Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007676

Physical Location & Seq

Genomic Coordinates Forward (+)

6045579 .. 6046045

Gene Structure 467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G14270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 345 bp

ATGAGAAAGAGTTACCTTCACAATTACAGGTCTTCCGATTATCTCACAATCTCGATGTTGATGGCTGATAATTCTTCCGGCCAATCTCTTTCTCATCGCAAACCTCCAACATCTTCTCCTTCCTCTATATCCACCACTGTTTCTTCTCCTAAATCGCCATTTCGTCTTCCTCCGATTTCTTCATCGGCCGATGTAGCTATGACGTCGAGGGAGGAGTGTAGAGAGGTTGAAAGAGAAGGTGATGGTTATTTTGTTTATTGTAAGAGAGGAAGAAGAGAAGCTAGAGAGGTTATATCAAGTTGGACTCCAATGATAATGTTAGATGAGCAAACAAAAAAGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009888 GO:0009987 GO:0010033 GO:0010374 GO:0010440 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0090558 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

114

Amino Acids

12.92

Weight (kDa)

9.12

Isoelectric Point (pI)

63.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07160 AT1G29620 AT1G32720 AT2G14270 AT2G30020
fragaria_vesca	FvH4_7g24650 FvH4_7g24650
malus_domestica	MD01G1154600.v1.1 MD07G1223600.v1.1 MD07G1223700.v1.1
prunus_persica	Prupe.2G252200_v2.0.a1
pyrus_communis	pycom01g17200 pycom07g20220
rosa_chinensis	RchiOBHm_Chr1g0370481
rosa_laevigata	RLG00000027036
rosa_multiflora	Rmu_sc0002558.1_g000010
rosa_roxburghii	Rroxscaffold_4G00286520
rosa_rugosa	Rorug01G0357100.1 Rorug01G0357200
rosa_samantha	Rh1AG365700 Rh1BG328600 Rh1CG341700 Rh1DG358900
rosa_wichuraiana	Rw1G032220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	206
AcoI	YGGCCR	2 cut(s)	79, 186
AcyI	GRCGYC	1 cut(s)	203
AgsI	TTSAA	1 cut(s)	230
AluBI	AGCT	2 cut(s)	197, 281
AluI	AGCT	2 cut(s)	197, 281
AoxI	GGCC	2 cut(s)	79, 186
AsuHPI	GGTGA	1 cut(s)	251
BbsI	GAAGAC	2 cut(s)	24, 158
BccI	CCATC	2 cut(s)	55, 236
BfaI	CTAG	1 cut(s)	282
BpiI	GAAGAC	2 cut(s)	24, 158
BsaHI	GRCGYC	1 cut(s)	203
BsaXI	ACNNNNNCTCC	2 cut(s)	100, 130
BseRI	GAGGAG	1 cut(s)	227
BseX3I	CGGCCG	1 cut(s)	186
Bsh1285I	CGRYCG	1 cut(s)	189
BshFI	GGCC	2 cut(s)	81, 188
BsiEI	CGRYCG	1 cut(s)	189
BsiSI	CCGG	1 cut(s)	78
BsnI	GGCC	2 cut(s)	81, 188
BspANI	GGCC	2 cut(s)	81, 188
BssNI	GRCGYC	1 cut(s)	203
Bst4CI	ACNGT	1 cut(s)	139
Bst6I	CTCTTC	1 cut(s)	268
BstACI	GRCGYC	1 cut(s)	203
BstMCI	CGRYCG	1 cut(s)	189
BstMWI	GCNNNNNNNGC	1 cut(s)	194
BstV2I	GAAGAC	2 cut(s)	24, 158
BstZI	CGGCCG	1 cut(s)	186
BsuRI	GGCC	2 cut(s)	81, 188
BtgZI	GCGATG	1 cut(s)	80
BtsIMutI	CAGTG	1 cut(s)	135
CviJI	RGCY	5 cut(s)	65, 81, 188, 197, 281
CviKI_1	RGCY	5 cut(s)	65, 81, 188, 197, 281
EaeI	YGGCCR	2 cut(s)	79, 186
EagI	CGGCCG	1 cut(s)	186
Eam1104I	CTCTTC	1 cut(s)	268
EarI	CTCTTC	1 cut(s)	268
EclXI	CGGCCG	1 cut(s)	186
Eco52I	CGGCCG	1 cut(s)	186
FaiI	YATR	3 cut(s)	128, 200, 293
FspBI	CTAG	1 cut(s)	282
HaeIII	GGCC	2 cut(s)	81, 188
HapII	CCGG	1 cut(s)	78
Hin1I	GRCGYC	1 cut(s)	203
HinfI	GANTC	1 cut(s)	304
HpaII	CCGG	1 cut(s)	78
HphI	GGTGA	1 cut(s)	251
Hpy188I	TCNGA	2 cut(s)	37, 174
Hpy188III	TCNNGA	1 cut(s)	52
Hpy99I	CGWCG	1 cut(s)	208
HpyAV	CCTTC	3 cut(s)	26, 129, 230
HpyCH4III	ACNGT	1 cut(s)	139
HpyCH4IV	ACGT	1 cut(s)	203
HpyF10VI	GCNNNNNNNGC	1 cut(s)	194
HpySE526I	ACGT	1 cut(s)	203
Hsp92I	GRCGYC	1 cut(s)	203
LpnPI	CCDG	2 cut(s)	13, 91
MaeI	CTAG	1 cut(s)	282
MaeII	ACGT	1 cut(s)	203
MaeIII	GTNAC	1 cut(s)	11
MboII	GAAGA	8 cut(s)	24, 66, 105, 135, 158, 171, 282, 285
MluCI	AATT	2 cut(s)	22, 70
MlyI	GAGTC	1 cut(s)	298
MmeI	TCCRAC	2 cut(s)	131, 281
MnlI	CCTC	8 cut(s)	114, 133, 180, 201, 205, 217, 260, 280
MspI	CCGG	1 cut(s)	78
MwoI	GCNNNNNNNGC	1 cut(s)	194
PleI	GAGTC	1 cut(s)	298
PpsI	GAGTC	1 cut(s)	298
SchI	GAGTC	1 cut(s)	298
SetI	ASST	9 cut(s)	18, 32, 106, 199, 206, 228, 241, 283, 291
SgeI	CNNG	6 cut(s)	40, 64, 90, 219, 294, 309
Sse9I	AATT	2 cut(s)	22, 70
SspMI	CTAG	1 cut(s)	282
TaaI	ACNGT	1 cut(s)	139
TaiI	ACGT	1 cut(s)	206
TaqI	TCGA	2 cut(s)	53, 206
TasI	AATT	2 cut(s)	22, 70
TscAI	CASTG	1 cut(s)	142
TspDTI	ATGAA	1 cut(s)	171
TspRI	CASTG	1 cut(s)	142
XspI	CTAG	1 cut(s)	282
ZraI	GACGTC	1 cut(s)	204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.