Prupe.2G252200_v2.0.a1

phosphatase 2C

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
26622888 .. 26625180
2293 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G252200.1

Sequence Viewer

Length: 1116 bp
ATGCCTTGCGCTTTGGTGGCGCCAAACTCTCCGATTTTCTCACCGTCGAAAATTCCTTCCATCTTTTTCAGATCATCATCTTTATCTTCTCCTTCTTCATGTTCTTCCCCTAGAGTCCTCCATGGCCCGCCTCCTACGCCGTCACGATCTTCGTCTTCGACAGCGCCTTTAGAGTCTCGGTTTCAGAGGCACGTGATAAGTGGCTGCAAGACGGAGCCTTCGGGTTTGGCTTTGAAGAGGAAGAGGCCGATGATGATTGATATTCCAGTAGCGCCGTTGAGTTTCAAGGTTGAGTCGCCTGATGGAGCGGAGAGGGTGGACGTGGTGGAGGTTGAAGAGGATGGTTACTCGGTATATTGTAAGAGAGGGAGAAGGGGTCCCATGGAGGATCGCTACTCAGCTGTTGTTGATCTTCGCGATGATTCGAGACAGGCCTTCTTTGGTGTGTTTGATGGACATGGAGGGGCAAAAGCAGCCGAATTTGCAGCTAAGAACATGGATAGAAACATTAAGGATCGTTTGACCTGCGGAAGTGAAGAGAAAATCATGGAAGCAGTCAAAGATGGTTATCTAACCACTGATGTCGATTTTTTGAAGGAGAATGTTGGGAGTGGTGCATGCTGTGTGACTGCCTTAATGCAAAAGGGCAACCTTGTGGTCTCAAATGCTGGTGACTGTCGTGCCGTTATGAGCCGAGGAGGTGTTGCAGAGGCCCTTACATCTGATCATCATCCTTCTAGAGTAGACGAAAGAGCTAGGATTGAAACCACGGGTGGTTATGTAGATTGTTGCCGTGGGGTTTGGAGAATACAGGGCTCTCTTGCTGTTTCAAGAGCAATTGGAGATCGACAACTTAAGCAATGGGTGATAGCAGAACCGGAGACTACAATCTTAAGGATAGACCCTGAATGCGAGTTTTTAGTGTTAGCTTCTGATGGTCTTTGGGACAAGGTTACCAATCAGGAGGCAGTAGATGTAGTTCGCCCTTTATGCGTTGGTACCGATAAGCCAGAGATGTTTTCTGCTTGTAAGAAGCTTGTTGATCTGTCAATAGGGAGAGGTTCCATGGATGATACAAGTGTGATGATAATCCAATTAGGTCGTTTCATCTCATGA

Protein Analysis

372

Amino Acids

40.31

Weight (kDa)

6.27

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 533
Acc65I GGTACC 1 cut(s) 998
AccB1I GGYRCC 2 cut(s) 19, 998
AccBSI CCGCTC 1 cut(s) 308
AccI GTMKAC 1 cut(s) 744
AccII CGCG 1 cut(s) 417
AciI CCGC 3 cut(s) 128, 308, 528
AclWI GGATC 2 cut(s) 396, 522
AcsI RAATTY 2 cut(s) 51, 479
AcvI CACGTG 1 cut(s) 193
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 1 cut(s) 1000
AflII CTTAAG 2 cut(s) 854, 892
AgsI TTSAA 6 cut(s) 235, 286, 335, 595, 764, 831
AjiI CACGTC 1 cut(s) 322
AluBI AGCT 5 cut(s) 401, 488, 755, 929, 1036
AluI AGCT 5 cut(s) 401, 488, 755, 929, 1036
Alw26I GTCTC 4 cut(s) 180, 421, 664, 875
AlwI GGATC 2 cut(s) 396, 522
AoxI GGCC 4 cut(s) 124, 245, 432, 711
ApeKI GCWGC 3 cut(s) 204, 473, 485
ApoI RAATTY 2 cut(s) 51, 479
ArsI GACNNNNNNTTYG 2 cut(s) 202, 234
Asp718I GGTACC 1 cut(s) 998
AspLEI GCGC 4 cut(s) 11, 22, 166, 274
AspS9I GGNCC 3 cut(s) 125, 377, 712
AsuHPI GGTGA 3 cut(s) 33, 683, 877
AvaII GGWCC 1 cut(s) 377
BaeI ACNNNNGTAYC 2 cut(s) 1065, 1098
BanI GGYRCC 2 cut(s) 19, 998
BanII GRGCYC 1 cut(s) 818
BbrPI CACGTG 1 cut(s) 193
BbsI GAAGAC 1 cut(s) 147
BbvI GCAGC 3 cut(s) 191, 485, 497
BccI CCATC 6 cut(s) 68, 296, 335, 446, 557, 929
BceAI ACGGC 4 cut(s) 124, 259, 668, 777
BclI TGATCA 1 cut(s) 724
BcoDI GTCTC 4 cut(s) 180, 421, 664, 875
BfaI CTAG 3 cut(s) 111, 738, 756
BfoI RGCGCY 3 cut(s) 23, 167, 275
BfrI CTTAAG 2 cut(s) 854, 892
BfuAI ACCTGC 1 cut(s) 533
BisI GCNGC 3 cut(s) 205, 474, 486
BlsI GCNGC 3 cut(s) 206, 475, 487
Bme18I GGWCC 1 cut(s) 377
BmgBI CACGTC 1 cut(s) 322
BmgT120I GGNCC 3 cut(s) 125, 377, 712
BmiI GGNNCC 6 cut(s) 21, 216, 378, 379, 1000, 1063
BpiI GAAGAC 1 cut(s) 147
BsaAI YACGTR 1 cut(s) 193
BsaBI GATNNNNATC 4 cut(s) 76, 567, 729, 1088
BsaHI GRCGYC 1 cut(s) 20
BsaI GGTCTC 1 cut(s) 664
BsaJI CCNNGG 6 cut(s) 121, 381, 694, 768, 793, 1065
BsaWI WCCGGW 1 cut(s) 877
BsaXI ACNNNNNCTCC 2 cut(s) 361, 391
Bse1I ACTGG 1 cut(s) 266
Bse3DI GCAATG 1 cut(s) 866
Bse8I GATNNNNATC 4 cut(s) 76, 567, 729, 1088
BseDI CCNNGG 6 cut(s) 121, 381, 694, 768, 793, 1065
BseGI GGATG 3 cut(s) 346, 730, 1075
BseJI GATNNNNATC 4 cut(s) 76, 567, 729, 1088
BseMI GCAATG 1 cut(s) 866
BseMII CTCAG 1 cut(s) 411
BseNI ACTGG 1 cut(s) 266
BseRI GAGGAG 1 cut(s) 711
BseXI GCAGC 3 cut(s) 191, 485, 497
Bsh1236I CGCG 1 cut(s) 417
BshFI GGCC 4 cut(s) 126, 247, 434, 713
BshNI GGYRCC 2 cut(s) 19, 998
BsiSI CCGG 1 cut(s) 878
BslFI GGGAC 2 cut(s) 363, 959
BsmAI GTCTC 4 cut(s) 180, 421, 664, 875
BsmFI GGGAC 2 cut(s) 363, 959
BsmI GAATGC 1 cut(s) 914
BsnI GGCC 4 cut(s) 126, 247, 434, 713
Bso31I GGTCTC 1 cut(s) 664
Bsp1286I GDGCHC 1 cut(s) 818
Bsp143I GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
Bsp19I CCATGG 3 cut(s) 121, 381, 1065
Bsp68I TCGCGA 1 cut(s) 417
BspACI CCGC 3 cut(s) 128, 308, 528
BspANI GGCC 4 cut(s) 126, 247, 434, 713
BspCNI CTCAG 1 cut(s) 410
BspFNI CGCG 1 cut(s) 417
BspHI TCATGA 1 cut(s) 1112
BspLI GGNNCC 6 cut(s) 21, 216, 378, 379, 1000, 1063
BspMI ACCTGC 1 cut(s) 533
BspPI GGATC 2 cut(s) 396, 522
BspT107I GGYRCC 2 cut(s) 19, 998
BspTI CTTAAG 2 cut(s) 854, 892
BspTNI GGTCTC 1 cut(s) 664
BsrBI CCGCTC 1 cut(s) 308
BsrDI GCAATG 1 cut(s) 866
BsrI ACTGG 1 cut(s) 266
BssECI CCNNGG 6 cut(s) 121, 381, 694, 768, 793, 1065
BssMI GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
BssNI GRCGYC 1 cut(s) 20
BssT1I CCWWGG 3 cut(s) 121, 381, 1065
Bst4CI ACNGT 2 cut(s) 45, 677
Bst6I CTCTTC 4 cut(s) 230, 236, 330, 531
BstACI GRCGYC 1 cut(s) 20
BstAFI CTTAAG 2 cut(s) 854, 892
BstBAI YACGTR 1 cut(s) 193
BstC8I GCNNGC 2 cut(s) 128, 619
BstDEI CTNAG 2 cut(s) 397, 489
BstDSI CCRYGG 5 cut(s) 121, 381, 768, 793, 1065
BstEII GGTNACC 1 cut(s) 952
BstF5I GGATG 3 cut(s) 346, 730, 1075
BstFNI CGCG 1 cut(s) 417
BstH2I RGCGCY 3 cut(s) 23, 167, 275
BstHHI GCGC 4 cut(s) 11, 22, 166, 274
BstKTI GATC 8 cut(s) 74, 149, 391, 412, 517, 727, 847, 1045
BstMAI GTCTC 4 cut(s) 180, 421, 664, 875
BstMBI GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
BstMWI GCNNNNNNNGC 5 cut(s) 17, 136, 473, 482, 990
BstNSI RCATGY 1 cut(s) 621
BstPI GGTNACC 1 cut(s) 952
BstUI CGCG 1 cut(s) 417
BstV1I GCAGC 3 cut(s) 191, 485, 497
BstV2I GAAGAC 1 cut(s) 147
BsuRI GGCC 4 cut(s) 126, 247, 434, 713
BtgI CCRYGG 5 cut(s) 121, 381, 768, 793, 1065
BtgZI GCGATG 1 cut(s) 432
BtrI CACGTC 1 cut(s) 322
BtsCI GGATG 3 cut(s) 346, 730, 1075
BtsIMutI CAGTG 1 cut(s) 576
BtuMI TCGCGA 1 cut(s) 417
BveI ACCTGC 1 cut(s) 533
Cac8I GCNNGC 2 cut(s) 128, 619
CciI TCATGA 1 cut(s) 1112
CfoI GCGC 4 cut(s) 11, 22, 166, 274
Cfr13I GGNCC 3 cut(s) 125, 377, 712
Csp6I GTAC 1 cut(s) 999
CviAII CATG 9 cut(s) 99, 122, 382, 458, 496, 547, 618, 1066, 1113
CviQI GTAC 1 cut(s) 999
DdeI CTNAG 2 cut(s) 397, 489
DinI GGCGCC 1 cut(s) 21
DpnI GATC 8 cut(s) 73, 148, 390, 411, 516, 726, 846, 1044
DpnII GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
Eam1104I CTCTTC 4 cut(s) 230, 236, 330, 531
EarI CTCTTC 4 cut(s) 230, 236, 330, 531
Eco130I CCWWGG 3 cut(s) 121, 381, 1065
Eco147I AGGCCT 1 cut(s) 434
Eco24I GRGCYC 1 cut(s) 818
Eco31I GGTCTC 1 cut(s) 664
Eco47I GGWCC 1 cut(s) 377
Eco72I CACGTG 1 cut(s) 193
Eco91I GGTNACC 1 cut(s) 952
EcoO109I RGGNCCY 2 cut(s) 377, 712
EcoO65I GGTNACC 1 cut(s) 952
EcoT14I CCWWGG 3 cut(s) 121, 381, 1065
EcoT38I GRGCYC 1 cut(s) 818
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
ErhI CCWWGG 3 cut(s) 121, 381, 1065
FaeI CATG 9 cut(s) 102, 125, 385, 461, 499, 550, 621, 1069, 1116
FaqI GGGAC 2 cut(s) 363, 959
FatI CATG 9 cut(s) 98, 121, 381, 457, 495, 546, 617, 1065, 1112
FauI CCCGC 1 cut(s) 135
FbaI TGATCA 1 cut(s) 724
FblI GTMKAC 1 cut(s) 744
Fnu4HI GCNGC 3 cut(s) 205, 474, 486
FokI GGATG 3 cut(s) 353, 717, 1082
FriOI GRGCYC 1 cut(s) 818
Fsp4HI GCNGC 3 cut(s) 205, 474, 486
FspBI CTAG 3 cut(s) 111, 738, 756
GlaI GCGC 4 cut(s) 10, 21, 165, 273
GluI GCNGC 3 cut(s) 205, 474, 486
HaeII RGCGCY 3 cut(s) 23, 167, 275
HaeIII GGCC 4 cut(s) 126, 247, 434, 713
HapII CCGG 1 cut(s) 878
HhaI GCGC 4 cut(s) 11, 22, 166, 274
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 9 cut(s) 102, 125, 385, 461, 499, 550, 621, 1069, 1116
Hin6I GCGC 4 cut(s) 9, 20, 164, 272
HinP1I GCGC 4 cut(s) 9, 20, 164, 272
HindIII AAGCTT 1 cut(s) 1034
HinfI GANTC 4 cut(s) 114, 173, 293, 422
HpaII CCGG 1 cut(s) 878
HphI GGTGA 3 cut(s) 33, 683, 877
Hpy166II GTNNAC 2 cut(s) 319, 745
Hpy188I TCNGA 5 cut(s) 33, 71, 186, 724, 934
Hpy188III TCNNGA 7 cut(s) 144, 416, 426, 738, 831, 962, 1113
Hpy8I GTNNAC 2 cut(s) 319, 745
Hpy99I CGWCG 1 cut(s) 49
HpyAV CCTTC 7 cut(s) 66, 102, 228, 366, 445, 589, 744
HpyCH4III ACNGT 2 cut(s) 45, 677
HpyCH4IV ACGT 2 cut(s) 192, 321
HpyCH4V TGCA 5 cut(s) 207, 485, 617, 640, 707
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 136, 473, 482, 990
HpyF3I CTNAG 2 cut(s) 397, 489
HpySE526I ACGT 2 cut(s) 192, 321
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 9 cut(s) 102, 125, 385, 461, 499, 550, 621, 1069, 1116
HspAI GCGC 4 cut(s) 9, 20, 164, 272
KasI GGCGCC 1 cut(s) 19
KflI GGGWCCC 1 cut(s) 377
KpnI GGTACC 1 cut(s) 1002
Ksp22I TGATCA 1 cut(s) 724
Kzo9I GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
LmnI GCTCC 2 cut(s) 214, 305
Lsp1109I GCAGC 3 cut(s) 191, 485, 497
MaeI CTAG 3 cut(s) 111, 738, 756
MaeII ACGT 2 cut(s) 192, 321
MaeIII GTNAC 5 cut(s) 141, 344, 625, 671, 952
MalI GATC 8 cut(s) 73, 148, 390, 411, 516, 726, 846, 1044
MbiI CCGCTC 1 cut(s) 308
MboI GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
MfeI CAATTG 1 cut(s) 837
MhlI GDGCHC 1 cut(s) 818
MluCI AATT 4 cut(s) 51, 479, 837, 1094
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 3 cut(s) 123, 182, 302
MseI TTAA 4 cut(s) 510, 635, 855, 893
MspA1I CMGCKG 1 cut(s) 401
MspCI CTTAAG 2 cut(s) 854, 892
MspI CCGG 1 cut(s) 878
MunI CAATTG 1 cut(s) 837
Mva1269I GAATGC 1 cut(s) 914
MvnI CGCG 1 cut(s) 417
MwoI GCNNNNNNNGC 5 cut(s) 17, 136, 473, 482, 990
NarI GGCGCC 1 cut(s) 20
NcoI CCATGG 3 cut(s) 121, 381, 1065
NdeII GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
NlaIII CATG 9 cut(s) 102, 125, 385, 461, 499, 550, 621, 1069, 1116
NlaIV GGNNCC 6 cut(s) 21, 216, 378, 379, 1000, 1063
NmeAIII GCCGAG 1 cut(s) 719
NmuCI GTSAC 3 cut(s) 141, 625, 671
NruI TCGCGA 1 cut(s) 417
NspI RCATGY 1 cut(s) 621
PaeI GCATGC 1 cut(s) 621
PagI TCATGA 1 cut(s) 1112
PceI AGGCCT 1 cut(s) 434
PctI GAATGC 1 cut(s) 914
PfeI GAWTC 1 cut(s) 422
PkrI GCNGC 3 cut(s) 206, 475, 487
PleI GAGTC 3 cut(s) 122, 181, 301
PluTI GGCGCC 1 cut(s) 23
PmaCI CACGTG 1 cut(s) 193
PmlI CACGTG 1 cut(s) 193
PpsI GAGTC 3 cut(s) 122, 181, 301
Ppu21I YACGTR 1 cut(s) 193
PpuMI RGGWCCY 1 cut(s) 377
Psp5II RGGWCCY 1 cut(s) 377
PspCI CACGTG 1 cut(s) 193
PspEI GGTNACC 1 cut(s) 952
PspN4I GGNNCC 6 cut(s) 21, 216, 378, 379, 1000, 1063
PspPI GGNCC 3 cut(s) 125, 377, 712
PspPPI RGGWCCY 1 cut(s) 377
PsrI GAACNNNNNNTAC 2 cut(s) 963, 995
PvuII CAGCTG 1 cut(s) 401
RruI TCGCGA 1 cut(s) 417
RsaI GTAC 1 cut(s) 1000
RsaNI GTAC 1 cut(s) 999
SaqAI TTAA 4 cut(s) 510, 635, 855, 893
SatI GCNGC 3 cut(s) 205, 474, 486
Sau3AI GATC 8 cut(s) 71, 146, 388, 409, 514, 724, 844, 1042
Sau96I GGNCC 3 cut(s) 125, 377, 712
SchI GAGTC 3 cut(s) 123, 182, 302
SduI GDGCHC 1 cut(s) 818
SfoI GGCGCC 1 cut(s) 21
SinI GGWCC 1 cut(s) 377
SmlI CTYRAG 2 cut(s) 854, 892
SmoI CTYRAG 2 cut(s) 854, 892
SphI GCATGC 1 cut(s) 621
Sse9I AATT 4 cut(s) 51, 479, 837, 1094
SseBI AGGCCT 1 cut(s) 434
SsiI CCGC 3 cut(s) 128, 308, 528
SspDI GGCGCC 1 cut(s) 19
SspMI CTAG 3 cut(s) 111, 738, 756
StuI AGGCCT 1 cut(s) 434
StyI CCWWGG 3 cut(s) 121, 381, 1065
TaaI ACNGT 2 cut(s) 45, 677
TaiI ACGT 2 cut(s) 195, 324
TaqI TCGA 5 cut(s) 47, 158, 425, 585, 847
TasI AATT 4 cut(s) 51, 479, 837, 1094
TfiI GAWTC 1 cut(s) 422
Tru1I TTAA 4 cut(s) 510, 635, 855, 893
Tru9I TTAA 4 cut(s) 510, 635, 855, 893
TscAI CASTG 1 cut(s) 583
TseFI GTSAC 3 cut(s) 141, 625, 671
TseI GCWGC 3 cut(s) 204, 473, 485
Tsp45I GTSAC 3 cut(s) 141, 625, 671
TspDTI ATGAA 2 cut(s) 87, 1096
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 1 cut(s) 583
Vha464I CTTAAG 2 cut(s) 854, 892
VpaK11BI GGWCC 1 cut(s) 377
XapI RAATTY 2 cut(s) 51, 479
XbaI TCTAGA 1 cut(s) 737
XceI RCATGY 1 cut(s) 621
XmiI GTMKAC 1 cut(s) 744
XspI CTAG 3 cut(s) 111, 738, 756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.