Rmu_sc0004728.1_g000004

Asparagine synthetase domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004728.1
Physical Location & Seq
Forward (+)
13360 .. 17364
4005 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004728.1_g000004.1.cds

Sequence Viewer

Length: 1899 bp
atgtgcggaatcgctctgatcatctccggcattcgcttcgacttatcgtctctgcttctcgacaccacacctccagtcaccaactccgaccaactagagttcacaatagccgaccttgcagccgctctgcgacggaggggcccagatagcttaggcaccaagaagcttcttcttcactcatcaggctccgaaatcgtgtctggagtagaggaggagttcaacaactgcttctctgcggcaaatggtcgaacaccctgtatgcacttttttggtgctactttgcagctcaggggagtcaacccagtacttcacccattgatagattcgtctaagaacgttcttgtctataatggtgagatctttggggggattgagattgctagtgaggagaatgacggtgaagttctaatggggttgctgggagggtgtgaaggttgtgtgccgaatgttgtttctaggatcaagggcccttgggctatcatctattggcaggaaagttcaagaacattatggtttgggagagatgcatttggtcgccgcagtcttcttgttcattggccgacagtggaggactctcggtttctgttatcatcagtatcacccgttgcctcaaatgagcattcttctgctgaaaatggaacaaccaagcttggtttttgggaggagctgccatgtggaatatacagtgtatccatagatgctcccaatggtgacgggagtttggttggtgaagtgaaaaagcatgaatggactaatgctgtgctagaagaactgataaaatgggagagaacatctgtcgaacccaaacccaaagagttgcatatttcacgttgtgagactgtaagagggcaacacgatatgaactcacttacttcagatatagtgccaatgccatctcagtcaggcaatatacaagcttcaatttcagtgccagcagaggctgtgctgattgctttaagggaatcagttttgcggcgatcttcactgcacataatttttcaggcaagtgtgcatgatgtggaaaagaatcttgtaccggtggcagttcttttttctggtggattggattctatgataattgcagcattgttgcatgagtgcctagatccaagctatgagattgatctacttaatgtgagctttgatggtcagtctgctccagatagaatctctgccaaggcaggagtgagcgaactgagaagaattgcacccttaagaaagtggaaacttgtggaggtcgatgctgatttatcaaatttgacctttgaaacaaagcgtgtattgtctctcataaaccctgccaacacctacatggacctaaatataggaatcgcgttatggctggcagctggtggggatggatgggtttatgaggaaaatagcaaatataatgatgagaattgtcaaggtgttaaatacaggtcaaaggctaggattgtccttgttggttcaggtgcagatgagcaatgtgctggctatggtaggcacagaacaaaatatagaagtggaagttggctgcgactgcatgaggaaatgaaactggatatgcaaagaatatggaaaagaaaccttggtagagatgatagatgcattgctgacactggcaaggaggcaaggtttccttttttggatgaagatgttatacgaactttattggggattcctctctgggaggttaccaaccttgatcaaccaagtggaataggagataagaagatattgagagaggttgcaaaattgcttggtttacatgaagctgctactctgcctaaacgagctatacagtttggtacaagaattgcaagggcgtccaatagaaagaatttcggaagtaaccgtgctgcaaatcaggcatctgcaggaagtgtggtgattcacaagcagttggacacggcttag

Protein Analysis

632

Amino Acids

69.52

Weight (kDa)

5.98

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 155
AccBSI CCGCTC 1 cut(s) 125
AccII CGCG 1 cut(s) 1334
AciI CCGC 5 cut(s) 6, 123, 236, 538, 973
AclI AACGTT 1 cut(s) 336
AclWI GGATC 2 cut(s) 467, 1100
AcoI YGGCCR 1 cut(s) 557
AcsI RAATTY 2 cut(s) 1255, 1822
AcuI CTGAAG 1 cut(s) 858
AcyI GRCGYC 1 cut(s) 1808
AdeI CACNNNGTG 1 cut(s) 833
AfaI GTAC 3 cut(s) 306, 1035, 1792
AflII CTTAAG 1 cut(s) 1213
AgeI ACCGGT 1 cut(s) 1036
AgsI TTSAA 4 cut(s) 220, 501, 921, 1268
AhdI GACNNNNNGTC 1 cut(s) 46
AjuI GAANNNNNNNTTGG 2 cut(s) 1495, 1527
Alw26I GTCTC 3 cut(s) 54, 830, 1290
AlwI GGATC 2 cut(s) 467, 1100
AlwNI CAGNNNCTG 1 cut(s) 941
AoxI GGCC 3 cut(s) 139, 466, 557
ApaI GGGCCC 2 cut(s) 143, 470
ApeKI GCWGC 8 cut(s) 119, 283, 667, 1082, 1346, 1516, 1757, 1841
ApoI RAATTY 2 cut(s) 1255, 1822
AsiGI ACCGGT 1 cut(s) 1036
AspS9I GGNCC 5 cut(s) 139, 140, 466, 467, 1315
AsuHPI GGTGA 8 cut(s) 70, 302, 365, 410, 591, 722, 740, 1882
AvaII GGWCC 1 cut(s) 1315
BaeGI GKGCMC 2 cut(s) 143, 470
BanI GGYRCC 1 cut(s) 155
BanII GRGCYC 2 cut(s) 143, 470
BarI GAAGNNNNNNTAC 2 cut(s) 1626, 1658
BbsI GAAGAC 1 cut(s) 536
BbvI GCAGC 8 cut(s) 131, 295, 654, 1094, 1358, 1503, 1744, 1828
BccI CCATC 4 cut(s) 901, 1139, 1352, 1356
BcgI CGANNNNNNTGC 2 cut(s) 19, 53
BciVI GTATCC 1 cut(s) 700
BclI TGATCA 2 cut(s) 18, 1687
BcoDI GTCTC 3 cut(s) 54, 830, 1290
BfaI CTAG 6 cut(s) 95, 381, 456, 764, 1103, 1431
BfmI CTRYAG 1 cut(s) 1857
BfrI CTTAAG 1 cut(s) 1213
BfuI GTATCC 1 cut(s) 700
BglII AGATCT 1 cut(s) 357
BmcAI AGTACT 1 cut(s) 306
Bme18I GGWCC 1 cut(s) 1315
BmeRI GACNNNNNGTC 1 cut(s) 46
BmgT120I GGNCC 5 cut(s) 139, 140, 466, 467, 1315
BmiI GGNNCC 5 cut(s) 140, 141, 157, 187, 468
BmrI ACTGGG 1 cut(s) 296
BmsI GCATC 5 cut(s) 514, 688, 1231, 1577, 1862
BmuI ACTGGG 1 cut(s) 296
BpiI GAAGAC 1 cut(s) 536
BpmI CTGGAG 3 cut(s) 57, 222, 1143
Bpu10I CCTNAGC 2 cut(s) 151, 287
BsaHI GRCGYC 1 cut(s) 1808
BsaJI CCNNGG 3 cut(s) 470, 1176, 1570
BsaWI WCCGGW 1 cut(s) 1036
BsaXI ACNNNNNCTCC 4 cut(s) 55, 85, 1601, 1631
Bse118I RCCGGY 1 cut(s) 1036
Bse1I ACTGG 4 cut(s) 74, 302, 1545, 1606
Bse3DI GCAATG 2 cut(s) 1472, 1590
BseDI CCNNGG 3 cut(s) 470, 1176, 1570
BseGI GGATG 3 cut(s) 1363, 1367, 1636
BseMI GCAATG 2 cut(s) 1472, 1590
BseMII CTCAG 3 cut(s) 301, 911, 1187
BseNI ACTGG 4 cut(s) 74, 302, 1545, 1606
BseRI GAGGAG 4 cut(s) 224, 227, 401, 677
BseSI GKGCMC 2 cut(s) 143, 470
BseXI GCAGC 8 cut(s) 131, 295, 654, 1094, 1358, 1503, 1744, 1828
BseYI CCCAGC 1 cut(s) 418
BsgI GTGCAG 2 cut(s) 971, 1476
Bsh1236I CGCG 1 cut(s) 1334
BshFI GGCC 3 cut(s) 141, 468, 559
BshNI GGYRCC 1 cut(s) 155
BshTI ACCGGT 1 cut(s) 1036
BsiSI CCGG 2 cut(s) 27, 1037
BsmAI GTCTC 3 cut(s) 54, 830, 1290
BsmBI CGTCTC 1 cut(s) 54
BsmI GAATGC 2 cut(s) 30, 619
BsnI GGCC 3 cut(s) 141, 468, 559
Bsp120I GGGCCC 2 cut(s) 139, 466
Bsp1286I GDGCHC 2 cut(s) 143, 470
Bsp143I GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
BspACI CCGC 5 cut(s) 6, 123, 236, 538, 973
BspANI GGCC 3 cut(s) 141, 468, 559
BspCNI CTCAG 3 cut(s) 300, 910, 1188
BspFNI CGCG 1 cut(s) 1334
BspLI GGNNCC 5 cut(s) 140, 141, 157, 187, 468
BspMAI CTGCAG 1 cut(s) 1861
BspPI GGATC 2 cut(s) 467, 1100
BspT107I GGYRCC 1 cut(s) 155
BspTI CTTAAG 1 cut(s) 1213
BsrBI CCGCTC 1 cut(s) 125
BsrDI GCAATG 2 cut(s) 1472, 1590
BsrFI RCCGGY 1 cut(s) 1036
BsrI ACTGG 4 cut(s) 74, 302, 1545, 1606
BssAI RCCGGY 1 cut(s) 1036
BssECI CCNNGG 3 cut(s) 470, 1176, 1570
BssMI GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
BssNI GRCGYC 1 cut(s) 1808
BssT1I CCWWGG 3 cut(s) 470, 1176, 1570
Bst4CI ACNGT 6 cut(s) 398, 565, 686, 841, 1785, 1838
BstACI GRCGYC 1 cut(s) 1808
BstAFI CTTAAG 1 cut(s) 1213
BstC8I GCNNGC 3 cut(s) 933, 1344, 1474
BstDEI CTNAG 6 cut(s) 151, 287, 330, 897, 1196, 1896
BstEII GGTNACC 1 cut(s) 1675
BstF5I GGATG 3 cut(s) 1363, 1367, 1636
BstFNI CGCG 1 cut(s) 1334
BstKTI GATC 7 cut(s) 21, 360, 462, 980, 1108, 1126, 1690
BstMAI GTCTC 3 cut(s) 54, 830, 1290
BstMBI GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
BstMWI GCNNNNNNNGC 4 cut(s) 116, 147, 1522, 1850
BstPI GGTNACC 1 cut(s) 1675
BstSFI CTRYAG 1 cut(s) 1857
BstSLI GKGCMC 2 cut(s) 143, 470
BstUI CGCG 1 cut(s) 1334
BstV1I GCAGC 8 cut(s) 131, 295, 654, 1094, 1358, 1503, 1744, 1828
BstV2I GAAGAC 1 cut(s) 536
BstX2I RGATCY 2 cut(s) 357, 1105
BstYI RGATCY 2 cut(s) 357, 1105
BsuI GTATCC 1 cut(s) 700
BsuRI GGCC 3 cut(s) 141, 468, 559
BtsCI GGATG 3 cut(s) 1363, 1367, 1636
BtsI GCAGTG 1 cut(s) 983
BtsIMutI CAGTG 5 cut(s) 570, 691, 933, 983, 1599
Cac8I GCNNGC 3 cut(s) 933, 1344, 1474
CaiI CAGNNNCTG 1 cut(s) 941
Cfr10I RCCGGY 1 cut(s) 1036
Cfr13I GGNCC 5 cut(s) 139, 140, 466, 467, 1315
CseI GACGC 1 cut(s) 1797
Csp6I GTAC 3 cut(s) 305, 1034, 1791
CspAI ACCGGT 1 cut(s) 1036
CviAII CATG 7 cut(s) 672, 743, 1013, 1094, 1312, 1526, 1751
CviQI GTAC 3 cut(s) 305, 1034, 1791
DdeI CTNAG 6 cut(s) 151, 287, 330, 897, 1196, 1896
DpnI GATC 7 cut(s) 20, 359, 461, 979, 1107, 1125, 1689
DpnII GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
DraIII CACNNNGTG 1 cut(s) 833
DriI GACNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 557
Eam1105I GACNNNNNGTC 1 cut(s) 46
Eco130I CCWWGG 3 cut(s) 470, 1176, 1570
Eco24I GRGCYC 2 cut(s) 143, 470
Eco47I GGWCC 1 cut(s) 1315
Eco57I CTGAAG 1 cut(s) 858
Eco91I GGTNACC 1 cut(s) 1675
EcoO109I RGGNCCY 3 cut(s) 139, 466, 467
EcoO65I GGTNACC 1 cut(s) 1675
EcoT14I CCWWGG 3 cut(s) 470, 1176, 1570
EcoT22I ATGCAT 2 cut(s) 529, 1592
EcoT38I GRGCYC 2 cut(s) 143, 470
ErhI CCWWGG 3 cut(s) 470, 1176, 1570
Esp3I CGTCTC 1 cut(s) 54
FaeI CATG 7 cut(s) 675, 746, 1016, 1097, 1315, 1529, 1754
FalI AAGNNNNNCTT 2 cut(s) 1606, 1638
FatI CATG 7 cut(s) 671, 742, 1012, 1093, 1311, 1525, 1750
FbaI TGATCA 2 cut(s) 18, 1687
FokI GGATG 3 cut(s) 1370, 1374, 1643
FriOI GRGCYC 2 cut(s) 143, 470
FspBI CTAG 6 cut(s) 95, 381, 456, 764, 1103, 1431
GsaI CCCAGC 1 cut(s) 422
GsuI CTGGAG 3 cut(s) 57, 222, 1143
HaeIII GGCC 3 cut(s) 141, 468, 559
HapII CCGG 2 cut(s) 27, 1037
HgaI GACGC 1 cut(s) 1797
Hin1I GRCGYC 1 cut(s) 1808
Hin1II CATG 7 cut(s) 675, 746, 1016, 1097, 1315, 1529, 1754
HincII GTYRAC 1 cut(s) 298
HindII GTYRAC 1 cut(s) 298
HindIII AAGCTT 3 cut(s) 164, 647, 915
HpaII CCGG 2 cut(s) 27, 1037
HphI GGTGA 8 cut(s) 70, 302, 365, 410, 591, 722, 740, 1882
Hpy166II GTNNAC 3 cut(s) 102, 298, 1748
Hpy188I TCNGA 5 cut(s) 18, 88, 190, 877, 1829
Hpy188III TCNNGA 4 cut(s) 59, 201, 501, 1160
Hpy8I GTNNAC 3 cut(s) 102, 298, 1748
Hpy99I CGWCG 1 cut(s) 135
HpyAV CCTTC 1 cut(s) 425
HpyCH4III ACNGT 6 cut(s) 398, 565, 686, 841, 1785, 1838
HpyCH4IV ACGT 2 cut(s) 336, 829
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 147, 1522, 1850
HpyF3I CTNAG 6 cut(s) 151, 287, 330, 897, 1196, 1896
HpySE526I ACGT 2 cut(s) 336, 829
Hsp92I GRCGYC 1 cut(s) 1808
Hsp92II CATG 7 cut(s) 675, 746, 1016, 1097, 1315, 1529, 1754
Ksp22I TGATCA 2 cut(s) 18, 1687
Kzo9I GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
LmnI GCTCC 4 cut(s) 191, 664, 706, 1162
Lsp1109I GCAGC 8 cut(s) 131, 295, 654, 1094, 1358, 1503, 1744, 1828
LweI GCATC 5 cut(s) 514, 688, 1231, 1577, 1862
MaeI CTAG 6 cut(s) 95, 381, 456, 764, 1103, 1431
MaeII ACGT 2 cut(s) 336, 829
MaeIII GTNAC 4 cut(s) 76, 710, 1675, 1832
MalI GATC 7 cut(s) 20, 359, 461, 979, 1107, 1125, 1689
MbiI CCGCTC 1 cut(s) 125
MboI GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
MboII GAAGA 9 cut(s) 161, 164, 536, 615, 779, 972, 1212, 1646, 1726
MflI RGATCY 2 cut(s) 357, 1105
MhlI GDGCHC 2 cut(s) 143, 470
MluCI AATT 9 cut(s) 921, 993, 1077, 1203, 1255, 1399, 1736, 1797, 1822
MlyI GAGTC 2 cut(s) 303, 566
MmeI TCCRAC 2 cut(s) 111, 1866
Mph1103I ATGCAT 2 cut(s) 529, 1592
MseI TTAA 4 cut(s) 956, 1131, 1214, 1413
MslI CAYNNNNRTG 1 cut(s) 1310
MspA1I CMGCKG 1 cut(s) 1349
MspCI CTTAAG 1 cut(s) 1213
MspI CCGG 2 cut(s) 27, 1037
Mva1269I GAATGC 2 cut(s) 30, 619
MvnI CGCG 1 cut(s) 1334
MwoI GCNNNNNNNGC 4 cut(s) 116, 147, 1522, 1850
NdeII GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
NlaIII CATG 7 cut(s) 675, 746, 1016, 1097, 1315, 1529, 1754
NlaIV GGNNCC 5 cut(s) 140, 141, 157, 187, 468
NmuCI GTSAC 2 cut(s) 76, 710
NsiI ATGCAT 2 cut(s) 529, 1592
PctI GAATGC 2 cut(s) 30, 619
PfeI GAWTC 9 cut(s) 9, 323, 962, 1027, 1067, 1167, 1329, 1660, 1873
PinAI ACCGGT 1 cut(s) 1036
PleI GAGTC 2 cut(s) 302, 566
PpsI GAGTC 2 cut(s) 302, 566
Psp1406I AACGTT 1 cut(s) 336
PspEI GGTNACC 1 cut(s) 1675
PspFI CCCAGC 1 cut(s) 418
PspN4I GGNNCC 5 cut(s) 140, 141, 157, 187, 468
PspOMI GGGCCC 2 cut(s) 139, 466
PspPI GGNCC 5 cut(s) 139, 140, 466, 467, 1315
PstI CTGCAG 1 cut(s) 1861
PstNI CAGNNNCTG 1 cut(s) 941
PsuI RGATCY 2 cut(s) 357, 1105
PvuII CAGCTG 1 cut(s) 1349
RsaI GTAC 3 cut(s) 306, 1035, 1792
RsaNI GTAC 3 cut(s) 305, 1034, 1791
RseI CAYNNNNRTG 1 cut(s) 1310
SaqAI TTAA 4 cut(s) 956, 1131, 1214, 1413
Sau3AI GATC 7 cut(s) 18, 357, 459, 977, 1105, 1123, 1687
Sau96I GGNCC 5 cut(s) 139, 140, 466, 467, 1315
ScaI AGTACT 1 cut(s) 306
SchI GAGTC 2 cut(s) 303, 566
SduI GDGCHC 2 cut(s) 143, 470
SfaNI GCATC 5 cut(s) 514, 688, 1231, 1577, 1862
SfcI CTRYAG 1 cut(s) 1857
SinI GGWCC 1 cut(s) 1315
SmiMI CAYNNNNRTG 1 cut(s) 1310
SmlI CTYRAG 1 cut(s) 1213
SmoI CTYRAG 1 cut(s) 1213
Sse9I AATT 9 cut(s) 921, 993, 1077, 1203, 1255, 1399, 1736, 1797, 1822
SsiI CCGC 5 cut(s) 6, 123, 236, 538, 973
SspMI CTAG 6 cut(s) 95, 381, 456, 764, 1103, 1431
StyI CCWWGG 3 cut(s) 470, 1176, 1570
TaaI ACNGT 6 cut(s) 398, 565, 686, 841, 1785, 1838
TaiI ACGT 2 cut(s) 339, 832
TaqI TCGA 5 cut(s) 39, 60, 247, 798, 1239
TasI AATT 9 cut(s) 921, 993, 1077, 1203, 1255, 1399, 1736, 1797, 1822
TatI WGTACW 1 cut(s) 304
TauI GCSGC 4 cut(s) 125, 239, 540, 976
TfiI GAWTC 9 cut(s) 9, 323, 962, 1027, 1067, 1167, 1329, 1660, 1873
Tru1I TTAA 4 cut(s) 956, 1131, 1214, 1413
Tru9I TTAA 4 cut(s) 956, 1131, 1214, 1413
TscAI CASTG 5 cut(s) 570, 691, 933, 990, 1606
TseFI GTSAC 2 cut(s) 76, 710
TseI GCWGC 8 cut(s) 119, 283, 667, 1082, 1346, 1516, 1757, 1841
Tsp45I GTSAC 2 cut(s) 76, 710
TspDTI ATGAA 6 cut(s) 542, 759, 875, 1550, 1647, 1767
TspGWI ACGGA 1 cut(s) 148
TspRI CASTG 5 cut(s) 570, 691, 933, 990, 1606
Vha464I CTTAAG 1 cut(s) 1213
VpaK11BI GGWCC 1 cut(s) 1315
XapI RAATTY 2 cut(s) 1255, 1822
XcmI CCANNNNNNNNNTGG 1 cut(s) 1309
XspI CTAG 6 cut(s) 95, 381, 456, 764, 1103, 1431
ZrmI AGTACT 1 cut(s) 306
Zsp2I ATGCAT 2 cut(s) 529, 1592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.