut(s) 753
MaeIII GTNAC 1 cut(s) 333
MalI GATC 3 cut(s) 350, 768, 1250
MboI GATC 3 cut(s) 348, 766, 1248
MboII GAAGA 9 cut(s) 111, 294, 691, 694, 727, 796, 865, 1159, 1221
MhlI GDGCHC 2 cut(s) 955, 1323
MlsI TGGCCA 2 cut(s) 701, 758
MluNI TGGCCA 2 cut(s) 701, 758
Mox20I TGGCCA 2 cut(s) 701, 758
Mph1103I ATGCAT 3 cut(s) 41, 316, 1151
MroNI GCCGGC 1 cut(s) 105
MroXI GAANNNNTTC 2 cut(s) 298, 392
MscI TGGCCA 2 cut(s) 701, 758
MseI TTAA 5 cut(s) 411, 584, 666, 863, 1106
Msp20I TGGCCA 2 cut(s) 701, 758
MspA1I CMGCKG 3 cut(s) 497, 1031, 1313
MspI CCGG 1 cut(s) 106
MspR9I CCNGG 2 cut(s) 435, 1053
Mva1269I GAATGC 1 cut(s) 746
MvaI CCWGG 2 cut(s) 435, 1053
MwoI GCNNNNNNNGC 5 cut(s) 115, 626, 959, 1022, 1162
NaeI GCCGGC 1 cut(s) 107
NdeI CATATG 1 cut(s) 971
NdeII GATC 3 cut(s) 348, 766, 1248
NgoMIV GCCGGC 1 cut(s) 105
NlaIII CATG 7 cut(s) 39, 43, 72, 1003, 1149, 1153, 1182
NlaIV GGNNCC 4 cut(s) 555, 953, 1138, 1320
NmeAIII GCCGAG 1 cut(s) 445
NmuCI GTSAC 1 cut(s) 333
NsiI ATGCAT 3 cut(s) 41, 316, 1151
NspI RCATGY 4 cut(s) 39, 43, 1149, 1153
PaeI GCATGC 4 cut(s) 39, 43, 1149, 1153
PaqCI CACCTGC 1 cut(s) 1336
PciSI GCTCTTC 1 cut(s) 1172
PctI GAATGC 1 cut(s) 746
PdiI GCCGGC 1 cut(s) 107
PdmI GAANNNNTTC 2 cut(s) 298, 392
PfeI GAWTC 4 cut(s) 424, 533, 978, 1034
PflMI CCANNNNNTGG 1 cut(s) 1000
PkrI GCNGC 7 cut(s) 45, 496, 1015, 1027, 1030, 1155, 1267
PshBI ATTAAT 1 cut(s) 411
PsiI TTATAA 2 cut(s) 221, 1331
Psp6I CCWGG 2 cut(s) 433, 1051
PspGI CCWGG 2 cut(s) 433, 1051
PspN4I GGNNCC 4 cut(s) 555, 953, 1138, 1320
PspOMI GGGCCC 1 cut(s) 951
PspPI GGNCC 2 cut(s) 951, 952
PstI CTGCAG 3 cut(s) 631, 1018, 1030
PvuII CAGCTG 3 cut(s) 497, 1031, 1313
RsaI GTAC 1 cut(s) 642
RsaNI GTAC 1 cut(s) 641
SapI GCTCTTC 1 cut(s) 1172
SaqAI TTAA 5 cut(s) 411, 584, 666, 863, 1106
SatI GCNGC 7 cut(s) 44, 495, 1014, 1026, 1029, 1154, 1266
Sau3AI GATC 3 cut(s) 348, 766, 1248
Sau96I GGNCC 2 cut(s) 951, 952
ScrFI CCNGG 2 cut(s) 435, 1053
SduI GDGCHC 2 cut(s) 955, 1323
SfaNI GCATC 2 cut(s) 369, 845
SfcI CTRYAG 4 cut(s) 30, 627, 1014, 1026
SphI GCATGC 4 cut(s) 39, 43, 1149, 1153
SsiI CCGC 4 cut(s) 269, 458, 716, 883
SspMI CTAG 2 cut(s) 249, 893
StyD4I CCNGG 2 cut(s) 433, 1051
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 5 cut(s) 54, 309, 370, 521, 989
TaiI ACGT 1 cut(s) 756
TaqI TCGA 4 cut(s) 93, 1097, 1203, 1247
TatI WGTACW 1 cut(s) 640
TfiI GAWTC 4 cut(s) 424, 533, 978, 1034
Tru1I TTAA 5 cut(s) 411, 584, 666, 863, 1106
Tru9I TTAA 5 cut(s) 411, 584, 666, 863, 1106
TscAI CASTG 7 cut(s) 57, 342, 358, 535, 631, 776, 1068
TseFI GTSAC 1 cut(s) 333
TseI GCWGC 7 cut(s) 43, 494, 1013, 1025, 1028, 1153, 1265
Tsp45I GTSAC 1 cut(s) 333
TspDTI ATGAA 2 cut(s) 900, 988
TspRI CASTG 7 cut(s) 57, 342, 358, 535, 631, 776, 1068
Van91I CCANNNNNTGG 1 cut(s) 1000
VspI ATTAAT 1 cut(s) 411
XapI RAATTY 2 cut(s) 564, 1091
XceI RCATGY 4 cut(s) 39, 43, 1149, 1153
XmnI GAANNNNTTC 2 cut(s) 298, 392
XspI CTAG 2 cut(s) 249, 893
Zsp2I ATGCAT 3 cut(s) 41, 316, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.