Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0005992

Physical Location & Seq

Genomic Coordinates Reverse (-)

18377834 .. 18385052

Gene Structure 7219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG141800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGATTGCAAAGAAGAGAGAGAGAGCGAGAGAGAGCAAAAGTGAAAAAACTCCCAAGTCCCTTTTTGAATTATTACTCTTTCACTTGTTTTGTTGGGCAGAAAATACTCTGTTTCTTTGGTTGAATAAAAGACTTGTTCTTGGGATCGGAAAGTGTTTGGTTCCGAGAGGACTCTGTTTAAGCGATCGGGTGTTGTTCTCTAAGACTGACTTTCCTGTTCCCCCCAAACATCCCACAACTGTTACAGGTTTCCAGTTTTTTTGGGTTGGGTATGTGATCTGTGTCAATACAACTGGGCGAGAAGATTTCAAAGTTGAGACAAATATGGCAACTTATTATACTAATTCAAATAATCAAAAGGACGGTACGCCAATGCTCTATTCAAGGGAACCTTTAACTAGTTCATATCCAGAAACACCTGTTCTTCCTGGTAACATGATGATGTATATGAACTCGGGGTCATACTCGGATGCATTAGCTGGGAGTTCTCAGCAGCAAAACAACTGCATTGAAGTCGTTTCCTCAGTGGGGGCTTCGGATTCCAATACACAACAGCAGGATGTCTTATCACATCTTGGTGGCTCACGTATTGGAGAGCAAGGATTCAATGCATGGAGAGATAGTAGAAATGAGATGCTAGTTACGAATCCGATGGATGGTTCTTCAGCTATTCTTCATGGTGGACAGAACTTGCAAGGCCAGGGATTGTCCCTCAGCCTCTCATCAGGAATGCAAGTGCCTTCTATGTCATACCGGAATCCCAATATGGGTTTTGCTTCATTCTTAAGTCCTAATCCATCACTGTCAAGTGAGGGCAGGAATGGCACTTTCAGAGATGACCAGCCAAGAAATGTTGAATATTTGCAACCTAGTTTTCTTGGAGGCAATGTGGATTCAAGTAAAGGGGATTTGTCTCCATATGGGATGTCGAGTATTGCAAGGAACGTTCCCAATTCCAAGTATCTGAAAGCAGCACAACAACTGCTCGATGAAGTTGTCAACGTCCAGAAAGCACTGAAGCAGCGTGACAGGGAGAAGAACGAAAGCACAAATGAGCATATGATGAAGAGTTTCAAGGAGGGTGATGATGGTTCAAAGAATGAGCTTGAAAGTGGAGAATCTTCAAACCCCCAAGAGTCCGCCAGTAATTCATCGTGTGAGCTTTCACATGCTGAGAAACAAGAGTTGCAAAACAAGCTGACTAAGCTTCTGTCTATGTTAGATGAGGTCGATAGAAGGTACAAACACTATTATCAGCAGATGCAGATTGTGGTATCATCATTTGATGCGATAGCAGGAAGTGGGGCAGCTAAACCATACACAGCAGTTGCTCTTCAAACAATTTCTCGCCACTTTCGATGCTTACGTGATGCAATCACAGGCCAGATACGAGCAACCCAAAAAAGCCTTGGGGAGCAAGGTACTTCAGGAAGCATTAAAGGGGTTGGAATTACTCGCCTCCGTTTCGTGGATCAGCAGCTCAGGCAGCAGAGAGCCCTTCAGCAGCTTGGTATGATGCAACAACATGCATGGAGGCCACAAAGAGGTCTGCCAGAAAGTTCTGTTTCGATTCTGCGAGCATGGCTGTTTGAGCATTTCCTTCATCCCTATCCCAAGGATTCTGATAAGATCATGCTAGCAAGGCAGACAGGCTTGACCAGAAGTCAGGTCTCAAACTGGTTTATAAATGCACGGGTGCGTCTCTGGAAACCCATGGTTGAGGAGATGTACAAAGAAGAGGCTGGTGATGCTGAAATGGACTCTAATTCTTCATCTGAAAATGCACCCCAAACCAAAAAAGGTGAGAAGAGGACCTTGGAAGACGGAGGGGAAGATATGCAGCCTAGTGCAAGTTCCACAGGCACTGATAGATGCAGCACGGGACAATTTATGGACTCCAAACCTGATCATTATGATGTGGAAATGGCTGGATCCACTGGGTCTGCCAGCTTCCAAAATGGGACTCGTCGTGAAGCTGAAGCTGAATTTGGGCTAGTGAAGCTTAGGCAGGGAGAAAGGCCTGGCATGGATGAAAGTAGTTTCTTTACTGATGGAATGGTTCAGTCTGATAGGAGCAGCGAAAGGTTTATGGCTGCATACCACATGCGGGAGTTGGGGAGGTTTGGAAGTGGAAGCGGCGTGTCTCTAACATTGGGGTTGCAGCATTGTGATGGTGGTAACATTCCTATCTCTAGTGGGACTCCTCACAGTTTTGTTGCCATGAGAGATGATGATTTGTACAATGCAGCAGCGTCTTCCGTTGGGTCAGAGACCGCAGATTTCGACCAGCAGCACAGATTTGGTTCCTCCCATCTATTACGCGATTTCGTAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

778

Amino Acids

86.36

Weight (kDa)

6.32

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	316 - 460	8.2e-51	Associated with HOX
Homeobox_KN	PF05920	528 - 567	3.8e-19	Homeobox KN domain
Homeodomain	PF00046	535 - 567	2.3e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16400
fragaria_vesca	FvH4_2g09770 FvH4_2g09770 FvH4_2g09770
malus_domestica	MD05G1059800.v1.1 MD10G1068000.v1.1
prunus_persica	Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1 Prupe.8G089800_v2.0.a1
pyrus_communis	pycom05g05110 pycom05g05120 pycom10g05380
rosa_chinensis	RchiOBHm_Chr6g0266091 RchiOBHm_Chr6g0266111
rosa_laevigata	RLG00000014115
rosa_multiflora	Rmu_co8443717.1_g000001 Rmu_sc0004324.1_g000004
rosa_roxburghii	Rroxscaffold_174G00435200 Rroxscaffold_7G00201970
rosa_rugosa	Rorug06G0023900 Rorug06G0024000 Rorug06G0024100
rosa_samantha	Rh6AG144700 Rh6BG145100 Rh6CG141800 Rh6DG129400
rosa_wichuraiana	Rw6G012490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1685
AccII	CGCG	1 cut(s)	2322
AciI	CCGC	4 cut(s)	1140, 2107, 2136, 2274
AclI	AACGTT	1 cut(s)	945
AclWI	GGATC	4 cut(s)	152, 1479, 1926, 1939
AcsI	RAATTY	1 cut(s)	1985
AcuI	CTGAAG	5 cut(s)	648, 1037, 1410, 1484, 1998
AfaI	GTAC	5 cut(s)	367, 1241, 1423, 1730, 2240
AfiI	CCNNNNNNNGG	6 cut(s)	528, 656, 767, 1468, 1544, 2107
AflII	CTTAAG	1 cut(s)	784
AhdI	GACNNNNNGTC	1 cut(s)	1662
AhlI	ACTAGT	1 cut(s)	398
AjnI	CCWGG	3 cut(s)	427, 699, 2020
AjuI	GAANNNNNNNTTGG	6 cut(s)	364, 396, 1799, 1831, 1971, 2003
Alw26I	GTCTC	6 cut(s)	311, 918, 1675, 1706, 2148, 2264
AlwI	GGATC	4 cut(s)	152, 1479, 1926, 1939
AlwNI	CAGNNNCTG	1 cut(s)	1865
Ama87I	CYCGRG	1 cut(s)	454
AoxI	GGCC	4 cut(s)	697, 1381, 1535, 2018
ApoI	RAATTY	1 cut(s)	1985
Asp700I	GAANNNNTTC	1 cut(s)	1070
AspS9I	GGNCC	1 cut(s)	1812
AsuHPI	GGTGA	3 cut(s)	1094, 1757, 1814
AsuNHI	GCTAGC	1 cut(s)	1636
AvaI	CYCGRG	1 cut(s)	454
AvaII	GGWCC	1 cut(s)	1812
BamHI	GGATCC	1 cut(s)	1931
BanII	GRGCYC	1 cut(s)	1498
BbsI	GAAGAC	2 cut(s)	1827, 2247
BbvCI	CCTCAGC	1 cut(s)	713
BccI	CCATC	7 cut(s)	646, 650, 805, 1082, 2045, 2165, 2319
BcgI	CGANNNNNNTGC	2 cut(s)	496, 530
BciT130I	CCWGG	3 cut(s)	429, 701, 2022
BclI	TGATCA	1 cut(s)	1906
BcoDI	GTCTC	6 cut(s)	311, 918, 1675, 1706, 2148, 2264
BcuI	ACTAGT	1 cut(s)	398
BfaI	CTAG	7 cut(s)	399, 638, 870, 1637, 1845, 1994, 2193
BfrI	CTTAAG	1 cut(s)	784
Bme1390I	CCNGG	3 cut(s)	429, 701, 2022
Bme18I	GGWCC	1 cut(s)	1812
BmeRI	GACNNNNNGTC	1 cut(s)	1662
BmeT110I	CYCGRG	1 cut(s)	454
BmgT120I	GGNCC	1 cut(s)	1812
BmiI	GGNNCC	4 cut(s)	162, 390, 1933, 2305
BmrFI	CCNGG	3 cut(s)	429, 701, 2022
BmrI	ACTGGG	2 cut(s)	303, 1947
BmsI	GCATC	9 cut(s)	460, 624, 1251, 1276, 1349, 1360, 1506, 1738, 1862
BmtI	GCTAGC	1 cut(s)	1640
BmuI	ACTGGG	2 cut(s)	303, 1947
BpiI	GAAGAC	2 cut(s)	1827, 2247
Bpu10I	CCTNAGC	3 cut(s)	713, 1481, 2003
BsaAI	YACGTR	2 cut(s)	587, 1367
BsaI	GGTCTC	2 cut(s)	1675, 2264
BsaJI	CCNNGG	5 cut(s)	700, 1408, 1614, 1713, 1815
BsaWI	WCCGGW	1 cut(s)	753
BsaXI	ACNNNNNCTCC	4 cut(s)	607, 637, 873, 903
Bsc4I	CCNNNNNNNGG	6 cut(s)	528, 656, 767, 1468, 1544, 2107
Bse1I	ACTGG	5 cut(s)	253, 298, 1143, 1682, 1942
Bse3DI	GCAATG	1 cut(s)	892
BseBI	CCWGG	3 cut(s)	429, 701, 2022
BseDI	CCNNGG	5 cut(s)	700, 1408, 1614, 1713, 1815
BseGI	GGATG	7 cut(s)	229, 475, 565, 661, 930, 1603, 2035
BseLI	CCNNNNNNNGG	6 cut(s)	528, 656, 767, 1468, 1544, 2107
BseMI	GCAATG	1 cut(s)	892
BseMII	CTCAG	5 cut(s)	503, 537, 727, 1164, 1495
BseNI	ACTGG	5 cut(s)	253, 298, 1143, 1682, 1942
BseRI	GAGGAG	2 cut(s)	1736, 2193
BseYI	CCCAGC	1 cut(s)	479
Bsh1236I	CGCG	1 cut(s)	2322
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	4 cut(s)	699, 1383, 1537, 2020
BsiEI	CGRYCG	1 cut(s)	187
BsiHKCI	CYCGRG	1 cut(s)	454
BsiSI	CCGG	1 cut(s)	754
BslFI	GGGAC	5 cut(s)	43, 694, 1896, 1975, 2212
BslI	CCNNNNNNNGG	6 cut(s)	528, 656, 767, 1468, 1544, 2107
BsmAI	GTCTC	6 cut(s)	311, 918, 1675, 1706, 2148, 2264
BsmBI	CGTCTC	1 cut(s)	1706
BsmFI	GGGAC	5 cut(s)	43, 694, 1896, 1975, 2212
BsmI	GAATGC	1 cut(s)	735
BsnI	GGCC	4 cut(s)	699, 1383, 1537, 2020
Bso31I	GGTCTC	2 cut(s)	1675, 2264
BsoBI	CYCGRG	1 cut(s)	454
Bsp1286I	GDGCHC	1 cut(s)	1498
Bsp1407I	TGTACA	2 cut(s)	1728, 2238
Bsp143I	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
Bsp19I	CCATGG	1 cut(s)	1713
BspACI	CCGC	4 cut(s)	1140, 2107, 2136, 2274
BspANI	GGCC	4 cut(s)	699, 1383, 1537, 2020
BspCNI	CTCAG	5 cut(s)	502, 536, 726, 1165, 1494
BspFNI	CGCG	1 cut(s)	2322
BspLI	GGNNCC	4 cut(s)	162, 390, 1933, 2305
BspOI	GCTAGC	1 cut(s)	1640
BspPI	GGATC	4 cut(s)	152, 1479, 1926, 1939
BspQI	GCTCTTC	1 cut(s)	1338
BspTI	CTTAAG	1 cut(s)	784
BspTNI	GGTCTC	2 cut(s)	1675, 2264
BsrDI	GCAATG	1 cut(s)	892
BsrGI	TGTACA	2 cut(s)	1728, 2238
BsrI	ACTGG	5 cut(s)	253, 298, 1143, 1682, 1942
BssECI	CCNNGG	5 cut(s)	700, 1408, 1614, 1713, 1815
BssMI	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
BssT1I	CCWWGG	4 cut(s)	1408, 1614, 1713, 1815
Bst2UI	CCWGG	3 cut(s)	429, 701, 2022
Bst4CI	ACNGT	4 cut(s)	241, 365, 804, 2210
Bst6I	CTCTTC	5 cut(s)	8, 1061, 1338, 1731, 1802
BstAFI	CTTAAG	1 cut(s)	784
BstAUI	TGTACA	2 cut(s)	1728, 2238
BstBAI	YACGTR	2 cut(s)	587, 1367
BstC8I	GCNNGC	3 cut(s)	1578, 1638, 1948
BstDEI	CTNAG	8 cut(s)	201, 489, 523, 713, 1173, 1203, 1481, 2003
BstDSI	CCRYGG	1 cut(s)	1713
BstF5I	GGATG	7 cut(s)	229, 475, 565, 661, 930, 1603, 2035
BstFNI	CGCG	1 cut(s)	2322
BstKTI	GATC	7 cut(s)	147, 187, 279, 1474, 1632, 1909, 1934
BstMAI	GTCTC	6 cut(s)	311, 918, 1675, 1706, 2148, 2264
BstMBI	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
BstMCI	CGRYCG	1 cut(s)	187
BstNI	CCWGG	3 cut(s)	429, 701, 2022
BstNSI	RCATGY	3 cut(s)	1172, 1529, 2107
BstSCI	CCNGG	3 cut(s)	427, 699, 2020
BstUI	CGCG	1 cut(s)	2322
BstV2I	GAAGAC	2 cut(s)	1827, 2247
BstX2I	RGATCY	1 cut(s)	1931
BstYI	RGATCY	1 cut(s)	1931
BsuRI	GGCC	4 cut(s)	699, 1383, 1537, 2020
BtgI	CCRYGG	1 cut(s)	1713
BtsCI	GGATG	7 cut(s)	229, 475, 565, 661, 930, 1603, 2035
BtsIMutI	CAGTG	5 cut(s)	531, 800, 1013, 1863, 1935
Cac8I	GCNNGC	3 cut(s)	1578, 1638, 1948
CaiI	CAGNNNCTG	1 cut(s)	1865
Cfr13I	GGNCC	1 cut(s)	1812
CseI	GACGC	2 cut(s)	1688, 2241
Csp6I	GTAC	5 cut(s)	366, 1240, 1422, 1729, 2239
CviQI	GTAC	5 cut(s)	366, 1240, 1422, 1729, 2239
DdeI	CTNAG	8 cut(s)	201, 489, 523, 713, 1173, 1203, 1481, 2003
DpnI	GATC	7 cut(s)	146, 186, 278, 1473, 1631, 1908, 1933
DpnII	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
DriI	GACNNNNNGTC	1 cut(s)	1662
Eam1104I	CTCTTC	5 cut(s)	8, 1061, 1338, 1731, 1802
Eam1105I	GACNNNNNGTC	1 cut(s)	1662
EarI	CTCTTC	5 cut(s)	8, 1061, 1338, 1731, 1802
EciI	GGCGGA	1 cut(s)	1129
Eco130I	CCWWGG	4 cut(s)	1408, 1614, 1713, 1815
Eco147I	AGGCCT	1 cut(s)	2020
Eco24I	GRGCYC	1 cut(s)	1498
Eco31I	GGTCTC	2 cut(s)	1675, 2264
Eco47I	GGWCC	1 cut(s)	1812
Eco57I	CTGAAG	5 cut(s)	648, 1037, 1410, 1484, 1998
Eco88I	CYCGRG	1 cut(s)	454
EcoO109I	RGGNCCY	1 cut(s)	1812
EcoRII	CCWGG	3 cut(s)	427, 699, 2020
EcoT14I	CCWWGG	4 cut(s)	1408, 1614, 1713, 1815
EcoT22I	ATGCAT	3 cut(s)	475, 613, 1531
EcoT38I	GRGCYC	1 cut(s)	1498
ErhI	CCWWGG	4 cut(s)	1408, 1614, 1713, 1815
Esp3I	CGTCTC	1 cut(s)	1706
FalI	AAGNNNNNCTT	6 cut(s)	194, 226, 376, 408, 1799, 1831
FaqI	GGGAC	5 cut(s)	43, 694, 1896, 1975, 2212
FauI	CCCGC	1 cut(s)	2100
FauNDI	CATATG	2 cut(s)	919, 1059
FbaI	TGATCA	1 cut(s)	1906
FokI	GGATG	7 cut(s)	216, 482, 572, 668, 937, 1590, 2042
FriOI	GRGCYC	1 cut(s)	1498
FspBI	CTAG	7 cut(s)	399, 638, 870, 1637, 1845, 1994, 2193
GsaI	CCCAGC	1 cut(s)	483
HaeIII	GGCC	4 cut(s)	699, 1383, 1537, 2020
HapII	CCGG	1 cut(s)	754
HgaI	GACGC	2 cut(s)	1688, 2241
HincII	GTYRAC	1 cut(s)	1000
HindII	GTYRAC	1 cut(s)	1000
HindIII	AAGCTT	2 cut(s)	1205, 2000
HpaII	CCGG	1 cut(s)	754
HphI	GGTGA	3 cut(s)	1094, 1757, 1814
Hpy166II	GTNNAC	2 cut(s)	683, 1000
Hpy188III	TCNNGA	6 cut(s)	410, 726, 1006, 1428, 1705, 1970
Hpy8I	GTNNAC	2 cut(s)	683, 1000
Hpy99I	CGWCG	1 cut(s)	1971
HpyAV	CCTTC	4 cut(s)	750, 1230, 1508, 1610
HpyCH4III	ACNGT	4 cut(s)	241, 365, 804, 2210
HpyCH4IV	ACGT	4 cut(s)	586, 945, 1002, 1366
HpyF3I	CTNAG	8 cut(s)	201, 489, 523, 713, 1173, 1203, 1481, 2003
HpySE526I	ACGT	4 cut(s)	586, 945, 1002, 1366
Ksp22I	TGATCA	1 cut(s)	1906
Kzo9I	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
LguI	GCTCTTC	1 cut(s)	1338
LmnI	GCTCC	2 cut(s)	1414, 2073
LweI	GCATC	9 cut(s)	460, 624, 1251, 1276, 1349, 1360, 1506, 1738, 1862
MaeI	CTAG	7 cut(s)	399, 638, 870, 1637, 1845, 1994, 2193
MaeII	ACGT	4 cut(s)	586, 945, 1002, 1366
MaeIII	GTNAC	5 cut(s)	241, 431, 640, 1025, 2177
MalI	GATC	7 cut(s)	146, 186, 278, 1473, 1631, 1908, 1933
MboI	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
MflI	RGATCY	1 cut(s)	1931
MhlI	GDGCHC	1 cut(s)	1498
MluCI	AATT	9 cut(s)	68, 343, 952, 1147, 1341, 1449, 1765, 1886, 1985
MlyI	GAGTC	6 cut(s)	165, 1145, 1754, 1889, 1957, 2194
MmeI	TCCRAC	1 cut(s)	1426
Mph1103I	ATGCAT	3 cut(s)	475, 613, 1531
MroXI	GAANNNNTTC	1 cut(s)	1070
MseI	TTAA	4 cut(s)	179, 395, 785, 1437
MslI	CAYNNNNRTG	4 cut(s)	440, 576, 1914, 2169
MspCI	CTTAAG	1 cut(s)	784
MspI	CCGG	1 cut(s)	754
MspR9I	CCNGG	3 cut(s)	429, 701, 2022
Mva1269I	GAATGC	1 cut(s)	735
MvaI	CCWGG	3 cut(s)	429, 701, 2022
MvnI	CGCG	1 cut(s)	2322
NcoI	CCATGG	1 cut(s)	1713
NdeI	CATATG	2 cut(s)	919, 1059
NdeII	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
NheI	GCTAGC	1 cut(s)	1636
NlaIV	GGNNCC	4 cut(s)	162, 390, 1933, 2305
NmuCI	GTSAC	1 cut(s)	1025
NsiI	ATGCAT	3 cut(s)	475, 613, 1531
NspI	RCATGY	3 cut(s)	1172, 1529, 2107
PceI	AGGCCT	1 cut(s)	2020
PciSI	GCTCTTC	1 cut(s)	1338
PcsI	WCGNNNNNNNCGW	2 cut(s)	1354, 1363
PctI	GAATGC	1 cut(s)	735
PdmI	GAANNNNTTC	1 cut(s)	1070
PfeI	GAWTC	8 cut(s)	539, 603, 646, 757, 893, 1118, 1570, 1619
Ple19I	CGATCG	1 cut(s)	187
PleI	GAGTC	6 cut(s)	165, 1144, 1754, 1889, 1957, 2194
PpsI	GAGTC	6 cut(s)	165, 1144, 1754, 1889, 1957, 2194
Ppu21I	YACGTR	2 cut(s)	587, 1367
PpuMI	RGGWCCY	1 cut(s)	1812
PsiI	TTATAA	1 cut(s)	1685
Psp1406I	AACGTT	1 cut(s)	945
Psp5II	RGGWCCY	1 cut(s)	1812
Psp6I	CCWGG	3 cut(s)	427, 699, 2020
PspFI	CCCAGC	1 cut(s)	479
PspGI	CCWGG	3 cut(s)	427, 699, 2020
PspN4I	GGNNCC	4 cut(s)	162, 390, 1933, 2305
PspPI	GGNCC	1 cut(s)	1812
PspPPI	RGGWCCY	1 cut(s)	1812
PstNI	CAGNNNCTG	1 cut(s)	1865
PsuI	RGATCY	1 cut(s)	1931
PvuI	CGATCG	1 cut(s)	187
RsaI	GTAC	5 cut(s)	367, 1241, 1423, 1730, 2240
RsaNI	GTAC	5 cut(s)	366, 1240, 1422, 1729, 2239
RseI	CAYNNNNRTG	4 cut(s)	440, 576, 1914, 2169
SapI	GCTCTTC	1 cut(s)	1338
SaqAI	TTAA	4 cut(s)	179, 395, 785, 1437
Sau3AI	GATC	7 cut(s)	144, 184, 276, 1471, 1629, 1906, 1931
Sau96I	GGNCC	1 cut(s)	1812
SchI	GAGTC	6 cut(s)	165, 1145, 1754, 1889, 1957, 2194
ScrFI	CCNGG	3 cut(s)	429, 701, 2022
SduI	GDGCHC	1 cut(s)	1498
SfaNI	GCATC	9 cut(s)	460, 624, 1251, 1276, 1349, 1360, 1506, 1738, 1862
SinI	GGWCC	1 cut(s)	1812
SmiMI	CAYNNNNRTG	4 cut(s)	440, 576, 1914, 2169
SmlI	CTYRAG	1 cut(s)	784
SmoI	CTYRAG	1 cut(s)	784
SpeI	ACTAGT	1 cut(s)	398
Sse9I	AATT	9 cut(s)	68, 343, 952, 1147, 1341, 1449, 1765, 1886, 1985
SseBI	AGGCCT	1 cut(s)	2020
SsiI	CCGC	4 cut(s)	1140, 2107, 2136, 2274
SspI	AATATT	1 cut(s)	860
SspMI	CTAG	7 cut(s)	399, 638, 870, 1637, 1845, 1994, 2193
StuI	AGGCCT	1 cut(s)	2020
StyD4I	CCNGG	3 cut(s)	427, 699, 2020
StyI	CCWWGG	4 cut(s)	1408, 1614, 1713, 1815
TaaI	ACNGT	4 cut(s)	241, 365, 804, 2210
TaiI	ACGT	4 cut(s)	589, 948, 1005, 1369
TaqI	TCGA	6 cut(s)	929, 987, 1230, 1357, 1568, 2283
TasI	AATT	9 cut(s)	68, 343, 952, 1147, 1341, 1449, 1765, 1886, 1985
TatI	WGTACW	2 cut(s)	1728, 2238
TauI	GCSGC	1 cut(s)	2139
TfiI	GAWTC	8 cut(s)	539, 603, 646, 757, 893, 1118, 1570, 1619
Tru1I	TTAA	4 cut(s)	179, 395, 785, 1437
Tru9I	TTAA	4 cut(s)	179, 395, 785, 1437
TscAI	CASTG	5 cut(s)	531, 807, 1020, 1870, 1942
TseFI	GTSAC	1 cut(s)	1025
Tsp45I	GTSAC	1 cut(s)	1025
TspGWI	ACGGA	3 cut(s)	1451, 1839, 2248
TspRI	CASTG	5 cut(s)	531, 807, 1020, 1870, 1942
Vha464I	CTTAAG	1 cut(s)	784
VpaK11BI	GGWCC	1 cut(s)	1812
XapI	RAATTY	1 cut(s)	1985
XceI	RCATGY	3 cut(s)	1172, 1529, 2107
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1406
XmnI	GAANNNNTTC	1 cut(s)	1070
XspI	CTAG	7 cut(s)	399, 638, 870, 1637, 1845, 1994, 2193
Zsp2I	ATGCAT	3 cut(s)	475, 613, 1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.