Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0005992

Physical Location & Seq

Genomic Coordinates Reverse (-)

22515630 .. 22522234

Gene Structure 6605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG144700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGCAACTTATTATACTAATTCAAATAATCAAAAGGACGGTACGCCAATGCTCTATTCAAGGGAACCTTTAACTAGTTCATATCCAGAAACACCCGTTCTTCCTGGTAACATGATGATGTATATGAACTCGGGGTCATACTCGGATGCATTAGCTGGGAGTTCTCAGCAGCAAAACAACTGCATTGAAGTCGTTTCCTCAGTGGGGGCTTCGGATTCCAATACACAACAGCAGGATGTCTTATCACATCTTGGTGGCTCACGTACTGGAGAGCAAGGATTCAATGCATGGAGAGATAGTAGAAATGAGATGCTAGTTACGAATCCGATGGATGGTTCTGCAGCTATTCTTCATGGTGGACAGAACTTGCAAGGCCAGGGATTGTCCCTCAGCCTCTCATCAGGAATGCAAGTGCCTTCTATGTCATACCGGAATCCCAATATGGGTTTTGCTTCATTCTTAAGTCCTAATCCATCACTCTCAAGTGAGGGCAGGAATGGCACTTTCAGAGATGACCAGCCAAGAAATGTCGAATATTTGCAACCTAGTTTTCTTGGAGGCAATGCGGATTCAAGTAAAGGGGATTTGTCTCCATATGGGATGTCGAGTATTGCAAGGAACGTTCCCAATTCCAAGTATCTGAAAGCAGCACAACAACTGCTCGATGAAGTTGTCAACGTCCAGAAAGCACTGAAGCAGCATGACAGGGAGAAGAACGAAAGCACAAATGAGCATATGATGAAGAGTTTCAAGGAGGGTGATGATGGTTCAAAGAATGAGCTTGAAAGTGGAGAATCTTCAAACCCCCAAGAGTCCGCCAGTAATTCATCGTGTGAGCTTTCACATGCTGAGAAACAAGAGTTGCAAAACAAGCTGACTAAGCTTCTGTCTATGTTAGATGAGGTTGATAGAAGGTACAAACACTATTATCAGCAGATGCAGATTGTGGTATCATCATTTGATGCGATAGCAGGAAGTGGGGCAGCTAAACCATACACAGCAGTTGCTCTTCAAACAATTTCTCGCCACTTTCGATGCTTACGTGATGCAATCACAGGCCAGATACGAGCAACCCAAAAAAGCCTTGGGGAGCAAGGTACTTCAGGAAGCATTAAAGGGGTTGGAATTACTCGCCTCCGTTTCGTGGATCAGCAGCTCAGGCAGCAGAGAGCCCTTCAGCAGCTTGGTATGATGCAACAACATGCATGGAGGCCACAAAGAGGTCTGCCAGAAAGTTCTGTTTCGATTCTGCGAGCATGGCTGTTTGAGCATTTCCTTCATCCCTATCCCAAGGATTCTGATAAGATCATGCTAGCAAGGCAGACAGGCTTGACCAGAAGTCAGGTCTCAAACTGGTTTATAAATGCACGGGTGCGTCTCTGGAAACCCATGGTTGAGGAGATGTACAAAGAAGAGGCTGGTGATGCTGAAATGGACTCTAATTCTTCATCTGAAAATGCACCCCAAACCAAAAAAGGTGAGAAGAGGACCTTGGAAGACGGAGGGGAAGATATGCAGCCTAGTGCAAGTTCCACAGGCACTGATAGATGCAGCACGGGACAATTTATGGACTCCAAACCTGATCATTATGATGTGGAAATGGCTGGATCCACTGGGTCTGCCAGCTTCCAAAATGGGACTCGTCGTGAAGCTGAAGCTGAATTTGGGCTAGTGAAGCTTAGGCAGGGAGAAAGGCCTGGCATGGATGAAAGTAGTTTCTTTACTGATGGAATGGTTCAGTCTGATAGGAGCAGCGAAAGGTTTATGGCTGCATACCACATGCGGGAGTTGGGGAGGTTTGGAAGTGGAAGCGGCGTGTCTCTAACATTGGGGTTGCAGCATTGTGATGGTGGTAACATTCCTATCTCTAGTGGGACTCCTCACAGTTTTGTTGCCATGAGAGATGATGATTTGTACAATGCAGCAGCGTCTTCCGTTGGGTCAGAGACCGCAGATTTCGACCAGCAGCACAGATTTGGTTCCTCCCATCTATTACGCGATTTCGTAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

670

Amino Acids

73.77

Weight (kDa)

5.67

Isoelectric Point (pI)

45.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	208 - 352	6.2e-51	Associated with HOX
Homeobox_KN	PF05920	420 - 459	3.2e-19	Homeobox KN domain
Homeodomain	PF00046	427 - 459	1.9e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16400
fragaria_vesca	FvH4_2g09770 FvH4_2g09770 FvH4_2g09770
malus_domestica	MD05G1059800.v1.1 MD10G1068000.v1.1
prunus_persica	Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1
pyrus_communis	pycom05g05110 pycom05g05120 pycom10g05380
rosa_chinensis	RchiOBHm_Chr6g0266091 RchiOBHm_Chr6g0266111
rosa_laevigata	RLG00000014115
rosa_multiflora	Rmu_co8443717.1_g000001 Rmu_sc0004324.1_g000004
rosa_roxburghii	Rroxscaffold_174G00435200 Rroxscaffold_7G00201970
rosa_rugosa	Rorug06G0023900 Rorug06G0024000 Rorug06G0024100
rosa_samantha	Rh6AG144700 Rh6BG145100 Rh6CG141800 Rh6DG129400
rosa_wichuraiana	Rw6G012490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1361
AccII	CGCG	1 cut(s)	1998
AciI	CCGC	5 cut(s)	566, 816, 1783, 1812, 1950
AclI	AACGTT	1 cut(s)	621
AclWI	GGATC	3 cut(s)	1155, 1602, 1615
AcsI	RAATTY	1 cut(s)	1661
AcuI	CTGAAG	4 cut(s)	713, 1086, 1160, 1674
AfaI	GTAC	6 cut(s)	43, 265, 917, 1099, 1406, 1916
AfiI	CCNNNNNNNGG	6 cut(s)	204, 332, 443, 1144, 1220, 1783
AflII	CTTAAG	1 cut(s)	460
AhdI	GACNNNNNGTC	1 cut(s)	1338
AhlI	ACTAGT	1 cut(s)	74
AjnI	CCWGG	3 cut(s)	103, 375, 1696
AjuI	GAANNNNNNNTTGG	6 cut(s)	40, 72, 1475, 1507, 1647, 1679
Alw26I	GTCTC	5 cut(s)	594, 1351, 1382, 1824, 1940
AlwI	GGATC	3 cut(s)	1155, 1602, 1615
AlwNI	CAGNNNCTG	1 cut(s)	1541
Ama87I	CYCGRG	1 cut(s)	130
AoxI	GGCC	4 cut(s)	373, 1057, 1211, 1694
ApoI	RAATTY	1 cut(s)	1661
Asp700I	GAANNNNTTC	1 cut(s)	746
AspS9I	GGNCC	1 cut(s)	1488
AsuHPI	GGTGA	3 cut(s)	770, 1433, 1490
AsuNHI	GCTAGC	1 cut(s)	1312
AvaI	CYCGRG	1 cut(s)	130
AvaII	GGWCC	1 cut(s)	1488
BamHI	GGATCC	1 cut(s)	1607
BanII	GRGCYC	1 cut(s)	1174
BbsI	GAAGAC	2 cut(s)	1503, 1923
BbvCI	CCTCAGC	1 cut(s)	389
BccI	CCATC	7 cut(s)	322, 326, 481, 758, 1721, 1841, 1995
BcgI	CGANNNNNNTGC	2 cut(s)	172, 206
BciT130I	CCWGG	3 cut(s)	105, 377, 1698
BclI	TGATCA	1 cut(s)	1582
BcoDI	GTCTC	5 cut(s)	594, 1351, 1382, 1824, 1940
BcuI	ACTAGT	1 cut(s)	74
BfaI	CTAG	7 cut(s)	75, 314, 546, 1313, 1521, 1670, 1869
BfmI	CTRYAG	1 cut(s)	339
BfrI	CTTAAG	1 cut(s)	460
Bme1390I	CCNGG	3 cut(s)	105, 377, 1698
Bme18I	GGWCC	1 cut(s)	1488
BmeRI	GACNNNNNGTC	1 cut(s)	1338
BmeT110I	CYCGRG	1 cut(s)	130
BmgT120I	GGNCC	1 cut(s)	1488
BmiI	GGNNCC	3 cut(s)	66, 1609, 1981
BmrFI	CCNGG	3 cut(s)	105, 377, 1698
BmrI	ACTGGG	1 cut(s)	1623
BmsI	GCATC	9 cut(s)	136, 300, 927, 952, 1025, 1036, 1182, 1414, 1538
BmtI	GCTAGC	1 cut(s)	1316
BmuI	ACTGGG	1 cut(s)	1623
BpiI	GAAGAC	2 cut(s)	1503, 1923
BpmI	CTGGAG	1 cut(s)	288
Bpu10I	CCTNAGC	3 cut(s)	389, 1157, 1679
BpuEI	CTTGAG	1 cut(s)	466
BsaAI	YACGTR	2 cut(s)	263, 1043
BsaI	GGTCTC	2 cut(s)	1351, 1940
BsaJI	CCNNGG	5 cut(s)	376, 1084, 1290, 1389, 1491
BsaWI	WCCGGW	1 cut(s)	429
BsaXI	ACNNNNNCTCC	2 cut(s)	283, 313
Bsc4I	CCNNNNNNNGG	6 cut(s)	204, 332, 443, 1144, 1220, 1783
Bse1I	ACTGG	4 cut(s)	271, 819, 1358, 1618
Bse3DI	GCAATG	1 cut(s)	568
BseBI	CCWGG	3 cut(s)	105, 377, 1698
BseDI	CCNNGG	5 cut(s)	376, 1084, 1290, 1389, 1491
BseGI	GGATG	6 cut(s)	151, 241, 337, 606, 1279, 1711
BseLI	CCNNNNNNNGG	6 cut(s)	204, 332, 443, 1144, 1220, 1783
BseMI	GCAATG	1 cut(s)	568
BseMII	CTCAG	5 cut(s)	179, 213, 403, 840, 1171
BseNI	ACTGG	4 cut(s)	271, 819, 1358, 1618
BseRI	GAGGAG	2 cut(s)	1412, 1869
BseYI	CCCAGC	1 cut(s)	155
Bsh1236I	CGCG	1 cut(s)	1998
BshFI	GGCC	4 cut(s)	375, 1059, 1213, 1696
BsiHKCI	CYCGRG	1 cut(s)	130
BsiSI	CCGG	1 cut(s)	430
BslFI	GGGAC	4 cut(s)	370, 1572, 1651, 1888
BslI	CCNNNNNNNGG	6 cut(s)	204, 332, 443, 1144, 1220, 1783
BsmAI	GTCTC	5 cut(s)	594, 1351, 1382, 1824, 1940
BsmBI	CGTCTC	1 cut(s)	1382
BsmFI	GGGAC	4 cut(s)	370, 1572, 1651, 1888
BsmI	GAATGC	1 cut(s)	411
BsnI	GGCC	4 cut(s)	375, 1059, 1213, 1696
Bso31I	GGTCTC	2 cut(s)	1351, 1940
BsoBI	CYCGRG	1 cut(s)	130
Bsp1286I	GDGCHC	1 cut(s)	1174
Bsp1407I	TGTACA	2 cut(s)	1404, 1914
Bsp143I	GATC	4 cut(s)	1147, 1305, 1582, 1607
Bsp19I	CCATGG	1 cut(s)	1389
BspACI	CCGC	5 cut(s)	566, 816, 1783, 1812, 1950
BspANI	GGCC	4 cut(s)	375, 1059, 1213, 1696
BspCNI	CTCAG	5 cut(s)	178, 212, 402, 841, 1170
BspFNI	CGCG	1 cut(s)	1998
BspLI	GGNNCC	3 cut(s)	66, 1609, 1981
BspMAI	CTGCAG	1 cut(s)	343
BspOI	GCTAGC	1 cut(s)	1316
BspPI	GGATC	3 cut(s)	1155, 1602, 1615
BspQI	GCTCTTC	1 cut(s)	1014
BspTI	CTTAAG	1 cut(s)	460
BspTNI	GGTCTC	2 cut(s)	1351, 1940
BsrDI	GCAATG	1 cut(s)	568
BsrGI	TGTACA	2 cut(s)	1404, 1914
BsrI	ACTGG	4 cut(s)	271, 819, 1358, 1618
BssECI	CCNNGG	5 cut(s)	376, 1084, 1290, 1389, 1491
BssMI	GATC	4 cut(s)	1147, 1305, 1582, 1607
BssT1I	CCWWGG	4 cut(s)	1084, 1290, 1389, 1491
Bst2UI	CCWGG	3 cut(s)	105, 377, 1698
Bst4CI	ACNGT	2 cut(s)	41, 1886
Bst6I	CTCTTC	4 cut(s)	737, 1014, 1407, 1478
BstAFI	CTTAAG	1 cut(s)	460
BstAUI	TGTACA	2 cut(s)	1404, 1914
BstBAI	YACGTR	2 cut(s)	263, 1043
BstC8I	GCNNGC	3 cut(s)	1254, 1314, 1624
BstDEI	CTNAG	7 cut(s)	165, 199, 389, 849, 879, 1157, 1679
BstDSI	CCRYGG	1 cut(s)	1389
BstF5I	GGATG	6 cut(s)	151, 241, 337, 606, 1279, 1711
BstFNI	CGCG	1 cut(s)	1998
BstKTI	GATC	4 cut(s)	1150, 1308, 1585, 1610
BstMAI	GTCTC	5 cut(s)	594, 1351, 1382, 1824, 1940
BstMBI	GATC	4 cut(s)	1147, 1305, 1582, 1607
BstNI	CCWGG	3 cut(s)	105, 377, 1698
BstNSI	RCATGY	3 cut(s)	848, 1205, 1783
BstSCI	CCNGG	3 cut(s)	103, 375, 1696
BstSFI	CTRYAG	1 cut(s)	339
BstUI	CGCG	1 cut(s)	1998
BstV2I	GAAGAC	2 cut(s)	1503, 1923
BstX2I	RGATCY	1 cut(s)	1607
BstYI	RGATCY	1 cut(s)	1607
BsuRI	GGCC	4 cut(s)	375, 1059, 1213, 1696
BtgI	CCRYGG	1 cut(s)	1389
BtsCI	GGATG	6 cut(s)	151, 241, 337, 606, 1279, 1711
BtsIMutI	CAGTG	4 cut(s)	207, 689, 1539, 1611
Cac8I	GCNNGC	3 cut(s)	1254, 1314, 1624
CaiI	CAGNNNCTG	1 cut(s)	1541
Cfr13I	GGNCC	1 cut(s)	1488
CseI	GACGC	2 cut(s)	1364, 1917
Csp6I	GTAC	6 cut(s)	42, 264, 916, 1098, 1405, 1915
CviQI	GTAC	6 cut(s)	42, 264, 916, 1098, 1405, 1915
DdeI	CTNAG	7 cut(s)	165, 199, 389, 849, 879, 1157, 1679
DpnI	GATC	4 cut(s)	1149, 1307, 1584, 1609
DpnII	GATC	4 cut(s)	1147, 1305, 1582, 1607
DriI	GACNNNNNGTC	1 cut(s)	1338
Eam1104I	CTCTTC	4 cut(s)	737, 1014, 1407, 1478
Eam1105I	GACNNNNNGTC	1 cut(s)	1338
EarI	CTCTTC	4 cut(s)	737, 1014, 1407, 1478
EciI	GGCGGA	1 cut(s)	805
Eco130I	CCWWGG	4 cut(s)	1084, 1290, 1389, 1491
Eco147I	AGGCCT	1 cut(s)	1696
Eco24I	GRGCYC	1 cut(s)	1174
Eco31I	GGTCTC	2 cut(s)	1351, 1940
Eco47I	GGWCC	1 cut(s)	1488
Eco57I	CTGAAG	4 cut(s)	713, 1086, 1160, 1674
Eco88I	CYCGRG	1 cut(s)	130
EcoO109I	RGGNCCY	1 cut(s)	1488
EcoRII	CCWGG	3 cut(s)	103, 375, 1696
EcoT14I	CCWWGG	4 cut(s)	1084, 1290, 1389, 1491
EcoT22I	ATGCAT	3 cut(s)	151, 289, 1207
EcoT38I	GRGCYC	1 cut(s)	1174
ErhI	CCWWGG	4 cut(s)	1084, 1290, 1389, 1491
Esp3I	CGTCTC	1 cut(s)	1382
FalI	AAGNNNNNCTT	4 cut(s)	52, 84, 1475, 1507
FaqI	GGGAC	4 cut(s)	370, 1572, 1651, 1888
FauI	CCCGC	1 cut(s)	1776
FauNDI	CATATG	2 cut(s)	595, 735
FbaI	TGATCA	1 cut(s)	1582
FokI	GGATG	6 cut(s)	158, 248, 344, 613, 1266, 1718
FriOI	GRGCYC	1 cut(s)	1174
FspBI	CTAG	7 cut(s)	75, 314, 546, 1313, 1521, 1670, 1869
GsaI	CCCAGC	1 cut(s)	159
GsuI	CTGGAG	1 cut(s)	288
HaeIII	GGCC	4 cut(s)	375, 1059, 1213, 1696
HapII	CCGG	1 cut(s)	430
HgaI	GACGC	2 cut(s)	1364, 1917
HincII	GTYRAC	1 cut(s)	676
HindII	GTYRAC	1 cut(s)	676
HindIII	AAGCTT	2 cut(s)	881, 1676
HpaII	CCGG	1 cut(s)	430
HphI	GGTGA	3 cut(s)	770, 1433, 1490
Hpy166II	GTNNAC	2 cut(s)	359, 676
Hpy188I	TCNGA	9 cut(s)	145, 214, 327, 509, 642, 1300, 1453, 1744, 1945
Hpy188III	TCNNGA	6 cut(s)	86, 402, 682, 1104, 1381, 1646
Hpy8I	GTNNAC	2 cut(s)	359, 676
Hpy99I	CGWCG	1 cut(s)	1647
HpyAV	CCTTC	4 cut(s)	426, 906, 1184, 1286
HpyCH4III	ACNGT	2 cut(s)	41, 1886
HpyCH4IV	ACGT	4 cut(s)	262, 621, 678, 1042
HpyF3I	CTNAG	7 cut(s)	165, 199, 389, 849, 879, 1157, 1679
HpySE526I	ACGT	4 cut(s)	262, 621, 678, 1042
Ksp22I	TGATCA	1 cut(s)	1582
Kzo9I	GATC	4 cut(s)	1147, 1305, 1582, 1607
LguI	GCTCTTC	1 cut(s)	1014
LmnI	GCTCC	2 cut(s)	1090, 1749
LweI	GCATC	9 cut(s)	136, 300, 927, 952, 1025, 1036, 1182, 1414, 1538
MaeI	CTAG	7 cut(s)	75, 314, 546, 1313, 1521, 1670, 1869
MaeII	ACGT	4 cut(s)	262, 621, 678, 1042
MaeIII	GTNAC	3 cut(s)	107, 316, 1853
MalI	GATC	4 cut(s)	1149, 1307, 1584, 1609
MboI	GATC	4 cut(s)	1147, 1305, 1582, 1607
MflI	RGATCY	1 cut(s)	1607
MhlI	GDGCHC	1 cut(s)	1174
MluCI	AATT	8 cut(s)	19, 628, 823, 1017, 1125, 1441, 1562, 1661
MlyI	GAGTC	5 cut(s)	821, 1430, 1565, 1633, 1870
MmeI	TCCRAC	1 cut(s)	1102
Mph1103I	ATGCAT	3 cut(s)	151, 289, 1207
MroXI	GAANNNNTTC	1 cut(s)	746
MseI	TTAA	3 cut(s)	71, 461, 1113
MslI	CAYNNNNRTG	4 cut(s)	116, 252, 1590, 1845
MspCI	CTTAAG	1 cut(s)	460
MspI	CCGG	1 cut(s)	430
MspR9I	CCNGG	3 cut(s)	105, 377, 1698
Mva1269I	GAATGC	1 cut(s)	411
MvaI	CCWGG	3 cut(s)	105, 377, 1698
MvnI	CGCG	1 cut(s)	1998
NcoI	CCATGG	1 cut(s)	1389
NdeI	CATATG	2 cut(s)	595, 735
NdeII	GATC	4 cut(s)	1147, 1305, 1582, 1607
NheI	GCTAGC	1 cut(s)	1312
NlaIV	GGNNCC	3 cut(s)	66, 1609, 1981
NsiI	ATGCAT	3 cut(s)	151, 289, 1207
NspI	RCATGY	3 cut(s)	848, 1205, 1783
PceI	AGGCCT	1 cut(s)	1696
PciSI	GCTCTTC	1 cut(s)	1014
PcsI	WCGNNNNNNNCGW	2 cut(s)	1030, 1039
PctI	GAATGC	1 cut(s)	411
PdmI	GAANNNNTTC	1 cut(s)	746
PfeI	GAWTC	8 cut(s)	215, 279, 322, 433, 569, 794, 1246, 1295
PleI	GAGTC	5 cut(s)	820, 1430, 1565, 1633, 1870
PpsI	GAGTC	5 cut(s)	820, 1430, 1565, 1633, 1870
Ppu21I	YACGTR	2 cut(s)	263, 1043
PpuMI	RGGWCCY	1 cut(s)	1488
PsiI	TTATAA	1 cut(s)	1361
Psp1406I	AACGTT	1 cut(s)	621
Psp5II	RGGWCCY	1 cut(s)	1488
Psp6I	CCWGG	3 cut(s)	103, 375, 1696
PspFI	CCCAGC	1 cut(s)	155
PspGI	CCWGG	3 cut(s)	103, 375, 1696
PspN4I	GGNNCC	3 cut(s)	66, 1609, 1981
PspPI	GGNCC	1 cut(s)	1488
PspPPI	RGGWCCY	1 cut(s)	1488
PstI	CTGCAG	1 cut(s)	343
PstNI	CAGNNNCTG	1 cut(s)	1541
PsuI	RGATCY	1 cut(s)	1607
RsaI	GTAC	6 cut(s)	43, 265, 917, 1099, 1406, 1916
RsaNI	GTAC	6 cut(s)	42, 264, 916, 1098, 1405, 1915
RseI	CAYNNNNRTG	4 cut(s)	116, 252, 1590, 1845
SapI	GCTCTTC	1 cut(s)	1014
SaqAI	TTAA	3 cut(s)	71, 461, 1113
Sau3AI	GATC	4 cut(s)	1147, 1305, 1582, 1607
Sau96I	GGNCC	1 cut(s)	1488
SchI	GAGTC	5 cut(s)	821, 1430, 1565, 1633, 1870
ScrFI	CCNGG	3 cut(s)	105, 377, 1698
SduI	GDGCHC	1 cut(s)	1174
SfaNI	GCATC	9 cut(s)	136, 300, 927, 952, 1025, 1036, 1182, 1414, 1538
SfcI	CTRYAG	1 cut(s)	339
SinI	GGWCC	1 cut(s)	1488
SmiMI	CAYNNNNRTG	4 cut(s)	116, 252, 1590, 1845
SmlI	CTYRAG	2 cut(s)	460, 481
SmoI	CTYRAG	2 cut(s)	460, 481
SpeI	ACTAGT	1 cut(s)	74
Sse9I	AATT	8 cut(s)	19, 628, 823, 1017, 1125, 1441, 1562, 1661
SseBI	AGGCCT	1 cut(s)	1696
SsiI	CCGC	5 cut(s)	566, 816, 1783, 1812, 1950
SspI	AATATT	1 cut(s)	536
SspMI	CTAG	7 cut(s)	75, 314, 546, 1313, 1521, 1670, 1869
StuI	AGGCCT	1 cut(s)	1696
StyD4I	CCNGG	3 cut(s)	103, 375, 1696
StyI	CCWWGG	4 cut(s)	1084, 1290, 1389, 1491
TaaI	ACNGT	2 cut(s)	41, 1886
TaiI	ACGT	4 cut(s)	265, 624, 681, 1045
TaqI	TCGA	6 cut(s)	531, 605, 663, 1033, 1244, 1959
TasI	AATT	8 cut(s)	19, 628, 823, 1017, 1125, 1441, 1562, 1661
TatI	WGTACW	2 cut(s)	1404, 1914
TauI	GCSGC	1 cut(s)	1815
TfiI	GAWTC	8 cut(s)	215, 279, 322, 433, 569, 794, 1246, 1295
Tru1I	TTAA	3 cut(s)	71, 461, 1113
Tru9I	TTAA	3 cut(s)	71, 461, 1113
TscAI	CASTG	4 cut(s)	207, 696, 1546, 1618
TspGWI	ACGGA	3 cut(s)	1127, 1515, 1924
TspRI	CASTG	4 cut(s)	207, 696, 1546, 1618
Vha464I	CTTAAG	1 cut(s)	460
VpaK11BI	GGWCC	1 cut(s)	1488
XapI	RAATTY	1 cut(s)	1661
XceI	RCATGY	3 cut(s)	848, 1205, 1783
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1082
XmnI	GAANNNNTTC	1 cut(s)	746
XspI	CTAG	7 cut(s)	75, 314, 546, 1313, 1521, 1670, 1869
Zsp2I	ATGCAT	3 cut(s)	151, 289, 1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.