Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0001090

Physical Location & Seq

Genomic Coordinates Reverse (-)

4382336 .. 4385442

Gene Structure 3107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1061500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ATGTATGTGGTGGAGAGCAAAGGAGGTGCCATAGCATGCATGCTGCTCTCCCTCTTCTTCTTGGGTACATGGCCTGCTATCCTCGCCATGCTAGAAAGACGCGGCCGCCTTCCTCAGCATACGTATCTCGATTACTCAATCACAAACTTCCTGGCTGCTGTACTTATCGCCTTAACATTTGGTCAGATTGGCAGCAGCACGCCTGAGGAGCCGAACTTTTTGACTCAACTTTCGCAGGATAATTGGCCCTGCGTTTTATTCGCGATGGCAGGCGGGGTGGTCCTCAGCATCGGAAATCTTGCCACACAGTATGCTTGGCCTTTTGTTGGTTTGGCAGTGGTAGAAGTGGTTACTTCAAGCATTACAGTTGTCATAGGCACAACATTTAATTACTTCTTGGATGACAAGATTAACAAAGCCGAGATTCTTTTTCCCGGGGTTGCCTGCTTCTTGATCGCGGTTTGTCTTGGCTCCGCTGTTCACTCATCCAATGCAGCAGATAACAAAGCAAAACTTGAAAGCATGGCAACTGATCACGTAGATGGAGAAAAGCCTTCAAATGCTTCCGTAATTCCAAGTGAGGCCGGTTTGAAAGATGTGGAGGGTGGAAATGGTCCTGCTCATAGTGCCAAGGCTGGAACTGCAAAATATCTTGTACAGCTGGAGAACAGAAGATCAATTAAAGTGTTCGGGAAGAACACTTTTATAGGACTTGGCATTACTTTCTTCGCCGGACTTTGCTTCTCTCTCTTCTCACCGGCATTCAACTTGGCCACAAATGATCAATGGCATTTATTGAAGAAAGGAGTTCCTCATTTGGTCGTTTACACTGCGTTTTTCTACTTTTCATTATCTGGTACCGTTGTTGCTGTCATCCTAAACATCATATTCATTTACCGCCCTGCGCTGGGTTCACAGAAGACATCGTTCAGAGCTTATGTTACCGATTGGAATGGTAGGGGATGGGCGCTTTTGGCCGGTGTCCTATGCGGATTCGGCAATGGTCTCCAGTTTATGGGAGGTCAAGCTGCAGGATATGCAGCAGCTGATGCAGTTCAGGCACTTCCGCTCGTGAGCACTTTTTGGGGCATCCTTCTGATGGGAGAGTACCGAAAATCATCACGAAGAACATACGTGTTGCTCTGCAGTATGTTGTTTATGTTTATTTTAGCTGTTGCAATCCTCATGGCGTCATCGGGGCATCGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005274 GO:0005345 GO:0005350 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006206 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008152 GO:0008324 GO:0008655 GO:0009058 GO:0009112 GO:0009507 GO:0009536 GO:0009987 GO:0015075 GO:0015077 GO:0015078 GO:0015205 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015720 GO:0015851 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0018130 GO:0019438 GO:0019856 GO:0022804 GO:0022857 GO:0022890 GO:0034220 GO:0034641 GO:0034654 GO:0042221 GO:0042493 GO:0042886 GO:0042887 GO:0042906 GO:0042907 GO:0043094 GO:0043100 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046112 GO:0046483 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0072527 GO:0072528 GO:0072530 GO:0072531 GO:0098655 GO:0098660 GO:0098662 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ureide_permease

Protein Analysis

404

Amino Acids

43.4

Weight (kDa)

8.74

Isoelectric Point (pI)

33.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ureide_permease	PF07168	41 - 398	3.4e-191	Ureide permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT2G03520 AT2G03530 AT2G03530 AT2G03530 AT2G03530 AT2G03530 AT2G03590 AT2G03590 AT2G03600 AT2G03600 AT2G03600 AT2G03600
fragaria_vesca	FvH4_4g30100 FvH4_4g30100 FvH4_4g30101 FvH4_4g30101 FvH4_4g30101 FvH4_4g30102
malus_domestica	MD16G1061500.v1.1
prunus_persica	Prupe.1G286600_v2.0.a1 Prupe.1G286600_v2.0.a1 Prupe.1G286600_v2.0.a1
pyrus_communis	pycom16g05370
rosa_chinensis	RchiOBHm_Chr4g0438401 RchiOBHm_Chr4g0438411 RchiOBHm_Chr4g0438431
rosa_laevigata	RLG00000006366 RLG00000006367
rosa_multiflora	Rmu_co8316253.1_g000001 Rmu_sc0002327.1_g000024 Rmu_sc0002327.1_g000025 Rmu_sc0019260.1_g000004 Rmu_sc0021561.1_g000001
rosa_roxburghii	Rroxscaffold_5G00379430 Rroxscaffold_5G00379440
rosa_rugosa	Rorug04G0309700 Rorug04G0309800
rosa_samantha	Rh4AG360500 Rh4BG371400 Rh4BG371500 Rh4CG385500 Rh4CG385600 Rh4DG366400 Rh4DG366500 Rh4DG366600
rosa_wichuraiana	Rw0G006510 Rw0G006520 Rw0G006530 Rw0G016460 Rw0G016470 Rw0G016480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	857
AccB1I	GGYRCC	2 cut(s)	26, 857
AccB7I	CCANNNNNTGG	1 cut(s)	1015
AccBSI	CCGCTC	1 cut(s)	1069
AccII	CGCG	3 cut(s)	102, 263, 458
AciI	CCGC	8 cut(s)	102, 106, 273, 458, 474, 898, 990, 1067
AcoI	YGGCCR	3 cut(s)	103, 771, 975
AcyI	GRCGYC	1 cut(s)	1190
AfaI	GTAC	5 cut(s)	67, 162, 657, 859, 1109
AfiI	CCNNNNNNNGG	5 cut(s)	326, 907, 908, 1015, 1099
AflIII	ACRYGT	1 cut(s)	1134
AgsI	TTSAA	6 cut(s)	357, 518, 558, 592, 766, 799
AjnI	CCWGG	1 cut(s)	150
AluBI	AGCT	5 cut(s)	661, 935, 1028, 1046, 1172
AluI	AGCT	5 cut(s)	661, 935, 1028, 1046, 1172
Alw21I	GWGCWC	1 cut(s)	1079
Alw26I	GTCTC	1 cut(s)	1010
AlwNI	CAGNNNCTG	1 cut(s)	1046
Ama87I	CYCGRG	1 cut(s)	434
AoxI	GGCC	7 cut(s)	71, 103, 245, 317, 582, 771, 975
ApeKI	GCWGC	8 cut(s)	43, 155, 192, 195, 494, 1028, 1040, 1043
ArsI	GACNNNNNNTTYG	2 cut(s)	214, 246
Asp718I	GGTACC	1 cut(s)	857
AspLEI	GCGC	2 cut(s)	907, 970
AspS9I	GGNCC	3 cut(s)	246, 280, 614
AsuC2I	CCSGG	2 cut(s)	435, 436
AsuHPI	GGTGA	1 cut(s)	747
AvaI	CYCGRG	1 cut(s)	434
AvaII	GGWCC	2 cut(s)	280, 614
AxyI	CCTNAGG	1 cut(s)	204
BaeI	ACNNNNGTAYC	2 cut(s)	849, 882
BalI	TGGCCA	1 cut(s)	773
BanI	GGYRCC	2 cut(s)	26, 857
BauI	CACGAG	1 cut(s)	1070
BbsI	GAAGAC	1 cut(s)	926
Bbv12I	GWGCWC	1 cut(s)	1079
BbvCI	CCTCAGC	2 cut(s)	114, 284
BbvI	GCAGC	8 cut(s)	30, 142, 204, 207, 506, 1015, 1052, 1055
BccI	CCATC	4 cut(s)	259, 536, 957, 1093
BciT130I	CCWGG	1 cut(s)	152
BclI	TGATCA	2 cut(s)	532, 781
BcnI	CCSGG	2 cut(s)	435, 436
BcoDI	GTCTC	1 cut(s)	1010
BfaI	CTAG	1 cut(s)	92
BfmI	CTRYAG	2 cut(s)	1029, 1144
BfoI	RGCGCY	1 cut(s)	971
Bme1390I	CCNGG	3 cut(s)	152, 435, 436
Bme18I	GGWCC	2 cut(s)	280, 614
BmeT110I	CYCGRG	1 cut(s)	434
BmgT120I	GGNCC	3 cut(s)	246, 280, 614
BmiI	GGNNCC	4 cut(s)	28, 210, 472, 859
BmrFI	CCNGG	3 cut(s)	152, 435, 436
BmsI	GCATC	3 cut(s)	297, 1039, 1098
BpiI	GAAGAC	1 cut(s)	926
BpmI	CTGGAG	2 cut(s)	683, 992
Bpu10I	CCTNAGC	2 cut(s)	114, 284
BpuMI	CCSGG	2 cut(s)	435, 436
BsaAI	YACGTR	3 cut(s)	123, 538, 1135
BsaHI	GRCGYC	1 cut(s)	1190
BsaI	GGTCTC	1 cut(s)	1010
BsaJI	CCNNGG	3 cut(s)	434, 435, 630
Bsc4I	CCNNNNNNNGG	5 cut(s)	326, 907, 908, 1015, 1099
Bse118I	RCCGGY	3 cut(s)	584, 757, 977
Bse1I	ACTGG	1 cut(s)	1009
Bse21I	CCTNAGG	1 cut(s)	204
Bse3DI	GCAATG	1 cut(s)	1006
BseBI	CCWGG	1 cut(s)	152
BseDI	CCNNGG	3 cut(s)	434, 435, 630
BseGI	GGATG	5 cut(s)	406, 485, 873, 968, 1089
BseLI	CCNNNNNNNGG	5 cut(s)	326, 907, 908, 1015, 1099
BseMI	GCAATG	1 cut(s)	1006
BseMII	CTCAG	3 cut(s)	128, 195, 298
BseNI	ACTGG	1 cut(s)	1009
BseRI	GAGGAG	1 cut(s)	221
BseX3I	CGGCCG	1 cut(s)	103
BseXI	GCAGC	8 cut(s)	30, 142, 204, 207, 506, 1015, 1052, 1055
BseYI	CCCAGC	1 cut(s)	907
Bsh1236I	CGCG	3 cut(s)	102, 263, 458
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	7 cut(s)	73, 105, 247, 319, 584, 773, 977
BshNI	GGYRCC	2 cut(s)	26, 857
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	1 cut(s)	1079
BsiHKCI	CYCGRG	1 cut(s)	434
BsiSI	CCGG	5 cut(s)	435, 585, 732, 758, 978
BslI	CCNNNNNNNGG	5 cut(s)	326, 907, 908, 1015, 1099
BsmAI	GTCTC	1 cut(s)	1010
BsmI	GAATGC	1 cut(s)	761
BsnI	GGCC	7 cut(s)	73, 105, 247, 319, 584, 773, 977
Bso31I	GGTCTC	1 cut(s)	1010
BsoBI	CYCGRG	1 cut(s)	434
Bsp1286I	GDGCHC	1 cut(s)	1079
Bsp1407I	TGTACA	1 cut(s)	655
Bsp143I	GATC	4 cut(s)	453, 532, 674, 781
Bsp68I	TCGCGA	1 cut(s)	263
BspACI	CCGC	8 cut(s)	102, 106, 273, 458, 474, 898, 990, 1067
BspANI	GGCC	7 cut(s)	73, 105, 247, 319, 584, 773, 977
BspCNI	CTCAG	3 cut(s)	127, 196, 297
BspFNI	CGCG	3 cut(s)	102, 263, 458
BspLI	GGNNCC	4 cut(s)	28, 210, 472, 859
BspMAI	CTGCAG	2 cut(s)	1033, 1148
BspT107I	GGYRCC	2 cut(s)	26, 857
BspTNI	GGTCTC	1 cut(s)	1010
BsrBI	CCGCTC	1 cut(s)	1069
BsrDI	GCAATG	1 cut(s)	1006
BsrFI	RCCGGY	3 cut(s)	584, 757, 977
BsrGI	TGTACA	1 cut(s)	655
BsrI	ACTGG	1 cut(s)	1009
BssAI	RCCGGY	3 cut(s)	584, 757, 977
BssECI	CCNNGG	3 cut(s)	434, 435, 630
BssMI	GATC	4 cut(s)	453, 532, 674, 781
BssNI	GRCGYC	1 cut(s)	1190
BssSI	CACGAG	1 cut(s)	1070
BssT1I	CCWWGG	1 cut(s)	630
Bst2BI	CACGAG	1 cut(s)	1070
Bst2UI	CCWGG	1 cut(s)	152
Bst4CI	ACNGT	3 cut(s)	309, 367, 862
Bst6I	CTCTTC	2 cut(s)	59, 755
BstACI	GRCGYC	1 cut(s)	1190
BstAPI	GCANNNNNTGC	2 cut(s)	1037, 1049
BstAUI	TGTACA	1 cut(s)	655
BstBAI	YACGTR	3 cut(s)	123, 538, 1135
BstC8I	GCNNGC	6 cut(s)	37, 41, 75, 200, 271, 445
BstDEI	CTNAG	3 cut(s)	114, 204, 284
BstF5I	GGATG	5 cut(s)	406, 485, 873, 968, 1089
BstFNI	CGCG	3 cut(s)	102, 263, 458
BstH2I	RGCGCY	1 cut(s)	971
BstHHI	GCGC	2 cut(s)	907, 970
BstKTI	GATC	4 cut(s)	456, 535, 677, 784
BstMAI	GTCTC	1 cut(s)	1010
BstMBI	GATC	4 cut(s)	453, 532, 674, 781
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	9 cut(s)	83, 208, 626, 641, 974, 996, 1037, 1049, 1058
BstNI	CCWGG	1 cut(s)	152
BstNSI	RCATGY	2 cut(s)	39, 43
BstSCI	CCNGG	3 cut(s)	150, 433, 434
BstSFI	CTRYAG	2 cut(s)	1029, 1144
BstSNI	TACGTA	1 cut(s)	123
BstUI	CGCG	3 cut(s)	102, 263, 458
BstV1I	GCAGC	8 cut(s)	30, 142, 204, 207, 506, 1015, 1052, 1055
BstV2I	GAAGAC	1 cut(s)	926
BstZI	CGGCCG	1 cut(s)	103
Bsu36I	CCTNAGG	1 cut(s)	204
BsuRI	GGCC	7 cut(s)	73, 105, 247, 319, 584, 773, 977
BtgZI	GCGATG	1 cut(s)	278
BtsCI	GGATG	5 cut(s)	406, 485, 873, 968, 1089
BtsI	GCAGTG	2 cut(s)	342, 828
BtsIMutI	CAGTG	2 cut(s)	342, 828
BtuMI	TCGCGA	1 cut(s)	263
Cac8I	GCNNGC	6 cut(s)	37, 41, 75, 200, 271, 445
CaiI	CAGNNNCTG	1 cut(s)	1046
CciNI	GCGGCCGC	1 cut(s)	103
CfoI	GCGC	2 cut(s)	907, 970
Cfr10I	RCCGGY	3 cut(s)	584, 757, 977
Cfr13I	GGNCC	3 cut(s)	246, 280, 614
Cfr9I	CCCGGG	1 cut(s)	434
CseI	GACGC	2 cut(s)	108, 1179
Csp6I	GTAC	5 cut(s)	66, 161, 656, 858, 1108
CviAII	CATG	6 cut(s)	36, 40, 69, 88, 523, 1186
CviQI	GTAC	5 cut(s)	66, 161, 656, 858, 1108
DdeI	CTNAG	3 cut(s)	114, 204, 284
DpnI	GATC	4 cut(s)	455, 534, 676, 783
DpnII	GATC	4 cut(s)	453, 532, 674, 781
EaeI	YGGCCR	3 cut(s)	103, 771, 975
EagI	CGGCCG	1 cut(s)	103
Eam1104I	CTCTTC	2 cut(s)	59, 755
EarI	CTCTTC	2 cut(s)	59, 755
EclXI	CGGCCG	1 cut(s)	103
Eco105I	TACGTA	1 cut(s)	123
Eco130I	CCWWGG	1 cut(s)	630
Eco31I	GGTCTC	1 cut(s)	1010
Eco47I	GGWCC	2 cut(s)	280, 614
Eco52I	CGGCCG	1 cut(s)	103
Eco81I	CCTNAGG	1 cut(s)	204
Eco88I	CYCGRG	1 cut(s)	434
EcoRII	CCWGG	1 cut(s)	150
EcoT14I	CCWWGG	1 cut(s)	630
EcoT22I	ATGCAT	1 cut(s)	41
ErhI	CCWWGG	1 cut(s)	630
FaeI	CATG	6 cut(s)	39, 43, 72, 91, 526, 1189
FalI	AAGNNNNNCTT	2 cut(s)	498, 530
FatI	CATG	6 cut(s)	35, 39, 68, 87, 522, 1185
FauI	CCCGC	1 cut(s)	266
FbaI	TGATCA	2 cut(s)	532, 781
FokI	GGATG	5 cut(s)	413, 472, 860, 975, 1076
FspBI	CTAG	1 cut(s)	92
GlaI	GCGC	2 cut(s)	906, 969
GsaI	CCCAGC	1 cut(s)	911
GsuI	CTGGAG	2 cut(s)	683, 992
HaeII	RGCGCY	1 cut(s)	971
HaeIII	GGCC	7 cut(s)	73, 105, 247, 319, 584, 773, 977
HapII	CCGG	5 cut(s)	435, 585, 732, 758, 978
HgaI	GACGC	2 cut(s)	108, 1179
HhaI	GCGC	2 cut(s)	907, 970
Hin1I	GRCGYC	1 cut(s)	1190
Hin1II	CATG	6 cut(s)	39, 43, 72, 91, 526, 1189
Hin6I	GCGC	2 cut(s)	905, 968
HinP1I	GCGC	2 cut(s)	905, 968
HinfI	GANTC	3 cut(s)	223, 424, 993
HpaII	CCGG	5 cut(s)	435, 585, 732, 758, 978
HphI	GGTGA	1 cut(s)	747
Hpy166II	GTNNAC	3 cut(s)	481, 826, 914
Hpy188I	TCNGA	5 cut(s)	186, 293, 932, 1098, 1206
Hpy188III	TCNNGA	6 cut(s)	128, 262, 451, 691, 1072, 1122
Hpy8I	GTNNAC	3 cut(s)	481, 826, 914
HpyAV	CCTTC	3 cut(s)	119, 564, 1103
HpyCH4III	ACNGT	3 cut(s)	309, 367, 862
HpyCH4IV	ACGT	3 cut(s)	122, 537, 1134
HpyCH4V	TGCA	8 cut(s)	39, 494, 644, 1031, 1040, 1052, 1146, 1178
HpyF10VI	GCNNNNNNNGC	9 cut(s)	83, 208, 626, 641, 974, 996, 1037, 1049, 1058
HpyF3I	CTNAG	3 cut(s)	114, 204, 284
HpySE526I	ACGT	3 cut(s)	122, 537, 1134
Hsp92I	GRCGYC	1 cut(s)	1190
Hsp92II	CATG	6 cut(s)	39, 43, 72, 91, 526, 1189
HspAI	GCGC	2 cut(s)	905, 968
KpnI	GGTACC	1 cut(s)	861
Ksp22I	TGATCA	2 cut(s)	532, 781
Kzo9I	GATC	4 cut(s)	453, 532, 674, 781
LmnI	GCTCC	2 cut(s)	208, 476
Lsp1109I	GCAGC	8 cut(s)	30, 142, 204, 207, 506, 1015, 1052, 1055
LweI	GCATC	3 cut(s)	297, 1039, 1098
MaeI	CTAG	1 cut(s)	92
MaeII	ACGT	3 cut(s)	122, 537, 1134
MaeIII	GTNAC	2 cut(s)	349, 940
MalI	GATC	4 cut(s)	455, 534, 676, 783
MbiI	CCGCTC	1 cut(s)	1069
MboI	GATC	4 cut(s)	453, 532, 674, 781
MboII	GAAGA	9 cut(s)	46, 49, 684, 706, 718, 742, 811, 931, 1137
MhlI	GDGCHC	1 cut(s)	1079
MlsI	TGGCCA	1 cut(s)	773
MluCI	AATT	4 cut(s)	241, 388, 570, 678
MluNI	TGGCCA	1 cut(s)	773
MlyI	GAGTC	1 cut(s)	217
Mox20I	TGGCCA	1 cut(s)	773
Mph1103I	ATGCAT	1 cut(s)	41
MscI	TGGCCA	1 cut(s)	773
MseI	TTAA	4 cut(s)	173, 387, 411, 681
MslI	CAYNNNNRTG	1 cut(s)	540
Msp20I	TGGCCA	1 cut(s)	773
MspA1I	CMGCKG	3 cut(s)	476, 661, 1046
MspI	CCGG	5 cut(s)	435, 585, 732, 758, 978
MspR9I	CCNGG	3 cut(s)	152, 435, 436
Mva1269I	GAATGC	1 cut(s)	761
MvaI	CCWGG	1 cut(s)	152
MvnI	CGCG	3 cut(s)	102, 263, 458
MwoI	GCNNNNNNNGC	9 cut(s)	83, 208, 626, 641, 974, 996, 1037, 1049, 1058
NciI	CCSGG	2 cut(s)	435, 436
NdeII	GATC	4 cut(s)	453, 532, 674, 781
NlaIII	CATG	6 cut(s)	39, 43, 72, 91, 526, 1189
NlaIV	GGNNCC	4 cut(s)	28, 210, 472, 859
NmeAIII	GCCGAG	1 cut(s)	445
NotI	GCGGCCGC	1 cut(s)	103
NruI	TCGCGA	1 cut(s)	263
NsiI	ATGCAT	1 cut(s)	41
NspI	RCATGY	2 cut(s)	39, 43
PaeI	GCATGC	2 cut(s)	39, 43
PctI	GAATGC	1 cut(s)	761
PfeI	GAWTC	2 cut(s)	424, 993
PflMI	CCANNNNNTGG	1 cut(s)	1015
PleI	GAGTC	1 cut(s)	217
PpsI	GAGTC	1 cut(s)	217
Ppu21I	YACGTR	3 cut(s)	123, 538, 1135
Psp6I	CCWGG	1 cut(s)	150
PspFI	CCCAGC	1 cut(s)	907
PspGI	CCWGG	1 cut(s)	150
PspN4I	GGNNCC	4 cut(s)	28, 210, 472, 859
PspPI	GGNCC	3 cut(s)	246, 280, 614
PstI	CTGCAG	2 cut(s)	1033, 1148
PstNI	CAGNNNCTG	1 cut(s)	1046
PvuII	CAGCTG	2 cut(s)	661, 1046
RruI	TCGCGA	1 cut(s)	263
RsaI	GTAC	5 cut(s)	67, 162, 657, 859, 1109
RsaNI	GTAC	5 cut(s)	66, 161, 656, 858, 1108
RseI	CAYNNNNRTG	1 cut(s)	540
SaqAI	TTAA	4 cut(s)	173, 387, 411, 681
Sau3AI	GATC	4 cut(s)	453, 532, 674, 781
Sau96I	GGNCC	3 cut(s)	246, 280, 614
SchI	GAGTC	1 cut(s)	217
ScrFI	CCNGG	3 cut(s)	152, 435, 436
SduI	GDGCHC	1 cut(s)	1079
SfaNI	GCATC	3 cut(s)	297, 1039, 1098
SfcI	CTRYAG	2 cut(s)	1029, 1144
SinI	GGWCC	2 cut(s)	280, 614
SmaI	CCCGGG	1 cut(s)	436
SmiMI	CAYNNNNRTG	1 cut(s)	540
SnaBI	TACGTA	1 cut(s)	123
SphI	GCATGC	2 cut(s)	39, 43
Sse9I	AATT	4 cut(s)	241, 388, 570, 678
SsiI	CCGC	8 cut(s)	102, 106, 273, 458, 474, 898, 990, 1067
SspMI	CTAG	1 cut(s)	92
StyD4I	CCNGG	3 cut(s)	150, 433, 434
StyI	CCWWGG	1 cut(s)	630
TaaI	ACNGT	3 cut(s)	309, 367, 862
TaiI	ACGT	3 cut(s)	125, 540, 1137
TaqI	TCGA	1 cut(s)	129
TasI	AATT	4 cut(s)	241, 388, 570, 678
TatI	WGTACW	2 cut(s)	160, 655
TauI	GCSGC	2 cut(s)	105, 108
TfiI	GAWTC	2 cut(s)	424, 993
Tru1I	TTAA	4 cut(s)	173, 387, 411, 681
Tru9I	TTAA	4 cut(s)	173, 387, 411, 681
TscAI	CASTG	2 cut(s)	342, 835
TseI	GCWGC	8 cut(s)	43, 155, 192, 195, 494, 1028, 1040, 1043
TspDTI	ATGAA	2 cut(s)	837, 880
TspGWI	ACGGA	1 cut(s)	556
TspMI	CCCGGG	1 cut(s)	434
TspRI	CASTG	2 cut(s)	342, 835
Van91I	CCANNNNNTGG	1 cut(s)	1015
VpaK11BI	GGWCC	2 cut(s)	280, 614
XceI	RCATGY	2 cut(s)	39, 43
XmaI	CCCGGG	1 cut(s)	434
XspI	CTAG	1 cut(s)	92
Zsp2I	ATGCAT	1 cut(s)	41

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.