Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001090

Physical Location & Seq

Genomic Coordinates Forward (+)

48515736 .. 48522604

Gene Structure 6869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0309800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGCAAAAGGCTTTAAGTCGAGGGAAAGAAGAAGAAGAATAGCAGATTTTCCTCTTAGTTCGTTGTTCAATGGAGGAAATGAGGGCTCTCCTTCCACCCCTCATGATGTTGTGATTGTTCAAAACATCAACAATCAAAGGTATCAACCAAGTCAGAATTATAACAGGGGACTAGTTTCATTGAACAGTCAGAAAGGGAATGACATTGGTAACAAAAGCAAGGCGGCAATCCAACTGGTGCAGGTGCAAGAACCTGATTTCTGTGGCGTGGAGGGCCAAGATCAAACTATGGTTAATGTTTCTCTAGCTCAGGAAAATCGAGTCTCGTCTCTTATCGAACCTAGTGGGTTTCTCGTGTCGGGCTCATCCGAGCGGCGTGTGGAAGCAGCAGTAGCTTTAAATTCTACAGGTACAGATGATGCAACCGTGGCCTCCATTCTCTCGAAGAAGCAGAAGCAAAAGCAGAAGCAGAAAACCACCAGGCTCTCCGACCTCCGAACCTCCAGAACCCACATCAACAACCTTCCTAAGCTCCTCTCCTACGTCACACCAACCTCGTTGCCTCAGTACGTCGTCGAATCAAACTACCGATTACACCCATCGATCGTCATCTCACCTACATCTACCCAAAACTCAATCACTTTCTCACCCATCCTTGCTGAGAACAGAGAAGTCAGACATGGCCACGGGATAGAAGCCATTGATATTCTCATCTCCATTCTAGTATCAAAAATCAAAGGTATGGAATTGAGGAAAGATGAGGAGTGGAGCTGGATTTTGATCGAAAAACTCTGGCAAGTGAAAGTTTCTATTTGGATTCAATTGGAGTTATTAAAGGGAATTGGTGTTGTGGTAGAGTTGTCCGGAACATTCTTCAAACTCTCGAGTGGGCAATTGGTGTTGAGTCTGAAATTGGAAGGGCGTGAGAAAATGTCAAAGAAGATTCCCGATTCTGCCATATTCATGATGAGAATGTGTCTAAATGTTACTTACTCCTTCTCCTTGTCTATTTTTCTAGATAATGTGAATGATAGAATTCGTCATAGATTCTTTGGATTCATCAATCAGCAGATTAGTGAAGCTCTTGAGCAGAAGCAGAAGTATGCGGCTTGGAAAGCAGCAGATATAAGGAAAGCTGTGAAAGAAGGAAGGAAACCTCAGGCTGGCCCCCCTGCTGGTGATGATGATCTTTCAGTTCCCTCGAGTACAACTAGTGGTTCATATGAAAGAATACAACTTGAGACATCAAGGCTGTATCGGCAGGCTGAGGTTAATCCAATTGCAGCTTGTTTACCAACTCTGGCCACAATACCAATCTGGATAGGTCTATACCAAACTCTTTCGAATGTGGCAAATGAGATAGCATTGGAGGGCAGAACTTCAAGTTGCAATGAGTTAAAGGTTGTCACTTTTGGTAGTCGAAAATACAAGAAAGCTAAGATGCTAAAGAATTTGTTCAAGAAATTGTCCAACCATCAATGTAGATTTTATAAGAGGCCTGTTTTAGAACAACTTGTATTTGTATCAGCTTTTGTTGTCCCAAGTAGATGGGCATCCATTGAATGCTTTTCTTCTTTCAATGTTGGCTTGGATGATTGGGAAATCCTCCATTTTAAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005274 GO:0005345 GO:0005350 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006206 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008152 GO:0008324 GO:0008655 GO:0009058 GO:0009112 GO:0009507 GO:0009536 GO:0009987 GO:0015075 GO:0015077 GO:0015078 GO:0015205 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015720 GO:0015851 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0018130 GO:0019438 GO:0019856 GO:0022804 GO:0022857 GO:0022890 GO:0034220 GO:0034641 GO:0034654 GO:0042221 GO:0042493 GO:0042886 GO:0042887 GO:0042906 GO:0042907 GO:0043094 GO:0043100 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046112 GO:0046483 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0072527 GO:0072528 GO:0072530 GO:0072531 GO:0098655 GO:0098660 GO:0098662 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ureide_permease

Protein Analysis

540

Amino Acids

60.67

Weight (kDa)

9.58

Isoelectric Point (pI)

43.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
60KD_IMP	PF02096	409 - 492	7.8e-11	60Kd inner membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT2G03520 AT2G03530 AT2G03530 AT2G03530 AT2G03530 AT2G03530 AT2G03590 AT2G03590 AT2G03600 AT2G03600 AT2G03600 AT2G03600
fragaria_vesca	FvH4_4g30100 FvH4_4g30100 FvH4_4g30101 FvH4_4g30101 FvH4_4g30101 FvH4_4g30102
malus_domestica	MD16G1061500.v1.1
prunus_persica	Prupe.1G286600_v2.0.a1 Prupe.1G286600_v2.0.a1 Prupe.1G286600_v2.0.a1
pyrus_communis	pycom16g05370
rosa_chinensis	RchiOBHm_Chr4g0438401 RchiOBHm_Chr4g0438411 RchiOBHm_Chr4g0438431
rosa_laevigata	RLG00000006366 RLG00000006367
rosa_multiflora	Rmu_co8316253.1_g000001 Rmu_sc0002327.1_g000024 Rmu_sc0002327.1_g000025 Rmu_sc0019260.1_g000004 Rmu_sc0021561.1_g000001
rosa_roxburghii	Rroxscaffold_5G00379430 Rroxscaffold_5G00379440
rosa_rugosa	Rorug04G0309700 Rorug04G0309800
rosa_samantha	Rh4AG360500 Rh4BG371400 Rh4BG371500 Rh4CG385500 Rh4CG385600 Rh4DG366400 Rh4DG366500 Rh4DG366600
rosa_wichuraiana	Rw0G006510 Rw0G006520 Rw0G006530 Rw0G016460 Rw0G016470 Rw0G016480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	162, 1491
AarI	CACCTGC	1 cut(s)	232
Acc36I	ACCTGC	1 cut(s)	232
AccBSI	CCGCTC	1 cut(s)	373
AccIII	TCCGGA	1 cut(s)	863
AciI	CCGC	3 cut(s)	224, 373, 1106
AcoI	YGGCCR	2 cut(s)	682, 1302
AcsI	RAATTY	3 cut(s)	400, 1035, 1450
AfaI	GTAC	3 cut(s)	412, 569, 1207
AfiI	CCNNNNNNNGG	2 cut(s)	1163, 1175
AgsI	TTSAA	9 cut(s)	70, 122, 184, 821, 877, 1383, 1459, 1562, 1579
AhlI	ACTAGT	2 cut(s)	172, 1211
AjnI	CCWGG	1 cut(s)	479
AluBI	AGCT	9 cut(s)	308, 395, 532, 771, 1082, 1136, 1286, 1436, 1529
AluI	AGCT	9 cut(s)	308, 395, 532, 771, 1082, 1136, 1286, 1436, 1529
Alw26I	GTCTC	3 cut(s)	328, 333, 1235
Ama87I	CYCGRG	2 cut(s)	883, 1201
Aor13HI	TCCGGA	1 cut(s)	863
AoxI	GGCC	6 cut(s)	274, 429, 682, 1165, 1302, 1496
ApeKI	GCWGC	3 cut(s)	386, 1118, 1283
ApoI	RAATTY	3 cut(s)	400, 1035, 1450
Asp700I	GAANNNNTTC	1 cut(s)	1454
AspS9I	GGNCC	2 cut(s)	274, 1166
AsuHPI	GGTGA	3 cut(s)	606, 639, 1190
AsuII	TTCGAA	1 cut(s)	1343
AvaI	CYCGRG	2 cut(s)	883, 1201
AxyI	CCTNAGG	1 cut(s)	1158
BalI	TGGCCA	2 cut(s)	684, 1304
BanII	GRGCYC	2 cut(s)	89, 365
BauI	CACGAG	1 cut(s)	353
BbvCI	CCTCAGC	1 cut(s)	1266
BbvI	GCAGC	3 cut(s)	398, 1130, 1295
BccI	CCATC	4 cut(s)	607, 659, 1482, 1542
BciT130I	CCWGG	1 cut(s)	481
BcoDI	GTCTC	3 cut(s)	328, 333, 1235
BcuI	ACTAGT	2 cut(s)	172, 1211
BfaI	CTAG	6 cut(s)	173, 305, 342, 722, 1016, 1212
BfmI	CTRYAG	1 cut(s)	405
BfuAI	ACCTGC	1 cut(s)	232
BisI	GCNGC	6 cut(s)	225, 374, 387, 1107, 1119, 1284
BlsI	GCNGC	6 cut(s)	226, 375, 388, 1108, 1120, 1285
Bme1390I	CCNGG	1 cut(s)	481
BmeT110I	CYCGRG	2 cut(s)	883, 1201
BmgT120I	GGNCC	2 cut(s)	274, 1166
BmiI	GGNNCC	1 cut(s)	1168
BmrFI	CCNGG	1 cut(s)	481
BmsI	GCATC	3 cut(s)	409, 1431, 1562
BpmI	CTGGAG	1 cut(s)	487
Bpu10I	CCTNAGC	3 cut(s)	309, 528, 1266
Bpu14I	TTCGAA	1 cut(s)	1343
BpuEI	CTTGAG	2 cut(s)	1106, 1259
Bsa29I	ATCGAT	1 cut(s)	602
BsaBI	GATNNNNATC	4 cut(s)	608, 779, 1185, 1552
BsaJI	CCNNGG	2 cut(s)	426, 685
BsaWI	WCCGGW	1 cut(s)	863
BsaXI	ACNNNNNCTCC	2 cut(s)	983, 1013
Bsc4I	CCNNNNNNNGG	2 cut(s)	1163, 1175
Bse1I	ACTGG	1 cut(s)	240
Bse21I	CCTNAGG	1 cut(s)	1158
Bse3DI	GCAATG	1 cut(s)	1396
Bse8I	GATNNNNATC	4 cut(s)	608, 779, 1185, 1552
BseAI	TCCGGA	1 cut(s)	863
BseBI	CCWGG	1 cut(s)	481
BseCI	ATCGAT	1 cut(s)	602
BseDI	CCNNGG	2 cut(s)	426, 685
BseGI	GGATG	4 cut(s)	365, 651, 1553, 1597
BseJI	GATNNNNATC	4 cut(s)	608, 779, 1185, 1552
BseLI	CCNNNNNNNGG	2 cut(s)	1163, 1175
BseMI	GCAATG	1 cut(s)	1396
BseMII	CTCAG	5 cut(s)	323, 578, 651, 1172, 1257
BseNI	ACTGG	1 cut(s)	240
BseRI	GAGGAG	2 cut(s)	524, 776
BseXI	GCAGC	3 cut(s)	398, 1130, 1295
BsgI	GTGCAG	1 cut(s)	260
Bsh1285I	CGRYCG	1 cut(s)	606
BshFI	GGCC	6 cut(s)	276, 431, 684, 1167, 1304, 1498
BshVI	ATCGAT	1 cut(s)	602
BsiEI	CGRYCG	1 cut(s)	606
BsiHKCI	CYCGRG	2 cut(s)	883, 1201
BsiSI	CCGG	1 cut(s)	864
BslFI	GGGAC	2 cut(s)	183, 1523
BslI	CCNNNNNNNGG	2 cut(s)	1163, 1175
BsmAI	GTCTC	3 cut(s)	328, 333, 1235
BsmBI	CGTCTC	1 cut(s)	333
BsmFI	GGGAC	2 cut(s)	183, 1523
BsmI	GAATGC	1 cut(s)	1568
BsnI	GGCC	6 cut(s)	276, 431, 684, 1167, 1304, 1498
BsoBI	CYCGRG	2 cut(s)	883, 1201
Bsp119I	TTCGAA	1 cut(s)	1343
Bsp1286I	GDGCHC	2 cut(s)	89, 365
Bsp13I	TCCGGA	1 cut(s)	863
Bsp143I	GATC	4 cut(s)	280, 603, 780, 1186
BspACI	CCGC	3 cut(s)	224, 373, 1106
BspANI	GGCC	6 cut(s)	276, 431, 684, 1167, 1304, 1498
BspCNI	CTCAG	5 cut(s)	322, 577, 652, 1171, 1258
BspDI	ATCGAT	1 cut(s)	602
BspEI	TCCGGA	1 cut(s)	863
BspHI	TCATGA	2 cut(s)	103, 963
BspLI	GGNNCC	1 cut(s)	1168
BspMI	ACCTGC	1 cut(s)	232
BspT104I	TTCGAA	1 cut(s)	1343
BsrBI	CCGCTC	1 cut(s)	373
BsrDI	GCAATG	1 cut(s)	1396
BsrI	ACTGG	1 cut(s)	240
BssECI	CCNNGG	2 cut(s)	426, 685
BssMI	GATC	4 cut(s)	280, 603, 780, 1186
BssSI	CACGAG	1 cut(s)	353
Bst2BI	CACGAG	1 cut(s)	353
Bst2UI	CCWGG	1 cut(s)	481
Bst4CI	ACNGT	2 cut(s)	188, 427
BstBI	TTCGAA	1 cut(s)	1343
BstC8I	GCNNGC	2 cut(s)	1165, 1263
BstDEI	CTNAG	8 cut(s)	56, 309, 528, 564, 660, 1158, 1266, 1437
BstDSI	CCRYGG	2 cut(s)	426, 685
BstF5I	GGATG	4 cut(s)	365, 651, 1553, 1597
BstKTI	GATC	4 cut(s)	283, 606, 783, 1189
BstMAI	GTCTC	3 cut(s)	328, 333, 1235
BstMBI	GATC	4 cut(s)	280, 603, 780, 1186
BstMCI	CGRYCG	1 cut(s)	606
BstMWI	GCNNNNNNNGC	5 cut(s)	273, 392, 428, 1115, 1258
BstNI	CCWGG	1 cut(s)	481
BstSCI	CCNGG	1 cut(s)	479
BstSFI	CTRYAG	1 cut(s)	405
BstV1I	GCAGC	3 cut(s)	398, 1130, 1295
BstXI	CCANNNNNNTGG	1 cut(s)	1548
Bsu15I	ATCGAT	1 cut(s)	602
Bsu36I	CCTNAGG	1 cut(s)	1158
BsuRI	GGCC	6 cut(s)	276, 431, 684, 1167, 1304, 1498
BsuTUI	ATCGAT	1 cut(s)	602
BtgI	CCRYGG	2 cut(s)	426, 685
BtsCI	GGATG	4 cut(s)	365, 651, 1553, 1597
BveI	ACCTGC	1 cut(s)	232
Cac8I	GCNNGC	2 cut(s)	1165, 1263
CciI	TCATGA	2 cut(s)	103, 963
Cfr13I	GGNCC	2 cut(s)	274, 1166
ClaI	ATCGAT	1 cut(s)	602
Csp6I	GTAC	3 cut(s)	411, 568, 1206
CviAII	CATG	3 cut(s)	104, 680, 964
CviQI	GTAC	3 cut(s)	411, 568, 1206
DdeI	CTNAG	8 cut(s)	56, 309, 528, 564, 660, 1158, 1266, 1437
DpnI	GATC	4 cut(s)	282, 605, 782, 1188
DpnII	GATC	4 cut(s)	280, 603, 780, 1186
DraI	TTTAAA	2 cut(s)	399, 1615
EaeI	YGGCCR	2 cut(s)	682, 1302
Eco147I	AGGCCT	1 cut(s)	1498
Eco24I	GRGCYC	2 cut(s)	89, 365
Eco81I	CCTNAGG	1 cut(s)	1158
Eco88I	CYCGRG	2 cut(s)	883, 1201
EcoRI	GAATTC	1 cut(s)	1035
EcoRII	CCWGG	1 cut(s)	479
EcoT38I	GRGCYC	2 cut(s)	89, 365
Esp3I	CGTCTC	1 cut(s)	333
FaeI	CATG	3 cut(s)	107, 683, 967
FaqI	GGGAC	2 cut(s)	183, 1523
FatI	CATG	3 cut(s)	103, 679, 963
FauNDI	CATATG	1 cut(s)	1222
Fnu4HI	GCNGC	6 cut(s)	225, 374, 387, 1107, 1119, 1284
FokI	GGATG	4 cut(s)	352, 638, 1540, 1604
FriOI	GRGCYC	2 cut(s)	89, 365
Fsp4HI	GCNGC	6 cut(s)	225, 374, 387, 1107, 1119, 1284
FspBI	CTAG	6 cut(s)	173, 305, 342, 722, 1016, 1212
GluI	GCNGC	6 cut(s)	225, 374, 387, 1107, 1119, 1284
GsuI	CTGGAG	1 cut(s)	487
HaeIII	GGCC	6 cut(s)	276, 431, 684, 1167, 1304, 1498
HapII	CCGG	1 cut(s)	864
Hin1II	CATG	3 cut(s)	107, 683, 967
HinfI	GANTC	8 cut(s)	321, 578, 817, 904, 943, 950, 1047, 1056
HpaII	CCGG	1 cut(s)	864
HphI	GGTGA	3 cut(s)	606, 639, 1190
Hpy166II	GTNNAC	1 cut(s)	1292
Hpy188I	TCNGA	7 cut(s)	156, 192, 370, 490, 497, 677, 909
Hpy8I	GTNNAC	1 cut(s)	1292
Hpy99I	CGWCG	2 cut(s)	575, 578
HpyAV	CCTTC	6 cut(s)	102, 533, 911, 1006, 1139, 1143
HpyCH4III	ACNGT	2 cut(s)	188, 427
HpyCH4IV	ACGT	2 cut(s)	543, 570
HpyCH4V	TGCA	5 cut(s)	241, 247, 422, 1283, 1389
HpyF10VI	GCNNNNNNNGC	5 cut(s)	273, 392, 428, 1115, 1258
HpyF3I	CTNAG	8 cut(s)	56, 309, 528, 564, 660, 1158, 1266, 1437
HpySE526I	ACGT	2 cut(s)	543, 570
Hsp92II	CATG	3 cut(s)	107, 683, 967
Kpn2I	TCCGGA	1 cut(s)	863
Kzo9I	GATC	4 cut(s)	280, 603, 780, 1186
LmnI	GCTCC	2 cut(s)	537, 768
Lsp1109I	GCAGC	3 cut(s)	398, 1130, 1295
LweI	GCATC	3 cut(s)	409, 1431, 1562
MaeI	CTAG	6 cut(s)	173, 305, 342, 722, 1016, 1212
MaeII	ACGT	2 cut(s)	543, 570
MaeIII	GTNAC	4 cut(s)	209, 544, 985, 1405
MalI	GATC	4 cut(s)	282, 605, 782, 1188
MbiI	CCGCTC	1 cut(s)	373
MboI	GATC	4 cut(s)	280, 603, 780, 1186
MboII	GAAGA	7 cut(s)	42, 45, 48, 457, 865, 952, 1563
MfeI	CAATTG	3 cut(s)	821, 893, 1278
MhlI	GDGCHC	2 cut(s)	89, 365
MlsI	TGGCCA	2 cut(s)	684, 1304
MluNI	TGGCCA	2 cut(s)	684, 1304
MlyI	GAGTC	2 cut(s)	330, 913
MmeI	TCCRAC	3 cut(s)	256, 513, 1494
Mox20I	TGGCCA	2 cut(s)	684, 1304
MroI	TCCGGA	1 cut(s)	863
MroXI	GAANNNNTTC	1 cut(s)	1454
MscI	TGGCCA	2 cut(s)	684, 1304
MseI	TTAA	7 cut(s)	15, 294, 398, 833, 1272, 1397, 1614
MslI	CAYNNNNRTG	1 cut(s)	962
Msp20I	TGGCCA	2 cut(s)	684, 1304
MspI	CCGG	1 cut(s)	864
MspR9I	CCNGG	1 cut(s)	481
MunI	CAATTG	3 cut(s)	821, 893, 1278
Mva1269I	GAATGC	1 cut(s)	1568
MvaI	CCWGG	1 cut(s)	481
MwoI	GCNNNNNNNGC	5 cut(s)	273, 392, 428, 1115, 1258
NdeI	CATATG	1 cut(s)	1222
NdeII	GATC	4 cut(s)	280, 603, 780, 1186
NlaIII	CATG	3 cut(s)	107, 683, 967
NlaIV	GGNNCC	1 cut(s)	1168
NmuCI	GTSAC	2 cut(s)	544, 1405
NspV	TTCGAA	1 cut(s)	1343
PaeR7I	CTCGAG	2 cut(s)	883, 1201
PagI	TCATGA	2 cut(s)	103, 963
PaqCI	CACCTGC	1 cut(s)	232
PceI	AGGCCT	1 cut(s)	1498
PctI	GAATGC	1 cut(s)	1568
PdmI	GAANNNNTTC	1 cut(s)	1454
PfeI	GAWTC	6 cut(s)	578, 817, 943, 950, 1047, 1056
PkrI	GCNGC	6 cut(s)	226, 375, 388, 1108, 1120, 1285
Ple19I	CGATCG	1 cut(s)	606
PleI	GAGTC	2 cut(s)	329, 912
PpsI	GAGTC	2 cut(s)	329, 912
PsiI	TTATAA	2 cut(s)	162, 1491
Psp6I	CCWGG	1 cut(s)	479
PspGI	CCWGG	1 cut(s)	479
PspN4I	GGNNCC	1 cut(s)	1168
PspPI	GGNCC	2 cut(s)	274, 1166
PspXI	VCTCGAGB	1 cut(s)	1201
PvuI	CGATCG	1 cut(s)	606
RsaI	GTAC	3 cut(s)	412, 569, 1207
RsaNI	GTAC	3 cut(s)	411, 568, 1206
RseI	CAYNNNNRTG	1 cut(s)	962
SaqAI	TTAA	7 cut(s)	15, 294, 398, 833, 1272, 1397, 1614
SatI	GCNGC	6 cut(s)	225, 374, 387, 1107, 1119, 1284
Sau3AI	GATC	4 cut(s)	280, 603, 780, 1186
Sau96I	GGNCC	2 cut(s)	274, 1166
SchI	GAGTC	2 cut(s)	330, 913
ScrFI	CCNGG	1 cut(s)	481
SduI	GDGCHC	2 cut(s)	89, 365
SfaNI	GCATC	3 cut(s)	409, 1431, 1562
SfcI	CTRYAG	1 cut(s)	405
Sfr274I	CTCGAG	2 cut(s)	883, 1201
SfuI	TTCGAA	1 cut(s)	1343
SlaI	CTCGAG	2 cut(s)	883, 1201
SmiMI	CAYNNNNRTG	1 cut(s)	962
SmlI	CTYRAG	4 cut(s)	883, 1085, 1201, 1238
SmoI	CTYRAG	4 cut(s)	883, 1085, 1201, 1238
SpeI	ACTAGT	2 cut(s)	172, 1211
SseBI	AGGCCT	1 cut(s)	1498
SsiI	CCGC	3 cut(s)	224, 373, 1106
SspMI	CTAG	6 cut(s)	173, 305, 342, 722, 1016, 1212
StuI	AGGCCT	1 cut(s)	1498
StyD4I	CCNGG	1 cut(s)	479
TaaI	ACNGT	2 cut(s)	188, 427
TaiI	ACGT	2 cut(s)	546, 573
TatI	WGTACW	1 cut(s)	1205
TauI	GCSGC	3 cut(s)	227, 376, 1109
TfiI	GAWTC	6 cut(s)	578, 817, 943, 950, 1047, 1056
Tru1I	TTAA	7 cut(s)	15, 294, 398, 833, 1272, 1397, 1614
Tru9I	TTAA	7 cut(s)	15, 294, 398, 833, 1272, 1397, 1614
TseFI	GTSAC	2 cut(s)	544, 1405
TseI	GCWGC	3 cut(s)	386, 1118, 1283
Tsp45I	GTSAC	2 cut(s)	544, 1405
TspDTI	ATGAA	5 cut(s)	168, 952, 1048, 1209, 1239
XapI	RAATTY	3 cut(s)	400, 1035, 1450
XbaI	TCTAGA	1 cut(s)	1015
XhoI	CTCGAG	2 cut(s)	883, 1201
XmnI	GAANNNNTTC	1 cut(s)	1454
XspI	CTAG	6 cut(s)	173, 305, 342, 722, 1016, 1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.