Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0005992

Physical Location & Seq

Genomic Coordinates Reverse (-)

22770346 .. 22776920

Gene Structure 6575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G012490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGATTGCAAAGAAGAGAGAGAGAGCGAGAGAGAGCAAAAGTGAAAAAACTCCCAAGTCCCTTTTTGAATTATTACTCTTTCACTTGTTTTGTTGGGCAGAAAATACTCTGTTTCTTTGGTTGAATAAAAGACTTGTTCTTGGGATCGGAAAGTGTTTGGTTCCGAGAGGACTCTGTTTAAGCGATCGGGTGTTGTTCTCTAAGACTGACTTTCCTGTTCCCCCCAAACATCCCACAACTGTAAACTGTTACAGGTTTCCAGTTTTTTGGGTTGAGTATGTGATCTGTGTCAATACAACTGGGCGAGAAGATTTCAAAGTTGAGACAAATATGGCAACTTATTATACTAATTCAAATAATCAAAAGGACGGTACGCCAATGCTCTATTCAAGGGAACCTTTAACTAGTTCATATCCAGAAACACCCGTTCTTCCTGGTAACATGATGATGTATATGAACTCGGGGTCATACTCGGATGCATTAGCTGGGAGTTCTCAGCAGCAAAACAACTGCATTGAAGTCGTTTCCTCAGTGGGGGCTTCGGATTCCAATACACAACAGCAGGATGTCTTATCACATCTTGGTGGCTCACGTATTGGAGAGCAAGGATTCAATGCATGGAGAGATAGTAGAAATGAGATGCTAGTTACGAATCCGATGGATGGTTCTGCAGCTATTCTTCATGGTGGACAGAACTTGCAAGGCCAGGGATTGTCCCTCAGCCTCTCATCAGGAATGCAAGTGCCTTCTATGTCATACCGGAATCCCAATATGGGTTTTGCTTCATTCTTAAGTCCTAATCCATCACTGTCAAGTGAGGGCAGGAATGGCACTTTCAGAGATGACCAGCCAAGAAATGTCGAATATTTGCAACCTAGTTTTCTTGGAGGCAATGCGGATTCAAGTAAAGGGGATTTGTCTCCATATGGGATGTCGAGTATTGCAAGGAACGTTCCCAATTCCAAGTATCTGAAAGCAGCACAACAACTGCTCGATGAAGTTGTCAACGTCCAGAAAGCACTGAAGCAGCATGACAGGGAGAAGAACGAAAGCACAAATGAGCATATGATGAAGAGTTTCAAGGAGGGTGATGATGGTTCAAAGAATGAGCTTGAAAGTGGAGAATCTTCAAACCCCCAAGAGTCCGCCAGTAATTCATCGTGTGAGCTTTCACATGCTGAGAAACAAGAGTTGCAAAACAAGCTGACTAAGCTTCTGTCTATGTTAGATGAGGTTGATAGAAGGTACAAACACTATTATCAGCAGATGCAGATTGTGGTATCATCATTTGATGCGATAGCAGGAAGTGGGGCAGCTAAACCATACACAGCAGTTGCTCTTCAAACAATTTCTCGCCACTTTCGATGCTTACGTGATGCAATCACAGGCCAGATACGAGCAACCCAAAAAAGCCTTGGGGAGCAAGGTACTTCAGGAAGCATTAAAGGGGTTGGAATTACTCGCCTCCGTTTCGTGGATCAGCAGCTCAGGCAGCAGAGAGCCCTTCAGCAGCTTGGTATGATGCAACAACATGCATGGAGGCCACAAAGAGGTCTGCCAGAAAGTTCTGTTTCGATTCTGCGAGCATGGCTGTTTGAGCATTTCCTTCATCCCTATCCCAAGGATTCTGATAAGATCATGCTAGCAAGGCAGACAGGCTTGACCAGAAGTCAGGTCTCAAACTGGTTTATAAATGCACGGGTGCGTCTCTGGAAACCCATGGTTGAGGAGATGTACAAAGAAGAGGCTGGTGATGCTGAAATGGACTCTAATTCTTCATCTGAAAATGCACCCCAAACCAAAAAAGGTGAGAAGAGGACCTTGGAAGACGGAGGGGAAGATATGCAGCCTAGTGCAAGTTCCACTGGCACTGATAGATGCAGCACGGGACAATTTATGGACTCCAAACCTGATCATTATGATGTGGAAATGGCTGGATCCACTGGGTCTGCCAGCTTCCAAAATGGGACTCGTCGTGAAGCTGAAGCTGAATTTGGGCTAGTGAAGCTTAGGCAGGGAGAAAGGCCTGGCATGGATGAAAGTAGTTTCTTTACTGATGGAATGGTTCAGTCTGATAGGAGCAGCGAAAGGTTTATGGCTGCATACCACATGCGGGAGTTGGGGAGGTTTGGAAGTGGAAGCGGCGTGTCTCTAACATTGGGGTTGCAGCATTGTGATGGTGGTAACATTCCTATCTCTAGTGGGACTCCTCACAGTTTTGTTGCCATGAGAGATGATGATTTGTACAATGCAGCAGCGTCTTCCGTTGGGTCAGAGACCGCAGATTTCGACCAGCAGCACAGATTTGGTTCCTCCCATCTATTACGCGATTTCGTAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

780

Amino Acids

86.67

Weight (kDa)

6.26

Isoelectric Point (pI)

43.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	318 - 462	7.9e-51	Associated with HOX
Homeobox_KN	PF05920	530 - 569	3.8e-19	Homeobox KN domain
Homeodomain	PF00046	537 - 569	2.3e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16400
fragaria_vesca	FvH4_2g09770 FvH4_2g09770 FvH4_2g09770
malus_domestica	MD05G1059800.v1.1 MD10G1068000.v1.1
prunus_persica	Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1
pyrus_communis	pycom05g05110 pycom05g05120 pycom10g05380
rosa_chinensis	RchiOBHm_Chr6g0266091 RchiOBHm_Chr6g0266111
rosa_laevigata	RLG00000014115
rosa_multiflora	Rmu_co8443717.1_g000001 Rmu_sc0004324.1_g000004
rosa_roxburghii	Rroxscaffold_174G00435200 Rroxscaffold_7G00201970
rosa_rugosa	Rorug06G0023900 Rorug06G0024000 Rorug06G0024100
rosa_samantha	Rh6AG144700 Rh6BG145100 Rh6CG141800 Rh6DG129400
rosa_wichuraiana	Rw6G012490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1691
AccII	CGCG	1 cut(s)	2328
AciI	CCGC	5 cut(s)	896, 1146, 2113, 2142, 2280
AclI	AACGTT	1 cut(s)	951
AclWI	GGATC	4 cut(s)	152, 1485, 1932, 1945
AcsI	RAATTY	1 cut(s)	1991
AcuI	CTGAAG	4 cut(s)	1043, 1416, 1490, 2004
AfaI	GTAC	5 cut(s)	373, 1247, 1429, 1736, 2246
AfiI	CCNNNNNNNGG	6 cut(s)	534, 662, 773, 1474, 1550, 2113
AflII	CTTAAG	1 cut(s)	790
AhdI	GACNNNNNGTC	1 cut(s)	1668
AhlI	ACTAGT	1 cut(s)	404
AjnI	CCWGG	3 cut(s)	433, 705, 2026
AjuI	GAANNNNNNNTTGG	6 cut(s)	370, 402, 1805, 1837, 1977, 2009
Alw26I	GTCTC	6 cut(s)	317, 924, 1681, 1712, 2154, 2270
AlwI	GGATC	4 cut(s)	152, 1485, 1932, 1945
Ama87I	CYCGRG	1 cut(s)	460
AoxI	GGCC	4 cut(s)	703, 1387, 1541, 2024
ApoI	RAATTY	1 cut(s)	1991
Asp700I	GAANNNNTTC	1 cut(s)	1076
AspS9I	GGNCC	1 cut(s)	1818
AsuHPI	GGTGA	3 cut(s)	1100, 1763, 1820
AsuNHI	GCTAGC	1 cut(s)	1642
AvaI	CYCGRG	1 cut(s)	460
AvaII	GGWCC	1 cut(s)	1818
BamHI	GGATCC	1 cut(s)	1937
BanII	GRGCYC	1 cut(s)	1504
BbsI	GAAGAC	2 cut(s)	1833, 2253
BbvCI	CCTCAGC	1 cut(s)	719
BccI	CCATC	7 cut(s)	652, 656, 811, 1088, 2051, 2171, 2325
BcgI	CGANNNNNNTGC	2 cut(s)	502, 536
BciT130I	CCWGG	3 cut(s)	435, 707, 2028
BclI	TGATCA	1 cut(s)	1912
BcoDI	GTCTC	6 cut(s)	317, 924, 1681, 1712, 2154, 2270
BcuI	ACTAGT	1 cut(s)	404
BfaI	CTAG	7 cut(s)	405, 644, 876, 1643, 1851, 2000, 2199
BfmI	CTRYAG	1 cut(s)	669
BfrI	CTTAAG	1 cut(s)	790
Bme1390I	CCNGG	3 cut(s)	435, 707, 2028
Bme18I	GGWCC	1 cut(s)	1818
BmeRI	GACNNNNNGTC	1 cut(s)	1668
BmeT110I	CYCGRG	1 cut(s)	460
BmgT120I	GGNCC	1 cut(s)	1818
BmiI	GGNNCC	4 cut(s)	162, 396, 1939, 2311
BmrFI	CCNGG	3 cut(s)	435, 707, 2028
BmrI	ACTGGG	2 cut(s)	309, 1953
BmsI	GCATC	9 cut(s)	466, 630, 1257, 1282, 1355, 1366, 1512, 1744, 1868
BmtI	GCTAGC	1 cut(s)	1646
BmuI	ACTGGG	2 cut(s)	309, 1953
BpiI	GAAGAC	2 cut(s)	1833, 2253
Bpu10I	CCTNAGC	3 cut(s)	719, 1487, 2009
BsaAI	YACGTR	2 cut(s)	593, 1373
BsaI	GGTCTC	2 cut(s)	1681, 2270
BsaJI	CCNNGG	5 cut(s)	706, 1414, 1620, 1719, 1821
BsaWI	WCCGGW	1 cut(s)	759
BsaXI	ACNNNNNCTCC	2 cut(s)	613, 643
Bsc4I	CCNNNNNNNGG	6 cut(s)	534, 662, 773, 1474, 1550, 2113
Bse1I	ACTGG	6 cut(s)	260, 304, 1149, 1688, 1870, 1948
Bse3DI	GCAATG	1 cut(s)	898
BseBI	CCWGG	3 cut(s)	435, 707, 2028
BseDI	CCNNGG	5 cut(s)	706, 1414, 1620, 1719, 1821
BseGI	GGATG	7 cut(s)	229, 481, 571, 667, 936, 1609, 2041
BseLI	CCNNNNNNNGG	6 cut(s)	534, 662, 773, 1474, 1550, 2113
BseMI	GCAATG	1 cut(s)	898
BseMII	CTCAG	5 cut(s)	509, 543, 733, 1170, 1501
BseNI	ACTGG	6 cut(s)	260, 304, 1149, 1688, 1870, 1948
BseRI	GAGGAG	2 cut(s)	1742, 2199
BseYI	CCCAGC	1 cut(s)	485
Bsh1236I	CGCG	1 cut(s)	2328
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	4 cut(s)	705, 1389, 1543, 2026
BsiEI	CGRYCG	1 cut(s)	187
BsiHKCI	CYCGRG	1 cut(s)	460
BsiSI	CCGG	1 cut(s)	760
BslFI	GGGAC	5 cut(s)	43, 700, 1902, 1981, 2218
BslI	CCNNNNNNNGG	6 cut(s)	534, 662, 773, 1474, 1550, 2113
BsmAI	GTCTC	6 cut(s)	317, 924, 1681, 1712, 2154, 2270
BsmBI	CGTCTC	1 cut(s)	1712
BsmFI	GGGAC	5 cut(s)	43, 700, 1902, 1981, 2218
BsmI	GAATGC	1 cut(s)	741
BsnI	GGCC	4 cut(s)	705, 1389, 1543, 2026
Bso31I	GGTCTC	2 cut(s)	1681, 2270
BsoBI	CYCGRG	1 cut(s)	460
Bsp1286I	GDGCHC	1 cut(s)	1504
Bsp1407I	TGTACA	2 cut(s)	1734, 2244
Bsp143I	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
Bsp19I	CCATGG	1 cut(s)	1719
BspACI	CCGC	5 cut(s)	896, 1146, 2113, 2142, 2280
BspANI	GGCC	4 cut(s)	705, 1389, 1543, 2026
BspCNI	CTCAG	5 cut(s)	508, 542, 732, 1171, 1500
BspFNI	CGCG	1 cut(s)	2328
BspLI	GGNNCC	4 cut(s)	162, 396, 1939, 2311
BspMAI	CTGCAG	1 cut(s)	673
BspOI	GCTAGC	1 cut(s)	1646
BspPI	GGATC	4 cut(s)	152, 1485, 1932, 1945
BspQI	GCTCTTC	1 cut(s)	1344
BspTI	CTTAAG	1 cut(s)	790
BspTNI	GGTCTC	2 cut(s)	1681, 2270
BsrDI	GCAATG	1 cut(s)	898
BsrGI	TGTACA	2 cut(s)	1734, 2244
BsrI	ACTGG	6 cut(s)	260, 304, 1149, 1688, 1870, 1948
BssECI	CCNNGG	5 cut(s)	706, 1414, 1620, 1719, 1821
BssMI	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
BssT1I	CCWWGG	4 cut(s)	1414, 1620, 1719, 1821
Bst2UI	CCWGG	3 cut(s)	435, 707, 2028
Bst4CI	ACNGT	5 cut(s)	241, 248, 371, 810, 2216
Bst6I	CTCTTC	5 cut(s)	8, 1067, 1344, 1737, 1808
BstAFI	CTTAAG	1 cut(s)	790
BstAUI	TGTACA	2 cut(s)	1734, 2244
BstBAI	YACGTR	2 cut(s)	593, 1373
BstC8I	GCNNGC	3 cut(s)	1584, 1644, 1954
BstDEI	CTNAG	8 cut(s)	201, 495, 529, 719, 1179, 1209, 1487, 2009
BstDSI	CCRYGG	1 cut(s)	1719
BstF5I	GGATG	7 cut(s)	229, 481, 571, 667, 936, 1609, 2041
BstFNI	CGCG	1 cut(s)	2328
BstKTI	GATC	7 cut(s)	147, 187, 285, 1480, 1638, 1915, 1940
BstMAI	GTCTC	6 cut(s)	317, 924, 1681, 1712, 2154, 2270
BstMBI	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
BstMCI	CGRYCG	1 cut(s)	187
BstNI	CCWGG	3 cut(s)	435, 707, 2028
BstNSI	RCATGY	3 cut(s)	1178, 1535, 2113
BstSCI	CCNGG	3 cut(s)	433, 705, 2026
BstSFI	CTRYAG	1 cut(s)	669
BstUI	CGCG	1 cut(s)	2328
BstV2I	GAAGAC	2 cut(s)	1833, 2253
BstX2I	RGATCY	1 cut(s)	1937
BstXI	CCANNNNNNTGG	1 cut(s)	267
BstYI	RGATCY	1 cut(s)	1937
BsuRI	GGCC	4 cut(s)	705, 1389, 1543, 2026
BtgI	CCRYGG	1 cut(s)	1719
BtsCI	GGATG	7 cut(s)	229, 481, 571, 667, 936, 1609, 2041
BtsIMutI	CAGTG	6 cut(s)	537, 806, 1019, 1863, 1869, 1941
Cac8I	GCNNGC	3 cut(s)	1584, 1644, 1954
Cfr13I	GGNCC	1 cut(s)	1818
CseI	GACGC	2 cut(s)	1694, 2247
Csp6I	GTAC	5 cut(s)	372, 1246, 1428, 1735, 2245
CviQI	GTAC	5 cut(s)	372, 1246, 1428, 1735, 2245
DdeI	CTNAG	8 cut(s)	201, 495, 529, 719, 1179, 1209, 1487, 2009
DpnI	GATC	7 cut(s)	146, 186, 284, 1479, 1637, 1914, 1939
DpnII	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
DriI	GACNNNNNGTC	1 cut(s)	1668
Eam1104I	CTCTTC	5 cut(s)	8, 1067, 1344, 1737, 1808
Eam1105I	GACNNNNNGTC	1 cut(s)	1668
EarI	CTCTTC	5 cut(s)	8, 1067, 1344, 1737, 1808
EciI	GGCGGA	1 cut(s)	1135
Eco130I	CCWWGG	4 cut(s)	1414, 1620, 1719, 1821
Eco147I	AGGCCT	1 cut(s)	2026
Eco24I	GRGCYC	1 cut(s)	1504
Eco31I	GGTCTC	2 cut(s)	1681, 2270
Eco47I	GGWCC	1 cut(s)	1818
Eco57I	CTGAAG	4 cut(s)	1043, 1416, 1490, 2004
Eco88I	CYCGRG	1 cut(s)	460
EcoO109I	RGGNCCY	1 cut(s)	1818
EcoRII	CCWGG	3 cut(s)	433, 705, 2026
EcoT14I	CCWWGG	4 cut(s)	1414, 1620, 1719, 1821
EcoT22I	ATGCAT	3 cut(s)	481, 619, 1537
EcoT38I	GRGCYC	1 cut(s)	1504
ErhI	CCWWGG	4 cut(s)	1414, 1620, 1719, 1821
Esp3I	CGTCTC	1 cut(s)	1712
FalI	AAGNNNNNCTT	6 cut(s)	194, 226, 382, 414, 1805, 1837
FaqI	GGGAC	5 cut(s)	43, 700, 1902, 1981, 2218
FauI	CCCGC	1 cut(s)	2106
FauNDI	CATATG	2 cut(s)	925, 1065
FbaI	TGATCA	1 cut(s)	1912
FokI	GGATG	7 cut(s)	216, 488, 578, 674, 943, 1596, 2048
FriOI	GRGCYC	1 cut(s)	1504
FspBI	CTAG	7 cut(s)	405, 644, 876, 1643, 1851, 2000, 2199
GsaI	CCCAGC	1 cut(s)	489
HaeIII	GGCC	4 cut(s)	705, 1389, 1543, 2026
HapII	CCGG	1 cut(s)	760
HgaI	GACGC	2 cut(s)	1694, 2247
HincII	GTYRAC	1 cut(s)	1006
HindII	GTYRAC	1 cut(s)	1006
HindIII	AAGCTT	2 cut(s)	1211, 2006
HpaII	CCGG	1 cut(s)	760
HphI	GGTGA	3 cut(s)	1100, 1763, 1820
Hpy166II	GTNNAC	3 cut(s)	244, 689, 1006
Hpy188III	TCNNGA	6 cut(s)	416, 732, 1012, 1434, 1711, 1976
Hpy8I	GTNNAC	3 cut(s)	244, 689, 1006
Hpy99I	CGWCG	1 cut(s)	1977
HpyAV	CCTTC	4 cut(s)	756, 1236, 1514, 1616
HpyCH4III	ACNGT	5 cut(s)	241, 248, 371, 810, 2216
HpyCH4IV	ACGT	4 cut(s)	592, 951, 1008, 1372
HpyF3I	CTNAG	8 cut(s)	201, 495, 529, 719, 1179, 1209, 1487, 2009
HpySE526I	ACGT	4 cut(s)	592, 951, 1008, 1372
Ksp22I	TGATCA	1 cut(s)	1912
Kzo9I	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
LguI	GCTCTTC	1 cut(s)	1344
LmnI	GCTCC	2 cut(s)	1420, 2079
LweI	GCATC	9 cut(s)	466, 630, 1257, 1282, 1355, 1366, 1512, 1744, 1868
MaeI	CTAG	7 cut(s)	405, 644, 876, 1643, 1851, 2000, 2199
MaeII	ACGT	4 cut(s)	592, 951, 1008, 1372
MaeIII	GTNAC	4 cut(s)	248, 437, 646, 2183
MalI	GATC	7 cut(s)	146, 186, 284, 1479, 1637, 1914, 1939
MboI	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
MflI	RGATCY	1 cut(s)	1937
MhlI	GDGCHC	1 cut(s)	1504
MluCI	AATT	9 cut(s)	68, 349, 958, 1153, 1347, 1455, 1771, 1892, 1991
MlyI	GAGTC	6 cut(s)	165, 1151, 1760, 1895, 1963, 2200
MmeI	TCCRAC	1 cut(s)	1432
Mph1103I	ATGCAT	3 cut(s)	481, 619, 1537
MroXI	GAANNNNTTC	1 cut(s)	1076
MseI	TTAA	4 cut(s)	179, 401, 791, 1443
MslI	CAYNNNNRTG	4 cut(s)	446, 582, 1920, 2175
MspCI	CTTAAG	1 cut(s)	790
MspI	CCGG	1 cut(s)	760
MspR9I	CCNGG	3 cut(s)	435, 707, 2028
Mva1269I	GAATGC	1 cut(s)	741
MvaI	CCWGG	3 cut(s)	435, 707, 2028
MvnI	CGCG	1 cut(s)	2328
NcoI	CCATGG	1 cut(s)	1719
NdeI	CATATG	2 cut(s)	925, 1065
NdeII	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
NheI	GCTAGC	1 cut(s)	1642
NlaIV	GGNNCC	4 cut(s)	162, 396, 1939, 2311
NsiI	ATGCAT	3 cut(s)	481, 619, 1537
NspI	RCATGY	3 cut(s)	1178, 1535, 2113
PceI	AGGCCT	1 cut(s)	2026
PciSI	GCTCTTC	1 cut(s)	1344
PcsI	WCGNNNNNNNCGW	2 cut(s)	1360, 1369
PctI	GAATGC	1 cut(s)	741
PdmI	GAANNNNTTC	1 cut(s)	1076
PfeI	GAWTC	8 cut(s)	545, 609, 652, 763, 899, 1124, 1576, 1625
Ple19I	CGATCG	1 cut(s)	187
PleI	GAGTC	6 cut(s)	165, 1150, 1760, 1895, 1963, 2200
PpsI	GAGTC	6 cut(s)	165, 1150, 1760, 1895, 1963, 2200
Ppu21I	YACGTR	2 cut(s)	593, 1373
PpuMI	RGGWCCY	1 cut(s)	1818
PsiI	TTATAA	1 cut(s)	1691
Psp1406I	AACGTT	1 cut(s)	951
Psp5II	RGGWCCY	1 cut(s)	1818
Psp6I	CCWGG	3 cut(s)	433, 705, 2026
PspFI	CCCAGC	1 cut(s)	485
PspGI	CCWGG	3 cut(s)	433, 705, 2026
PspN4I	GGNNCC	4 cut(s)	162, 396, 1939, 2311
PspPI	GGNCC	1 cut(s)	1818
PspPPI	RGGWCCY	1 cut(s)	1818
PstI	CTGCAG	1 cut(s)	673
PsuI	RGATCY	1 cut(s)	1937
PvuI	CGATCG	1 cut(s)	187
RsaI	GTAC	5 cut(s)	373, 1247, 1429, 1736, 2246
RsaNI	GTAC	5 cut(s)	372, 1246, 1428, 1735, 2245
RseI	CAYNNNNRTG	4 cut(s)	446, 582, 1920, 2175
SapI	GCTCTTC	1 cut(s)	1344
SaqAI	TTAA	4 cut(s)	179, 401, 791, 1443
Sau3AI	GATC	7 cut(s)	144, 184, 282, 1477, 1635, 1912, 1937
Sau96I	GGNCC	1 cut(s)	1818
SchI	GAGTC	6 cut(s)	165, 1151, 1760, 1895, 1963, 2200
ScrFI	CCNGG	3 cut(s)	435, 707, 2028
SduI	GDGCHC	1 cut(s)	1504
SfaNI	GCATC	9 cut(s)	466, 630, 1257, 1282, 1355, 1366, 1512, 1744, 1868
SfcI	CTRYAG	1 cut(s)	669
SinI	GGWCC	1 cut(s)	1818
SmiMI	CAYNNNNRTG	4 cut(s)	446, 582, 1920, 2175
SmlI	CTYRAG	1 cut(s)	790
SmoI	CTYRAG	1 cut(s)	790
SpeI	ACTAGT	1 cut(s)	404
Sse9I	AATT	9 cut(s)	68, 349, 958, 1153, 1347, 1455, 1771, 1892, 1991
SseBI	AGGCCT	1 cut(s)	2026
SsiI	CCGC	5 cut(s)	896, 1146, 2113, 2142, 2280
SspI	AATATT	1 cut(s)	866
SspMI	CTAG	7 cut(s)	405, 644, 876, 1643, 1851, 2000, 2199
StuI	AGGCCT	1 cut(s)	2026
StyD4I	CCNGG	3 cut(s)	433, 705, 2026
StyI	CCWWGG	4 cut(s)	1414, 1620, 1719, 1821
TaaI	ACNGT	5 cut(s)	241, 248, 371, 810, 2216
TaiI	ACGT	4 cut(s)	595, 954, 1011, 1375
TaqI	TCGA	6 cut(s)	861, 935, 993, 1363, 1574, 2289
TasI	AATT	9 cut(s)	68, 349, 958, 1153, 1347, 1455, 1771, 1892, 1991
TatI	WGTACW	2 cut(s)	1734, 2244
TauI	GCSGC	1 cut(s)	2145
TfiI	GAWTC	8 cut(s)	545, 609, 652, 763, 899, 1124, 1576, 1625
Tru1I	TTAA	4 cut(s)	179, 401, 791, 1443
Tru9I	TTAA	4 cut(s)	179, 401, 791, 1443
TscAI	CASTG	6 cut(s)	537, 813, 1026, 1870, 1876, 1948
TspGWI	ACGGA	3 cut(s)	1457, 1845, 2254
TspRI	CASTG	6 cut(s)	537, 813, 1026, 1870, 1876, 1948
Vha464I	CTTAAG	1 cut(s)	790
VpaK11BI	GGWCC	1 cut(s)	1818
XapI	RAATTY	1 cut(s)	1991
XceI	RCATGY	3 cut(s)	1178, 1535, 2113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1412
XmnI	GAANNNNTTC	1 cut(s)	1076
XspI	CTAG	7 cut(s)	405, 644, 876, 1643, 1851, 2000, 2199
Zsp2I	ATGCAT	3 cut(s)	481, 619, 1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.