AT2G03667

Asparagine synthetase domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
1114127 .. 1117477
3351 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G03667.1

Sequence Viewer

Length: 1833 bp
ATGTGCGGAATTGCAATTGTAGTGTGCGGCGTTCGTATCGAACTCTCGACACTTTCGTCGTCTCTCTCTGAAACTGAGACTCCTTTCGAACGATTACAAGTCTCTGTTGAAGATGTTAAAGCTGTCTTAAGCCAAAGAGGTCCTGATAGTGTAGGAGAAAAGACTATTCATCTTCGACCAAATTGTGGTCAAGAATCTGCTACTCTCTCTGTTGTTGAGACTAGTGAAGGAACTTATAAGCTTGAGGAGACTACTTCTTTGGGTGAATTGCATTTTATTGGTTCTACATTACAGCTTAGAGGAACTAGTCCTATAAGGCAACCATTGGTGGATTCTTCTGGGAACATTCTAGCTTACAATGGCGAAGTATTTGGTGGAATTGAACTCAACAGCTATGATAATGATACTGAAGTGCTTTTGAAGTCTTTAGAGAAAGCAAAATCTTTAGTTCCAGATGTTCTTTCGATGATTAAAGGTCCCTGGGCCATTATATATTGGCAGGAAAGCTCGAGAACGTTATGGTTTGGTAAAGATCCGTTTGGTCGGAGGAGCCTTCTTGTTCACTCGCCAACTGTGGAAGACCCTCGTTTTCTTCTATCGTCTGTTTCACCAGCTTCTTCAGTTTCTCAAGGATTGGATACTGAAAATGGTAATAGCCTTCATAGATATTGGGAAGAGCTTCCATGTGGCGTGTACAGTATTTCTTTTGGGGTTTCAGAATTATGTATTCATGGTGAAGTTACAAAACACGAATGGAGAAATACCATCTGGAAAGAATTGATTGAATGGGAAAGGAAATTAGTTGTACCTAGACCTGAAGATCTATCAACGTCATCGCTTAGTGGAGTTCAGGAAGACAAATCTGTGTCAACTTCTCTAGGATTTGCGCAGACAGTTTTGGTCGTGTTAAAGGAATCAGTGAGGCGGCGAACTTCACTTCATAGCATTTATCAGGGAGATAAAGAAGCTGTCCCAGTAGCTGTTCTTTTCTCTGGTGGATTGGATTCGATGATTCTTGCTGCGCTGTTGCATCAGTGCCTTGATCCAAAATATGAAGTTGATCTCCTTAATGTCAGTTTTGATGGTCCTAATGCTCCTGATAGGATCTCCGCCAAGGCTGGAATAAAGGAACTCAAAAAGATTGCACCTTTTAGAAGGTGGAAACTTGTTGAGATTGATGCTGATCTGTCAAAACTAGGCTTTGAGACAAAACGTGTTATGTCACTCATAAATCCTGCAGACACTTACATGGACCTTAACATAGGAACAGCATTATGGTTAGCTGCTCGTGGTGATGGTTGGATTCACGAAGATAATGGAAATCCAAGTGTAGAGGAAAATAACCAGCGGGTCAAGTATAAGTCCGATGCTAGAATCCTGCTTGTTGGCGCTGGTGCTGATGAGCAATGTGCCGGTTACGGTAGGCACAGAACTAAATATCGAAATGGAAGTTGGGTTGCGTTGGATCAAGAAATGAAATTAGATATGCAGAGAATTTGGAAAAGAAATTTGGGTCGAGATGATCGATGCATTGCAGATAACGGTAAAGAGGGGCGATTCCCGTTCTTAGATGAAGATGTGATAAAGACTCTCCTTGACATTCCCTTGTGGGAAATCGCTGATCTTGAGCAACCAAGTGGAACGGGAGACAAGAAGATTCTTAGACAGGTTGCAAGCCTGCTTGGTGTACATGAAGTTGCAAAGATGCCTAAGAGAGCAATTCAGTTTGGATCAAGAATCGCTCGTGAATCAAACCGGAAGAATTTTGGAAGTAACCGTGCCGCAAACCAGGCTTCTGCCGGGAGCGTGAGATTCCTAGCACCGTCACACTAA

Protein Analysis

610

Amino Acids

67.65

Weight (kDa)

5.95

Isoelectric Point (pI)

40.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GATase_7 PF13537 106 - 201 3.2e-08 Glutamine amidotransferase domain
Asn_synthase PF00733 483 - 576 3.2e-08 Asparagine synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 237
AasI GACNNNNNNGTC 1 cut(s) 55
Acc16I TGCGCA 1 cut(s) 888
AccB7I CCANNNNNTGG 1 cut(s) 185
AciI CCGC 6 cut(s) 6, 27, 925, 1110, 1348, 1782
AclI AACGTT 1 cut(s) 515
AclWI GGATC 5 cut(s) 527, 1037, 1112, 1473, 1738
AcsI RAATTY 3 cut(s) 1494, 1507, 1762
AcuI CTGAAG 3 cut(s) 429, 603, 837
AfaI GTAC 3 cut(s) 695, 807, 1689
AfiI CCNNNNNNNGG 1 cut(s) 185
AflII CTTAAG 1 cut(s) 127
AflIII ACRYGT 1 cut(s) 1213
AgsI TTSAA 4 cut(s) 110, 383, 421, 785
AhlI ACTAGT 2 cut(s) 221, 305
AjnI CCWGG 2 cut(s) 479, 1788
AjuI GAANNNNNNNTTGG 4 cut(s) 1435, 1467, 1493, 1525
Alw26I GTCTC 7 cut(s) 66, 71, 106, 212, 242, 1199, 1641
AlwI GGATC 5 cut(s) 527, 1037, 1112, 1473, 1738
AlwNI CAGNNNCTG 1 cut(s) 980
Ama87I CYCGRG 1 cut(s) 508
AoxI GGCC 1 cut(s) 483
ApeKI GCWGC 2 cut(s) 1019, 1283
ApoI RAATTY 3 cut(s) 1494, 1507, 1762
ArsI GACNNNNNNTTYG 2 cut(s) 241, 273
Asp700I GAANNNNTTC 1 cut(s) 678
AspLEI GCGC 3 cut(s) 889, 1024, 1391
AspS9I GGNCC 5 cut(s) 140, 476, 483, 1085, 1252
AsuC2I CCSGG 1 cut(s) 1801
AsuHPI GGTGA 4 cut(s) 275, 600, 746, 1304
AsuII TTCGAA 1 cut(s) 87
AvaI CYCGRG 1 cut(s) 508
AvaII GGWCC 4 cut(s) 140, 476, 1085, 1252
BaeI ACNNNNGTAYC 2 cut(s) 396, 429
BauI CACGAG 2 cut(s) 1287, 1743
BbsI GAAGAC 2 cut(s) 585, 861
BbvI GCAGC 2 cut(s) 1006, 1270
BccI CCATC 3 cut(s) 773, 1076, 1289
BciT130I CCWGG 2 cut(s) 481, 1790
BciVI GTATCC 1 cut(s) 631
BcnI CCSGG 1 cut(s) 1801
BcoDI GTCTC 7 cut(s) 66, 71, 106, 212, 242, 1199, 1641
BcuI ACTAGT 2 cut(s) 221, 305
BfaI CTAG 8 cut(s) 222, 306, 350, 810, 878, 1196, 1371, 1817
BfmI CTRYAG 1 cut(s) 1236
BfoI RGCGCY 1 cut(s) 1392
BfrI CTTAAG 1 cut(s) 127
BfuI GTATCC 1 cut(s) 631
BglII AGATCT 1 cut(s) 820
BisI GCNGC 5 cut(s) 28, 926, 1020, 1284, 1782
BlsI GCNGC 5 cut(s) 29, 927, 1021, 1285, 1783
Bme1390I CCNGG 3 cut(s) 481, 1790, 1801
Bme18I GGWCC 4 cut(s) 140, 476, 1085, 1252
BmeT110I CYCGRG 1 cut(s) 508
BmgT120I GGNCC 5 cut(s) 140, 476, 483, 1085, 1252
BmiI GGNNCC 2 cut(s) 478, 551
BmrFI CCNGG 3 cut(s) 481, 1790, 1801
BmrI ACTGGG 1 cut(s) 968
BmsI GCATC 5 cut(s) 1039, 1168, 1357, 1517, 1695
BmuI ACTGGG 1 cut(s) 968
BpiI GAAGAC 2 cut(s) 585, 861
Bpu14I TTCGAA 1 cut(s) 87
BpuEI CTTGAG 3 cut(s) 263, 612, 1646
BpuMI CCSGG 1 cut(s) 1801
Bsa29I ATCGAT 1 cut(s) 1525
BsaBI GATNNNNATC 1 cut(s) 1182
BsaJI CCNNGG 3 cut(s) 479, 480, 1113
BsaWI WCCGGW 1 cut(s) 1755
BsaXI ACNNNNNCTCC 2 cut(s) 64, 94
Bsc4I CCNNNNNNNGG 1 cut(s) 185
Bse118I RCCGGY 1 cut(s) 1412
Bse1I ACTGG 1 cut(s) 974
Bse3DI GCAATG 2 cut(s) 1412, 1530
Bse8I GATNNNNATC 1 cut(s) 1182
BseBI CCWGG 2 cut(s) 481, 1790
BseCI ATCGAT 1 cut(s) 1525
BseDI CCNNGG 3 cut(s) 479, 480, 1113
BseJI GATNNNNATC 1 cut(s) 1182
BseLI CCNNNNNNNGG 1 cut(s) 185
BseMI GCAATG 2 cut(s) 1412, 1530
BseMII CTCAG 1 cut(s) 66
BseNI ACTGG 1 cut(s) 974
BseRI GAGGAG 2 cut(s) 260, 562
BseXI GCAGC 2 cut(s) 1006, 1270
BshFI GGCC 1 cut(s) 485
BshVI ATCGAT 1 cut(s) 1525
BsiHKCI CYCGRG 1 cut(s) 508
BsiSI CCGG 3 cut(s) 1413, 1756, 1800
BslFI GGGAC 2 cut(s) 462, 956
BslI CCNNNNNNNGG 1 cut(s) 185
BsmAI GTCTC 7 cut(s) 66, 71, 106, 212, 242, 1199, 1641
BsmBI CGTCTC 1 cut(s) 66
BsmFI GGGAC 2 cut(s) 462, 956
BsnI GGCC 1 cut(s) 485
BsoBI CYCGRG 1 cut(s) 508
Bsp119I TTCGAA 1 cut(s) 87
Bsp1407I TGTACA 2 cut(s) 693, 1687
BspACI CCGC 6 cut(s) 6, 27, 925, 1110, 1348, 1782
BspANI GGCC 1 cut(s) 485
BspCNI CTCAG 1 cut(s) 67
BspDI ATCGAT 1 cut(s) 1525
BspLI GGNNCC 2 cut(s) 478, 551
BspMAI CTGCAG 1 cut(s) 1240
BspPI GGATC 5 cut(s) 527, 1037, 1112, 1473, 1738
BspQI GCTCTTC 1 cut(s) 669
BspT104I TTCGAA 1 cut(s) 87
BspTI CTTAAG 1 cut(s) 127
BsrDI GCAATG 2 cut(s) 1412, 1530
BsrFI RCCGGY 1 cut(s) 1412
BsrGI TGTACA 2 cut(s) 693, 1687
BsrI ACTGG 1 cut(s) 974
BssAI RCCGGY 1 cut(s) 1412
BssECI CCNNGG 3 cut(s) 479, 480, 1113
BssSI CACGAG 2 cut(s) 1287, 1743
BssT1I CCWWGG 1 cut(s) 1113
Bst2BI CACGAG 2 cut(s) 1287, 1743
Bst2UI CCWGG 2 cut(s) 481, 1790
Bst4CI ACNGT 7 cut(s) 574, 698, 895, 1421, 1544, 1778, 1824
Bst6I CTCTTC 1 cut(s) 669
BstAFI CTTAAG 1 cut(s) 127
BstAUI TGTACA 2 cut(s) 693, 1687
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 2 cut(s) 1675, 1679
BstDEI CTNAG 6 cut(s) 75, 296, 839, 1567, 1661, 1710
BstH2I RGCGCY 1 cut(s) 1392
BstHHI GCGC 3 cut(s) 889, 1024, 1391
BstMAI GTCTC 7 cut(s) 66, 71, 106, 212, 242, 1199, 1641
BstMWI GCNNNNNNNGC 1 cut(s) 1790
BstNI CCWGG 2 cut(s) 481, 1790
BstSCI CCNGG 3 cut(s) 479, 1788, 1799
BstSFI CTRYAG 1 cut(s) 1236
BstV1I GCAGC 2 cut(s) 1006, 1270
BstV2I GAAGAC 2 cut(s) 585, 861
BstX2I RGATCY 3 cut(s) 532, 820, 1104
BstYI RGATCY 3 cut(s) 532, 820, 1104
Bsu15I ATCGAT 1 cut(s) 1525
BsuI GTATCC 1 cut(s) 631
BsuRI GGCC 1 cut(s) 485
BsuTUI ATCGAT 1 cut(s) 1525
BtgZI GCGATG 1 cut(s) 819
BtsIMutI CAGTG 2 cut(s) 924, 1040
Cac8I GCNNGC 2 cut(s) 1675, 1679
CaiI CAGNNNCTG 1 cut(s) 980
CfoI GCGC 3 cut(s) 889, 1024, 1391
Cfr10I RCCGGY 1 cut(s) 1412
Cfr13I GGNCC 5 cut(s) 140, 476, 483, 1085, 1252
ClaI ATCGAT 1 cut(s) 1525
Csp6I GTAC 3 cut(s) 694, 806, 1688
CviAII CATG 4 cut(s) 684, 731, 1249, 1691
CviQI GTAC 3 cut(s) 694, 806, 1688
DdeI CTNAG 6 cut(s) 75, 296, 839, 1567, 1661, 1710
DrdI GACNNNNNNGTC 1 cut(s) 55
DseDI GACNNNNNNGTC 1 cut(s) 55
Eam1104I CTCTTC 1 cut(s) 669
EarI CTCTTC 1 cut(s) 669
EciI GGCGGA 1 cut(s) 1099
Eco130I CCWWGG 1 cut(s) 1113
Eco47I GGWCC 4 cut(s) 140, 476, 1085, 1252
Eco57I CTGAAG 3 cut(s) 429, 603, 837
Eco88I CYCGRG 1 cut(s) 508
EcoO109I RGGNCCY 2 cut(s) 140, 476
EcoRII CCWGG 2 cut(s) 479, 1788
EcoT14I CCWWGG 1 cut(s) 1113
EcoT22I ATGCAT 1 cut(s) 1532
ErhI CCWWGG 1 cut(s) 1113
Esp3I CGTCTC 1 cut(s) 66
FaeI CATG 4 cut(s) 687, 734, 1252, 1694
FaqI GGGAC 2 cut(s) 462, 956
FatI CATG 4 cut(s) 683, 730, 1248, 1690
FauI CCCGC 1 cut(s) 1341
Fnu4HI GCNGC 5 cut(s) 28, 926, 1020, 1284, 1782
Fsp4HI GCNGC 5 cut(s) 28, 926, 1020, 1284, 1782
FspBI CTAG 8 cut(s) 222, 306, 350, 810, 878, 1196, 1371, 1817
FspI TGCGCA 1 cut(s) 888
GlaI GCGC 3 cut(s) 888, 1023, 1390
GluI GCNGC 5 cut(s) 28, 926, 1020, 1284, 1782
HaeII RGCGCY 1 cut(s) 1392
HaeIII GGCC 1 cut(s) 485
HapII CCGG 3 cut(s) 1413, 1756, 1800
HhaI GCGC 3 cut(s) 889, 1024, 1391
Hin1II CATG 4 cut(s) 687, 734, 1252, 1694
Hin6I GCGC 3 cut(s) 887, 1022, 1389
HinP1I GCGC 3 cut(s) 887, 1022, 1389
HincII GTYRAC 1 cut(s) 870
HindII GTYRAC 1 cut(s) 870
HindIII AAGCTT 1 cut(s) 239
HpaII CCGG 3 cut(s) 1413, 1756, 1800
HphI GGTGA 4 cut(s) 275, 600, 746, 1304
Hpy166II GTNNAC 4 cut(s) 562, 694, 870, 1688
Hpy188I TCNGA 4 cut(s) 70, 546, 718, 1366
Hpy8I GTNNAC 4 cut(s) 562, 694, 870, 1688
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 4 cut(s) 221, 563, 668, 1149
HpyCH4III ACNGT 7 cut(s) 574, 698, 895, 1421, 1544, 1778, 1824
HpyCH4IV ACGT 3 cut(s) 515, 830, 1213
HpyF10VI GCNNNNNNNGC 1 cut(s) 1790
HpyF3I CTNAG 6 cut(s) 75, 296, 839, 1567, 1661, 1710
HpySE526I ACGT 3 cut(s) 515, 830, 1213
Hsp92II CATG 4 cut(s) 687, 734, 1252, 1694
HspAI GCGC 3 cut(s) 887, 1022, 1389
LguI GCTCTTC 1 cut(s) 669
LmnI GCTCC 3 cut(s) 549, 1099, 1803
Lsp1109I GCAGC 2 cut(s) 1006, 1270
LweI GCATC 5 cut(s) 1039, 1168, 1357, 1517, 1695
MaeI CTAG 8 cut(s) 222, 306, 350, 810, 878, 1196, 1371, 1817
MaeII ACGT 3 cut(s) 515, 830, 1213
MaeIII GTNAC 5 cut(s) 739, 1221, 1415, 1772, 1824
MfeI CAATTG 1 cut(s) 15
MflI RGATCY 3 cut(s) 532, 820, 1104
MlyI GAGTC 2 cut(s) 73, 1582
MmeI TCCRAC 3 cut(s) 524, 1280, 1443
MnlI CCTC 8 cut(s) 131, 238, 293, 540, 594, 915, 1327, 1543
Mph1103I ATGCAT 1 cut(s) 1532
MroXI GAANNNNTTC 1 cut(s) 678
MseI TTAA 6 cut(s) 117, 128, 471, 908, 1068, 1257
MslI CAYNNNNRTG 1 cut(s) 1247
MspA1I CMGCKG 1 cut(s) 1348
MspCI CTTAAG 1 cut(s) 127
MspI CCGG 3 cut(s) 1413, 1756, 1800
MspR9I CCNGG 3 cut(s) 481, 1790, 1801
MunI CAATTG 1 cut(s) 15
MvaI CCWGG 2 cut(s) 481, 1790
MwoI GCNNNNNNNGC 1 cut(s) 1790
NciI CCSGG 1 cut(s) 1801
NlaIII CATG 4 cut(s) 687, 734, 1252, 1694
NlaIV GGNNCC 2 cut(s) 478, 551
NmuCI GTSAC 2 cut(s) 1221, 1824
NsbI TGCGCA 1 cut(s) 888
NsiI ATGCAT 1 cut(s) 1532
NspV TTCGAA 1 cut(s) 87
PaeR7I CTCGAG 1 cut(s) 508
PasI CCCWGGG 1 cut(s) 480
PciSI GCTCTTC 1 cut(s) 669
PcsI WCGNNNNNNNCGW 2 cut(s) 53, 1522
PdmI GAANNNNTTC 1 cut(s) 678
PflMI CCANNNNNTGG 1 cut(s) 185
PkrI GCNGC 5 cut(s) 29, 927, 1021, 1285, 1783
PleI GAGTC 2 cut(s) 73, 1582
PpsI GAGTC 2 cut(s) 73, 1582
PpuMI RGGWCCY 2 cut(s) 140, 476
PsiI TTATAA 1 cut(s) 237
Psp1406I AACGTT 1 cut(s) 515
Psp5II RGGWCCY 2 cut(s) 140, 476
Psp6I CCWGG 2 cut(s) 479, 1788
PspGI CCWGG 2 cut(s) 479, 1788
PspN4I GGNNCC 2 cut(s) 478, 551
PspPI GGNCC 5 cut(s) 140, 476, 483, 1085, 1252
PspPPI RGGWCCY 2 cut(s) 140, 476
PstI CTGCAG 1 cut(s) 1240
PstNI CAGNNNCTG 1 cut(s) 980
PsuI RGATCY 3 cut(s) 532, 820, 1104
RsaI GTAC 3 cut(s) 695, 807, 1689
RsaNI GTAC 3 cut(s) 694, 806, 1688
RseI CAYNNNNRTG 1 cut(s) 1247
SapI GCTCTTC 1 cut(s) 669
SaqAI TTAA 6 cut(s) 117, 128, 471, 908, 1068, 1257
SatI GCNGC 5 cut(s) 28, 926, 1020, 1284, 1782
Sau96I GGNCC 5 cut(s) 140, 476, 483, 1085, 1252
SchI GAGTC 2 cut(s) 73, 1582
ScrFI CCNGG 3 cut(s) 481, 1790, 1801
SfaNI GCATC 5 cut(s) 1039, 1168, 1357, 1517, 1695
SfcI CTRYAG 1 cut(s) 1236
Sfr274I CTCGAG 1 cut(s) 508
SfuI TTCGAA 1 cut(s) 87
SinI GGWCC 4 cut(s) 140, 476, 1085, 1252
SlaI CTCGAG 1 cut(s) 508
SmiMI CAYNNNNRTG 1 cut(s) 1247
SmlI CTYRAG 5 cut(s) 127, 242, 508, 627, 1625
SmoI CTYRAG 5 cut(s) 127, 242, 508, 627, 1625
SpeI ACTAGT 2 cut(s) 221, 305
SsiI CCGC 6 cut(s) 6, 27, 925, 1110, 1348, 1782
SspMI CTAG 8 cut(s) 222, 306, 350, 810, 878, 1196, 1371, 1817
StyD4I CCNGG 3 cut(s) 479, 1788, 1799
StyI CCWWGG 1 cut(s) 1113
TaaI ACNGT 7 cut(s) 574, 698, 895, 1421, 1544, 1778, 1824
TaiI ACGT 3 cut(s) 518, 833, 1216
TatI WGTACW 2 cut(s) 693, 1687
TauI GCSGC 3 cut(s) 30, 928, 1784
Tru1I TTAA 6 cut(s) 117, 128, 471, 908, 1068, 1257
Tru9I TTAA 6 cut(s) 117, 128, 471, 908, 1068, 1257
TscAI CASTG 2 cut(s) 924, 1040
TseFI GTSAC 2 cut(s) 1221, 1824
TseI GCWGC 2 cut(s) 1019, 1283
Tsp45I GTSAC 2 cut(s) 1221, 1824
TspDTI ATGAA 8 cut(s) 158, 650, 719, 929, 1068, 1490, 1587, 1707
TspGWI ACGGA 1 cut(s) 525
TspRI CASTG 2 cut(s) 924, 1040
Van91I CCANNNNNTGG 1 cut(s) 185
Vha464I CTTAAG 1 cut(s) 127
VpaK11BI GGWCC 4 cut(s) 140, 476, 1085, 1252
XapI RAATTY 3 cut(s) 1494, 1507, 1762
XhoI CTCGAG 1 cut(s) 508
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 8 cut(s) 222, 306, 350, 810, 878, 1196, 1371, 1817
Zsp2I ATGCAT 1 cut(s) 1532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.