Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005992

Physical Location & Seq

Genomic Coordinates Forward (+)

10449018 .. 10455082

Gene Structure 6065 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1059800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGTCAACTTACTATGCTGGTTCGAATAATCAAAAAGATGCTACGCCAATGCTCTATTTAAGGGAACCACCTTTGCCTAGTTCTTATCCAGAAGCACCTCTTCTTACTGGTAACATGATGATGTATATGAACTCTGGGTCATACTCGGATGCAGTGGCTGGGAGTTCTCAGCAGCAAAACAACTGCATTGAAGTAATCTCCTCAGTGGAGGGTTCAGATTCCAACCAGCAGCAGCACGATGTCCTATCGCATCTTGGTGGAACGCGTATTGGAGAGCTGGGATTCAGTCCATGGAGGGAGGGTAGAAATGAGATGCTAGTTACGCACCCCATGGGTAGTTCTTCAGGTATTCTTCATGGTGGACAGAACTTGCAAGGTCAGGGGTTGTCCCTCAGCCTGAGTACACAAATCCCATCAGGAATGCAAATGCCTTCTATCTCATACCGCAATCCCAATATGGGTTTTGCTTCATTCTTAAGTCCTAACCCATCCGTTTCAAGTGAGGGTGACGGCAGGAATGGCTCTTTTAGAGATGAGCAGCCAAGAAATGTTGAATATTTGCCATCTGGTTTTCCGGGAGGCAATCCAGATTCAAGTAAAGGGGATTTGTCTCCATATGGGATGTCAAGTATTGCAAGAACCATTCCCCATAACAAATACCTCAAAGCAGCACAACAACTGCTTGATGAAGTCGTCAATGTCCAGAAAGCACTTAAGCAACATGATAGAGAGAAGAACCAAAGCACACACGATCATCATAAGAGTTTCAAGGAGGGAGATGATGGATCAAAGAATGATTTGGAGAGTGGAGTATCTTCAAACCCTCAAGAGTCGGCCAGTAACTCACCATGTGAGCTTTCACATGCCGAGAAACAAGAGTTGCAAAGCAAGTTGACGAAACTTCTGTCAATGCTAGATGAGGTTGACAGACGGTACAAGCAGTATTATCATCAGATGCAGATTGTTGTATCATCATTTGATGTGATAGCGGGAGGTGGGTCAGCTAAACCGTACACAGCAGTAGCCTTGCAGACTATTTCACGCCACTTTCGGTGCTTACGTGATGCAATCACAGGCCAGATACAAGCAACCCGTAAAAGCCTTGGGGAGCAAGGTGCCTCAGGAAGCATGAAAGGAGTTGGAATATCTCGCCTCCGTTATGTGGACCAGCATCTCAGGCAGCAGAGGGCCCTTCAGCAGCTTGGCATGATGCAACAACATGCATGGAGACCACAAAGAGGTTTGCCGGAAAGCTCTGTCTCAATTCTGCGAGCATGGCTATTTGAGCATTTCCTTCATCCCTATCCGAAGGATTCTGATAAGATCCTGCTAGCAAGGCAGACAGGCTTGACTAGAAGTCAGGTCTCAAACTGGTTTATAAATGCACGAGTGCGTCTCTGGAAGCCCATGGTTGAGGAGATGTACAAAGAAGAGGCTGGTGATGCCGAGATGGATTCCAACTCTTCATCTGAGAATGCACCTCAAACAAAAGAAGGTGACAACACGAGGCCCATGGAAGCCGGAGTACAAGATATGCAACCTAGTGCAAGTTCGACAGGCACTGAGAGATGCAGCACTGGACAATTTATGGACTCCAAATCCAACCATTTCCATGACGTGGAAATGGCTGGATCCGCTGGGGTTGCCAGTTTCCAGAATGTGACTTGTCACGAAGCTGAAGCTGAGTACGGGCTCGTGAAGCTTAGAGAGGGGCAAAGGCCTGGTATGGATGGATCTGGTCTCATTTCTGATGCAAATGTTCAGACTGATAGGAACAATGAGAGGTATATGGCAGCAGCTGCTGTGTACCAGATGCCGGAGCTGGGGAGATTTGGAAGTGGAAGCGGGGTGTCTCTGACATTGGGATTGCAGCATTGTGACGGTGGCGGTAGCCTACCCATCTCTAGTGGGACTCATCACGGTTTTGTTGCCGTGAGAGGGGACGATTTATACAACCCTGCAGCTTCTTCTGTAGGATCTGAGACAGCAGATTTTGAATGCCTTGATTCCGGGAACCAGCAGCAACACAGATTTAGTTCCTCCCATCTATTACGTGATTTCGTAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

690

Amino Acids

75.31

Weight (kDa)

5.89

Isoelectric Point (pI)

46.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	216 - 358	4.2e-49	Associated with HOX
Homeobox_KN	PF05920	426 - 465	1.7e-18	Homeobox KN domain
Homeodomain	PF00046	433 - 465	3.9e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16400
fragaria_vesca	FvH4_2g09770 FvH4_2g09770 FvH4_2g09770
malus_domestica	MD05G1059800.v1.1 MD10G1068000.v1.1
prunus_persica	Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1
pyrus_communis	pycom05g05110 pycom05g05120 pycom10g05380
rosa_chinensis	RchiOBHm_Chr6g0266091 RchiOBHm_Chr6g0266111
rosa_laevigata	RLG00000014115
rosa_multiflora	Rmu_co8443717.1_g000001 Rmu_sc0004324.1_g000004
rosa_roxburghii	Rroxscaffold_174G00435200 Rroxscaffold_7G00201970
rosa_rugosa	Rorug06G0023900 Rorug06G0024000 Rorug06G0024100
rosa_samantha	Rh6AG144700 Rh6BG145100 Rh6CG141800 Rh6DG129400
rosa_wichuraiana	Rw6G012490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1379
AccB1I	GGYRCC	1 cut(s)	1115
AccB7I	CCANNNNNTGG	1 cut(s)	1618
AccII	CGCG	1 cut(s)	265
AciI	CCGC	5 cut(s)	445, 989, 1635, 1845, 1887
AclWI	GGATC	6 cut(s)	793, 1318, 1626, 1639, 1741, 1984
AcoI	YGGCCR	1 cut(s)	834
AcuI	CTGAAG	3 cut(s)	327, 1178, 1698
AdeI	CACNNNGTG	1 cut(s)	851
AfaI	GTAC	7 cut(s)	403, 935, 1013, 1424, 1527, 1688, 1808
AfiI	CCNNNNNNNGG	7 cut(s)	458, 1162, 1238, 1618, 1816, 1823, 1938
AflII	CTTAAG	2 cut(s)	475, 713
AflIII	ACRYGT	1 cut(s)	263
AgsI	TTSAA	7 cut(s)	191, 498, 554, 594, 769, 819, 1997
AhdI	GACNNNNNGTC	1 cut(s)	1356
AjiI	CACGTC	1 cut(s)	1618
AjnI	CCWGG	1 cut(s)	1720
Alw26I	GTCTC	8 cut(s)	615, 1222, 1264, 1369, 1400, 1745, 1857, 1976
AlwI	GGATC	6 cut(s)	793, 1318, 1626, 1639, 1741, 1984
AlwNI	CAGNNNCTG	4 cut(s)	158, 1562, 1799, 1802
AoxI	GGCC	5 cut(s)	834, 1075, 1188, 1508, 1718
ApaI	GGGCCC	1 cut(s)	1192
ArsI	GACNNNNNNTTYG	2 cut(s)	890, 922
AspS9I	GGNCC	4 cut(s)	1165, 1188, 1189, 1509
AsuC2I	CCSGG	2 cut(s)	576, 2011
AsuHPI	GGTGA	4 cut(s)	518, 837, 1451, 1508
AsuII	TTCGAA	1 cut(s)	23
AsuNHI	GCTAGC	1 cut(s)	1330
AvaII	GGWCC	1 cut(s)	1165
AxyI	CCTNAGG	1 cut(s)	1120
BaeGI	GKGCMC	1 cut(s)	1192
BamHI	GGATCC	1 cut(s)	1631
BanI	GGYRCC	1 cut(s)	1115
BanII	GRGCYC	2 cut(s)	1192, 1695
BarI	GAAGNNNNNNTAC	2 cut(s)	1509, 1541
BauI	CACGAG	3 cut(s)	1386, 1504, 1694
BbvCI	CCTCAGC	1 cut(s)	392
BccI	CCATC	8 cut(s)	421, 496, 571, 776, 1444, 1724, 1907, 2052
BceAI	ACGGC	2 cut(s)	526, 1916
BciT130I	CCWGG	1 cut(s)	1722
BcnI	CCSGG	2 cut(s)	576, 2011
BcoDI	GTCTC	8 cut(s)	615, 1222, 1264, 1369, 1400, 1745, 1857, 1976
BfaI	CTAG	7 cut(s)	78, 317, 914, 1331, 1353, 1542, 1905
BfmI	CTRYAG	2 cut(s)	1959, 1971
BfrI	CTTAAG	2 cut(s)	475, 713
Bme1390I	CCNGG	3 cut(s)	576, 1722, 2011
Bme18I	GGWCC	1 cut(s)	1165
BmeRI	GACNNNNNGTC	1 cut(s)	1356
BmgBI	CACGTC	1 cut(s)	1618
BmgT120I	GGNCC	4 cut(s)	1165, 1188, 1189, 1509
BmiI	GGNNCC	5 cut(s)	66, 1117, 1190, 1633, 2015
BmrFI	CCNGG	3 cut(s)	576, 1722, 2011
BmtI	GCTAGC	1 cut(s)	1334
BplI	GAGNNNNNCTC	2 cut(s)	1380, 1412
Bpu10I	CCTNAGC	1 cut(s)	392
Bpu14I	TTCGAA	1 cut(s)	23
BpuEI	CTTGAG	1 cut(s)	810
BpuMI	CCSGG	2 cut(s)	576, 2011
BsaAI	YACGTR	2 cut(s)	1061, 2054
BsaI	GGTCTC	3 cut(s)	1222, 1369, 1745
BsaJI	CCNNGG	5 cut(s)	290, 330, 1102, 1407, 1512
BsaXI	ACNNNNNCTCC	2 cut(s)	286, 316
Bsc4I	CCNNNNNNNGG	7 cut(s)	458, 1162, 1238, 1618, 1816, 1823, 1938
Bse1I	ACTGG	5 cut(s)	112, 837, 1376, 1582, 1647
Bse21I	CCTNAGG	1 cut(s)	1120
BseBI	CCWGG	1 cut(s)	1722
BseDI	CCNNGG	5 cut(s)	290, 330, 1102, 1407, 1512
BseGI	GGATG	5 cut(s)	154, 488, 627, 1297, 1735
BseLI	CCNNNNNNNGG	7 cut(s)	458, 1162, 1238, 1618, 1816, 1823, 1938
BseNI	ACTGG	5 cut(s)	112, 837, 1376, 1582, 1647
BseRI	GAGGAG	2 cut(s)	190, 1430
BseSI	GKGCMC	1 cut(s)	1192
BseYI	CCCAGC	4 cut(s)	158, 277, 1637, 1822
Bsh1236I	CGCG	1 cut(s)	265
BshFI	GGCC	5 cut(s)	836, 1077, 1190, 1510, 1720
BshNI	GGYRCC	1 cut(s)	1115
BsiSI	CCGG	5 cut(s)	575, 1247, 1521, 1817, 2010
BslFI	GGGAC	3 cut(s)	373, 1924, 1955
BslI	CCNNNNNNNGG	7 cut(s)	458, 1162, 1238, 1618, 1816, 1823, 1938
BsmAI	GTCTC	8 cut(s)	615, 1222, 1264, 1369, 1400, 1745, 1857, 1976
BsmBI	CGTCTC	1 cut(s)	1400
BsmFI	GGGAC	3 cut(s)	373, 1924, 1955
BsmI	GAATGC	3 cut(s)	426, 1480, 2003
BsnI	GGCC	5 cut(s)	836, 1077, 1190, 1510, 1720
Bso31I	GGTCTC	3 cut(s)	1222, 1369, 1745
Bsp119I	TTCGAA	1 cut(s)	23
Bsp120I	GGGCCC	1 cut(s)	1188
Bsp1286I	GDGCHC	2 cut(s)	1192, 1695
Bsp1407I	TGTACA	1 cut(s)	1422
Bsp143I	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
Bsp19I	CCATGG	4 cut(s)	290, 330, 1407, 1512
BspACI	CCGC	5 cut(s)	445, 989, 1635, 1845, 1887
BspANI	GGCC	5 cut(s)	836, 1077, 1190, 1510, 1720
BspFNI	CGCG	1 cut(s)	265
BspLI	GGNNCC	5 cut(s)	66, 1117, 1190, 1633, 2015
BspMAI	CTGCAG	1 cut(s)	1963
BspOI	GCTAGC	1 cut(s)	1334
BspPI	GGATC	6 cut(s)	793, 1318, 1626, 1639, 1741, 1984
BspT104I	TTCGAA	1 cut(s)	23
BspT107I	GGYRCC	1 cut(s)	1115
BspTI	CTTAAG	2 cut(s)	475, 713
BspTNI	GGTCTC	3 cut(s)	1222, 1369, 1745
BsrGI	TGTACA	1 cut(s)	1422
BsrI	ACTGG	5 cut(s)	112, 837, 1376, 1582, 1647
BssECI	CCNNGG	5 cut(s)	290, 330, 1102, 1407, 1512
BssMI	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
BssSI	CACGAG	3 cut(s)	1386, 1504, 1694
BssT1I	CCWWGG	5 cut(s)	290, 330, 1102, 1407, 1512
Bst2BI	CACGAG	3 cut(s)	1386, 1504, 1694
Bst2UI	CCWGG	1 cut(s)	1722
Bst4CI	ACNGT	4 cut(s)	933, 1011, 1883, 1922
Bst6I	CTCTTC	3 cut(s)	105, 1425, 1468
BstAFI	CTTAAG	2 cut(s)	475, 713
BstAPI	GCANNNNNTGC	1 cut(s)	1799
BstAUI	TGTACA	1 cut(s)	1422
BstBAI	YACGTR	2 cut(s)	1061, 2054
BstBI	TTCGAA	1 cut(s)	23
BstC8I	GCNNGC	2 cut(s)	1272, 1332
BstDSI	CCRYGG	4 cut(s)	290, 330, 1407, 1512
BstF5I	GGATG	5 cut(s)	154, 488, 627, 1297, 1735
BstFNI	CGCG	1 cut(s)	265
BstKTI	GATC	6 cut(s)	754, 788, 1326, 1634, 1736, 1979
BstMAI	GTCTC	8 cut(s)	615, 1222, 1264, 1369, 1400, 1745, 1857, 1976
BstMBI	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
BstNI	CCWGG	1 cut(s)	1722
BstNSI	RCATGY	2 cut(s)	866, 1223
BstSCI	CCNGG	3 cut(s)	574, 1720, 2009
BstSFI	CTRYAG	2 cut(s)	1959, 1971
BstSLI	GKGCMC	1 cut(s)	1192
BstUI	CGCG	1 cut(s)	265
BstX2I	RGATCY	4 cut(s)	1323, 1631, 1733, 1976
BstYI	RGATCY	4 cut(s)	1323, 1631, 1733, 1976
Bsu36I	CCTNAGG	1 cut(s)	1120
BsuRI	GGCC	5 cut(s)	836, 1077, 1190, 1510, 1720
BtgI	CCRYGG	4 cut(s)	290, 330, 1407, 1512
BtrI	CACGTC	1 cut(s)	1618
BtsCI	GGATG	5 cut(s)	154, 488, 627, 1297, 1735
BtsI	GCAGTG	1 cut(s)	159
BtsIMutI	CAGTG	4 cut(s)	159, 210, 1560, 1575
Cac8I	GCNNGC	2 cut(s)	1272, 1332
CaiI	CAGNNNCTG	4 cut(s)	158, 1562, 1799, 1802
Cfr13I	GGNCC	4 cut(s)	1165, 1188, 1189, 1509
CseI	GACGC	1 cut(s)	1382
Csp6I	GTAC	7 cut(s)	402, 934, 1012, 1423, 1526, 1687, 1807
CviQI	GTAC	7 cut(s)	402, 934, 1012, 1423, 1526, 1687, 1807
DpnI	GATC	6 cut(s)	753, 787, 1325, 1633, 1735, 1978
DpnII	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
DraIII	CACNNNGTG	1 cut(s)	851
DriI	GACNNNNNGTC	1 cut(s)	1356
EaeI	YGGCCR	1 cut(s)	834
Eam1104I	CTCTTC	3 cut(s)	105, 1425, 1468
Eam1105I	GACNNNNNGTC	1 cut(s)	1356
EarI	CTCTTC	3 cut(s)	105, 1425, 1468
Eco130I	CCWWGG	5 cut(s)	290, 330, 1102, 1407, 1512
Eco147I	AGGCCT	1 cut(s)	1720
Eco24I	GRGCYC	2 cut(s)	1192, 1695
Eco31I	GGTCTC	3 cut(s)	1222, 1369, 1745
Eco47I	GGWCC	1 cut(s)	1165
Eco57I	CTGAAG	3 cut(s)	327, 1178, 1698
Eco81I	CCTNAGG	1 cut(s)	1120
EcoO109I	RGGNCCY	2 cut(s)	1188, 1189
EcoRII	CCWGG	1 cut(s)	1720
EcoT14I	CCWWGG	5 cut(s)	290, 330, 1102, 1407, 1512
EcoT22I	ATGCAT	1 cut(s)	1225
EcoT38I	GRGCYC	2 cut(s)	1192, 1695
ErhI	CCWWGG	5 cut(s)	290, 330, 1102, 1407, 1512
Esp3I	CGTCTC	1 cut(s)	1400
FalI	AAGNNNNNCTT	2 cut(s)	84, 116
FaqI	GGGAC	3 cut(s)	373, 1924, 1955
FauI	CCCGC	2 cut(s)	982, 1838
FauNDI	CATATG	1 cut(s)	616
FokI	GGATG	5 cut(s)	161, 475, 634, 1284, 1742
FriOI	GRGCYC	2 cut(s)	1192, 1695
FspBI	CTAG	7 cut(s)	78, 317, 914, 1331, 1353, 1542, 1905
GsaI	CCCAGC	4 cut(s)	162, 281, 1641, 1826
HaeIII	GGCC	5 cut(s)	836, 1077, 1190, 1510, 1720
HapII	CCGG	5 cut(s)	575, 1247, 1521, 1817, 2010
HgaI	GACGC	1 cut(s)	1382
HincII	GTYRAC	3 cut(s)	6, 894, 925
HindII	GTYRAC	3 cut(s)	6, 894, 925
HindIII	AAGCTT	1 cut(s)	1700
HinfI	GANTC	9 cut(s)	218, 282, 590, 830, 1313, 1454, 1592, 1912, 2006
HpaII	CCGG	5 cut(s)	575, 1247, 1521, 1817, 2010
HphI	GGTGA	4 cut(s)	518, 837, 1451, 1508
Hpy166II	GTNNAC	8 cut(s)	6, 362, 404, 894, 925, 1014, 1165, 1807
Hpy8I	GTNNAC	8 cut(s)	6, 362, 404, 894, 925, 1014, 1165, 1807
HpyAV	CCTTC	5 cut(s)	441, 1202, 1303, 1304, 1487
HpyCH4III	ACNGT	4 cut(s)	933, 1011, 1883, 1922
HpyCH4IV	ACGT	3 cut(s)	1060, 1617, 2053
HpySE526I	ACGT	3 cut(s)	1060, 1617, 2053
Kzo9I	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
LmnI	GCTCC	2 cut(s)	1108, 1819
MaeI	CTAG	7 cut(s)	78, 317, 914, 1331, 1353, 1542, 1905
MaeII	ACGT	3 cut(s)	1060, 1617, 2053
MaeIII	GTNAC	8 cut(s)	110, 319, 506, 839, 1496, 1660, 1667, 1877
MalI	GATC	6 cut(s)	753, 787, 1325, 1633, 1735, 1978
MboI	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
MboII	GAAGA	8 cut(s)	92, 333, 344, 745, 807, 1442, 1455, 1959
MflI	RGATCY	4 cut(s)	1323, 1631, 1733, 1976
MhlI	GDGCHC	2 cut(s)	1192, 1695
MluCI	AATT	2 cut(s)	1263, 1583
MluI	ACGCGT	1 cut(s)	263
MlyI	GAGTC	3 cut(s)	839, 1586, 1906
MmeI	TCCRAC	4 cut(s)	246, 1120, 1482, 1626
Mph1103I	ATGCAT	1 cut(s)	1225
MseI	TTAA	3 cut(s)	59, 476, 714
MslI	CAYNNNNRTG	3 cut(s)	119, 255, 1611
MspA1I	CMGCKG	2 cut(s)	1637, 1799
MspCI	CTTAAG	2 cut(s)	475, 713
MspI	CCGG	5 cut(s)	575, 1247, 1521, 1817, 2010
MspR9I	CCNGG	3 cut(s)	576, 1722, 2011
Mva1269I	GAATGC	3 cut(s)	426, 1480, 2003
MvaI	CCWGG	1 cut(s)	1722
MvnI	CGCG	1 cut(s)	265
NciI	CCSGG	2 cut(s)	576, 2011
NcoI	CCATGG	4 cut(s)	290, 330, 1407, 1512
NdeI	CATATG	1 cut(s)	616
NdeII	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
NheI	GCTAGC	1 cut(s)	1330
NlaIV	GGNNCC	5 cut(s)	66, 1117, 1190, 1633, 2015
NmeAIII	GCCGAG	2 cut(s)	892, 1471
NmuCI	GTSAC	5 cut(s)	506, 1496, 1660, 1667, 1877
NsiI	ATGCAT	1 cut(s)	1225
NspI	RCATGY	2 cut(s)	866, 1223
NspV	TTCGAA	1 cut(s)	23
PceI	AGGCCT	1 cut(s)	1720
PcsI	WCGNNNNNNNCGW	1 cut(s)	1057
PctI	GAATGC	3 cut(s)	426, 1480, 2003
PfeI	GAWTC	6 cut(s)	218, 282, 590, 1313, 1454, 2006
PflMI	CCANNNNNTGG	1 cut(s)	1618
PfoI	TCCNGGA	2 cut(s)	574, 2009
PleI	GAGTC	3 cut(s)	838, 1586, 1906
PpsI	GAGTC	3 cut(s)	838, 1586, 1906
Ppu21I	YACGTR	2 cut(s)	1061, 2054
PsiI	TTATAA	1 cut(s)	1379
Psp6I	CCWGG	1 cut(s)	1720
PspFI	CCCAGC	4 cut(s)	158, 277, 1637, 1822
PspGI	CCWGG	1 cut(s)	1720
PspN4I	GGNNCC	5 cut(s)	66, 1117, 1190, 1633, 2015
PspOMI	GGGCCC	1 cut(s)	1188
PspPI	GGNCC	4 cut(s)	1165, 1188, 1189, 1509
PstI	CTGCAG	1 cut(s)	1963
PstNI	CAGNNNCTG	4 cut(s)	158, 1562, 1799, 1802
PsuI	RGATCY	4 cut(s)	1323, 1631, 1733, 1976
PvuII	CAGCTG	1 cut(s)	1799
RsaI	GTAC	7 cut(s)	403, 935, 1013, 1424, 1527, 1688, 1808
RsaNI	GTAC	7 cut(s)	402, 934, 1012, 1423, 1526, 1687, 1807
RseI	CAYNNNNRTG	3 cut(s)	119, 255, 1611
SaqAI	TTAA	3 cut(s)	59, 476, 714
Sau3AI	GATC	6 cut(s)	751, 785, 1323, 1631, 1733, 1976
Sau96I	GGNCC	4 cut(s)	1165, 1188, 1189, 1509
SchI	GAGTC	3 cut(s)	839, 1586, 1906
ScrFI	CCNGG	3 cut(s)	576, 1722, 2011
SduI	GDGCHC	2 cut(s)	1192, 1695
SfcI	CTRYAG	2 cut(s)	1959, 1971
SfuI	TTCGAA	1 cut(s)	23
SinI	GGWCC	1 cut(s)	1165
SmiMI	CAYNNNNRTG	3 cut(s)	119, 255, 1611
SmlI	CTYRAG	3 cut(s)	475, 713, 825
SmoI	CTYRAG	3 cut(s)	475, 713, 825
Sse9I	AATT	2 cut(s)	1263, 1583
SseBI	AGGCCT	1 cut(s)	1720
SsiI	CCGC	5 cut(s)	445, 989, 1635, 1845, 1887
SspI	AATATT	1 cut(s)	557
SspMI	CTAG	7 cut(s)	78, 317, 914, 1331, 1353, 1542, 1905
StuI	AGGCCT	1 cut(s)	1720
StyD4I	CCNGG	3 cut(s)	574, 1720, 2009
StyI	CCWWGG	5 cut(s)	290, 330, 1102, 1407, 1512
TaaI	ACNGT	4 cut(s)	933, 1011, 1883, 1922
TaiI	ACGT	3 cut(s)	1063, 1620, 2056
TaqI	TCGA	2 cut(s)	23, 1553
TasI	AATT	2 cut(s)	1263, 1583
TatI	WGTACW	3 cut(s)	401, 1422, 1525
TfiI	GAWTC	6 cut(s)	218, 282, 590, 1313, 1454, 2006
Tru1I	TTAA	3 cut(s)	59, 476, 714
Tru9I	TTAA	3 cut(s)	59, 476, 714
TscAI	CASTG	4 cut(s)	159, 210, 1567, 1582
TseFI	GTSAC	5 cut(s)	506, 1496, 1660, 1667, 1877
Tsp45I	GTSAC	5 cut(s)	506, 1496, 1660, 1667, 1877
TspDTI	ATGAA	7 cut(s)	143, 344, 459, 702, 1145, 1286, 1455
TspGWI	ACGGA	2 cut(s)	481, 1145
TspRI	CASTG	4 cut(s)	159, 210, 1567, 1582
Van91I	CCANNNNNTGG	1 cut(s)	1618
Vha464I	CTTAAG	2 cut(s)	475, 713
VpaK11BI	GGWCC	1 cut(s)	1165
XceI	RCATGY	2 cut(s)	866, 1223
XspI	CTAG	7 cut(s)	78, 317, 914, 1331, 1353, 1542, 1905
Zsp2I	ATGCAT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.