Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004209

Physical Location & Seq

Genomic Coordinates Reverse (-)

63664411 .. 63668691

Gene Structure 4281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG383800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGTGCGGAATCGCTCTGATCATCTCCGGCATTCGCTTCGACTTATCGTCTCTGCTTTTCGACACCACACCTCCGGTCATAAACTCCGACCAACTAGAGTTCACTGTAGCCGACCTCGCAGCCGCTCTGCGACGGAGGGGCCCAGATAGCTTAGGCGCCAAGAAGCTTCTTCTTCATTCATCAGGTTCCGAAATCGTGTCTGGAGTAGAGGCGGAGTTCAGCAATTGCTTCTCTGCGGCAAATGGTCGAACACCTTGTATGCATTTTTTTGGTGCTACTTTGCAGCTCAGGGGAGTGAACGCAGTAGTTCAGCCATTGATTGATTCGTCTAAGAATGTTCTTGTTTATAATGGTGAGATCTTTGGGGGGATTGAGATTGCTAGTGAGGAGAATGACGGTGAAGTTCTAATGGGGTTGCTGGGAGGGTGTGAAGGTTGTGTGCCGAATGTTGTTTCTAGGATCAAGGGCCCTTGGGCTATCATCTATTGGCAGGAAAGTTCAAGAACATTATGGTTTGGGAGAGATGCATTTGGTCGCCGGAGTCTTCTTGTTCATTGGCCGACAGTGGAGGACTCTCGGTTTCTGTTATCATCAGTATCACCCGTTGCTTCAAATGAGCATTCTTCTGCTGAAAATGGAACAACCAAGCTTGGTTTTTGGGAGGAGCTGCCATGTGGAATATACAGTGTATCCATAGATGCTCCCGATGGTGACGGGAGTTTGGTTGGTGAAGTGAAAAAGCATGAATGGACTAATGCCATGCTAGAAGAACTGATAAAATGGGAGAGAACATCTGTCGAACCCAAACCCGAAGAGTTGCATAGTTCACGTTGTGAGACTGTAAGAGGGCAACACGATATGAACTCACTTACTTCAGATATAGTGCCAATGCCATCTAAGTCAGGCAATATACAAGCTTCAATTTCAGTGCCAGCAGAGGCTGTGCTGATTGCTTTAAGGGAATCAGTTTTGCGGCGATCTTCACTGCACAGAATTTTTCAGGCAAGTATGCATGATGTGGAAAAGAATCTTGTACCGGTGGCAGTTCTTTTTTCTGGTGGATTGGACTCTATGATAATTGCAGCATTGTTGCATGAGTGCCTAGATCCAAGCTATGAGATTGATCTACTTAATGTGAGCTTCGATGGTCAGTCTGCTCCAGATAGAATCTCTGCCAAGGCAGGAGTGAGCGAACTGAGAAGAATTGCACCTTTAAGAAAGTGGAAACTAGTGGAGATTGATGCTGATTTATCAAATTTGACCTTTGAAACAAAGCGTGTATTGTCTCTCATAAACCCTGCCAACACCTACATGGACCTAAATATAGGAATTGCGTTATGGCTGGCAGCTGGTGGGGATGGATGGGTTTATGAGGAAAATAGCAAATATAATGATGAGAATCGTCAAGGTGTTAAATACAAGTCAAAGGCTAGGATTGTCCTTGTTGGTTCAGGTGCAGATGAGCAATGTGCTGGCTATGGTAGGCACAGAACAAAATATAGAAGTGGAAGTTGGCTGCGACTGCATGAGGAAATGAAACTAGATATGCAAAGAATATGGAAAAGAAACCTTGGTAGAGATGATAGATGCATTGCTGACACTGGCAAGGAGGTATTGCTAAGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004066 GO:0005488 GO:0005515 GO:0006082 GO:0006520 GO:0006528 GO:0006529 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009066 GO:0009067 GO:0009987 GO:0016053 GO:0016874 GO:0016879 GO:0016884 GO:0019752 GO:0032787 GO:0034641 GO:0042802 GO:0042803 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0046394 GO:0046983 GO:0071704 GO:0072330 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asn_synthase GATase_7

Protein Analysis

542

Amino Acids

59.73

Weight (kDa)

5.59

Isoelectric Point (pI)

45.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATase_7	PF13537	100 - 198	3.2e-09	Glutamine amidotransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03667 AT2G03667
fragaria_vesca	FvH4_4g29880 FvH4_4g29880 FvH4_4g29880 FvH4_4g29880 FvH4_4g29880 FvH4_4g29880 FvH4_4g29880 FvH4_4g29880
malus_domestica	MD13G1061700.v1.1 MD16G1060200.v1.1
prunus_persica	Prupe.1G288300_v2.0.a1 Prupe.1G288300_v2.0.a1 Prupe.1G288300_v2.0.a1 Prupe.1G288300_v2.0.a1
pyrus_communis	pycom16g05240
rosa_chinensis	RchiOBHm_Chr4g0438141
rosa_laevigata	RLG00000006385
rosa_multiflora	Rmu_sc0004728.1_g000004 Rmu_sc0020161.1_g000004
rosa_roxburghii	Rroxscaffold_5G00379270
rosa_rugosa	Rorug04G0307300 Rorug04G0307400 Rorug04G0307500 Rorug04G0307600 Rorug04G0307700
rosa_samantha	Rh4AG358800 Rh4BG369700 Rh4CG383800 Rh4DG364600
rosa_wichuraiana	Rw0G006330 Rw0G016270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	348
AccB1I	GGYRCC	1 cut(s)	155
AccBSI	CCGCTC	1 cut(s)	125
AciI	CCGC	5 cut(s)	6, 123, 212, 236, 973
AclWI	GGATC	2 cut(s)	467, 1100
AcoI	YGGCCR	1 cut(s)	557
AcsI	RAATTY	2 cut(s)	993, 1255
AcuI	CTGAAG	1 cut(s)	858
AcyI	GRCGYC	1 cut(s)	156
AdeI	CACNNNGTG	1 cut(s)	833
AfaI	GTAC	1 cut(s)	1035
AgeI	ACCGGT	1 cut(s)	1036
AgsI	TTSAA	4 cut(s)	501, 612, 921, 1268
AhdI	GACNNNNNGTC	1 cut(s)	46
AhlI	ACTAGT	1 cut(s)	1228
AjuI	GAANNNNNNNTTGG	2 cut(s)	1495, 1527
AluBI	AGCT	9 cut(s)	150, 166, 286, 649, 667, 917, 1113, 1140, 1349
AluI	AGCT	9 cut(s)	150, 166, 286, 649, 667, 917, 1113, 1140, 1349
Alw26I	GTCTC	3 cut(s)	54, 830, 1290
AlwI	GGATC	2 cut(s)	467, 1100
AlwNI	CAGNNNCTG	1 cut(s)	941
AoxI	GGCC	3 cut(s)	139, 466, 557
ApaI	GGGCCC	2 cut(s)	143, 470
ApeKI	GCWGC	6 cut(s)	119, 283, 667, 1082, 1346, 1516
ApoI	RAATTY	2 cut(s)	993, 1255
AsiGI	ACCGGT	1 cut(s)	1036
AspLEI	GCGC	1 cut(s)	158
AspS9I	GGNCC	5 cut(s)	139, 140, 466, 467, 1315
AsuHPI	GGTGA	5 cut(s)	365, 410, 591, 722, 740
AvaII	GGWCC	1 cut(s)	1315
BaeGI	GKGCMC	2 cut(s)	143, 470
BanI	GGYRCC	1 cut(s)	155
BanII	GRGCYC	2 cut(s)	143, 470
BbsI	GAAGAC	1 cut(s)	536
BbvI	GCAGC	6 cut(s)	131, 295, 654, 1094, 1358, 1503
BccI	CCATC	5 cut(s)	701, 901, 1139, 1352, 1356
BcgI	CGANNNNNNTGC	2 cut(s)	19, 53
BciVI	GTATCC	1 cut(s)	700
BclI	TGATCA	1 cut(s)	18
BcoDI	GTCTC	3 cut(s)	54, 830, 1290
BcuI	ACTAGT	1 cut(s)	1228
BfaI	CTAG	8 cut(s)	95, 381, 456, 764, 1103, 1229, 1431, 1541
BfmI	CTRYAG	1 cut(s)	105
BfoI	RGCGCY	1 cut(s)	159
BfuI	GTATCC	1 cut(s)	700
BglII	AGATCT	1 cut(s)	357
BisI	GCNGC	9 cut(s)	120, 123, 237, 284, 668, 974, 1083, 1347, 1517
BlsI	GCNGC	9 cut(s)	121, 124, 238, 285, 669, 975, 1084, 1348, 1518
Bme18I	GGWCC	1 cut(s)	1315
BmeRI	GACNNNNNGTC	1 cut(s)	46
BmgT120I	GGNCC	5 cut(s)	139, 140, 466, 467, 1315
BmiI	GGNNCC	5 cut(s)	140, 141, 157, 187, 468
BmsI	GCATC	4 cut(s)	514, 688, 1231, 1577
BpiI	GAAGAC	1 cut(s)	536
BpmI	CTGGAG	2 cut(s)	222, 1143
Bpu10I	CCTNAGC	2 cut(s)	151, 287
BsaBI	GATNNNNATC	1 cut(s)	1398
BsaHI	GRCGYC	1 cut(s)	156
BsaJI	CCNNGG	3 cut(s)	470, 1176, 1570
BsaWI	WCCGGW	2 cut(s)	73, 1036
BsaXI	ACNNNNNCTCC	2 cut(s)	55, 85
Bse118I	RCCGGY	1 cut(s)	1036
Bse1I	ACTGG	1 cut(s)	1606
Bse3DI	GCAATG	2 cut(s)	1472, 1590
Bse8I	GATNNNNATC	1 cut(s)	1398
BseDI	CCNNGG	3 cut(s)	470, 1176, 1570
BseGI	GGATG	2 cut(s)	1363, 1367
BseJI	GATNNNNATC	1 cut(s)	1398
BseMI	GCAATG	2 cut(s)	1472, 1590
BseMII	CTCAG	2 cut(s)	301, 1187
BseNI	ACTGG	1 cut(s)	1606
BseRI	GAGGAG	2 cut(s)	401, 677
BseSI	GKGCMC	2 cut(s)	143, 470
BseXI	GCAGC	6 cut(s)	131, 295, 654, 1094, 1358, 1503
BseYI	CCCAGC	1 cut(s)	418
BsgI	GTGCAG	2 cut(s)	971, 1476
BshFI	GGCC	3 cut(s)	141, 468, 559
BshNI	GGYRCC	1 cut(s)	155
BshTI	ACCGGT	1 cut(s)	1036
BsiSI	CCGG	4 cut(s)	27, 74, 538, 1037
BsmAI	GTCTC	3 cut(s)	54, 830, 1290
BsmBI	CGTCTC	1 cut(s)	54
BsmI	GAATGC	2 cut(s)	30, 619
BsnI	GGCC	3 cut(s)	141, 468, 559
Bsp120I	GGGCCC	2 cut(s)	139, 466
Bsp1286I	GDGCHC	2 cut(s)	143, 470
Bsp143I	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
BspACI	CCGC	5 cut(s)	6, 123, 212, 236, 973
BspANI	GGCC	3 cut(s)	141, 468, 559
BspCNI	CTCAG	2 cut(s)	300, 1188
BspLI	GGNNCC	5 cut(s)	140, 141, 157, 187, 468
BspPI	GGATC	2 cut(s)	467, 1100
BspT107I	GGYRCC	1 cut(s)	155
BsrBI	CCGCTC	1 cut(s)	125
BsrDI	GCAATG	2 cut(s)	1472, 1590
BsrFI	RCCGGY	1 cut(s)	1036
BsrI	ACTGG	1 cut(s)	1606
BssAI	RCCGGY	1 cut(s)	1036
BssECI	CCNNGG	3 cut(s)	470, 1176, 1570
BssMI	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
BssNI	GRCGYC	1 cut(s)	156
BssT1I	CCWWGG	3 cut(s)	470, 1176, 1570
Bst4CI	ACNGT	5 cut(s)	106, 398, 565, 686, 841
Bst6I	CTCTTC	1 cut(s)	807
BstACI	GRCGYC	1 cut(s)	156
BstC8I	GCNNGC	3 cut(s)	933, 1344, 1474
BstDEI	CTNAG	6 cut(s)	151, 287, 330, 897, 1196, 1619
BstF5I	GGATG	2 cut(s)	1363, 1367
BstH2I	RGCGCY	1 cut(s)	159
BstHHI	GCGC	1 cut(s)	158
BstKTI	GATC	6 cut(s)	21, 360, 462, 980, 1108, 1126
BstMAI	GTCTC	3 cut(s)	54, 830, 1290
BstMBI	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
BstMWI	GCNNNNNNNGC	3 cut(s)	116, 147, 1522
BstSFI	CTRYAG	1 cut(s)	105
BstSLI	GKGCMC	2 cut(s)	143, 470
BstV1I	GCAGC	6 cut(s)	131, 295, 654, 1094, 1358, 1503
BstV2I	GAAGAC	1 cut(s)	536
BstX2I	RGATCY	2 cut(s)	357, 1105
BstYI	RGATCY	2 cut(s)	357, 1105
BsuI	GTATCC	1 cut(s)	700
BsuRI	GGCC	3 cut(s)	141, 468, 559
BtsCI	GGATG	2 cut(s)	1363, 1367
BtsI	GCAGTG	1 cut(s)	983
BtsIMutI	CAGTG	6 cut(s)	102, 570, 691, 933, 983, 1599
Cac8I	GCNNGC	3 cut(s)	933, 1344, 1474
CaiI	CAGNNNCTG	1 cut(s)	941
CfoI	GCGC	1 cut(s)	158
Cfr10I	RCCGGY	1 cut(s)	1036
Cfr13I	GGNCC	5 cut(s)	139, 140, 466, 467, 1315
Csp6I	GTAC	1 cut(s)	1034
CspAI	ACCGGT	1 cut(s)	1036
CviAII	CATG	7 cut(s)	672, 743, 760, 1013, 1094, 1312, 1526
CviQI	GTAC	1 cut(s)	1034
DdeI	CTNAG	6 cut(s)	151, 287, 330, 897, 1196, 1619
DinI	GGCGCC	1 cut(s)	157
DpnI	GATC	6 cut(s)	20, 359, 461, 979, 1107, 1125
DpnII	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
DraIII	CACNNNGTG	1 cut(s)	833
DriI	GACNNNNNGTC	1 cut(s)	46
EaeI	YGGCCR	1 cut(s)	557
Eam1104I	CTCTTC	1 cut(s)	807
Eam1105I	GACNNNNNGTC	1 cut(s)	46
EarI	CTCTTC	1 cut(s)	807
EciI	GGCGGA	1 cut(s)	227
Eco130I	CCWWGG	3 cut(s)	470, 1176, 1570
Eco24I	GRGCYC	2 cut(s)	143, 470
Eco47I	GGWCC	1 cut(s)	1315
Eco57I	CTGAAG	1 cut(s)	858
EcoO109I	RGGNCCY	3 cut(s)	139, 466, 467
EcoT14I	CCWWGG	3 cut(s)	470, 1176, 1570
EcoT22I	ATGCAT	4 cut(s)	264, 529, 1014, 1592
EcoT38I	GRGCYC	2 cut(s)	143, 470
EgeI	GGCGCC	1 cut(s)	157
EheI	GGCGCC	1 cut(s)	157
ErhI	CCWWGG	3 cut(s)	470, 1176, 1570
Esp3I	CGTCTC	1 cut(s)	54
FaeI	CATG	7 cut(s)	675, 746, 763, 1016, 1097, 1315, 1529
FatI	CATG	7 cut(s)	671, 742, 759, 1012, 1093, 1311, 1525
FbaI	TGATCA	1 cut(s)	18
Fnu4HI	GCNGC	9 cut(s)	120, 123, 237, 284, 668, 974, 1083, 1347, 1517
FokI	GGATG	2 cut(s)	1370, 1374
FriOI	GRGCYC	2 cut(s)	143, 470
Fsp4HI	GCNGC	9 cut(s)	120, 123, 237, 284, 668, 974, 1083, 1347, 1517
FspBI	CTAG	8 cut(s)	95, 381, 456, 764, 1103, 1229, 1431, 1541
GlaI	GCGC	1 cut(s)	157
GluI	GCNGC	9 cut(s)	120, 123, 237, 284, 668, 974, 1083, 1347, 1517
GsaI	CCCAGC	1 cut(s)	422
GsuI	CTGGAG	2 cut(s)	222, 1143
HaeII	RGCGCY	1 cut(s)	159
HaeIII	GGCC	3 cut(s)	141, 468, 559
HapII	CCGG	4 cut(s)	27, 74, 538, 1037
HhaI	GCGC	1 cut(s)	158
Hin1I	GRCGYC	1 cut(s)	156
Hin1II	CATG	7 cut(s)	675, 746, 763, 1016, 1097, 1315, 1529
Hin6I	GCGC	1 cut(s)	156
HinP1I	GCGC	1 cut(s)	156
HindIII	AAGCTT	3 cut(s)	164, 647, 915
HinfI	GANTC	9 cut(s)	9, 323, 541, 572, 962, 1027, 1067, 1167, 1399
HpaII	CCGG	4 cut(s)	27, 74, 538, 1037
HphI	GGTGA	5 cut(s)	365, 410, 591, 722, 740
Hpy166II	GTNNAC	3 cut(s)	102, 298, 827
Hpy188I	TCNGA	4 cut(s)	18, 88, 190, 877
Hpy188III	TCNNGA	4 cut(s)	201, 501, 704, 1160
Hpy8I	GTNNAC	3 cut(s)	102, 298, 827
Hpy99I	CGWCG	1 cut(s)	135
HpyAV	CCTTC	1 cut(s)	425
HpyCH4III	ACNGT	5 cut(s)	106, 398, 565, 686, 841
HpyCH4IV	ACGT	1 cut(s)	829
HpyF10VI	GCNNNNNNNGC	3 cut(s)	116, 147, 1522
HpyF3I	CTNAG	6 cut(s)	151, 287, 330, 897, 1196, 1619
HpySE526I	ACGT	1 cut(s)	829
Hsp92I	GRCGYC	1 cut(s)	156
Hsp92II	CATG	7 cut(s)	675, 746, 763, 1016, 1097, 1315, 1529
HspAI	GCGC	1 cut(s)	156
KasI	GGCGCC	1 cut(s)	155
Ksp22I	TGATCA	1 cut(s)	18
Kzo9I	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
LmnI	GCTCC	3 cut(s)	664, 706, 1162
Lsp1109I	GCAGC	6 cut(s)	131, 295, 654, 1094, 1358, 1503
LweI	GCATC	4 cut(s)	514, 688, 1231, 1577
MaeI	CTAG	8 cut(s)	95, 381, 456, 764, 1103, 1229, 1431, 1541
MaeII	ACGT	1 cut(s)	829
MaeIII	GTNAC	1 cut(s)	710
MalI	GATC	6 cut(s)	20, 359, 461, 979, 1107, 1125
MbiI	CCGCTC	1 cut(s)	125
MboI	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
MboII	GAAGA	8 cut(s)	161, 164, 536, 615, 779, 824, 972, 1212
MfeI	CAATTG	1 cut(s)	223
MflI	RGATCY	2 cut(s)	357, 1105
MhlI	GDGCHC	2 cut(s)	143, 470
MluCI	AATT	7 cut(s)	223, 921, 993, 1077, 1203, 1255, 1329
Mly113I	GGCGCC	1 cut(s)	156
MlyI	GAGTC	3 cut(s)	550, 566, 1061
MmeI	TCCRAC	1 cut(s)	111
Mph1103I	ATGCAT	4 cut(s)	264, 529, 1014, 1592
MseI	TTAA	4 cut(s)	956, 1131, 1214, 1413
MslI	CAYNNNNRTG	1 cut(s)	1310
MspA1I	CMGCKG	1 cut(s)	1349
MspI	CCGG	4 cut(s)	27, 74, 538, 1037
MunI	CAATTG	1 cut(s)	223
Mva1269I	GAATGC	2 cut(s)	30, 619
MwoI	GCNNNNNNNGC	3 cut(s)	116, 147, 1522
NarI	GGCGCC	1 cut(s)	156
NdeII	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
NlaIII	CATG	7 cut(s)	675, 746, 763, 1016, 1097, 1315, 1529
NlaIV	GGNNCC	5 cut(s)	140, 141, 157, 187, 468
NmuCI	GTSAC	1 cut(s)	710
NsiI	ATGCAT	4 cut(s)	264, 529, 1014, 1592
PctI	GAATGC	2 cut(s)	30, 619
PfeI	GAWTC	6 cut(s)	9, 323, 962, 1027, 1167, 1399
PinAI	ACCGGT	1 cut(s)	1036
PkrI	GCNGC	9 cut(s)	121, 124, 238, 285, 669, 975, 1084, 1348, 1518
PleI	GAGTC	3 cut(s)	549, 566, 1061
PluTI	GGCGCC	1 cut(s)	159
PpsI	GAGTC	3 cut(s)	549, 566, 1061
PsiI	TTATAA	1 cut(s)	348
PspFI	CCCAGC	1 cut(s)	418
PspN4I	GGNNCC	5 cut(s)	140, 141, 157, 187, 468
PspOMI	GGGCCC	2 cut(s)	139, 466
PspPI	GGNCC	5 cut(s)	139, 140, 466, 467, 1315
PstNI	CAGNNNCTG	1 cut(s)	941
PsuI	RGATCY	2 cut(s)	357, 1105
PvuII	CAGCTG	1 cut(s)	1349
RsaI	GTAC	1 cut(s)	1035
RsaNI	GTAC	1 cut(s)	1034
RseI	CAYNNNNRTG	1 cut(s)	1310
SaqAI	TTAA	4 cut(s)	956, 1131, 1214, 1413
SatI	GCNGC	9 cut(s)	120, 123, 237, 284, 668, 974, 1083, 1347, 1517
Sau3AI	GATC	6 cut(s)	18, 357, 459, 977, 1105, 1123
Sau96I	GGNCC	5 cut(s)	139, 140, 466, 467, 1315
SchI	GAGTC	3 cut(s)	550, 566, 1061
SduI	GDGCHC	2 cut(s)	143, 470
SfaNI	GCATC	4 cut(s)	514, 688, 1231, 1577
SfcI	CTRYAG	1 cut(s)	105
SfoI	GGCGCC	1 cut(s)	157
SinI	GGWCC	1 cut(s)	1315
SmiMI	CAYNNNNRTG	1 cut(s)	1310
SpeI	ACTAGT	1 cut(s)	1228
Sse9I	AATT	7 cut(s)	223, 921, 993, 1077, 1203, 1255, 1329
SsiI	CCGC	5 cut(s)	6, 123, 212, 236, 973
SspDI	GGCGCC	1 cut(s)	155
SspMI	CTAG	8 cut(s)	95, 381, 456, 764, 1103, 1229, 1431, 1541
StyI	CCWWGG	3 cut(s)	470, 1176, 1570
TaaI	ACNGT	5 cut(s)	106, 398, 565, 686, 841
TaiI	ACGT	1 cut(s)	832
TaqI	TCGA	5 cut(s)	39, 60, 247, 798, 1143
TasI	AATT	7 cut(s)	223, 921, 993, 1077, 1203, 1255, 1329
TauI	GCSGC	3 cut(s)	125, 239, 976
TfiI	GAWTC	6 cut(s)	9, 323, 962, 1027, 1167, 1399
Tru1I	TTAA	4 cut(s)	956, 1131, 1214, 1413
Tru9I	TTAA	4 cut(s)	956, 1131, 1214, 1413
TscAI	CASTG	6 cut(s)	109, 570, 691, 933, 990, 1606
TseFI	GTSAC	1 cut(s)	710
TseI	GCWGC	6 cut(s)	119, 283, 667, 1082, 1346, 1516
Tsp45I	GTSAC	1 cut(s)	710
TspDTI	ATGAA	6 cut(s)	164, 168, 542, 759, 875, 1550
TspGWI	ACGGA	1 cut(s)	148
TspRI	CASTG	6 cut(s)	109, 570, 691, 933, 990, 1606
VpaK11BI	GGWCC	1 cut(s)	1315
XapI	RAATTY	2 cut(s)	993, 1255
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1309
XspI	CTAG	8 cut(s)	95, 381, 456, 764, 1103, 1229, 1431, 1541
Zsp2I	ATGCAT	4 cut(s)	264, 529, 1014, 1592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.