Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0001090

Physical Location & Seq

Genomic Coordinates Reverse (-)

52857009 .. 52860194

Gene Structure 3186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG371500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGTATGTGGTGGAAAGCAAAGGAGGTGCCATAGCATGCATGCTGCTGGCCTTGCTCTTCTTGGGGACATGGCCTGCTATCCTGACTATGCTCGAAAGAAGAGGCCGACTTCCTCAGCATACTTATCTGGATTATTCGATCACCAATTTCTTGGCTGCTATCCTTATTGCTTTGACATTTGGTCAGATAGGGAGTAGCACAGCTGAGGAGCCCAATTTTATAACTCAACTTTTGCAGTTGCCGGAGAATTGGCCCTGTGTTTTATTTGCAATGGCGGGTGGGATATTCCTGAGCCTTGGGAATCTTTCTTCACAGTATGCATTTGCTTTAGTCGGTTTGTCGGTGACAGAAGTGATCACTGCAAGCATCACAGTTGTCATAGGCACTACCTTGAATTACTTCTTAGATGACAAAATAAACAGCGCTGATATTCTTTTTCCTGGTGTTGCTTGCTTCTTGATTGCGGTTTGTCTTGGCTCTGCTGTTCACTCATCCAATGCAGCTGATAACAAAGTAAAACTTGACAATTTGCCAAGTGATCCAGAAGACGGAGAAAAGCTTTCAAGTGTGATTCCAAATAAGGAAGGGAAGGACCTGGAGACCGGAAATGATTATGCTGAGAAAGCGAAGGCTGGGACTGCAGATTTTCTTGTGAAGCTTGAGAACCAAAGAGCAATTAAGGTTTTTGGGAAGAGCATTTTTATTGGATTGACCATAACTTTCTTTGCTGGAATTTGCTTCTCTCTCTTCTCACCTTCATTCAACTTGGCCACAAATGATCAGTGGAACACTCTAAAGGAAGGAGTTCCTGATTTGGTTGTCTATACTGCGTTTTTCTACTTCTCAGCATCTTGTTTCGTCATTGCCATCATTCTAAATATCACCTTCCTCTACCACCCTATACTAGGCTCACCCAAATCATCATTCATAGCTTACTTGAGTGACTGGGATGGCAGGGGCTGGGCCTTTTTGGCTGGTATTATATGTGGATTCGGTAATGGTCTCCAATTCATGGGAGGCCAAGCTGCAGGATATGCAGCAGCTGATGCTGTTCAGGCACTTCCACTTGTGAGCACTTTTTGGGGTATACTTCTGTTTGGAGAGTACCGAAAATCATCACGAAGAACATATGCGTTGCTTGTCAGCATGTTGTTTATGTTTATTGTTGCCGTTGCTCTCCTCATGGCATCATCAGGGCGACGAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005274 GO:0005345 GO:0005350 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006206 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008152 GO:0008324 GO:0008655 GO:0009058 GO:0009112 GO:0009507 GO:0009536 GO:0009987 GO:0015075 GO:0015077 GO:0015078 GO:0015205 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015720 GO:0015851 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0018130 GO:0019438 GO:0019856 GO:0022804 GO:0022857 GO:0022890 GO:0034220 GO:0034641 GO:0034654 GO:0042221 GO:0042493 GO:0042886 GO:0042887 GO:0042906 GO:0042907 GO:0043094 GO:0043100 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046112 GO:0046483 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0072527 GO:0072528 GO:0072530 GO:0072531 GO:0098655 GO:0098660 GO:0098662 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ureide_permease

Protein Analysis

402

Amino Acids

43.48

Weight (kDa)

5.31

Isoelectric Point (pI)

33.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ureide_permease	PF07168	41 - 397	4.2e-192	Ureide permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT1G26440 AT2G03520 AT2G03530 AT2G03530 AT2G03530 AT2G03530 AT2G03530 AT2G03590 AT2G03590 AT2G03600 AT2G03600 AT2G03600 AT2G03600
fragaria_vesca	FvH4_4g30100 FvH4_4g30100 FvH4_4g30101 FvH4_4g30101 FvH4_4g30101 FvH4_4g30102
malus_domestica	MD16G1061500.v1.1
prunus_persica	Prupe.1G286600_v2.0.a1 Prupe.1G286600_v2.0.a1 Prupe.1G286600_v2.0.a1
pyrus_communis	pycom16g05370
rosa_chinensis	RchiOBHm_Chr4g0438401 RchiOBHm_Chr4g0438411 RchiOBHm_Chr4g0438431
rosa_laevigata	RLG00000006366 RLG00000006367
rosa_multiflora	Rmu_co8316253.1_g000001 Rmu_sc0002327.1_g000024 Rmu_sc0002327.1_g000025 Rmu_sc0019260.1_g000004 Rmu_sc0021561.1_g000001
rosa_roxburghii	Rroxscaffold_5G00379430 Rroxscaffold_5G00379440
rosa_rugosa	Rorug04G0309700 Rorug04G0309800
rosa_samantha	Rh4AG360500 Rh4BG371400 Rh4BG371500 Rh4CG385500 Rh4CG385600 Rh4DG366400 Rh4DG366500 Rh4DG366600
rosa_wichuraiana	Rw0G006510 Rw0G006520 Rw0G006530 Rw0G016460 Rw0G016470 Rw0G016480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	221
AccB1I	GGYRCC	1 cut(s)	26
AccB7I	CCANNNNNTGG	1 cut(s)	1012
AccI	GTMKAC	1 cut(s)	1087
AciI	CCGC	2 cut(s)	275, 464
AclWI	GGATC	1 cut(s)	533
AcoI	YGGCCR	1 cut(s)	768
AcsI	RAATTY	1 cut(s)	732
AfaI	GTAC	1 cut(s)	1106
AfeI	AGCGCT	1 cut(s)	424
AfiI	CCNNNNNNNGG	3 cut(s)	548, 905, 1012
AgsI	TTSAA	3 cut(s)	394, 564, 763
AhdI	GACNNNNNGTC	1 cut(s)	180
AjnI	CCWGG	2 cut(s)	439, 594
AjuI	GAANNNNNNNTTGG	2 cut(s)	908, 940
AluBI	AGCT	7 cut(s)	203, 503, 559, 658, 932, 1025, 1043
AluI	AGCT	7 cut(s)	203, 503, 559, 658, 932, 1025, 1043
Alw21I	GWGCWC	1 cut(s)	1076
Alw26I	GTCTC	2 cut(s)	593, 1007
AlwI	GGATC	1 cut(s)	533
AlwNI	CAGNNNCTG	2 cut(s)	960, 1043
Aor51HI	AGCGCT	1 cut(s)	424
AoxI	GGCC	7 cut(s)	48, 71, 103, 251, 768, 963, 1018
ApeKI	GCWGC	6 cut(s)	43, 155, 500, 1025, 1037, 1040
ApoI	RAATTY	1 cut(s)	732
Asp700I	GAANNNNTTC	2 cut(s)	398, 804
AspLEI	GCGC	1 cut(s)	425
AspS9I	GGNCC	3 cut(s)	252, 592, 963
AsuHPI	GGTGA	5 cut(s)	133, 355, 744, 874, 903
AvaII	GGWCC	1 cut(s)	592
BalI	TGGCCA	1 cut(s)	770
BanI	GGYRCC	1 cut(s)	26
BanII	GRGCYC	1 cut(s)	213
BbsI	GAAGAC	1 cut(s)	552
Bbv12I	GWGCWC	1 cut(s)	1076
BbvCI	CCTCAGC	2 cut(s)	114, 204
BbvI	GCAGC	6 cut(s)	30, 142, 512, 1012, 1049, 1052
BccI	CCATC	2 cut(s)	875, 944
BceAI	ACGGC	1 cut(s)	1154
BciT130I	CCWGG	2 cut(s)	441, 596
BclI	TGATCA	2 cut(s)	354, 778
BcoDI	GTCTC	2 cut(s)	593, 1007
BfaI	CTAG	1 cut(s)	905
BfmI	CTRYAG	2 cut(s)	639, 1026
BfoI	RGCGCY	1 cut(s)	426
BglI	GCCNNNNNGGC	1 cut(s)	971
BisI	GCNGC	6 cut(s)	44, 156, 501, 1026, 1038, 1041
BlsI	GCNGC	6 cut(s)	45, 157, 502, 1027, 1039, 1042
Bme1390I	CCNGG	2 cut(s)	441, 596
Bme18I	GGWCC	1 cut(s)	592
BmeRI	GACNNNNNGTC	1 cut(s)	180
BmgT120I	GGNCC	3 cut(s)	252, 592, 963
BmiI	GGNNCC	2 cut(s)	28, 210
BmrFI	CCNGG	2 cut(s)	441, 596
BmrI	ACTGGG	1 cut(s)	955
BmsI	GCATC	4 cut(s)	375, 857, 1036, 1196
BmuI	ACTGGG	1 cut(s)	955
BpiI	GAAGAC	1 cut(s)	552
BpmI	CTGGAG	1 cut(s)	617
Bpu10I	CCTNAGC	3 cut(s)	114, 204, 290
BpuEI	CTTGAG	2 cut(s)	680, 958
BsaI	GGTCTC	2 cut(s)	593, 1007
BsaJI	CCNNGG	1 cut(s)	295
BsaWI	WCCGGW	1 cut(s)	602
Bsc4I	CCNNNNNNNGG	3 cut(s)	548, 905, 1012
Bse1I	ACTGG	1 cut(s)	950
Bse3DI	GCAATG	2 cut(s)	276, 861
BseBI	CCWGG	2 cut(s)	441, 596
BseDI	CCNNGG	1 cut(s)	295
BseGI	GGATG	2 cut(s)	491, 955
BseLI	CCNNNNNNNGG	3 cut(s)	548, 905, 1012
BseMI	GCAATG	2 cut(s)	276, 861
BseMII	CTCAG	5 cut(s)	128, 195, 281, 609, 858
BseNI	ACTGG	1 cut(s)	950
BseRI	GAGGAG	2 cut(s)	221, 1169
BseXI	GCAGC	6 cut(s)	30, 142, 512, 1012, 1049, 1052
BseYI	CCCAGC	2 cut(s)	632, 960
BshFI	GGCC	7 cut(s)	50, 73, 105, 253, 770, 965, 1020
BshNI	GGYRCC	1 cut(s)	26
BsiHKAI	GWGCWC	1 cut(s)	1076
BsiSI	CCGG	2 cut(s)	242, 603
BslFI	GGGAC	2 cut(s)	79, 649
BslI	CCNNNNNNNGG	3 cut(s)	548, 905, 1012
BsmAI	GTCTC	2 cut(s)	593, 1007
BsmFI	GGGAC	2 cut(s)	79, 649
BsnI	GGCC	7 cut(s)	50, 73, 105, 253, 770, 965, 1020
Bso31I	GGTCTC	2 cut(s)	593, 1007
Bsp1286I	GDGCHC	2 cut(s)	213, 1076
Bsp143I	GATC	4 cut(s)	138, 354, 538, 778
BspACI	CCGC	2 cut(s)	275, 464
BspANI	GGCC	7 cut(s)	50, 73, 105, 253, 770, 965, 1020
BspCNI	CTCAG	5 cut(s)	127, 196, 282, 610, 857
BspLI	GGNNCC	2 cut(s)	28, 210
BspMAI	CTGCAG	2 cut(s)	643, 1030
BspPI	GGATC	1 cut(s)	533
BspQI	GCTCTTC	2 cut(s)	62, 686
BspT107I	GGYRCC	1 cut(s)	26
BspTNI	GGTCTC	2 cut(s)	593, 1007
BsrDI	GCAATG	2 cut(s)	276, 861
BsrI	ACTGG	1 cut(s)	950
BssECI	CCNNGG	1 cut(s)	295
BssMI	GATC	4 cut(s)	138, 354, 538, 778
BssNAI	GTATAC	1 cut(s)	1088
BssT1I	CCWWGG	1 cut(s)	295
Bst1107I	GTATAC	1 cut(s)	1088
Bst2UI	CCWGG	2 cut(s)	441, 596
Bst4CI	ACNGT	2 cut(s)	315, 373
Bst6I	CTCTTC	4 cut(s)	62, 94, 686, 752
BstAPI	GCANNNNNTGC	2 cut(s)	1034, 1046
BstC8I	GCNNGC	6 cut(s)	37, 41, 48, 75, 364, 451
BstDEI	CTNAG	6 cut(s)	114, 204, 290, 403, 618, 844
BstENI	CCTNNNNNAGG	1 cut(s)	903
BstF5I	GGATG	2 cut(s)	491, 955
BstH2I	RGCGCY	1 cut(s)	426
BstHHI	GCGC	1 cut(s)	425
BstKTI	GATC	4 cut(s)	141, 357, 541, 781
BstMAI	GTCTC	2 cut(s)	593, 1007
BstMBI	GATC	4 cut(s)	138, 354, 538, 778
BstMWI	GCNNNNNNNGC	7 cut(s)	52, 623, 638, 971, 1034, 1046, 1055
BstNI	CCWGG	2 cut(s)	441, 596
BstNSI	RCATGY	3 cut(s)	39, 43, 1150
BstSCI	CCNGG	2 cut(s)	439, 594
BstSFI	CTRYAG	2 cut(s)	639, 1026
BstV1I	GCAGC	6 cut(s)	30, 142, 512, 1012, 1049, 1052
BstV2I	GAAGAC	1 cut(s)	552
BstXI	CCANNNNNNTGG	1 cut(s)	151
BstZ17I	GTATAC	1 cut(s)	1088
BsuRI	GGCC	7 cut(s)	50, 73, 105, 253, 770, 965, 1020
BtsCI	GGATG	2 cut(s)	491, 955
BtsI	GCAGTG	1 cut(s)	357
BtsIMutI	CAGTG	2 cut(s)	357, 788
Cac8I	GCNNGC	6 cut(s)	37, 41, 48, 75, 364, 451
CaiI	CAGNNNCTG	2 cut(s)	960, 1043
CfoI	GCGC	1 cut(s)	425
Cfr13I	GGNCC	3 cut(s)	252, 592, 963
Csp6I	GTAC	1 cut(s)	1105
CviAII	CATG	7 cut(s)	36, 40, 69, 1012, 1147, 1183, 1206
CviQI	GTAC	1 cut(s)	1105
DdeI	CTNAG	6 cut(s)	114, 204, 290, 403, 618, 844
DpnI	GATC	4 cut(s)	140, 356, 540, 780
DpnII	GATC	4 cut(s)	138, 354, 538, 778
DriI	GACNNNNNGTC	1 cut(s)	180
EaeI	YGGCCR	1 cut(s)	768
Eam1104I	CTCTTC	4 cut(s)	62, 94, 686, 752
Eam1105I	GACNNNNNGTC	1 cut(s)	180
EarI	CTCTTC	4 cut(s)	62, 94, 686, 752
Eco130I	CCWWGG	1 cut(s)	295
Eco24I	GRGCYC	1 cut(s)	213
Eco31I	GGTCTC	2 cut(s)	593, 1007
Eco47I	GGWCC	1 cut(s)	592
Eco47III	AGCGCT	1 cut(s)	424
EcoNI	CCTNNNNNAGG	1 cut(s)	903
EcoO109I	RGGNCCY	1 cut(s)	592
EcoRII	CCWGG	2 cut(s)	439, 594
EcoT14I	CCWWGG	1 cut(s)	295
EcoT22I	ATGCAT	2 cut(s)	41, 322
EcoT38I	GRGCYC	1 cut(s)	213
ErhI	CCWWGG	1 cut(s)	295
FaeI	CATG	7 cut(s)	39, 43, 72, 1015, 1150, 1186, 1209
FalI	AAGNNNNNCTT	2 cut(s)	504, 536
FaqI	GGGAC	2 cut(s)	79, 649
FatI	CATG	7 cut(s)	35, 39, 68, 1011, 1146, 1182, 1205
FauI	CCCGC	1 cut(s)	268
FauNDI	CATATG	1 cut(s)	1129
FbaI	TGATCA	2 cut(s)	354, 778
FblI	GTMKAC	1 cut(s)	1087
Fnu4HI	GCNGC	6 cut(s)	44, 156, 501, 1026, 1038, 1041
FokI	GGATG	2 cut(s)	478, 962
FriOI	GRGCYC	1 cut(s)	213
Fsp4HI	GCNGC	6 cut(s)	44, 156, 501, 1026, 1038, 1041
FspBI	CTAG	1 cut(s)	905
GlaI	GCGC	1 cut(s)	424
GluI	GCNGC	6 cut(s)	44, 156, 501, 1026, 1038, 1041
GsaI	CCCAGC	2 cut(s)	636, 964
GsuI	CTGGAG	1 cut(s)	617
HaeII	RGCGCY	1 cut(s)	426
HaeIII	GGCC	7 cut(s)	50, 73, 105, 253, 770, 965, 1020
HapII	CCGG	2 cut(s)	242, 603
HhaI	GCGC	1 cut(s)	425
Hin1II	CATG	7 cut(s)	39, 43, 72, 1015, 1150, 1186, 1209
Hin6I	GCGC	1 cut(s)	423
HinP1I	GCGC	1 cut(s)	423
HindIII	AAGCTT	2 cut(s)	557, 656
HinfI	GANTC	3 cut(s)	301, 571, 990
HpaII	CCGG	2 cut(s)	242, 603
HphI	GGTGA	5 cut(s)	133, 355, 744, 874, 903
Hpy166II	GTNNAC	2 cut(s)	487, 1088
Hpy188I	TCNGA	1 cut(s)	186
Hpy188III	TCNNGA	7 cut(s)	82, 128, 289, 457, 542, 809, 1119
Hpy8I	GTNNAC	2 cut(s)	487, 1088
Hpy99I	CGWCG	1 cut(s)	1203
HpyAV	CCTTC	6 cut(s)	578, 583, 622, 765, 794, 895
HpyCH4III	ACNGT	2 cut(s)	315, 373
HpyCH4V	TGCA	9 cut(s)	39, 235, 269, 320, 362, 500, 641, 1028, 1037
HpyF10VI	GCNNNNNNNGC	7 cut(s)	52, 623, 638, 971, 1034, 1046, 1055
HpyF3I	CTNAG	6 cut(s)	114, 204, 290, 403, 618, 844
Hsp92II	CATG	7 cut(s)	39, 43, 72, 1015, 1150, 1186, 1209
HspAI	GCGC	1 cut(s)	423
Ksp22I	TGATCA	2 cut(s)	354, 778
Kzo9I	GATC	4 cut(s)	138, 354, 538, 778
LguI	GCTCTTC	2 cut(s)	62, 686
LmnI	GCTCC	1 cut(s)	208
Lsp1109I	GCAGC	6 cut(s)	30, 142, 512, 1012, 1049, 1052
LweI	GCATC	4 cut(s)	375, 857, 1036, 1196
MaeI	CTAG	1 cut(s)	905
MaeIII	GTNAC	2 cut(s)	343, 941
MalI	GATC	4 cut(s)	140, 356, 540, 780
MboI	GATC	4 cut(s)	138, 354, 538, 778
MboII	GAAGA	7 cut(s)	49, 111, 300, 557, 703, 739, 1134
MhlI	GDGCHC	2 cut(s)	213, 1076
MlsI	TGGCCA	1 cut(s)	770
MluCI	AATT	8 cut(s)	145, 214, 247, 394, 526, 675, 732, 1007
MluNI	TGGCCA	1 cut(s)	770
MnlI	CCTC	7 cut(s)	17, 95, 123, 199, 899, 1010, 1190
Mox20I	TGGCCA	1 cut(s)	770
Mph1103I	ATGCAT	2 cut(s)	41, 322
MroXI	GAANNNNTTC	2 cut(s)	398, 804
MscI	TGGCCA	1 cut(s)	770
MseI	TTAA	1 cut(s)	678
Msp20I	TGGCCA	1 cut(s)	770
MspA1I	CMGCKG	3 cut(s)	203, 503, 1043
MspI	CCGG	2 cut(s)	242, 603
MspR9I	CCNGG	2 cut(s)	441, 596
MvaI	CCWGG	2 cut(s)	441, 596
MwoI	GCNNNNNNNGC	7 cut(s)	52, 623, 638, 971, 1034, 1046, 1055
NdeI	CATATG	1 cut(s)	1129
NdeII	GATC	4 cut(s)	138, 354, 538, 778
NlaIII	CATG	7 cut(s)	39, 43, 72, 1015, 1150, 1186, 1209
NlaIV	GGNNCC	2 cut(s)	28, 210
NmuCI	GTSAC	2 cut(s)	343, 941
NsiI	ATGCAT	2 cut(s)	41, 322
NspI	RCATGY	3 cut(s)	39, 43, 1150
PaeI	GCATGC	2 cut(s)	39, 43
PciSI	GCTCTTC	2 cut(s)	62, 686
PdmI	GAANNNNTTC	2 cut(s)	398, 804
PfeI	GAWTC	3 cut(s)	301, 571, 990
PflMI	CCANNNNNTGG	1 cut(s)	1012
PkrI	GCNGC	6 cut(s)	45, 157, 502, 1027, 1039, 1042
PpuMI	RGGWCCY	1 cut(s)	592
PsiI	TTATAA	1 cut(s)	221
Psp5II	RGGWCCY	1 cut(s)	592
Psp6I	CCWGG	2 cut(s)	439, 594
PspFI	CCCAGC	2 cut(s)	632, 960
PspGI	CCWGG	2 cut(s)	439, 594
PspN4I	GGNNCC	2 cut(s)	28, 210
PspPI	GGNCC	3 cut(s)	252, 592, 963
PspPPI	RGGWCCY	1 cut(s)	592
PstI	CTGCAG	2 cut(s)	643, 1030
PstNI	CAGNNNCTG	2 cut(s)	960, 1043
PvuII	CAGCTG	3 cut(s)	203, 503, 1043
RsaI	GTAC	1 cut(s)	1106
RsaNI	GTAC	1 cut(s)	1105
SapI	GCTCTTC	2 cut(s)	62, 686
SaqAI	TTAA	1 cut(s)	678
SatI	GCNGC	6 cut(s)	44, 156, 501, 1026, 1038, 1041
Sau3AI	GATC	4 cut(s)	138, 354, 538, 778
Sau96I	GGNCC	3 cut(s)	252, 592, 963
ScrFI	CCNGG	2 cut(s)	441, 596
SduI	GDGCHC	2 cut(s)	213, 1076
SfaNI	GCATC	4 cut(s)	375, 857, 1036, 1196
SfcI	CTRYAG	2 cut(s)	639, 1026
SinI	GGWCC	1 cut(s)	592
SmlI	CTYRAG	2 cut(s)	659, 937
SmoI	CTYRAG	2 cut(s)	659, 937
SphI	GCATGC	2 cut(s)	39, 43
Sse9I	AATT	8 cut(s)	145, 214, 247, 394, 526, 675, 732, 1007
SsiI	CCGC	2 cut(s)	275, 464
SspMI	CTAG	1 cut(s)	905
StyD4I	CCNGG	2 cut(s)	439, 594
StyI	CCWWGG	1 cut(s)	295
TaaI	ACNGT	2 cut(s)	315, 373
TaqI	TCGA	2 cut(s)	93, 137
TasI	AATT	8 cut(s)	145, 214, 247, 394, 526, 675, 732, 1007
TfiI	GAWTC	3 cut(s)	301, 571, 990
Tru1I	TTAA	1 cut(s)	678
Tru9I	TTAA	1 cut(s)	678
TscAI	CASTG	2 cut(s)	364, 788
TseFI	GTSAC	2 cut(s)	343, 941
TseI	GCWGC	6 cut(s)	43, 155, 500, 1025, 1037, 1040
Tsp45I	GTSAC	2 cut(s)	343, 941
TspDTI	ATGAA	3 cut(s)	747, 916, 1000
TspGWI	ACGGA	1 cut(s)	564
TspRI	CASTG	2 cut(s)	364, 788
Van91I	CCANNNNNTGG	1 cut(s)	1012
VpaK11BI	GGWCC	1 cut(s)	592
XagI	CCTNNNNNAGG	1 cut(s)	903
XapI	RAATTY	1 cut(s)	732
XceI	RCATGY	3 cut(s)	39, 43, 1150
XmiI	GTMKAC	1 cut(s)	1087
XmnI	GAANNNNTTC	2 cut(s)	398, 804
XspI	CTAG	1 cut(s)	905
Zsp2I	ATGCAT	2 cut(s)	41, 322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.