Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005992

Physical Location & Seq

Genomic Coordinates Reverse (-)

7101269 .. 7103928

Gene Structure 2660 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G16400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGGCCACTTATTACAAAACTGGCTCAAGTGAGATTTATTCCAGACCAGAATTTGTCCCTGGAAACGCAATGAACTACACAAATTCTTTCACAGAGACATTTCCTAGAGATTCAACTAATAATGTGTCACCTTCAAAAGAGATTCAAGTGTTGTCAAGCCTTGGTGGAGTTTCACAAATGGTTGAGATTCAAGATTCTGGTTCTTGGAGAGATCAAGAAGACAATGACAGGAATCGCTTCCCGGTGATGAGGCGTCTTGGCCTCAGCTCGCAGATTGAGACATCGAGAGGCAATAATAACAATGAGTATGCAACACAGGTTGTTTCGGGATTTACTCGAACCATTCACAACTCAAAGTATCTCAAAGCTGCTCAAGAGCTTCTTGATGAAACTGTTAATGTTAAGAAAGCTCTAAAGCAGTTTCAGCCAGAGGGAGATAAGATTAATGAAGTGAAAGAGAAGAATCTTCAGACGAATACTGCTGAAATCCCTCAAGCAGAGAGGCAAGAATTGCAGAGCAAGTTGTCGAAACTTTTATCGATATTAGACGAGGTGGATAGAAATTACAAGCAGTATTACCATCAGATGCAGATAGTCGTGTCGTCTTTCGATGTAATAGCCGGATGTGGAGCAGCCAAACCATACACAGCCCTTGCGCTTCAGACCATCTCGAGGCATTTCCGTTGCTTAAGGGATGCGATATCCGGACAAATCTTGGTGATAAGGAAAAGTTTAGGAGGGGAACAGGATGGATCAGATGGGAGAGGAGTGGGGATAAGCAGGTTAAGGAATGTTGATCAACAGGTAAGGCAACAAAGAGCGTTGCAGCGGTTAGGTGTGATGCAACCTCACACTTGGCGGCCTCAACGCGGTTTACCAGATTCTTCTGTTTTGGTTCTCCGTGCTTGGCTATTTGAGCATTTCCTCCACCCTTATCCAAAGGATTCAGACAAGATCATGCTCGCTAGACAAACGGGGTTGAGCCGAGGCCAGGTATCGAACTGGTTCATAAATGCGCGTGTGCGTCTCTGGAAACCGATGGTGGAGGAGATGTACAAGGAGGAATTCACAGATGCATTGCAGGAGAATGATCCCAACCAGTCTTCTGAAAACACACCAGAAATCACCGAGATTCAAGAGCTGCAAACTGAGTCTAGTTCCAACAATGGGCATGTACCTGGTGTGGCAAGCAGTAGCATGAGACAAAACACAGTGGCCCATGGTGGTGACCGGTTCATGATGGTGACTGACATGACAAGAAATGGTAATGGTGGGATGTCTTTAACGTTGGGGATTCAGAATTCCGATGCTCGTGGCGATGTTCCTATGTCCGGTGGGATAGATAACTACAAGAATACCATCTCGGGAACCGATCTACAGTACTTAAACTCTCGCAACCACCAGCACCAGATTGGCTCTTCACAATTGTTGCATGATTTTGTAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009639 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009987 GO:0010033 GO:0010197 GO:0010201 GO:0010218 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0046982 GO:0046983 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

482

Amino Acids

54.24

Weight (kDa)

6.62

Isoelectric Point (pI)

46.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	115 - 235	4.9e-46	Associated with HOX
Homeobox_KN	PF05920	303 - 342	1.2e-18	Homeobox KN domain
Homeodomain	PF00046	310 - 342	4.8e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16400
fragaria_vesca	FvH4_2g09770 FvH4_2g09770 FvH4_2g09770
malus_domestica	MD05G1059800.v1.1 MD10G1068000.v1.1
prunus_persica	Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1
pyrus_communis	pycom05g05110 pycom05g05120 pycom10g05380
rosa_chinensis	RchiOBHm_Chr6g0266091 RchiOBHm_Chr6g0266111
rosa_laevigata	RLG00000014115
rosa_multiflora	Rmu_co8443717.1_g000001 Rmu_sc0004324.1_g000004
rosa_roxburghii	Rroxscaffold_174G00435200 Rroxscaffold_7G00201970
rosa_rugosa	Rorug06G0023900 Rorug06G0024000 Rorug06G0024100
rosa_samantha	Rh6AG144700 Rh6BG145100 Rh6CG141800 Rh6DG129400
rosa_wichuraiana	Rw6G012490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	771
AccII	CGCG	2 cut(s)	870, 1018
AccIII	TCCGGA	1 cut(s)	704
AciI	CCGC	3 cut(s)	829, 859, 870
AclI	AACGTT	1 cut(s)	1286
AclWI	GGATC	2 cut(s)	760, 1085
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	50, 82, 1064, 1300
AcuI	CTGAAG	2 cut(s)	452, 644
AcyI	GRCGYC	1 cut(s)	253
AfaI	GTAC	3 cut(s)	1055, 1176, 1382
AfiI	CCNNNNNNNGG	5 cut(s)	672, 869, 991, 1167, 1331
AflII	CTTAAG	1 cut(s)	688
AgeI	ACCGGT	1 cut(s)	1230
AgsI	TTSAA	5 cut(s)	114, 135, 146, 191, 1136
AjnI	CCWGG	3 cut(s)	58, 990, 1177
AluBI	AGCT	6 cut(s)	267, 368, 379, 410, 1141, 1445
AluI	AGCT	6 cut(s)	267, 368, 379, 410, 1141, 1445
Alw26I	GTCTC	4 cut(s)	89, 272, 1031, 1195
AlwI	GGATC	2 cut(s)	760, 1085
Ama87I	CYCGRG	2 cut(s)	670, 1363
Aor13HI	TCCGGA	1 cut(s)	704
AoxI	GGCC	5 cut(s)	3, 259, 860, 988, 1215
ApeKI	GCWGC	4 cut(s)	368, 632, 826, 1141
ApoI	RAATTY	4 cut(s)	50, 82, 1064, 1300
AseI	ATTAAT	1 cut(s)	444
AsiGI	ACCGGT	1 cut(s)	1230
Asp700I	GAANNNNTTC	2 cut(s)	236, 1004
AspLEI	GCGC	2 cut(s)	658, 1018
AspS9I	GGNCC	1 cut(s)	1216
AsuC2I	CCSGG	1 cut(s)	242
AsuHPI	GGTGA	6 cut(s)	120, 256, 730, 1117, 1238, 1255
AvaI	CYCGRG	2 cut(s)	670, 1363
BalI	TGGCCA	1 cut(s)	5
BauI	CACGAG	1 cut(s)	1311
BbsI	GAAGAC	2 cut(s)	225, 1095
BbvCI	CCTCAGC	1 cut(s)	263
BbvI	GCAGC	4 cut(s)	355, 644, 838, 1128
BccI	CCATC	7 cut(s)	588, 674, 743, 752, 1033, 1234, 1367
BciT130I	CCWGG	3 cut(s)	60, 992, 1179
BclI	TGATCA	1 cut(s)	796
BcnI	CCSGG	1 cut(s)	242
BcoDI	GTCTC	4 cut(s)	89, 272, 1031, 1195
BfaI	CTAG	3 cut(s)	105, 966, 1155
BfmI	CTRYAG	1 cut(s)	1376
BfrI	CTTAAG	1 cut(s)	688
BfuAI	ACCTGC	1 cut(s)	771
BisI	GCNGC	5 cut(s)	369, 633, 827, 860, 1142
BlsI	GCNGC	5 cut(s)	370, 634, 828, 861, 1143
BmcAI	AGTACT	1 cut(s)	1382
Bme1390I	CCNGG	4 cut(s)	60, 242, 992, 1179
BmeT110I	CYCGRG	2 cut(s)	670, 1363
BmgT120I	GGNCC	1 cut(s)	1216
BmiI	GGNNCC	1 cut(s)	1369
BmrFI	CCNGG	4 cut(s)	60, 242, 992, 1179
BmsI	GCATC	5 cut(s)	576, 685, 831, 1063, 1297
BpiI	GAAGAC	2 cut(s)	225, 1095
Bpu10I	CCTNAGC	1 cut(s)	263
BpuEI	CTTGAG	3 cut(s)	10, 357, 477
BpuMI	CCSGG	1 cut(s)	242
Bsa29I	ATCGAT	1 cut(s)	539
BsaHI	GRCGYC	1 cut(s)	253
BsaJI	CCNNGG	4 cut(s)	58, 160, 985, 1219
BsaWI	WCCGGW	3 cut(s)	704, 1230, 1331
BsaXI	ACNNNNNCTCC	2 cut(s)	1037, 1067
Bsc4I	CCNNNNNNNGG	5 cut(s)	672, 869, 991, 1167, 1331
Bse118I	RCCGGY	1 cut(s)	1230
Bse1I	ACTGG	3 cut(s)	25, 1007, 1099
Bse3DI	GCAATG	2 cut(s)	75, 1076
BseAI	TCCGGA	1 cut(s)	704
BseBI	CCWGG	3 cut(s)	60, 992, 1179
BseCI	ATCGAT	1 cut(s)	539
BseDI	CCNNGG	4 cut(s)	58, 160, 985, 1219
BseGI	GGATG	4 cut(s)	629, 700, 754, 1281
BseLI	CCNNNNNNNGG	5 cut(s)	672, 869, 991, 1167, 1331
BseMI	GCAATG	2 cut(s)	75, 1076
BseMII	CTCAG	2 cut(s)	277, 1140
BseNI	ACTGG	3 cut(s)	25, 1007, 1099
BseRI	GAGGAG	2 cut(s)	780, 1061
BseXI	GCAGC	4 cut(s)	355, 644, 838, 1128
Bsh1236I	CGCG	2 cut(s)	870, 1018
BshFI	GGCC	5 cut(s)	5, 261, 862, 990, 1217
BshTI	ACCGGT	1 cut(s)	1230
BshVI	ATCGAT	1 cut(s)	539
BsiHKCI	CYCGRG	2 cut(s)	670, 1363
BsiSI	CCGG	5 cut(s)	242, 621, 705, 1231, 1332
BslFI	GGGAC	1 cut(s)	41
BslI	CCNNNNNNNGG	5 cut(s)	672, 869, 991, 1167, 1331
BsmAI	GTCTC	4 cut(s)	89, 272, 1031, 1195
BsmBI	CGTCTC	1 cut(s)	1031
BsmFI	GGGAC	1 cut(s)	41
BsnI	GGCC	5 cut(s)	5, 261, 862, 990, 1217
BsoBI	CYCGRG	2 cut(s)	670, 1363
Bsp13I	TCCGGA	1 cut(s)	704
Bsp1407I	TGTACA	1 cut(s)	1053
Bsp143I	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
Bsp19I	CCATGG	1 cut(s)	1219
BspACI	CCGC	3 cut(s)	829, 859, 870
BspANI	GGCC	5 cut(s)	5, 261, 862, 990, 1217
BspCNI	CTCAG	2 cut(s)	276, 1141
BspDI	ATCGAT	1 cut(s)	539
BspEI	TCCGGA	1 cut(s)	704
BspFNI	CGCG	2 cut(s)	870, 1018
BspHI	TCATGA	1 cut(s)	1236
BspLI	GGNNCC	1 cut(s)	1369
BspMI	ACCTGC	1 cut(s)	771
BspPI	GGATC	2 cut(s)	760, 1085
BspQI	GCTCTTC	1 cut(s)	1423
BspTI	CTTAAG	1 cut(s)	688
BsrDI	GCAATG	2 cut(s)	75, 1076
BsrFI	RCCGGY	1 cut(s)	1230
BsrGI	TGTACA	1 cut(s)	1053
BsrI	ACTGG	3 cut(s)	25, 1007, 1099
BssAI	RCCGGY	1 cut(s)	1230
BssECI	CCNNGG	4 cut(s)	58, 160, 985, 1219
BssMI	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
BssNI	GRCGYC	1 cut(s)	253
BssSI	CACGAG	1 cut(s)	1311
BssT1I	CCWWGG	2 cut(s)	160, 1219
Bst2BI	CACGAG	1 cut(s)	1311
Bst2UI	CCWGG	3 cut(s)	60, 992, 1179
Bst4CI	ACNGT	3 cut(s)	394, 1213, 1380
Bst6I	CTCTTC	1 cut(s)	1423
BstACI	GRCGYC	1 cut(s)	253
BstAFI	CTTAAG	1 cut(s)	688
BstAPI	GCANNNNNTGC	1 cut(s)	511
BstAUI	TGTACA	1 cut(s)	1053
BstC8I	GCNNGC	3 cut(s)	269, 963, 1189
BstDEI	CTNAG	2 cut(s)	263, 1149
BstDSI	CCRYGG	1 cut(s)	1219
BstEII	GGTNACC	1 cut(s)	1226
BstF5I	GGATG	4 cut(s)	629, 700, 754, 1281
BstFNI	CGCG	2 cut(s)	870, 1018
BstHHI	GCGC	2 cut(s)	658, 1018
BstKTI	GATC	6 cut(s)	214, 755, 799, 957, 1093, 1375
BstMAI	GTCTC	4 cut(s)	89, 272, 1031, 1195
BstMBI	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
BstMWI	GCNNNNNNNGC	3 cut(s)	424, 511, 916
BstNI	CCWGG	3 cut(s)	60, 992, 1179
BstNSI	RCATGY	1 cut(s)	1175
BstPI	GGTNACC	1 cut(s)	1226
BstSCI	CCNGG	4 cut(s)	58, 240, 990, 1177
BstSFI	CTRYAG	1 cut(s)	1376
BstUI	CGCG	2 cut(s)	870, 1018
BstV1I	GCAGC	4 cut(s)	355, 644, 838, 1128
BstV2I	GAAGAC	2 cut(s)	225, 1095
Bsu15I	ATCGAT	1 cut(s)	539
BsuRI	GGCC	5 cut(s)	5, 261, 862, 990, 1217
BsuTUI	ATCGAT	1 cut(s)	539
BtgI	CCRYGG	1 cut(s)	1219
BtgZI	GCGATG	1 cut(s)	1332
BtsCI	GGATG	4 cut(s)	629, 700, 754, 1281
BtsIMutI	CAGTG	1 cut(s)	1218
BveI	ACCTGC	1 cut(s)	771
Cac8I	GCNNGC	3 cut(s)	269, 963, 1189
CciI	TCATGA	1 cut(s)	1236
CfoI	GCGC	2 cut(s)	658, 1018
Cfr10I	RCCGGY	1 cut(s)	1230
Cfr13I	GGNCC	1 cut(s)	1216
ClaI	ATCGAT	1 cut(s)	539
CseI	GACGC	2 cut(s)	242, 1013
CsiI	ACCWGGT	1 cut(s)	1177
Csp6I	GTAC	3 cut(s)	1054, 1175, 1381
CspAI	ACCGGT	1 cut(s)	1230
CviAII	CATG	7 cut(s)	958, 1172, 1198, 1220, 1237, 1252, 1433
CviQI	GTAC	3 cut(s)	1054, 1175, 1381
DdeI	CTNAG	2 cut(s)	263, 1149
DpnI	GATC	6 cut(s)	213, 754, 798, 956, 1092, 1374
DpnII	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1423
EarI	CTCTTC	1 cut(s)	1423
Eco130I	CCWWGG	2 cut(s)	160, 1219
Eco32I	GATATC	1 cut(s)	702
Eco57I	CTGAAG	2 cut(s)	452, 644
Eco88I	CYCGRG	2 cut(s)	670, 1363
Eco91I	GGTNACC	1 cut(s)	1226
EcoO65I	GGTNACC	1 cut(s)	1226
EcoRI	GAATTC	2 cut(s)	1064, 1300
EcoRII	CCWGG	3 cut(s)	58, 990, 1177
EcoRV	GATATC	1 cut(s)	702
EcoT14I	CCWWGG	2 cut(s)	160, 1219
EcoT22I	ATGCAT	1 cut(s)	1078
ErhI	CCWWGG	2 cut(s)	160, 1219
Esp3I	CGTCTC	1 cut(s)	1031
FaeI	CATG	7 cut(s)	961, 1175, 1201, 1223, 1240, 1255, 1436
FalI	AAGNNNNNCTT	2 cut(s)	366, 398
FaqI	GGGAC	1 cut(s)	41
FatI	CATG	7 cut(s)	957, 1171, 1197, 1219, 1236, 1251, 1432
FbaI	TGATCA	1 cut(s)	796
Fnu4HI	GCNGC	5 cut(s)	369, 633, 827, 860, 1142
FokI	GGATG	4 cut(s)	636, 707, 761, 1288
Fsp4HI	GCNGC	5 cut(s)	369, 633, 827, 860, 1142
FspBI	CTAG	3 cut(s)	105, 966, 1155
GlaI	GCGC	2 cut(s)	657, 1017
GluI	GCNGC	5 cut(s)	369, 633, 827, 860, 1142
HaeIII	GGCC	5 cut(s)	5, 261, 862, 990, 1217
HapII	CCGG	5 cut(s)	242, 621, 705, 1231, 1332
HgaI	GACGC	2 cut(s)	242, 1013
HhaI	GCGC	2 cut(s)	658, 1018
Hin1I	GRCGYC	1 cut(s)	253
Hin1II	CATG	7 cut(s)	961, 1175, 1201, 1223, 1240, 1255, 1436
Hin6I	GCGC	2 cut(s)	656, 1016
HinP1I	GCGC	2 cut(s)	656, 1016
HpaII	CCGG	5 cut(s)	242, 621, 705, 1231, 1332
HphI	GGTGA	6 cut(s)	120, 256, 730, 1117, 1238, 1255
Hpy166II	GTNNAC	1 cut(s)	875
Hpy188I	TCNGA	8 cut(s)	471, 585, 663, 757, 949, 1108, 1299, 1306
Hpy8I	GTNNAC	1 cut(s)	875
HpyAV	CCTTC	1 cut(s)	141
HpyCH4III	ACNGT	3 cut(s)	394, 1213, 1380
HpyCH4IV	ACGT	1 cut(s)	1286
HpyCH4V	TGCA	9 cut(s)	311, 514, 589, 826, 844, 1076, 1081, 1144, 1432
HpyF10VI	GCNNNNNNNGC	3 cut(s)	424, 511, 916
HpyF3I	CTNAG	2 cut(s)	263, 1149
HpySE526I	ACGT	1 cut(s)	1286
Hsp92I	GRCGYC	1 cut(s)	253
Hsp92II	CATG	7 cut(s)	961, 1175, 1201, 1223, 1240, 1255, 1436
HspAI	GCGC	2 cut(s)	656, 1016
Kpn2I	TCCGGA	1 cut(s)	704
Ksp22I	TGATCA	1 cut(s)	796
Kzo9I	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
LguI	GCTCTTC	1 cut(s)	1423
LmnI	GCTCC	1 cut(s)	629
Lsp1109I	GCAGC	4 cut(s)	355, 644, 838, 1128
LweI	GCATC	5 cut(s)	576, 685, 831, 1063, 1297
MabI	ACCWGGT	1 cut(s)	1177
MaeI	CTAG	3 cut(s)	105, 966, 1155
MaeII	ACGT	1 cut(s)	1286
MaeIII	GTNAC	3 cut(s)	126, 1226, 1243
MalI	GATC	6 cut(s)	213, 754, 798, 956, 1092, 1374
MboI	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
MboII	GAAGA	6 cut(s)	230, 458, 472, 876, 1095, 1410
MfeI	CAATTG	1 cut(s)	1424
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	7 cut(s)	50, 82, 509, 562, 1064, 1300, 1424
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	1160
MmeI	TCCRAC	1 cut(s)	1185
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1078
MroI	TCCGGA	1 cut(s)	704
MroXI	GAANNNNTTC	2 cut(s)	236, 1004
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	396, 402, 444, 689, 785, 1283, 1385
MslI	CAYNNNNRTG	2 cut(s)	1224, 1241
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	829
MspCI	CTTAAG	1 cut(s)	688
MspI	CCGG	5 cut(s)	242, 621, 705, 1231, 1332
MspR9I	CCNGG	4 cut(s)	60, 242, 992, 1179
MunI	CAATTG	1 cut(s)	1424
MvaI	CCWGG	3 cut(s)	60, 992, 1179
MvnI	CGCG	2 cut(s)	870, 1018
MwoI	GCNNNNNNNGC	3 cut(s)	424, 511, 916
NciI	CCSGG	1 cut(s)	242
NcoI	CCATGG	1 cut(s)	1219
NdeII	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
NlaIII	CATG	7 cut(s)	961, 1175, 1201, 1223, 1240, 1255, 1436
NlaIV	GGNNCC	1 cut(s)	1369
NmeAIII	GCCGAG	1 cut(s)	1010
NmuCI	GTSAC	3 cut(s)	126, 1226, 1243
NsiI	ATGCAT	1 cut(s)	1078
NspI	RCATGY	1 cut(s)	1175
PaeR7I	CTCGAG	1 cut(s)	670
PagI	TCATGA	1 cut(s)	1236
PciSI	GCTCTTC	1 cut(s)	1423
PdmI	GAANNNNTTC	2 cut(s)	236, 1004
PinAI	ACCGGT	1 cut(s)	1230
PkrI	GCNGC	5 cut(s)	370, 634, 828, 861, 1143
PleI	GAGTC	1 cut(s)	1159
PpsI	GAGTC	1 cut(s)	1159
PshBI	ATTAAT	1 cut(s)	444
Psp1406I	AACGTT	1 cut(s)	1286
Psp6I	CCWGG	3 cut(s)	58, 990, 1177
PspEI	GGTNACC	1 cut(s)	1226
PspGI	CCWGG	3 cut(s)	58, 990, 1177
PspN4I	GGNNCC	1 cut(s)	1369
PspPI	GGNCC	1 cut(s)	1216
RsaI	GTAC	3 cut(s)	1055, 1176, 1382
RsaNI	GTAC	3 cut(s)	1054, 1175, 1381
RseI	CAYNNNNRTG	2 cut(s)	1224, 1241
SapI	GCTCTTC	1 cut(s)	1423
SaqAI	TTAA	7 cut(s)	396, 402, 444, 689, 785, 1283, 1385
SatI	GCNGC	5 cut(s)	369, 633, 827, 860, 1142
Sau3AI	GATC	6 cut(s)	211, 752, 796, 954, 1090, 1372
Sau96I	GGNCC	1 cut(s)	1216
ScaI	AGTACT	1 cut(s)	1382
SchI	GAGTC	1 cut(s)	1160
ScrFI	CCNGG	4 cut(s)	60, 242, 992, 1179
SexAI	ACCWGGT	1 cut(s)	1177
SfaNI	GCATC	5 cut(s)	576, 685, 831, 1063, 1297
SfcI	CTRYAG	1 cut(s)	1376
Sfr274I	CTCGAG	1 cut(s)	670
SlaI	CTCGAG	1 cut(s)	670
SmiMI	CAYNNNNRTG	2 cut(s)	1224, 1241
SmlI	CTYRAG	5 cut(s)	25, 372, 492, 670, 688
SmoI	CTYRAG	5 cut(s)	25, 372, 492, 670, 688
Sse9I	AATT	7 cut(s)	50, 82, 509, 562, 1064, 1300, 1424
SsiI	CCGC	3 cut(s)	829, 859, 870
SspMI	CTAG	3 cut(s)	105, 966, 1155
StyD4I	CCNGG	4 cut(s)	58, 240, 990, 1177
StyI	CCWWGG	2 cut(s)	160, 1219
TaaI	ACNGT	3 cut(s)	394, 1213, 1380
TaiI	ACGT	1 cut(s)	1289
TaqI	TCGA	7 cut(s)	284, 337, 527, 539, 609, 671, 998
TasI	AATT	7 cut(s)	50, 82, 509, 562, 1064, 1300, 1424
TatI	WGTACW	2 cut(s)	1053, 1380
TauI	GCSGC	1 cut(s)	862
Tru1I	TTAA	7 cut(s)	396, 402, 444, 689, 785, 1283, 1385
Tru9I	TTAA	7 cut(s)	396, 402, 444, 689, 785, 1283, 1385
TscAI	CASTG	1 cut(s)	1218
TseFI	GTSAC	3 cut(s)	126, 1226, 1243
TseI	GCWGC	4 cut(s)	368, 632, 826, 1141
Tsp45I	GTSAC	3 cut(s)	126, 1226, 1243
TspDTI	ATGAA	5 cut(s)	86, 402, 462, 997, 1225
TspGWI	ACGGA	2 cut(s)	671, 890
TspRI	CASTG	1 cut(s)	1218
Vha464I	CTTAAG	1 cut(s)	688
VspI	ATTAAT	1 cut(s)	444
XapI	RAATTY	4 cut(s)	50, 82, 1064, 1300
XceI	RCATGY	1 cut(s)	1175
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1409
XhoI	CTCGAG	1 cut(s)	670
XmnI	GAANNNNTTC	2 cut(s)	236, 1004
XspI	CTAG	3 cut(s)	105, 966, 1155
ZrmI	AGTACT	1 cut(s)	1382
Zsp2I	ATGCAT	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.