Rh4DG366600

Ureide permease

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
58683132 .. 58685204
2073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG366600.1

Sequence Viewer

Length: 1197 bp
ATGTATGTGGTGGATAGCAAAGGAGGTGCTATAGCATGCATGCTGCTGGCACTGTTCTTATTGGGGACATGGCCTGCTGTCCTGACTATGCTCGAAAGAAGAGGCCGGCTTCCTCAGCATACTTATTTGGATTACTCTATCACCAATTTGTTGGTTGCTGTTCTGATTGCTTTGACATTTGGTCAGATAGGCAGCAGCACACCTGACAAGCCCAATTTTATAACTCAACTTTCACAGGATAATTTGCCTAGTGTTTTATTCGCAATGGCGGGTGGGATAGTCCTGAGCCTTGGAAATCTTTCTTCACAGTATGCATTTGCTTTAGTTGGTTTGTCACTGACAGAGGTGATCACTGCAAGCATCACAACTGTCATAGGCACAACCTTGAATTACTTCTTAGACAACAGAATTAATAAAGCCGAGATTCTTTTCCCTGGTGTTGCTTGCTTCTTGATTGCGGTTTGTCTTGGCTCTGCTGTTCACTCGTCCAATGCAGCTGATAACAAAGTAAAACTTGACAGTCTTCCCAGTGATTCAAAAGATGGAGAAAAGGCTCTAAAACAAATTCCAGATAAGGATGGGTTAAAGGATTTGGAGAGTGGAAATGAGAAAGCGAAGGCTGGCACTGCAGACTATCTTGTACAGATTGAGAACCAAAGAGCAATTAAGGTTTTTGGGAAGAAGACTTACATTGGACTGGCCATAACTTTCTTTGCGGGACTGTGCTTCTCCCTCTTCACACCGGCATTCAACGTGGCCACAAATGATCAGTGGCATACTTTGAAGAAAGGAGTTCCTCATTTGGTTGTCTATACTGCATTTTTCTACTTCTCAGTATCTTGTTTCGTCATTGCTATCATTTTAAACACCATCTTCCTTTACCGCCCCATACTAGACTTACCCAAAAGTTCATTCAAAGCTTACTTGAACGACTGGGAGGGTAGGGGTTGGGCCCTTTTGGCTGGCCTCATATGTGGATTCGGCAACGGTCTCCAATTCATGGGAGGTCAAGCTGCAGGATATGCTGCAGCTGATTCTGTTCAGGCACTTCCACTTGTGAGCACTTTCTGGGGCATACTTCTGTTTGGAGAATACCGAAAATCGTCAAGAAGGACATATATATTGCTTACTGGCATGTTGACTATGTTTATTGTTGCTGTTGCTGTCCTCATGGCATCATCGGGGCATCGAAAATGA

Protein Analysis

398

Amino Acids

43.1

Weight (kDa)

8.87

Isoelectric Point (pI)

30.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ureide_permease PF07168 41 - 393 2.2e-192 Ureide permease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
AccB7I CCANNNNNTGG 1 cut(s) 1000
AciI CCGC 4 cut(s) 269, 458, 716, 883
AcoI YGGCCR 2 cut(s) 699, 756
AcsI RAATTY 1 cut(s) 564
AfaI GTAC 1 cut(s) 642
AfiI CCNNNNNNNGG 1 cut(s) 1000
AgsI TTSAA 6 cut(s) 388, 537, 751, 784, 916, 928
AhdI GACNNNNNGTC 1 cut(s) 180
AjnI CCWGG 1 cut(s) 433
AjuI GAANNNNNNNTTGG 2 cut(s) 896, 928
AluBI AGCT 4 cut(s) 497, 920, 1013, 1031
AluI AGCT 4 cut(s) 497, 920, 1013, 1031
Alw21I GWGCWC 1 cut(s) 1064
Alw26I GTCTC 1 cut(s) 995
AoxI GGCC 6 cut(s) 71, 103, 699, 756, 951, 964
ApaI GGGCCC 1 cut(s) 955
ApeKI GCWGC 7 cut(s) 43, 192, 195, 494, 1013, 1025, 1028
ApoI RAATTY 1 cut(s) 564
AseI ATTAAT 1 cut(s) 411
Asp700I GAANNNNTTC 2 cut(s) 298, 392
AspS9I GGNCC 2 cut(s) 951, 952
AsuHPI GGTGA 2 cut(s) 133, 358
BaeGI GKGCMC 1 cut(s) 955
BalI TGGCCA 2 cut(s) 701, 758
BanII GRGCYC 1 cut(s) 955
BarI GAAGNNNNNNTAC 2 cut(s) 671, 703
BbsI GAAGAC 2 cut(s) 515, 689
Bbv12I GWGCWC 1 cut(s) 1064
BbvCI CCTCAGC 1 cut(s) 114
BbvI GCAGC 7 cut(s) 30, 204, 207, 506, 1000, 1012, 1040
BccI CCATC 3 cut(s) 536, 572, 878
BciT130I CCWGG 1 cut(s) 435
BclI TGATCA 2 cut(s) 348, 766
BcoDI GTCTC 1 cut(s) 995
BfaI CTAG 2 cut(s) 249, 893
BfmI CTRYAG 4 cut(s) 30, 627, 1014, 1026
BglI GCCNNNNNGGC 1 cut(s) 959
BisI GCNGC 7 cut(s) 44, 193, 196, 495, 1014, 1026, 1029
BlsI GCNGC 7 cut(s) 45, 194, 197, 496, 1015, 1027, 1030
Bme1390I CCNGG 1 cut(s) 435
BmeRI GACNNNNNGTC 1 cut(s) 180
BmgT120I GGNCC 2 cut(s) 951, 952
BmiI GGNNCC 1 cut(s) 953
BmrFI CCNGG 1 cut(s) 435
BmrI ACTGGG 2 cut(s) 522, 943
BmsI GCATC 2 cut(s) 369, 1184
BmuI ACTGGG 2 cut(s) 522, 943
BpiI GAAGAC 2 cut(s) 515, 689
Bpu10I CCTNAGC 2 cut(s) 114, 284
BsaI GGTCTC 1 cut(s) 995
BsaJI CCNNGG 2 cut(s) 289, 433
Bsc4I CCNNNNNNNGG 1 cut(s) 1000
Bse118I RCCGGY 2 cut(s) 105, 742
Bse1I ACTGG 4 cut(s) 528, 702, 938, 1135
Bse3DI GCAATG 2 cut(s) 270, 849
BseBI CCWGG 1 cut(s) 435
BseDI CCNNGG 2 cut(s) 289, 433
BseGI GGATG 1 cut(s) 583
BseLI CCNNNNNNNGG 1 cut(s) 1000
BseMI GCAATG 2 cut(s) 270, 849
BseMII CTCAG 3 cut(s) 128, 275, 846
BseNI ACTGG 4 cut(s) 528, 702, 938, 1135
BseSI GKGCMC 1 cut(s) 955
BseXI GCAGC 7 cut(s) 30, 204, 207, 506, 1000, 1012, 1040
BshFI GGCC 6 cut(s) 73, 105, 701, 758, 953, 966
BsiHKAI GWGCWC 1 cut(s) 1064
BsiSI CCGG 2 cut(s) 106, 743
BslFI GGGAC 2 cut(s) 79, 732
BslI CCNNNNNNNGG 1 cut(s) 1000
BsmAI GTCTC 1 cut(s) 995
BsmFI GGGAC 2 cut(s) 79, 732
BsmI GAATGC 1 cut(s) 746
BsnI GGCC 6 cut(s) 73, 105, 701, 758, 953, 966
Bso31I GGTCTC 1 cut(s) 995
Bsp120I GGGCCC 1 cut(s) 951
Bsp1286I GDGCHC 2 cut(s) 955, 1064
Bsp1407I TGTACA 1 cut(s) 640
Bsp143I GATC 2 cut(s) 348, 766
BspACI CCGC 4 cut(s) 269, 458, 716, 883
BspANI GGCC 6 cut(s) 73, 105, 701, 758, 953, 966
BspCNI CTCAG 3 cut(s) 127, 276, 845
BspLI GGNNCC 1 cut(s) 953
BspMAI CTGCAG 3 cut(s) 631, 1018, 1030
BspTNI GGTCTC 1 cut(s) 995
BsrDI GCAATG 2 cut(s) 270, 849
BsrFI RCCGGY 2 cut(s) 105, 742
BsrGI TGTACA 1 cut(s) 640
BsrI ACTGG 4 cut(s) 528, 702, 938, 1135
BssAI RCCGGY 2 cut(s) 105, 742
BssECI CCNNGG 2 cut(s) 289, 433
BssMI GATC 2 cut(s) 348, 766
BssT1I CCWWGG 1 cut(s) 289
Bst2UI CCWGG 1 cut(s) 435
Bst4CI ACNGT 6 cut(s) 54, 309, 370, 521, 723, 989
Bst6I CTCTTC 2 cut(s) 94, 740
BstAPI GCANNNNNTGC 1 cut(s) 1022
BstAUI TGTACA 1 cut(s) 640
BstC8I GCNNGC 9 cut(s) 37, 41, 48, 75, 107, 358, 445, 622, 964
BstDEI CTNAG 4 cut(s) 114, 284, 397, 832
BstF5I GGATG 1 cut(s) 583
BstKTI GATC 2 cut(s) 351, 769
BstMAI GTCTC 1 cut(s) 995
BstMBI GATC 2 cut(s) 348, 766
BstMWI GCNNNNNNNGC 4 cut(s) 115, 626, 959, 1022
BstNI CCWGG 1 cut(s) 435
BstNSI RCATGY 3 cut(s) 39, 43, 1138
BstSCI CCNGG 1 cut(s) 433
BstSFI CTRYAG 4 cut(s) 30, 627, 1014, 1026
BstSLI GKGCMC 1 cut(s) 955
BstV1I GCAGC 7 cut(s) 30, 204, 207, 506, 1000, 1012, 1040
BstV2I GAAGAC 2 cut(s) 515, 689
BstXI CCANNNNNNTGG 1 cut(s) 151
BsuRI GGCC 6 cut(s) 73, 105, 701, 758, 953, 966
BtsCI GGATG 1 cut(s) 583
BtsI GCAGTG 2 cut(s) 351, 624
BtsIMutI CAGTG 6 cut(s) 50, 335, 351, 535, 624, 776
Cac8I GCNNGC 9 cut(s) 37, 41, 48, 75, 107, 358, 445, 622, 964
Cfr10I RCCGGY 2 cut(s) 105, 742
Cfr13I GGNCC 2 cut(s) 951, 952
Csp6I GTAC 1 cut(s) 641
CviAII CATG 6 cut(s) 36, 40, 69, 1000, 1135, 1171
CviQI GTAC 1 cut(s) 641
DdeI CTNAG 4 cut(s) 114, 284, 397, 832
DpnI GATC 2 cut(s) 350, 768
DpnII GATC 2 cut(s) 348, 766
DraI TTTAAA 1 cut(s) 864
DriI GACNNNNNGTC 1 cut(s) 180
EaeI YGGCCR 2 cut(s) 699, 756
Eam1104I CTCTTC 2 cut(s) 94, 740
Eam1105I GACNNNNNGTC 1 cut(s) 180
EarI CTCTTC 2 cut(s) 94, 740
Eco130I CCWWGG 1 cut(s) 289
Eco24I GRGCYC 1 cut(s) 955
Eco31I GGTCTC 1 cut(s) 995
EcoO109I RGGNCCY 1 cut(s) 952
EcoRII CCWGG 1 cut(s) 433
EcoT14I CCWWGG 1 cut(s) 289
EcoT22I ATGCAT 2 cut(s) 41, 316
EcoT38I GRGCYC 1 cut(s) 955
ErhI CCWWGG 1 cut(s) 289
FaeI CATG 6 cut(s) 39, 43, 72, 1003, 1138, 1174
FalI AAGNNNNNCTT 2 cut(s) 498, 530
FaqI GGGAC 2 cut(s) 79, 732
FatI CATG 6 cut(s) 35, 39, 68, 999, 1134, 1170
FauI CCCGC 2 cut(s) 262, 709
FauNDI CATATG 1 cut(s) 971
FbaI TGATCA 2 cut(s) 348, 766
Fnu4HI GCNGC 7 cut(s) 44, 193, 196, 495, 1014, 1026, 1029
FokI GGATG 1 cut(s) 590
FriOI GRGCYC 1 cut(s) 955
Fsp4HI GCNGC 7 cut(s) 44, 193, 196, 495, 1014, 1026, 1029
FspBI CTAG 2 cut(s) 249, 893
GluI GCNGC 7 cut(s) 44, 193, 196, 495, 1014, 1026, 1029
HaeIII GGCC 6 cut(s) 73, 105, 701, 758, 953, 966
HapII CCGG 2 cut(s) 106, 743
Hin1II CATG 6 cut(s) 39, 43, 72, 1003, 1138, 1174
HincII GTYRAC 1 cut(s) 1140
HindII GTYRAC 1 cut(s) 1140
HindIII AAGCTT 1 cut(s) 918
HinfI GANTC 4 cut(s) 424, 533, 978, 1034
HpaII CCGG 2 cut(s) 106, 743
HphI GGTGA 2 cut(s) 133, 358
Hpy166II GTNNAC 2 cut(s) 481, 1140
Hpy188I TCNGA 2 cut(s) 165, 186
Hpy188III TCNNGA 5 cut(s) 82, 283, 451, 569, 1107
Hpy8I GTNNAC 2 cut(s) 481, 1140
HpyAV CCTTC 2 cut(s) 610, 1104
HpyCH4III ACNGT 6 cut(s) 54, 309, 370, 521, 723, 989
HpyCH4IV ACGT 1 cut(s) 753
HpyCH4V TGCA 8 cut(s) 39, 314, 356, 494, 629, 818, 1016, 1028
HpyF10VI GCNNNNNNNGC 4 cut(s) 115, 626, 959, 1022
HpyF3I CTNAG 4 cut(s) 114, 284, 397, 832
HpySE526I ACGT 1 cut(s) 753
Hsp92II CATG 6 cut(s) 39, 43, 72, 1003, 1138, 1174
KroI GCCGGC 1 cut(s) 105
KroNI GCCGGC 1 cut(s) 107
Ksp22I TGATCA 2 cut(s) 348, 766
Kzo9I GATC 2 cut(s) 348, 766
Lsp1109I GCAGC 7 cut(s) 30, 204, 207, 506, 1000, 1012, 1040
LweI GCATC 2 cut(s) 369, 1184
MaeI CTAG 2 cut(s) 249, 893
MaeII ACGT 1 cut(s) 753
MaeIII GTNAC 1 cut(s) 333
MalI GATC 2 cut(s) 350, 768
MboI GATC 2 cut(s) 348, 766
MboII GAAGA 8 cut(s) 111, 294, 515, 691, 694, 727, 796, 865
MhlI GDGCHC 2 cut(s) 955, 1064
MlsI TGGCCA 2 cut(s) 701, 758
MluCI AATT 8 cut(s) 145, 214, 241, 388, 408, 564, 663, 995
MluNI TGGCCA 2 cut(s) 701, 758
Mox20I TGGCCA 2 cut(s) 701, 758
Mph1103I ATGCAT 2 cut(s) 41, 316
MroNI GCCGGC 1 cut(s) 105
MroXI GAANNNNTTC 2 cut(s) 298, 392
MscI TGGCCA 2 cut(s) 701, 758
MseI TTAA 4 cut(s) 411, 584, 666, 863
Msp20I TGGCCA 2 cut(s) 701, 758
MspA1I CMGCKG 2 cut(s) 497, 1031
MspI CCGG 2 cut(s) 106, 743
MspR9I CCNGG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 746
MvaI CCWGG 1 cut(s) 435
MwoI GCNNNNNNNGC 4 cut(s) 115, 626, 959, 1022
NaeI GCCGGC 1 cut(s) 107
NdeI CATATG 1 cut(s) 971
NdeII GATC 2 cut(s) 348, 766
NgoMIV GCCGGC 1 cut(s) 105
NlaIII CATG 6 cut(s) 39, 43, 72, 1003, 1138, 1174
NlaIV GGNNCC 1 cut(s) 953
NmeAIII GCCGAG 1 cut(s) 445
NmuCI GTSAC 1 cut(s) 333
NsiI ATGCAT 2 cut(s) 41, 316
NspI RCATGY 3 cut(s) 39, 43, 1138
PaeI GCATGC 2 cut(s) 39, 43
PctI GAATGC 1 cut(s) 746
PdiI GCCGGC 1 cut(s) 107
PdmI GAANNNNTTC 2 cut(s) 298, 392
PfeI GAWTC 4 cut(s) 424, 533, 978, 1034
PflMI CCANNNNNTGG 1 cut(s) 1000
PkrI GCNGC 7 cut(s) 45, 194, 197, 496, 1015, 1027, 1030
PshBI ATTAAT 1 cut(s) 411
PsiI TTATAA 1 cut(s) 221
Psp6I CCWGG 1 cut(s) 433
PspGI CCWGG 1 cut(s) 433
PspN4I GGNNCC 1 cut(s) 953
PspOMI GGGCCC 1 cut(s) 951
PspPI GGNCC 2 cut(s) 951, 952
PstI CTGCAG 3 cut(s) 631, 1018, 1030
PvuII CAGCTG 2 cut(s) 497, 1031
RsaI GTAC 1 cut(s) 642
RsaNI GTAC 1 cut(s) 641
SaqAI TTAA 4 cut(s) 411, 584, 666, 863
SatI GCNGC 7 cut(s) 44, 193, 196, 495, 1014, 1026, 1029
Sau3AI GATC 2 cut(s) 348, 766
Sau96I GGNCC 2 cut(s) 951, 952
ScrFI CCNGG 1 cut(s) 435
SduI GDGCHC 2 cut(s) 955, 1064
SfaNI GCATC 2 cut(s) 369, 1184
SfcI CTRYAG 4 cut(s) 30, 627, 1014, 1026
SphI GCATGC 2 cut(s) 39, 43
Sse9I AATT 8 cut(s) 145, 214, 241, 388, 408, 564, 663, 995
SsiI CCGC 4 cut(s) 269, 458, 716, 883
SspMI CTAG 2 cut(s) 249, 893
StyD4I CCNGG 1 cut(s) 433
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 6 cut(s) 54, 309, 370, 521, 723, 989
TaiI ACGT 1 cut(s) 756
TaqI TCGA 2 cut(s) 93, 1189
TasI AATT 8 cut(s) 145, 214, 241, 388, 408, 564, 663, 995
TatI WGTACW 1 cut(s) 640
TfiI GAWTC 4 cut(s) 424, 533, 978, 1034
Tru1I TTAA 4 cut(s) 411, 584, 666, 863
Tru9I TTAA 4 cut(s) 411, 584, 666, 863
TscAI CASTG 6 cut(s) 57, 342, 358, 535, 631, 776
TseFI GTSAC 1 cut(s) 333
TseI GCWGC 7 cut(s) 43, 192, 195, 494, 1013, 1025, 1028
Tsp45I GTSAC 1 cut(s) 333
TspDTI ATGAA 2 cut(s) 900, 988
TspRI CASTG 6 cut(s) 57, 342, 358, 535, 631, 776
Van91I CCANNNNNTGG 1 cut(s) 1000
VspI ATTAAT 1 cut(s) 411
XapI RAATTY 1 cut(s) 564
XceI RCATGY 3 cut(s) 39, 43, 1138
XmnI GAANNNNTTC 2 cut(s) 298, 392
XspI CTAG 2 cut(s) 249, 893
Zsp2I ATGCAT 2 cut(s) 41, 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.